Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056534.t1 | XP_013446281.1 | 97.8 | 269 | 6 | 0 | 1 | 269 | 1 | 269 | 9.70E-148 | 532.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056534.t1 | Q3T130 | 29.6 | 206 | 138 | 2 | 1 | 206 | 1 | 199 | 9.3e-14 | 79.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056534.t1 | A0A072TTZ7 | 97.8 | 269 | 6 | 0 | 1 | 269 | 1 | 269 | 7.0e-148 | 532.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056534 | MS.gene062713 | 0.803038 | 4.22E-49 | -1.69E-46 |
| MS.gene056534 | MS.gene83425 | 0.906165 | 1.98E-80 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056534.t1 | MTR_8g071150 | 97.770 | 269 | 6 | 0 | 1 | 269 | 1 | 269 | 0.0 | 533 |
| MS.gene056534.t1 | MTR_5g027180 | 73.485 | 264 | 70 | 0 | 1 | 264 | 1 | 264 | 1.08e-148 | 417 |
| MS.gene056534.t1 | MTR_8g071140 | 73.828 | 256 | 67 | 0 | 14 | 269 | 111 | 366 | 3.85e-141 | 401 |
| MS.gene056534.t1 | MTR_4g068340 | 32.157 | 255 | 154 | 5 | 1 | 244 | 1 | 247 | 4.02e-36 | 130 |
| MS.gene056534.t1 | MTR_2g021690 | 30.682 | 264 | 160 | 8 | 1 | 254 | 1 | 251 | 4.48e-34 | 125 |
| MS.gene056534.t1 | MTR_1g112160 | 31.551 | 187 | 122 | 3 | 82 | 262 | 26 | 212 | 5.65e-25 | 100 |
| MS.gene056534.t1 | MTR_1g112150 | 28.163 | 245 | 149 | 7 | 6 | 237 | 6 | 236 | 1.76e-20 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056534.t1 | AT1G32127 | 70.881 | 261 | 76 | 0 | 1 | 261 | 1 | 261 | 5.67e-136 | 384 |
| MS.gene056534.t1 | AT1G32127 | 70.881 | 261 | 76 | 0 | 1 | 261 | 1 | 261 | 5.67e-136 | 384 |
| MS.gene056534.t1 | AT1G55240 | 35.510 | 245 | 146 | 5 | 1 | 237 | 1 | 241 | 2.46e-48 | 162 |
| MS.gene056534.t1 | AT1G55230 | 31.837 | 245 | 155 | 5 | 1 | 237 | 1 | 241 | 2.48e-43 | 149 |
| MS.gene056534.t1 | AT5G19870 | 30.488 | 246 | 156 | 6 | 1 | 237 | 1 | 240 | 4.87e-34 | 124 |
| MS.gene056534.t1 | AT1G49470 | 32.955 | 264 | 148 | 7 | 1 | 245 | 1 | 254 | 1.09e-33 | 124 |
Find 63 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTCATCTTATTATTAAT+TGG | 0.103762 | 8.3:+31307753 | None:intergenic |
| TATTTCTTCTTGTTGGAGTA+TGG | 0.270558 | 8.3:-31309470 | MS.gene056534:CDS |
| GGAACCTTATTTCTTCTTGT+TGG | 0.290898 | 8.3:-31309477 | MS.gene056534:CDS |
| GGATTTGCAGCTTCAAGATA+TGG | 0.293962 | 8.3:-31307796 | MS.gene056534:CDS |
| TGCCAGAAGGTGCTCTTTGT+TGG | 0.316256 | 8.3:-31308197 | MS.gene056534:CDS |
| CCAGATTCCTTGCAGTGTTA+TGG | 0.333794 | 8.3:+31307993 | None:intergenic |
| TACTCCAACAAGAAGAAATA+AGG | 0.343384 | 8.3:+31309473 | None:intergenic |
| GGACATGATAATAGCCTTCT+AGG | 0.345352 | 8.3:+31308109 | None:intergenic |
| GCTCGAACTTGGAATGTCTT+AGG | 0.362458 | 8.3:+31309411 | None:intergenic |
| TTGTTGGAGTATGGCATATA+TGG | 0.364293 | 8.3:-31309461 | MS.gene056534:CDS |
| GTCCTCCTCGCCTTCCTGAT+TGG | 0.367650 | 8.3:-31308090 | MS.gene056534:CDS |
| TCTTCATCTTATTATTAATT+GGG | 0.367825 | 8.3:+31307754 | None:intergenic |
| GTAGGAACTATAGCTTCCTT+TGG | 0.382282 | 8.3:-31307817 | MS.gene056534:CDS |
| CCATAACACTGCAAGGAATC+TGG | 0.398310 | 8.3:-31307993 | MS.gene056534:CDS |
| TGAAGGACGGCTCAAGTACT+TGG | 0.407163 | 8.3:-31309367 | MS.gene056534:CDS |
| CTCAAAGTTATTCAAGTAAG+TGG | 0.407532 | 8.3:+31309248 | None:intergenic |
| ACAAGAAGAAATAAGGTTCC+AGG | 0.414770 | 8.3:+31309480 | None:intergenic |
| TTTCCCAGTCGATTTATGTA+AGG | 0.418927 | 8.3:-31308022 | MS.gene056534:CDS |
| ACTACTCACAGAGGCCTAGA+AGG | 0.420676 | 8.3:-31308123 | MS.gene056534:CDS |
| GAACTCTATGTTATTTCAGT+TGG | 0.425596 | 8.3:-31309345 | MS.gene056534:CDS |
| ATCCAACAAAGAGCACCTTC+TGG | 0.440213 | 8.3:+31308195 | None:intergenic |
| CAGGGTTCCAAGCTCGAACT+TGG | 0.443497 | 8.3:+31309400 | None:intergenic |
| CGTCCTTCAAATCCCGGTAC+AGG | 0.449912 | 8.3:+31309381 | None:intergenic |
| TGGGAAACATGTCGGTAAAA+CGG | 0.451333 | 8.3:+31308038 | None:intergenic |
| AACCCTGTACCGGGATTTGA+AGG | 0.463413 | 8.3:-31309384 | MS.gene056534:CDS |
| GCTGTCCTTGCTGTTCATGT+AGG | 0.470553 | 8.3:-31307835 | MS.gene056534:CDS |
| AGACATTCCAAGTTCGAGCT+TGG | 0.474473 | 8.3:-31309407 | MS.gene056534:CDS |
| ATAAAATACAAAGACCAATC+AGG | 0.477833 | 8.3:+31308076 | None:intergenic |
| GATTTGCAGCTTCAAGATAT+GGG | 0.478619 | 8.3:-31307795 | MS.gene056534:CDS |
| ATTGTCCTTCATGCTACAAC+CGG | 0.496771 | 8.3:+31307927 | None:intergenic |
| TCGAGCTTGGAACCCTGTAC+CGG | 0.503496 | 8.3:-31309394 | MS.gene056534:CDS |
| ATGCCCTTACATAAATCGAC+TGG | 0.514730 | 8.3:+31308018 | None:intergenic |
| TTCCCAGTCGATTTATGTAA+GGG | 0.527584 | 8.3:-31308021 | MS.gene056534:CDS |
| TTGAATAACTTTGAGCACTC+AGG | 0.530890 | 8.3:-31309240 | MS.gene056534:CDS |
| CGAGCTTGGAACCCTGTACC+GGG | 0.537732 | 8.3:-31309393 | MS.gene056534:CDS |
| ACAAAGAGCACCTTCTGGCA+AGG | 0.545375 | 8.3:+31308200 | None:intergenic |
| CCCTGCTCTCAGAAAAGACA+AGG | 0.556320 | 8.3:-31309182 | MS.gene056534:intron |
| TTTGGCCCTATGCTACCGTC+CGG | 0.562144 | 8.3:-31307946 | MS.gene056534:CDS |
| ACATGTCGGTAAAACGGCTC+CGG | 0.564188 | 8.3:+31308044 | None:intergenic |
| CAAAGAGCACCTTCTGGCAA+GGG | 0.567003 | 8.3:+31308201 | None:intergenic |
| CTACAACCGGACGGTAGCAT+AGG | 0.567441 | 8.3:+31307940 | None:intergenic |
| TTGAGCCGTCCTTCAAATCC+CGG | 0.569317 | 8.3:+31309375 | None:intergenic |
| TCGAAGGAGAGTGAGGTTCG+TGG | 0.586812 | 8.3:-31307889 | MS.gene056534:CDS |
| ACCGTCCGGTTGTAGCATGA+AGG | 0.596841 | 8.3:-31307932 | MS.gene056534:CDS |
| GGCATTGCCATAACACTGCA+AGG | 0.598058 | 8.3:-31308000 | MS.gene056534:CDS |
| TGTTGTTACATGTCATTCGA+AGG | 0.601468 | 8.3:-31307905 | MS.gene056534:CDS |
| GTCCTTCAAATCCCGGTACA+GGG | 0.603842 | 8.3:+31309382 | None:intergenic |
| TACAACCGGACGGTAGCATA+GGG | 0.608425 | 8.3:+31307941 | None:intergenic |
| AGATATATTCCCTTGCCAGA+AGG | 0.617393 | 8.3:-31308210 | MS.gene056534:CDS |
| TCTTGAAGCTGCAAATCCAA+AGG | 0.618524 | 8.3:+31307801 | None:intergenic |
| AAATCGACTGGGAAACATGT+CGG | 0.624423 | 8.3:+31308030 | None:intergenic |
| ATGTCATTCGAAGGAGAGTG+AGG | 0.625750 | 8.3:-31307896 | MS.gene056534:CDS |
| CTGTACCGGGATTTGAAGGA+CGG | 0.627212 | 8.3:-31309380 | MS.gene056534:CDS |
| TGCCCTTACATAAATCGACT+GGG | 0.628576 | 8.3:+31308019 | None:intergenic |
| GACCAATCAGGAAGGCGAGG+AGG | 0.633883 | 8.3:+31308088 | None:intergenic |
| AAAGACCAATCAGGAAGGCG+AGG | 0.635504 | 8.3:+31308085 | None:intergenic |
| TCCTTCATGCTACAACCGGA+CGG | 0.644939 | 8.3:+31307931 | None:intergenic |
| AATACAAAGACCAATCAGGA+AGG | 0.661377 | 8.3:+31308080 | None:intergenic |
| ATACTCTGCAGTGAATGCTG+TGG | 0.693297 | 8.3:+31308167 | None:intergenic |
| AGGGCCAAAGAGAACAAAAG+CGG | 0.695971 | 8.3:+31307960 | None:intergenic |
| TAGTTCCTACATGAACAGCA+AGG | 0.707671 | 8.3:+31307830 | None:intergenic |
| TTTCATTCAACTACTCACAG+AGG | 0.714436 | 8.3:-31308132 | MS.gene056534:CDS |
| ATGGCATATATGGTGCTCTG+TGG | 0.727328 | 8.3:-31309451 | MS.gene056534:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTTTTCCATTTTTTAT+TGG | + | chr8.3:31308515-31308534 | None:intergenic | 10.0% |
| !! | AAAATATATAACCAAGTTTA+AGG | + | chr8.3:31308796-31308815 | None:intergenic | 15.0% |
| !! | AAATAAATAACCATAGCTTA+AGG | + | chr8.3:31309018-31309037 | None:intergenic | 20.0% |
| !! | AATAAACTAAGACTTAGTAA+AGG | + | chr8.3:31308443-31308462 | None:intergenic | 20.0% |
| !! | ATAATGCATGTGTTTAAATT+AGG | + | chr8.3:31308651-31308670 | None:intergenic | 20.0% |
| !! | ATGTTATTCTACATGTTATT+TGG | - | chr8.3:31308167-31308186 | MS.gene056534:CDS | 20.0% |
| !! | TTGTAATTGCCAATAAAAAA+TGG | - | chr8.3:31308503-31308522 | MS.gene056534:intron | 20.0% |
| !! | TTTACTAAGTCTTAGTTTAT+TGG | - | chr8.3:31308442-31308461 | MS.gene056534:intron | 20.0% |
| !!! | TATATATTTTCCATCTCTAA+GGG | - | chr8.3:31308806-31308825 | MS.gene056534:intron | 20.0% |
| !!! | TGTTATTCTACATGTTATTT+GGG | - | chr8.3:31308168-31308187 | MS.gene056534:CDS | 20.0% |
| !!! | TTATATATTTTCCATCTCTA+AGG | - | chr8.3:31308805-31308824 | MS.gene056534:intron | 20.0% |
| !!! | TTTATTTTATCCTTAAGCTA+TGG | - | chr8.3:31309005-31309024 | MS.gene056534:intron | 20.0% |
| ! | ACAGAATAAGATCAAATTAG+AGG | + | chr8.3:31309045-31309064 | None:intergenic | 25.0% |
| ! | ACAGTAAACAATATAAACTC+AGG | + | chr8.3:31308247-31308266 | None:intergenic | 25.0% |
| ! | AGAATAACATCATTAGTAGT+AGG | + | chr8.3:31308157-31308176 | None:intergenic | 25.0% |
| ! | ATAAAATACAAAGACCAATC+AGG | + | chr8.3:31309202-31309221 | None:intergenic | 25.0% |
| ! | CTTATTTCCATTAACACTTA+AGG | - | chr8.3:31308937-31308956 | MS.gene056534:intron | 25.0% |
| ! | TAAACACATGCATTATGTAA+TGG | - | chr8.3:31308655-31308674 | MS.gene056534:intron | 25.0% |
| ! | TATATTGTTTACTGTCTTCA+AGG | - | chr8.3:31308252-31308271 | MS.gene056534:intron | 25.0% |
| ! | TGTTATTCAGATAATGATCA+AGG | + | chr8.3:31308587-31308606 | None:intergenic | 25.0% |
| !! | GCTTATTTGAGTTTATCTAT+TGG | - | chr8.3:31308842-31308861 | MS.gene056534:intron | 25.0% |
| !! | GTTATTCTACATGTTATTTG+GGG | - | chr8.3:31308169-31308188 | MS.gene056534:CDS | 25.0% |
| !! | TGTATTTTATCTTCAATTGC+CGG | - | chr8.3:31309212-31309231 | MS.gene056534:CDS | 25.0% |
| !!! | TTTAGTTTTGAGTAAACACA+AGG | - | chr8.3:31308472-31308491 | MS.gene056534:intron | 25.0% |
| AAGCTATCCTTAAGTGTTAA+TGG | + | chr8.3:31308947-31308966 | None:intergenic | 30.0% | |
| AATGATCAAGGAAGTGAAAA+TGG | + | chr8.3:31308575-31308594 | None:intergenic | 30.0% | |
| ACCAAGTTTAAGGACAAAAA+TGG | + | chr8.3:31308786-31308805 | None:intergenic | 30.0% | |
| ATGTGATAATACACACACTT+AGG | - | chr8.3:31308326-31308345 | MS.gene056534:intron | 30.0% | |
| CTCAAAGTTATTCAAGTAAG+TGG | + | chr8.3:31308030-31308049 | None:intergenic | 30.0% | |
| CTCAAATAAGCTTATGCAAA+CGG | + | chr8.3:31308833-31308852 | None:intergenic | 30.0% | |
| TACTCCAACAAGAAGAAATA+AGG | + | chr8.3:31307805-31307824 | None:intergenic | 30.0% | |
| TATTTCTTCTTGTTGGAGTA+TGG | - | chr8.3:31307805-31307824 | MS.gene056534:CDS | 30.0% | |
| TCAAATAAGCTTATGCAAAC+GGG | + | chr8.3:31308832-31308851 | None:intergenic | 30.0% | |
| TGAAAATGGAAAAGAAGGAA+AGG | + | chr8.3:31308561-31308580 | None:intergenic | 30.0% | |
| TTAGTAGTAGGTTGTGTTTA+AGG | + | chr8.3:31308145-31308164 | None:intergenic | 30.0% | |
| !! | CTTCTGATGTTTTTGATCTT+CGG | - | chr8.3:31308062-31308081 | MS.gene056534:CDS | 30.0% |
| !! | GAACTCTATGTTATTTCAGT+TGG | - | chr8.3:31307930-31307949 | MS.gene056534:CDS | 30.0% |
| !!! | ACACAACTGAAGTTTTTTGT+TGG | - | chr8.3:31307990-31308009 | MS.gene056534:CDS | 30.0% |
| AAGTGGAGTGTACAAATTCT+TGG | - | chr8.3:31308291-31308310 | MS.gene056534:intron | 35.0% | |
| AATACAAAGACCAATCAGGA+AGG | + | chr8.3:31309198-31309217 | None:intergenic | 35.0% | |
| ACAAGAAGAAATAAGGTTCC+AGG | + | chr8.3:31307798-31307817 | None:intergenic | 35.0% | |
| AGTGGAGTGTACAAATTCTT+GGG | - | chr8.3:31308292-31308311 | MS.gene056534:intron | 35.0% | |
| ATGCATACTTCATGCACATT+AGG | - | chr8.3:31308388-31308407 | MS.gene056534:intron | 35.0% | |
| ATGGAAAAGAAGGAAAGGAT+CGG | + | chr8.3:31308556-31308575 | None:intergenic | 35.0% | |
| GATTTGCAGCTTCAAGATAT+GGG | - | chr8.3:31309480-31309499 | MS.gene056534:CDS | 35.0% | |
| GGAAGTGAAAATGGAAAAGA+AGG | + | chr8.3:31308566-31308585 | None:intergenic | 35.0% | |
| TGCATACTTCATGCACATTA+GGG | - | chr8.3:31308389-31308408 | MS.gene056534:intron | 35.0% | |
| TGTTGTTACATGTCATTCGA+AGG | - | chr8.3:31309370-31309389 | MS.gene056534:CDS | 35.0% | |
| TTGAATAACTTTGAGCACTC+AGG | - | chr8.3:31308035-31308054 | MS.gene056534:CDS | 35.0% | |
| TTGTTGGAGTATGGCATATA+TGG | - | chr8.3:31307814-31307833 | MS.gene056534:CDS | 35.0% | |
| TTTCATTCAACTACTCACAG+AGG | - | chr8.3:31309143-31309162 | MS.gene056534:intron | 35.0% | |
| TTTGGGGAAAATAGATGCTA+TGG | - | chr8.3:31308185-31308204 | MS.gene056534:CDS | 35.0% | |
| ! | AAGCACTTGTTAGACTGTTT+GGG | - | chr8.3:31308868-31308887 | MS.gene056534:intron | 35.0% |
| ! | GAGATGGTAATGCTTATAAG+TGG | - | chr8.3:31308274-31308293 | MS.gene056534:intron | 35.0% |
| ! | GGAACCTTATTTCTTCTTGT+TGG | - | chr8.3:31307798-31307817 | MS.gene056534:CDS | 35.0% |
| ! | TAAGCACTTGTTAGACTGTT+TGG | - | chr8.3:31308867-31308886 | MS.gene056534:intron | 35.0% |
| ! | TTCATAGGTCATATTTTGCC+TGG | - | chr8.3:31307777-31307796 | MS.gene056534:CDS | 35.0% |
| ! | TTCCCAGTCGATTTATGTAA+GGG | - | chr8.3:31309254-31309273 | MS.gene056534:CDS | 35.0% |
| ! | TTTCCCAGTCGATTTATGTA+AGG | - | chr8.3:31309253-31309272 | MS.gene056534:CDS | 35.0% |
| !!! | CAACTGAAGTTTTTTGTTGG+TGG | - | chr8.3:31307993-31308012 | MS.gene056534:CDS | 35.0% |
| !!! | GCCATTTTTGTCCTTAAACT+TGG | - | chr8.3:31308782-31308801 | MS.gene056534:intron | 35.0% |
| AAATCGACTGGGAAACATGT+CGG | + | chr8.3:31309248-31309267 | None:intergenic | 40.0% | |
| AGATATATTCCCTTGCCAGA+AGG | - | chr8.3:31309065-31309084 | MS.gene056534:intron | 40.0% | |
| ATGCCCTTACATAAATCGAC+TGG | + | chr8.3:31309260-31309279 | None:intergenic | 40.0% | |
| ATTGTCCTTCATGCTACAAC+CGG | + | chr8.3:31309351-31309370 | None:intergenic | 40.0% | |
| CTCTCAGAAAAGACAAGGTT+AGG | - | chr8.3:31308098-31308117 | MS.gene056534:CDS | 40.0% | |
| GGACATGATAATAGCCTTCT+AGG | + | chr8.3:31309169-31309188 | None:intergenic | 40.0% | |
| GGATTTGCAGCTTCAAGATA+TGG | - | chr8.3:31309479-31309498 | MS.gene056534:CDS | 40.0% | |
| GTAGGAACTATAGCTTCCTT+TGG | - | chr8.3:31309458-31309477 | MS.gene056534:CDS | 40.0% | |
| GTTTACTGTCTTCAAGGAGA+TGG | - | chr8.3:31308258-31308277 | MS.gene056534:intron | 40.0% | |
| TAGTTCCTACATGAACAGCA+AGG | + | chr8.3:31309448-31309467 | None:intergenic | 40.0% | |
| TCTTGAAGCTGCAAATCCAA+AGG | + | chr8.3:31309477-31309496 | None:intergenic | 40.0% | |
| TGCCCTTACATAAATCGACT+GGG | + | chr8.3:31309259-31309278 | None:intergenic | 40.0% | |
| TGGGAAACATGTCGGTAAAA+CGG | + | chr8.3:31309240-31309259 | None:intergenic | 40.0% | |
| !! | AGGTGTTGTTGTTATGTTCC+TGG | - | chr8.3:31308118-31308137 | MS.gene056534:CDS | 40.0% |
| AATACCTCACCACTCTCATG+AGG | - | chr8.3:31308359-31308378 | MS.gene056534:intron | 45.0% | |
| AGACATTCCAAGTTCGAGCT+TGG | - | chr8.3:31307868-31307887 | MS.gene056534:CDS | 45.0% | |
| AGACTGTTTGGGAGAGCTTA+TGG | - | chr8.3:31308879-31308898 | MS.gene056534:intron | 45.0% | |
| AGGGCCAAAGAGAACAAAAG+CGG | + | chr8.3:31309318-31309337 | None:intergenic | 45.0% | |
| ATACTCTGCAGTGAATGCTG+TGG | + | chr8.3:31309111-31309130 | None:intergenic | 45.0% | |
| ATGGCATATATGGTGCTCTG+TGG | - | chr8.3:31307824-31307843 | MS.gene056534:CDS | 45.0% | |
| ATGTCATTCGAAGGAGAGTG+AGG | - | chr8.3:31309379-31309398 | MS.gene056534:CDS | 45.0% | |
| CATGACTTTCCTCATGAGAG+TGG | + | chr8.3:31308371-31308390 | None:intergenic | 45.0% | |
| CCAGATTCCTTGCAGTGTTA+TGG | + | chr8.3:31309285-31309304 | None:intergenic | 45.0% | |
| CCATAACACTGCAAGGAATC+TGG | - | chr8.3:31309282-31309301 | MS.gene056534:CDS | 45.0% | |
| GCTCGAACTTGGAATGTCTT+AGG | + | chr8.3:31307867-31307886 | None:intergenic | 45.0% | |
| GTAGGTTGTGTTTAAGGACC+AGG | + | chr8.3:31308139-31308158 | None:intergenic | 45.0% | |
| !! | ACCTTGTCTTTTCTGAGAGC+AGG | + | chr8.3:31308097-31308116 | None:intergenic | 45.0% |
| !! | ATCCAACAAAGAGCACCTTC+TGG | + | chr8.3:31309083-31309102 | None:intergenic | 45.0% |
| !! | CAGACCGCTTTTGTTCTCTT+TGG | - | chr8.3:31309311-31309330 | MS.gene056534:CDS | 45.0% |
| !! | CCTTGTCTTTTCTGAGAGCA+GGG | + | chr8.3:31308096-31308115 | None:intergenic | 45.0% |
| AAAGACCAATCAGGAAGGCG+AGG | + | chr8.3:31309193-31309212 | None:intergenic | 50.0% | |
| AACCCTGTACCGGGATTTGA+AGG | - | chr8.3:31307891-31307910 | MS.gene056534:CDS | 50.0% | |
| ACATGTCGGTAAAACGGCTC+CGG | + | chr8.3:31309234-31309253 | None:intergenic | 50.0% | |
| ACTACTCACAGAGGCCTAGA+AGG | - | chr8.3:31309152-31309171 | MS.gene056534:intron | 50.0% | |
| CCCTGCTCTCAGAAAAGACA+AGG | - | chr8.3:31308093-31308112 | MS.gene056534:CDS | 50.0% | |
| CTGTACCGGGATTTGAAGGA+CGG | - | chr8.3:31307895-31307914 | MS.gene056534:CDS | 50.0% | |
| CTTTCCTCATGAGAGTGGTG+AGG | + | chr8.3:31308366-31308385 | None:intergenic | 50.0% | |
| GGCATTGCCATAACACTGCA+AGG | - | chr8.3:31309275-31309294 | MS.gene056534:CDS | 50.0% | |
| GTCCTTCAAATCCCGGTACA+GGG | + | chr8.3:31307896-31307915 | None:intergenic | 50.0% | |
| TACAACCGGACGGTAGCATA+GGG | + | chr8.3:31309337-31309356 | None:intergenic | 50.0% | |
| TCCTTCATGCTACAACCGGA+CGG | + | chr8.3:31309347-31309366 | None:intergenic | 50.0% | |
| TGAAGGACGGCTCAAGTACT+TGG | - | chr8.3:31307908-31307927 | MS.gene056534:CDS | 50.0% | |
| TTGAGCCGTCCTTCAAATCC+CGG | + | chr8.3:31307903-31307922 | None:intergenic | 50.0% | |
| ! | GGAAAGGATCGGTGCTTGTT+TGG | + | chr8.3:31308545-31308564 | None:intergenic | 50.0% |
| !! | ACAAAGAGCACCTTCTGGCA+AGG | + | chr8.3:31309078-31309097 | None:intergenic | 50.0% |
| !! | CAAAGAGCACCTTCTGGCAA+GGG | + | chr8.3:31309077-31309096 | None:intergenic | 50.0% |
| !! | GCTGTCCTTGCTGTTCATGT+AGG | - | chr8.3:31309440-31309459 | MS.gene056534:CDS | 50.0% |
| !! | TGCCAGAAGGTGCTCTTTGT+TGG | - | chr8.3:31309078-31309097 | MS.gene056534:intron | 50.0% |
| ACCGTCCGGTTGTAGCATGA+AGG | - | chr8.3:31309343-31309362 | MS.gene056534:CDS | 55.0% | |
| CAGGGTTCCAAGCTCGAACT+TGG | + | chr8.3:31307878-31307897 | None:intergenic | 55.0% | |
| CGTCCTTCAAATCCCGGTAC+AGG | + | chr8.3:31307897-31307916 | None:intergenic | 55.0% | |
| CTACAACCGGACGGTAGCAT+AGG | + | chr8.3:31309338-31309357 | None:intergenic | 55.0% | |
| TCGAAGGAGAGTGAGGTTCG+TGG | - | chr8.3:31309386-31309405 | MS.gene056534:CDS | 55.0% | |
| TCGAGCTTGGAACCCTGTAC+CGG | - | chr8.3:31307881-31307900 | MS.gene056534:CDS | 55.0% | |
| TGCAAACGGGCCCTTAGAGA+TGG | + | chr8.3:31308819-31308838 | None:intergenic | 55.0% | |
| TTTGGCCCTATGCTACCGTC+CGG | - | chr8.3:31309329-31309348 | MS.gene056534:CDS | 55.0% | |
| CGAGCTTGGAACCCTGTACC+GGG | - | chr8.3:31307882-31307901 | MS.gene056534:CDS | 60.0% | |
| GACCAATCAGGAAGGCGAGG+AGG | + | chr8.3:31309190-31309209 | None:intergenic | 60.0% | |
| GTCCTCCTCGCCTTCCTGAT+TGG | - | chr8.3:31309185-31309204 | MS.gene056534:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 31307768 | 31309529 | 31307768 | ID=MS.gene056534 |
| chr8.3 | mRNA | 31307768 | 31309529 | 31307768 | ID=MS.gene056534.t1;Parent=MS.gene056534 |
| chr8.3 | exon | 31309183 | 31309529 | 31309183 | ID=MS.gene056534.t1.exon1;Parent=MS.gene056534.t1 |
| chr8.3 | CDS | 31309183 | 31309529 | 31309183 | ID=cds.MS.gene056534.t1;Parent=MS.gene056534.t1 |
| chr8.3 | exon | 31307768 | 31308230 | 31307768 | ID=MS.gene056534.t1.exon2;Parent=MS.gene056534.t1 |
| chr8.3 | CDS | 31307768 | 31308230 | 31307768 | ID=cds.MS.gene056534.t1;Parent=MS.gene056534.t1 |
| Gene Sequence |
| Protein sequence |
