Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056551.t1 | XP_003628988.1 | 98.1 | 313 | 6 | 0 | 4 | 316 | 142 | 454 | 6.50E-167 | 596.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056551.t1 | F4I9E1 | 51.7 | 315 | 118 | 6 | 4 | 317 | 137 | 418 | 2.1e-73 | 277.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056551.t1 | G7L747 | 98.1 | 313 | 6 | 0 | 4 | 316 | 142 | 454 | 4.7e-167 | 596.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056551 | MS.gene067980 | 0.963078 | 1.20E-121 | -1.69E-46 |
| MS.gene056551 | MS.gene81957 | 0.802517 | 5.40E-49 | -1.69E-46 |
| MS.gene056551 | MS.gene82957 | 0.954376 | 3.40E-112 | -1.69E-46 |
| MS.gene056551 | MS.gene83408 | 0.95911 | 4.40E-117 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056551.t1 | MTR_8g071920 | 98.083 | 313 | 6 | 0 | 4 | 316 | 142 | 454 | 0.0 | 617 |
| MS.gene056551.t1 | MTR_5g026350 | 70.159 | 315 | 90 | 3 | 4 | 317 | 101 | 412 | 1.01e-146 | 425 |
| MS.gene056551.t1 | MTR_7g083660 | 53.822 | 314 | 129 | 3 | 4 | 313 | 101 | 402 | 9.40e-91 | 281 |
| MS.gene056551.t1 | MTR_4g073690 | 28.165 | 316 | 179 | 10 | 4 | 310 | 110 | 386 | 6.01e-28 | 112 |
| MS.gene056551.t1 | MTR_4g073690 | 28.165 | 316 | 179 | 10 | 4 | 310 | 110 | 386 | 3.55e-27 | 111 |
| MS.gene056551.t1 | MTR_5g022380 | 27.445 | 317 | 186 | 9 | 4 | 317 | 108 | 383 | 1.84e-24 | 103 |
| MS.gene056551.t1 | MTR_5g022380 | 27.597 | 308 | 179 | 9 | 13 | 317 | 7 | 273 | 2.33e-23 | 99.8 |
| MS.gene056551.t1 | MTR_3g466110 | 40.800 | 125 | 67 | 4 | 3 | 126 | 101 | 219 | 1.11e-20 | 92.8 |
| MS.gene056551.t1 | MTR_3g466110 | 44.444 | 99 | 48 | 2 | 219 | 317 | 285 | 376 | 2.36e-17 | 82.8 |
| MS.gene056551.t1 | MTR_3g466040 | 38.400 | 125 | 70 | 4 | 3 | 126 | 101 | 219 | 8.20e-19 | 87.0 |
| MS.gene056551.t1 | MTR_3g466040 | 40.000 | 110 | 63 | 2 | 208 | 317 | 271 | 377 | 7.86e-14 | 72.4 |
| MS.gene056551.t1 | MTR_4g116210 | 26.774 | 310 | 181 | 11 | 17 | 307 | 121 | 403 | 4.56e-17 | 82.0 |
| MS.gene056551.t1 | MTR_2g450710 | 24.252 | 301 | 195 | 9 | 17 | 307 | 120 | 397 | 2.58e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056551.t1 | AT4G19450 | 65.723 | 318 | 99 | 3 | 4 | 316 | 101 | 413 | 7.08e-139 | 399 |
| MS.gene056551.t1 | AT4G19450 | 65.723 | 318 | 99 | 3 | 4 | 316 | 101 | 413 | 5.88e-137 | 400 |
| MS.gene056551.t1 | AT5G45275 | 66.144 | 319 | 97 | 2 | 4 | 316 | 101 | 414 | 2.37e-132 | 388 |
| MS.gene056551.t1 | AT1G31470 | 52.063 | 315 | 117 | 6 | 4 | 317 | 137 | 418 | 1.56e-79 | 253 |
| MS.gene056551.t1 | AT3G01630 | 43.042 | 309 | 134 | 5 | 13 | 317 | 126 | 396 | 4.63e-71 | 230 |
| MS.gene056551.t1 | AT3G01630 | 43.042 | 309 | 134 | 5 | 13 | 317 | 144 | 414 | 5.91e-71 | 230 |
| MS.gene056551.t1 | AT2G30300 | 32.787 | 305 | 149 | 11 | 18 | 314 | 98 | 354 | 1.07e-32 | 126 |
| MS.gene056551.t1 | AT4G34950 | 26.032 | 315 | 203 | 8 | 4 | 310 | 111 | 403 | 7.13e-29 | 116 |
| MS.gene056551.t1 | AT2G16660 | 27.010 | 311 | 186 | 8 | 4 | 310 | 109 | 382 | 1.28e-22 | 97.4 |
| MS.gene056551.t1 | AT2G16660 | 27.010 | 311 | 186 | 8 | 4 | 310 | 109 | 382 | 4.44e-22 | 97.1 |
| MS.gene056551.t1 | AT1G80530 | 27.103 | 321 | 191 | 11 | 4 | 310 | 108 | 399 | 2.93e-16 | 79.7 |
| MS.gene056551.t1 | AT2G28120 | 23.003 | 313 | 199 | 7 | 5 | 310 | 113 | 390 | 4.53e-12 | 67.0 |
Find 88 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTGCTATGAATTCTTAT+TGG | 0.222588 | 8.3:+31089868 | None:intergenic |
| AATGCAAGTGTTCGGTTAAC+TGG | 0.257319 | 8.3:-31089975 | None:intergenic |
| ATCCTCCCATTGTTTATTCC+TGG | 0.276891 | 8.3:+31090320 | MS.gene056551:CDS |
| GGCCTTTATCTCCTCTTGTT+TGG | 0.298637 | 8.3:+31090236 | MS.gene056551:CDS |
| ATATGCTGCAGCCACTTAAA+AGG | 0.309934 | 8.3:-31089908 | None:intergenic |
| TCTTGTCTATAGCAATAATC+TGG | 0.318485 | 8.3:+31090688 | MS.gene056551:CDS |
| GCATCGTATATGCTCGGGCT+TGG | 0.337481 | 8.3:+31090342 | MS.gene056551:CDS |
| TTGTCCGCAGATTAGACTTT+TGG | 0.338323 | 8.3:+31090627 | MS.gene056551:CDS |
| TCCCTCCTGATGCAGTTAAC+CGG | 0.355666 | 8.3:+31090168 | MS.gene056551:CDS |
| TTCGGCCGCTTGCTTTCAGC+TGG | 0.355741 | 8.3:+31090785 | MS.gene056551:CDS |
| GTACCATCCATTCCAGCTTC+CGG | 0.370296 | 8.3:+31090372 | MS.gene056551:CDS |
| CATTCCAGCTTCCGGGTAGA+AGG | 0.371764 | 8.3:+31090380 | MS.gene056551:CDS |
| TACCATCCATTCCAGCTTCC+GGG | 0.374160 | 8.3:+31090373 | MS.gene056551:CDS |
| AAAGGCGGTTGGCGAAGAAT+TGG | 0.382733 | 8.3:-31090137 | None:intergenic |
| TGCTATGAATTCTTATTGGC+AGG | 0.398589 | 8.3:+31089872 | None:intergenic |
| CATCGTATATGCTCGGGCTT+GGG | 0.400293 | 8.3:+31090343 | MS.gene056551:CDS |
| CGCCACAATAGTAGTATTGT+TGG | 0.404050 | 8.3:+31090461 | MS.gene056551:CDS |
| GAGATAAAGGCCAGTGAAGA+TGG | 0.425004 | 8.3:-31090225 | None:intergenic |
| AGCCAAACAAGAGGAGATAA+AGG | 0.427912 | 8.3:-31090238 | None:intergenic |
| TCGCTCACTGTGAGTTTCAA+TGG | 0.434947 | 8.3:+31089999 | MS.gene056551:CDS |
| TGGCTCATCCGCTTCTTCCA+TGG | 0.435568 | 8.3:+31090256 | MS.gene056551:CDS |
| TCAGCCCGGCTCCACTTTGG+TGG | 0.442888 | 8.3:+31090281 | MS.gene056551:CDS |
| ATTTGCAGCAAGGGTGTAAA+GGG | 0.444742 | 8.3:-31090033 | None:intergenic |
| GCTTCAGCCCGGCTCCACTT+TGG | 0.445624 | 8.3:+31090278 | MS.gene056551:CDS |
| TTCCTGGCATCGTATATGCT+CGG | 0.446310 | 8.3:+31090336 | MS.gene056551:CDS |
| CAGTTCCACCAAAGTGGAGC+CGG | 0.456901 | 8.3:-31090286 | None:intergenic |
| TAAGTGGCTGCAGCATATGC+TGG | 0.457056 | 8.3:+31089913 | MS.gene056551:CDS |
| AACTTCTTAGCCATCTTCAC+TGG | 0.457087 | 8.3:+31090215 | MS.gene056551:CDS |
| CCGCTTGCTTTCAGCTGGAC+CGG | 0.458672 | 8.3:+31090790 | MS.gene056551:CDS |
| CTAGCATTGTCAAGTGATCC+TGG | 0.465755 | 8.3:-31090580 | None:intergenic |
| GGATCCTTCTACCCGGAAGC+TGG | 0.466179 | 8.3:-31090384 | None:intergenic |
| GAGTCCCGGTTAACTGCATC+AGG | 0.466696 | 8.3:-31090173 | None:intergenic |
| CTTCTACCCGGAAGCTGGAA+TGG | 0.469851 | 8.3:-31090379 | None:intergenic |
| ATCATGAATAAGAATAATGC+TGG | 0.479379 | 8.3:-31090405 | None:intergenic |
| GCCCGAGCATATACGATGCC+AGG | 0.480604 | 8.3:-31090338 | None:intergenic |
| TCCTGGCATCGTATATGCTC+GGG | 0.483803 | 8.3:+31090337 | MS.gene056551:CDS |
| AATTTGCAGCAAGGGTGTAA+AGG | 0.488929 | 8.3:-31090034 | None:intergenic |
| AGATACAACGAGTCAGATGA+TGG | 0.502108 | 8.3:-31090065 | None:intergenic |
| AGTATTGTTGGCAATGGAGA+TGG | 0.503210 | 8.3:+31090473 | MS.gene056551:CDS |
| AGGAGAAGAGCACTCGGCTG+CGG | 0.506141 | 8.3:+31090601 | MS.gene056551:CDS |
| GGCTGAAGCCATGGAAGAAG+CGG | 0.512684 | 8.3:-31090264 | None:intergenic |
| GAATAAACAATGGGAGGATG+AGG | 0.518506 | 8.3:-31090316 | None:intergenic |
| CTTCTTCCATGGCTTCAGCC+CGG | 0.520418 | 8.3:+31090267 | MS.gene056551:CDS |
| ATAGTGATGTGTGTTGTGAT+AGG | 0.521727 | 8.3:+31090549 | MS.gene056551:CDS |
| TACTTCTGTGGAGGTACGAT+TGG | 0.521989 | 8.3:+31090665 | MS.gene056551:CDS |
| GTCTATTGAATTTGCAGCAA+GGG | 0.523964 | 8.3:-31090042 | None:intergenic |
| CCCTCCTGATGCAGTTAACC+GGG | 0.528546 | 8.3:+31090169 | MS.gene056551:CDS |
| CGATGCCAGGAATAAACAAT+GGG | 0.529124 | 8.3:-31090325 | None:intergenic |
| AATAGTAGTATTGTTGGCAA+TGG | 0.537309 | 8.3:+31090467 | MS.gene056551:CDS |
| GTGGAGCCGGGCTGAAGCCA+TGG | 0.539100 | 8.3:-31090273 | None:intergenic |
| AGTTCCACCAAAGTGGAGCC+GGG | 0.542463 | 8.3:-31090285 | None:intergenic |
| TTGTGATAGGATGATTGGCC+AGG | 0.544085 | 8.3:+31090562 | MS.gene056551:CDS |
| GGACAGATTGCTCAATCTCT+CGG | 0.544880 | 8.3:+31090710 | MS.gene056551:CDS |
| GTGTGTTGTGATAGGATGAT+TGG | 0.550219 | 8.3:+31090557 | MS.gene056551:CDS |
| TTCCTTCTGACTTGAAAACA+TGG | 0.551570 | 8.3:-31090522 | None:intergenic |
| TACCCGGAAGCTGGAATGGA+TGG | 0.554919 | 8.3:-31090375 | None:intergenic |
| CTTGTCTATAGCAATAATCT+GGG | 0.555565 | 8.3:+31090689 | MS.gene056551:CDS |
| CAGGATCACTTGACAATGCT+AGG | 0.576806 | 8.3:+31090581 | MS.gene056551:CDS |
| TGAGCGATAATGCAAGTGTT+CGG | 0.581196 | 8.3:-31089983 | None:intergenic |
| TGCCAACAATACTACTATTG+TGG | 0.582099 | 8.3:-31090463 | None:intergenic |
| AGCCACTTAAAAGGCTCAGA+AGG | 0.583900 | 8.3:-31089899 | None:intergenic |
| ACTTACCTACGAACATAGTC+CGG | 0.585793 | 8.3:-31090809 | None:intergenic |
| TCAGGAGGGAGAGGTTCTAA+AGG | 0.592174 | 8.3:-31090155 | None:intergenic |
| GAAGAACAGTTCCACCAAAG+TGG | 0.593406 | 8.3:-31090292 | None:intergenic |
| GGATGCATAGAGAGTAACAA+GGG | 0.595972 | 8.3:-31090753 | None:intergenic |
| ACGATGCCAGGAATAAACAA+TGG | 0.598651 | 8.3:-31090326 | None:intergenic |
| TTAACTGCATCAGGAGGGAG+AGG | 0.602857 | 8.3:-31090164 | None:intergenic |
| TACTACATCACATACTTCTG+TGG | 0.603312 | 8.3:+31090653 | MS.gene056551:CDS |
| GGAGAGGTTCTAAAGGCGGT+TGG | 0.603669 | 8.3:-31090148 | None:intergenic |
| AAGCGGATGAGCCAAACAAG+AGG | 0.609834 | 8.3:-31090247 | None:intergenic |
| TCCCGGTTAACTGCATCAGG+AGG | 0.613519 | 8.3:-31090170 | None:intergenic |
| CAACAATACTACTATTGTGG+CGG | 0.618920 | 8.3:-31090460 | None:intergenic |
| CGGTTGGCGAAGAATTGGAA+TGG | 0.622452 | 8.3:-31090132 | None:intergenic |
| TACATCACATACTTCTGTGG+AGG | 0.634418 | 8.3:+31090656 | MS.gene056551:CDS |
| TGCCAGGAATAAACAATGGG+AGG | 0.638245 | 8.3:-31090322 | None:intergenic |
| CCCGGTTAACTGCATCAGGA+GGG | 0.640329 | 8.3:-31090169 | None:intergenic |
| TTAGAAATACTAGTGAGTCC+CGG | 0.641069 | 8.3:-31090187 | None:intergenic |
| CCGGTCCAGCTGAAAGCAAG+CGG | 0.646338 | 8.3:-31090790 | None:intergenic |
| TACAGTCTGCTAAGTGACAA+CGG | 0.654544 | 8.3:+31090497 | MS.gene056551:CDS |
| CTGGACCGGACTATGTTCGT+AGG | 0.661692 | 8.3:+31090804 | MS.gene056551:CDS |
| AATGCTAGGAGAAGAGCACT+CGG | 0.664079 | 8.3:+31090595 | MS.gene056551:CDS |
| GGTCTATTGAATTTGCAGCA+AGG | 0.670145 | 8.3:-31090043 | None:intergenic |
| GATACAACGAGTCAGATGAT+GGG | 0.670491 | 8.3:-31090064 | None:intergenic |
| GGAGGGAGAGGTTCTAAAGG+CGG | 0.680038 | 8.3:-31090152 | None:intergenic |
| TAATGCTGGATCCTTCTACC+CGG | 0.684138 | 8.3:-31090391 | None:intergenic |
| ATAGCCAAAAGTCTAATCTG+CGG | 0.685024 | 8.3:-31090631 | None:intergenic |
| AGGATGCATAGAGAGTAACA+AGG | 0.706911 | 8.3:-31090754 | None:intergenic |
| GAGTTTCAATGGTGTCAGTG+CGG | 0.765466 | 8.3:+31090010 | MS.gene056551:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATCATGAATAAGAATAATGC+TGG | - | chr8.3:31090408-31090427 | None:intergenic | 25.0% |
| AATAGTAGTATTGTTGGCAA+TGG | + | chr8.3:31090467-31090486 | MS.gene056551:CDS | 30.0% | |
| CTTGTCTATAGCAATAATCT+GGG | + | chr8.3:31090689-31090708 | MS.gene056551:CDS | 30.0% | |
| TCTTGTCTATAGCAATAATC+TGG | + | chr8.3:31090688-31090707 | MS.gene056551:CDS | 30.0% | |
| !! | TATGCATCCTTTTCGTTTTT+CGG | + | chr8.3:31090767-31090786 | MS.gene056551:CDS | 30.0% |
| ATAGCCAAAAGTCTAATCTG+CGG | - | chr8.3:31090634-31090653 | None:intergenic | 35.0% | |
| ATAGTGATGTGTGTTGTGAT+AGG | + | chr8.3:31090549-31090568 | MS.gene056551:CDS | 35.0% | |
| CAACAATACTACTATTGTGG+CGG | - | chr8.3:31090463-31090482 | None:intergenic | 35.0% | |
| GTCTATTGAATTTGCAGCAA+GGG | - | chr8.3:31090045-31090064 | None:intergenic | 35.0% | |
| TACTACATCACATACTTCTG+TGG | + | chr8.3:31090653-31090672 | MS.gene056551:CDS | 35.0% | |
| TGCCAACAATACTACTATTG+TGG | - | chr8.3:31090466-31090485 | None:intergenic | 35.0% | |
| TTAGAAATACTAGTGAGTCC+CGG | - | chr8.3:31090190-31090209 | None:intergenic | 35.0% | |
| ! | TTCCTTCTGACTTGAAAACA+TGG | - | chr8.3:31090525-31090544 | None:intergenic | 35.0% |
| !!! | ATCCATGTTTTCAAGTCAGA+AGG | + | chr8.3:31090520-31090539 | MS.gene056551:CDS | 35.0% |
| AACTTCTTAGCCATCTTCAC+TGG | + | chr8.3:31090215-31090234 | MS.gene056551:CDS | 40.0% | |
| AATGCAAGTGTTCGGTTAAC+TGG | - | chr8.3:31089978-31089997 | None:intergenic | 40.0% | |
| ACGATGCCAGGAATAAACAA+TGG | - | chr8.3:31090329-31090348 | None:intergenic | 40.0% | |
| AGATACAACGAGTCAGATGA+TGG | - | chr8.3:31090068-31090087 | None:intergenic | 40.0% | |
| AGCCAAACAAGAGGAGATAA+AGG | - | chr8.3:31090241-31090260 | None:intergenic | 40.0% | |
| AGGATGCATAGAGAGTAACA+AGG | - | chr8.3:31090757-31090776 | None:intergenic | 40.0% | |
| AGTATTGTTGGCAATGGAGA+TGG | + | chr8.3:31090473-31090492 | MS.gene056551:CDS | 40.0% | |
| ATATGCTGCAGCCACTTAAA+AGG | - | chr8.3:31089911-31089930 | None:intergenic | 40.0% | |
| ATCCTCCCATTGTTTATTCC+TGG | + | chr8.3:31090320-31090339 | MS.gene056551:CDS | 40.0% | |
| CGATGCCAGGAATAAACAAT+GGG | - | chr8.3:31090328-31090347 | None:intergenic | 40.0% | |
| CGCCACAATAGTAGTATTGT+TGG | + | chr8.3:31090461-31090480 | MS.gene056551:CDS | 40.0% | |
| GAATAAACAATGGGAGGATG+AGG | - | chr8.3:31090319-31090338 | None:intergenic | 40.0% | |
| GATACAACGAGTCAGATGAT+GGG | - | chr8.3:31090067-31090086 | None:intergenic | 40.0% | |
| GCTGCAATGCAAACAAAAAG+AGG | - | chr8.3:31090110-31090129 | None:intergenic | 40.0% | |
| GGATGCATAGAGAGTAACAA+GGG | - | chr8.3:31090756-31090775 | None:intergenic | 40.0% | |
| GGTCTATTGAATTTGCAGCA+AGG | - | chr8.3:31090046-31090065 | None:intergenic | 40.0% | |
| GTGTGTTGTGATAGGATGAT+TGG | + | chr8.3:31090557-31090576 | MS.gene056551:CDS | 40.0% | |
| TACAGTCTGCTAAGTGACAA+CGG | + | chr8.3:31090497-31090516 | MS.gene056551:CDS | 40.0% | |
| TACATCACATACTTCTGTGG+AGG | + | chr8.3:31090656-31090675 | MS.gene056551:CDS | 40.0% | |
| TGAGCGATAATGCAAGTGTT+CGG | - | chr8.3:31089986-31090005 | None:intergenic | 40.0% | |
| ! | AATTTGCAGCAAGGGTGTAA+AGG | - | chr8.3:31090037-31090056 | None:intergenic | 40.0% |
| ! | ATTTGCAGCAAGGGTGTAAA+GGG | - | chr8.3:31090036-31090055 | None:intergenic | 40.0% |
| ! | TTCCTTCTGAGCCTTTTAAG+TGG | + | chr8.3:31089897-31089916 | MS.gene056551:CDS | 40.0% |
| ! | TTGTCCGCAGATTAGACTTT+TGG | + | chr8.3:31090627-31090646 | MS.gene056551:CDS | 40.0% |
| AGCCACTTAAAAGGCTCAGA+AGG | - | chr8.3:31089902-31089921 | None:intergenic | 45.0% | |
| CAGGATCACTTGACAATGCT+AGG | + | chr8.3:31090581-31090600 | MS.gene056551:CDS | 45.0% | |
| CTAGCATTGTCAAGTGATCC+TGG | - | chr8.3:31090583-31090602 | None:intergenic | 45.0% | |
| GAAGAACAGTTCCACCAAAG+TGG | - | chr8.3:31090295-31090314 | None:intergenic | 45.0% | |
| GAGATAAAGGCCAGTGAAGA+TGG | - | chr8.3:31090228-31090247 | None:intergenic | 45.0% | |
| GGACAGATTGCTCAATCTCT+CGG | + | chr8.3:31090710-31090729 | MS.gene056551:CDS | 45.0% | |
| GGCCTTTATCTCCTCTTGTT+TGG | + | chr8.3:31090236-31090255 | MS.gene056551:CDS | 45.0% | |
| TAATGCTGGATCCTTCTACC+CGG | - | chr8.3:31090394-31090413 | None:intergenic | 45.0% | |
| TCGCTCACTGTGAGTTTCAA+TGG | + | chr8.3:31089999-31090018 | MS.gene056551:CDS | 45.0% | |
| TGCCAGGAATAAACAATGGG+AGG | - | chr8.3:31090325-31090344 | None:intergenic | 45.0% | |
| TTCCTGGCATCGTATATGCT+CGG | + | chr8.3:31090336-31090355 | MS.gene056551:CDS | 45.0% | |
| ! | GAGTTTCAATGGTGTCAGTG+CGG | + | chr8.3:31090010-31090029 | MS.gene056551:CDS | 45.0% |
| ! | TACTTCTGTGGAGGTACGAT+TGG | + | chr8.3:31090665-31090684 | MS.gene056551:CDS | 45.0% |
| ! | TTGTGATAGGATGATTGGCC+AGG | + | chr8.3:31090562-31090581 | MS.gene056551:CDS | 45.0% |
| !! | AATGCTAGGAGAAGAGCACT+CGG | + | chr8.3:31090595-31090614 | MS.gene056551:CDS | 45.0% |
| AAAGGCGGTTGGCGAAGAAT+TGG | - | chr8.3:31090140-31090159 | None:intergenic | 50.0% | |
| AAGCGGATGAGCCAAACAAG+AGG | - | chr8.3:31090250-31090269 | None:intergenic | 50.0% | |
| CAAGCGGCCGAAAAACGAAA+AGG | - | chr8.3:31090777-31090796 | None:intergenic | 50.0% | |
| CATCGTATATGCTCGGGCTT+GGG | + | chr8.3:31090343-31090362 | MS.gene056551:CDS | 50.0% | |
| CGGTTGGCGAAGAATTGGAA+TGG | - | chr8.3:31090135-31090154 | None:intergenic | 50.0% | |
| GTACCATCCATTCCAGCTTC+CGG | + | chr8.3:31090372-31090391 | MS.gene056551:CDS | 50.0% | |
| TAAGTGGCTGCAGCATATGC+TGG | + | chr8.3:31089913-31089932 | MS.gene056551:CDS | 50.0% | |
| TACCATCCATTCCAGCTTCC+GGG | + | chr8.3:31090373-31090392 | MS.gene056551:CDS | 50.0% | |
| TCCCTCCTGATGCAGTTAAC+CGG | + | chr8.3:31090168-31090187 | MS.gene056551:CDS | 50.0% | |
| TCCTGGCATCGTATATGCTC+GGG | + | chr8.3:31090337-31090356 | MS.gene056551:CDS | 50.0% | |
| TTAACTGCATCAGGAGGGAG+AGG | - | chr8.3:31090167-31090186 | None:intergenic | 50.0% | |
| ! | TCAGGAGGGAGAGGTTCTAA+AGG | - | chr8.3:31090158-31090177 | None:intergenic | 50.0% |
| AGTTCCACCAAAGTGGAGCC+GGG | - | chr8.3:31090288-31090307 | None:intergenic | 55.0% | |
| CAGTTCCACCAAAGTGGAGC+CGG | - | chr8.3:31090289-31090308 | None:intergenic | 55.0% | |
| CATTCCAGCTTCCGGGTAGA+AGG | + | chr8.3:31090380-31090399 | MS.gene056551:CDS | 55.0% | |
| CCCGGTTAACTGCATCAGGA+GGG | - | chr8.3:31090172-31090191 | None:intergenic | 55.0% | |
| CCCTCCTGATGCAGTTAACC+GGG | + | chr8.3:31090169-31090188 | MS.gene056551:CDS | 55.0% | |
| CTGGACCGGACTATGTTCGT+AGG | + | chr8.3:31090804-31090823 | MS.gene056551:CDS | 55.0% | |
| CTTCTACCCGGAAGCTGGAA+TGG | - | chr8.3:31090382-31090401 | None:intergenic | 55.0% | |
| CTTCTTCCATGGCTTCAGCC+CGG | + | chr8.3:31090267-31090286 | MS.gene056551:CDS | 55.0% | |
| GAGTCCCGGTTAACTGCATC+AGG | - | chr8.3:31090176-31090195 | None:intergenic | 55.0% | |
| GCATCGTATATGCTCGGGCT+TGG | + | chr8.3:31090342-31090361 | MS.gene056551:CDS | 55.0% | |
| GGCTGAAGCCATGGAAGAAG+CGG | - | chr8.3:31090267-31090286 | None:intergenic | 55.0% | |
| TACCCGGAAGCTGGAATGGA+TGG | - | chr8.3:31090378-31090397 | None:intergenic | 55.0% | |
| TCCCGGTTAACTGCATCAGG+AGG | - | chr8.3:31090173-31090192 | None:intergenic | 55.0% | |
| TGGCTCATCCGCTTCTTCCA+TGG | + | chr8.3:31090256-31090275 | MS.gene056551:CDS | 55.0% | |
| !! | GGAGAGGTTCTAAAGGCGGT+TGG | - | chr8.3:31090151-31090170 | None:intergenic | 55.0% |
| !! | GGAGGGAGAGGTTCTAAAGG+CGG | - | chr8.3:31090155-31090174 | None:intergenic | 55.0% |
| CCGCTTGCTTTCAGCTGGAC+CGG | + | chr8.3:31090790-31090809 | MS.gene056551:CDS | 60.0% | |
| CCGGTCCAGCTGAAAGCAAG+CGG | - | chr8.3:31090793-31090812 | None:intergenic | 60.0% | |
| GCCCGAGCATATACGATGCC+AGG | - | chr8.3:31090341-31090360 | None:intergenic | 60.0% | |
| GGATCCTTCTACCCGGAAGC+TGG | - | chr8.3:31090387-31090406 | None:intergenic | 60.0% | |
| TTCGGCCGCTTGCTTTCAGC+TGG | + | chr8.3:31090785-31090804 | MS.gene056551:CDS | 60.0% | |
| !! | AGGAGAAGAGCACTCGGCTG+CGG | + | chr8.3:31090601-31090620 | MS.gene056551:CDS | 60.0% |
| GCTTCAGCCCGGCTCCACTT+TGG | + | chr8.3:31090278-31090297 | MS.gene056551:CDS | 65.0% | |
| TCAGCCCGGCTCCACTTTGG+TGG | + | chr8.3:31090281-31090300 | MS.gene056551:CDS | 65.0% | |
| GTGGAGCCGGGCTGAAGCCA+TGG | - | chr8.3:31090276-31090295 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 31089876 | 31090829 | 31089876 | ID=MS.gene056551 |
| chr8.3 | mRNA | 31089876 | 31090829 | 31089876 | ID=MS.gene056551.t1;Parent=MS.gene056551 |
| chr8.3 | exon | 31089876 | 31090829 | 31089876 | ID=MS.gene056551.t1.exon1;Parent=MS.gene056551.t1 |
| chr8.3 | CDS | 31089876 | 31090829 | 31089876 | ID=cds.MS.gene056551.t1;Parent=MS.gene056551.t1 |
| Gene Sequence |
| Protein sequence |
