Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056682.t1 | XP_013456385.1 | 98.3 | 352 | 6 | 0 | 1 | 352 | 80 | 431 | 1.90E-196 | 694.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056682.t1 | Q9LN62 | 70.4 | 358 | 97 | 3 | 1 | 350 | 71 | 427 | 4.2e-139 | 495.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056682.t1 | A0A072UM19 | 98.3 | 352 | 6 | 0 | 1 | 352 | 80 | 431 | 1.4e-196 | 694.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056682 | MS.gene45704 | 0.846272 | 2.41E-59 | -1.69E-46 |
| MS.gene056682 | MS.gene50057 | 0.851835 | 6.85E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056682.t1 | MTR_4g069350 | 98.295 | 352 | 6 | 0 | 1 | 352 | 80 | 431 | 0.0 | 717 |
| MS.gene056682.t1 | MTR_4g069420 | 87.989 | 358 | 36 | 1 | 2 | 352 | 72 | 429 | 0.0 | 648 |
| MS.gene056682.t1 | MTR_4g069390 | 87.571 | 354 | 42 | 1 | 1 | 352 | 1 | 354 | 0.0 | 632 |
| MS.gene056682.t1 | MTR_4g069300 | 85.714 | 357 | 44 | 1 | 1 | 350 | 80 | 436 | 0.0 | 623 |
| MS.gene056682.t1 | MTR_4g069260 | 82.073 | 357 | 56 | 2 | 1 | 350 | 80 | 435 | 0.0 | 605 |
| MS.gene056682.t1 | MTR_4g069430 | 86.431 | 339 | 44 | 1 | 15 | 351 | 83 | 421 | 0.0 | 584 |
| MS.gene056682.t1 | MTR_1g022025 | 72.543 | 346 | 88 | 1 | 12 | 350 | 82 | 427 | 0.0 | 525 |
| MS.gene056682.t1 | MTR_8g069400 | 28.079 | 203 | 122 | 8 | 69 | 265 | 1378 | 1562 | 1.03e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056682.t1 | AT1G19360 | 70.391 | 358 | 97 | 3 | 1 | 350 | 71 | 427 | 0.0 | 516 |
| MS.gene056682.t1 | AT1G19360 | 70.391 | 358 | 97 | 3 | 1 | 350 | 71 | 427 | 0.0 | 516 |
| MS.gene056682.t1 | AT1G75110 | 68.908 | 357 | 103 | 2 | 1 | 350 | 72 | 427 | 0.0 | 509 |
| MS.gene056682.t1 | AT1G75120 | 68.286 | 350 | 105 | 2 | 1 | 350 | 59 | 402 | 2.28e-173 | 488 |
| MS.gene056682.t1 | AT1G70630 | 28.910 | 211 | 118 | 6 | 69 | 269 | 230 | 418 | 8.10e-16 | 79.0 |
| MS.gene056682.t1 | AT1G70630 | 28.910 | 211 | 118 | 6 | 69 | 269 | 261 | 449 | 1.07e-15 | 78.6 |
| MS.gene056682.t1 | AT1G70630 | 28.910 | 211 | 118 | 6 | 69 | 269 | 261 | 449 | 1.07e-15 | 78.6 |
| MS.gene056682.t1 | AT1G70630 | 28.910 | 211 | 118 | 6 | 69 | 269 | 398 | 586 | 1.46e-15 | 78.2 |
| MS.gene056682.t1 | AT1G70630 | 28.910 | 211 | 118 | 6 | 69 | 269 | 446 | 634 | 1.51e-15 | 78.2 |
| MS.gene056682.t1 | AT1G70630 | 28.910 | 211 | 118 | 6 | 69 | 269 | 477 | 665 | 1.92e-15 | 78.2 |
| MS.gene056682.t1 | AT1G70630 | 28.910 | 211 | 118 | 6 | 69 | 269 | 467 | 655 | 2.07e-15 | 77.8 |
Find 74 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCGGGTCTCTTTGGTAAAA+TGG | 0.121490 | 4.3:-35984271 | None:intergenic |
| CATTCCTTCAATTGAGCTTT+TGG | 0.209327 | 4.3:+35984606 | MS.gene056682:CDS |
| AAGGCAACAACTAGATAATT+AGG | 0.282391 | 4.3:-35984208 | None:intergenic |
| CATAATAACATGACAGCTTA+TGG | 0.285401 | 4.3:+35984481 | MS.gene056682:CDS |
| GTTGTTGAATATTATGTTAA+TGG | 0.296088 | 4.3:+35984877 | MS.gene056682:CDS |
| CCAAACGGTGCGGCTGTCTC+CGG | 0.317342 | 4.3:+35984322 | MS.gene056682:CDS |
| TATCATTATCCGGGTCTCTT+TGG | 0.318671 | 4.3:-35984279 | None:intergenic |
| TCATGCTGCTAAAAGAACTA+TGG | 0.353213 | 4.3:+35984726 | MS.gene056682:CDS |
| TCTAATAAATTTGCCAATCT+CGG | 0.356388 | 4.3:-35984085 | None:intergenic |
| TTGTTGAATATTATGTTAAT+GGG | 0.359540 | 4.3:+35984878 | MS.gene056682:CDS |
| CATGTTAAAATCAGAATTAG+TGG | 0.362941 | 4.3:+35983886 | None:intergenic |
| TATACCAACTCTCTTGATAT+TGG | 0.365508 | 4.3:-35984185 | None:intergenic |
| GTTGCTTGCATTAAGTAAAC+AGG | 0.375504 | 4.3:+35983988 | MS.gene056682:CDS |
| AATTCATCAGGAGCAACAAT+AGG | 0.376468 | 4.3:-35984055 | None:intergenic |
| TAATTCACGTGAATAATTAC+CGG | 0.389710 | 4.3:-35984823 | None:intergenic |
| CGAGGTGTGCCATCGGGAAA+TGG | 0.401340 | 4.3:-35984919 | None:intergenic |
| CCGGGTCTCTTTGGTAAAAT+GGG | 0.403345 | 4.3:-35984270 | None:intergenic |
| ACAGTATCAATATCATTATC+CGG | 0.404384 | 4.3:-35984289 | None:intergenic |
| AGAATTAGTGGCACTCTTAT+CGG | 0.411192 | 4.3:+35983898 | MS.gene056682:CDS |
| CTAATAAATTTGCCAATCTC+GGG | 0.411225 | 4.3:-35984084 | None:intergenic |
| CCGGAGACAGCCGCACCGTT+TGG | 0.418325 | 4.3:-35984322 | None:intergenic |
| TGAATTCTTGAACCCGAGAT+TGG | 0.422149 | 4.3:+35984072 | MS.gene056682:CDS |
| TGATCATCTATACCGTGATT+CGG | 0.426234 | 4.3:+35984435 | MS.gene056682:CDS |
| CAAACGGTGCGGCTGTCTCC+GGG | 0.441277 | 4.3:+35984323 | MS.gene056682:CDS |
| CTCGGGTTCAAGAATTCATC+AGG | 0.455431 | 4.3:-35984067 | None:intergenic |
| AGCTCAATTGAAGGAATGGT+TGG | 0.470800 | 4.3:-35984601 | None:intergenic |
| TCAACAACTGCTTTCATTCG+CGG | 0.485251 | 4.3:-35984862 | None:intergenic |
| ATTCATCAGGAGCAACAATA+GGG | 0.490622 | 4.3:-35984054 | None:intergenic |
| CCTTCACATTTGAGTTTGCA+AGG | 0.492258 | 4.3:-35984141 | None:intergenic |
| TCACGGTATAGATGATCAAA+AGG | 0.505121 | 4.3:-35984430 | None:intergenic |
| GACTTTCGAAGGGGAATGCA+TGG | 0.506305 | 4.3:+35984644 | MS.gene056682:CDS |
| CAAAAGCTCAATTGAAGGAA+TGG | 0.508580 | 4.3:-35984605 | None:intergenic |
| GGTTATCGAGGTGTGCCATC+GGG | 0.509771 | 4.3:-35984925 | None:intergenic |
| GTTATTATGACCATCGCTCA+TGG | 0.514082 | 4.3:-35984467 | None:intergenic |
| TAACCTCAGTAAATTGAAAC+CGG | 0.514324 | 4.3:+35984804 | MS.gene056682:CDS |
| CCATCACATCCTGGTTATGA+CGG | 0.520532 | 4.3:+35984700 | MS.gene056682:CDS |
| CGGTCCAAAAGCTCAATTGA+AGG | 0.530180 | 4.3:-35984610 | None:intergenic |
| GATAATGATATTGATACTGT+TGG | 0.535960 | 4.3:+35984292 | MS.gene056682:CDS |
| ATCAGGAGCAACAATAGGGT+TGG | 0.536486 | 4.3:-35984050 | None:intergenic |
| GCATGAAGCCCGTCATAACC+AGG | 0.559070 | 4.3:-35984709 | None:intergenic |
| TGAAGGAAATGCTCGAGGTA+TGG | 0.559342 | 4.3:+35984158 | MS.gene056682:CDS |
| CATCACATCCTGGTTATGAC+GGG | 0.559997 | 4.3:+35984701 | MS.gene056682:CDS |
| CAGTATCAATATCATTATCC+GGG | 0.561690 | 4.3:-35984288 | None:intergenic |
| TCAAAGACCATGGGATGGGT+TGG | 0.564496 | 4.3:+35984518 | MS.gene056682:CDS |
| TGTGGCAGCACGACTTTCGA+AGG | 0.565368 | 4.3:+35984633 | MS.gene056682:CDS |
| AGGTTATCGAGGTGTGCCAT+CGG | 0.565382 | 4.3:-35984926 | None:intergenic |
| GAAATGGTTTGAGAGCATCT+TGG | 0.566472 | 4.3:-35984903 | None:intergenic |
| GTCTTCAAAGACCATGGGAT+GGG | 0.567731 | 4.3:+35984514 | MS.gene056682:CDS |
| CTTCACATTTGAGTTTGCAA+GGG | 0.571821 | 4.3:-35984140 | None:intergenic |
| TCGAAAGTCGTGCTGCCACA+CGG | 0.575082 | 4.3:-35984630 | None:intergenic |
| TAGAATACGAAATTTAAGCC+CGG | 0.575223 | 4.3:-35984341 | None:intergenic |
| AACGATGTCTTCAAAGACCA+TGG | 0.583875 | 4.3:+35984508 | MS.gene056682:CDS |
| CCTTGCAAACTCAAATGTGA+AGG | 0.591600 | 4.3:+35984141 | MS.gene056682:CDS |
| GTGGCAGCACGACTTTCGAA+GGG | 0.594024 | 4.3:+35984634 | MS.gene056682:CDS |
| GTTCCTCGTTGAAAACAGCT+TGG | 0.595843 | 4.3:-35984669 | None:intergenic |
| TTCACCAATATCAAGAGAGT+TGG | 0.596908 | 4.3:+35984181 | MS.gene056682:CDS |
| AATGCCTTGACAGTACCAAA+AGG | 0.604979 | 4.3:-35984022 | None:intergenic |
| CCGTCATAACCAGGATGTGA+TGG | 0.606127 | 4.3:-35984700 | None:intergenic |
| TCATTCGCGGAAGCTTATCA+CGG | 0.615337 | 4.3:-35984849 | None:intergenic |
| TGGATTCAACATCCGAATCA+CGG | 0.620285 | 4.3:-35984447 | None:intergenic |
| TGTCTTCAAAGACCATGGGA+TGG | 0.621538 | 4.3:+35984513 | MS.gene056682:CDS |
| TAGTAGACCAACCCATCCCA+TGG | 0.627281 | 4.3:-35984525 | None:intergenic |
| GATGTTGAATCCATGAGCGA+TGG | 0.628620 | 4.3:+35984457 | MS.gene056682:CDS |
| CAGGTGAGGGAGTTGACAGA+AGG | 0.641613 | 4.3:+35983944 | MS.gene056682:CDS |
| ACGATGTCTTCAAAGACCAT+GGG | 0.646143 | 4.3:+35984509 | MS.gene056682:CDS |
| ACATAGAAACAAGGTTATCG+AGG | 0.646977 | 4.3:-35984937 | None:intergenic |
| ACTTTCGAAGGGGAATGCAT+GGG | 0.655092 | 4.3:+35984645 | MS.gene056682:CDS |
| CTACTAACGTTTATACGACG+AGG | 0.660402 | 4.3:+35984542 | MS.gene056682:CDS |
| AAATGTGAAGGAAATGCTCG+AGG | 0.663837 | 4.3:+35984153 | MS.gene056682:CDS |
| TTACCGGTTTCAATTTACTG+AGG | 0.667376 | 4.3:-35984807 | None:intergenic |
| GTTGACAGAAGGAAAAGACC+AGG | 0.672608 | 4.3:+35983955 | MS.gene056682:CDS |
| GCTCTCAAACCATTTCCCGA+TGG | 0.676608 | 4.3:+35984910 | MS.gene056682:CDS |
| TGGCAGCACGACTTTCGAAG+GGG | 0.696691 | 4.3:+35984635 | MS.gene056682:CDS |
| TTCGCGGAAGCTTATCACGG+TGG | 0.727930 | 4.3:-35984846 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGTTGAATATTATGTTAAT+GGG | + | chr4.3:35984878-35984897 | MS.gene056682:CDS | 15.0% |
| !! | GTTGTTGAATATTATGTTAA+TGG | + | chr4.3:35984877-35984896 | MS.gene056682:CDS | 20.0% |
| ! | ACAGTATCAATATCATTATC+CGG | - | chr4.3:35984292-35984311 | None:intergenic | 25.0% |
| ! | GATAATGATATTGATACTGT+TGG | + | chr4.3:35984292-35984311 | MS.gene056682:CDS | 25.0% |
| ! | TAATTCACGTGAATAATTAC+CGG | - | chr4.3:35984826-35984845 | None:intergenic | 25.0% |
| ! | TCTAATAAATTTGCCAATCT+CGG | - | chr4.3:35984088-35984107 | None:intergenic | 25.0% |
| !!! | AGGATATTTGTTTTCAATTC+TGG | + | chr4.3:35984562-35984581 | MS.gene056682:CDS | 25.0% |
| AAGGCAACAACTAGATAATT+AGG | - | chr4.3:35984211-35984230 | None:intergenic | 30.0% | |
| ACTGTTGGAAAAATTCCAAA+CGG | + | chr4.3:35984307-35984326 | MS.gene056682:CDS | 30.0% | |
| CAGTATCAATATCATTATCC+GGG | - | chr4.3:35984291-35984310 | None:intergenic | 30.0% | |
| CATAATAACATGACAGCTTA+TGG | + | chr4.3:35984481-35984500 | MS.gene056682:CDS | 30.0% | |
| CTAATAAATTTGCCAATCTC+GGG | - | chr4.3:35984087-35984106 | None:intergenic | 30.0% | |
| TAACCTCAGTAAATTGAAAC+CGG | + | chr4.3:35984804-35984823 | MS.gene056682:CDS | 30.0% | |
| TAGAATACGAAATTTAAGCC+CGG | - | chr4.3:35984344-35984363 | None:intergenic | 30.0% | |
| TATACCAACTCTCTTGATAT+TGG | - | chr4.3:35984188-35984207 | None:intergenic | 30.0% | |
| TTAAGTAAACAGGAAAAAGC+TGG | + | chr4.3:35983998-35984017 | MS.gene056682:CDS | 30.0% | |
| ! | CTAAGAGAATTTTTGCAGTT+GGG | + | chr4.3:35984361-35984380 | MS.gene056682:CDS | 30.0% |
| ! | TCTAAGAGAATTTTTGCAGT+TGG | + | chr4.3:35984360-35984379 | MS.gene056682:CDS | 30.0% |
| ! | TTTTGCAATCTCATCATCTA+AGG | - | chr4.3:35984230-35984249 | None:intergenic | 30.0% |
| AAATGCAGAGCTGAAAAAAC+AGG | + | chr4.3:35983925-35983944 | MS.gene056682:CDS | 35.0% | |
| AATTCATCAGGAGCAACAAT+AGG | - | chr4.3:35984058-35984077 | None:intergenic | 35.0% | |
| AGAATTAGTGGCACTCTTAT+CGG | + | chr4.3:35983898-35983917 | MS.gene056682:CDS | 35.0% | |
| ATTCATCAGGAGCAACAATA+GGG | - | chr4.3:35984057-35984076 | None:intergenic | 35.0% | |
| CAAAAGCTCAATTGAAGGAA+TGG | - | chr4.3:35984608-35984627 | None:intergenic | 35.0% | |
| GTTGCTTGCATTAAGTAAAC+AGG | + | chr4.3:35983988-35984007 | MS.gene056682:CDS | 35.0% | |
| TCACGGTATAGATGATCAAA+AGG | - | chr4.3:35984433-35984452 | None:intergenic | 35.0% | |
| TCATGCTGCTAAAAGAACTA+TGG | + | chr4.3:35984726-35984745 | MS.gene056682:CDS | 35.0% | |
| TGATCATCTATACCGTGATT+CGG | + | chr4.3:35984435-35984454 | MS.gene056682:CDS | 35.0% | |
| TTCACCAATATCAAGAGAGT+TGG | + | chr4.3:35984181-35984200 | MS.gene056682:CDS | 35.0% | |
| ! | CATTCCTTCAATTGAGCTTT+TGG | + | chr4.3:35984606-35984625 | MS.gene056682:CDS | 35.0% |
| ! | CTTCACATTTGAGTTTGCAA+GGG | - | chr4.3:35984143-35984162 | None:intergenic | 35.0% |
| !! | TTACCGGTTTCAATTTACTG+AGG | - | chr4.3:35984810-35984829 | None:intergenic | 35.0% |
| AAATGTGAAGGAAATGCTCG+AGG | + | chr4.3:35984153-35984172 | MS.gene056682:CDS | 40.0% | |
| AACGATGTCTTCAAAGACCA+TGG | + | chr4.3:35984508-35984527 | MS.gene056682:CDS | 40.0% | |
| AATGCCTTGACAGTACCAAA+AGG | - | chr4.3:35984025-35984044 | None:intergenic | 40.0% | |
| ACGATGTCTTCAAAGACCAT+GGG | + | chr4.3:35984509-35984528 | MS.gene056682:CDS | 40.0% | |
| AGAGCTGAAAAAACAGGTGA+GGG | + | chr4.3:35983931-35983950 | MS.gene056682:CDS | 40.0% | |
| AGCTCAATTGAAGGAATGGT+TGG | - | chr4.3:35984604-35984623 | None:intergenic | 40.0% | |
| CCTTGCAAACTCAAATGTGA+AGG | + | chr4.3:35984141-35984160 | MS.gene056682:CDS | 40.0% | |
| CTACTAACGTTTATACGACG+AGG | + | chr4.3:35984542-35984561 | MS.gene056682:CDS | 40.0% | |
| GTTATTATGACCATCGCTCA+TGG | - | chr4.3:35984470-35984489 | None:intergenic | 40.0% | |
| TATCATTATCCGGGTCTCTT+TGG | - | chr4.3:35984282-35984301 | None:intergenic | 40.0% | |
| TCAACAACTGCTTTCATTCG+CGG | - | chr4.3:35984865-35984884 | None:intergenic | 40.0% | |
| TGAATTCTTGAACCCGAGAT+TGG | + | chr4.3:35984072-35984091 | MS.gene056682:CDS | 40.0% | |
| TGGAAAAATTCCAAACGGTG+CGG | + | chr4.3:35984312-35984331 | MS.gene056682:CDS | 40.0% | |
| TGGATTCAACATCCGAATCA+CGG | - | chr4.3:35984450-35984469 | None:intergenic | 40.0% | |
| ! | CCTTCACATTTGAGTTTGCA+AGG | - | chr4.3:35984144-35984163 | None:intergenic | 40.0% |
| ! | CTCTTTTATCCATCACATCC+TGG | + | chr4.3:35984691-35984710 | MS.gene056682:CDS | 40.0% |
| ! | TGAACAGCAGAGTTCTTTTC+AGG | + | chr4.3:35984764-35984783 | MS.gene056682:CDS | 40.0% |
| !! | GAAATGGTTTGAGAGCATCT+TGG | - | chr4.3:35984906-35984925 | None:intergenic | 40.0% |
| !!! | CAAGCAACTTTTTTTCAGCC+TGG | - | chr4.3:35983976-35983995 | None:intergenic | 40.0% |
| ACTTTCGAAGGGGAATGCAT+GGG | + | chr4.3:35984645-35984664 | MS.gene056682:CDS | 45.0% | |
| ATCAGGAGCAACAATAGGGT+TGG | - | chr4.3:35984053-35984072 | None:intergenic | 45.0% | |
| CAGAGCTGAAAAAACAGGTG+AGG | + | chr4.3:35983930-35983949 | MS.gene056682:CDS | 45.0% | |
| CATCACATCCTGGTTATGAC+GGG | + | chr4.3:35984701-35984720 | MS.gene056682:CDS | 45.0% | |
| CCATCACATCCTGGTTATGA+CGG | + | chr4.3:35984700-35984719 | MS.gene056682:CDS | 45.0% | |
| CCGGGTCTCTTTGGTAAAAT+GGG | - | chr4.3:35984273-35984292 | None:intergenic | 45.0% | |
| CGGTCCAAAAGCTCAATTGA+AGG | - | chr4.3:35984613-35984632 | None:intergenic | 45.0% | |
| CTCGGGTTCAAGAATTCATC+AGG | - | chr4.3:35984070-35984089 | None:intergenic | 45.0% | |
| GATGTTGAATCCATGAGCGA+TGG | + | chr4.3:35984457-35984476 | MS.gene056682:CDS | 45.0% | |
| GTCTTCAAAGACCATGGGAT+GGG | + | chr4.3:35984514-35984533 | MS.gene056682:CDS | 45.0% | |
| GTTCCTCGTTGAAAACAGCT+TGG | - | chr4.3:35984672-35984691 | None:intergenic | 45.0% | |
| GTTGACAGAAGGAAAAGACC+AGG | + | chr4.3:35983955-35983974 | MS.gene056682:CDS | 45.0% | |
| TCATTCGCGGAAGCTTATCA+CGG | - | chr4.3:35984852-35984871 | None:intergenic | 45.0% | |
| TCCGGGTCTCTTTGGTAAAA+TGG | - | chr4.3:35984274-35984293 | None:intergenic | 45.0% | |
| TGAAGGAAATGCTCGAGGTA+TGG | + | chr4.3:35984158-35984177 | MS.gene056682:CDS | 45.0% | |
| TGTCTTCAAAGACCATGGGA+TGG | + | chr4.3:35984513-35984532 | MS.gene056682:CDS | 45.0% | |
| ! | AATTGAGCTTTTGGACCGTG+TGG | + | chr4.3:35984615-35984634 | MS.gene056682:CDS | 45.0% |
| ! | CAGGAAAAAGCTGGACCTTT+TGG | + | chr4.3:35984007-35984026 | MS.gene056682:CDS | 45.0% |
| ! | CCCATTTTACCAAAGAGACC+CGG | + | chr4.3:35984270-35984289 | MS.gene056682:CDS | 45.0% |
| ! | TGGACCTTTTGGTACTGTCA+AGG | + | chr4.3:35984018-35984037 | MS.gene056682:CDS | 45.0% |
| !! | GAGTTCTTTTCAGGACAGTG+AGG | + | chr4.3:35984773-35984792 | MS.gene056682:CDS | 45.0% |
| CCGTCATAACCAGGATGTGA+TGG | - | chr4.3:35984703-35984722 | None:intergenic | 50.0% | |
| GACTTTCGAAGGGGAATGCA+TGG | + | chr4.3:35984644-35984663 | MS.gene056682:CDS | 50.0% | |
| GCTCTCAAACCATTTCCCGA+TGG | + | chr4.3:35984910-35984929 | MS.gene056682:CDS | 50.0% | |
| TAGTAGACCAACCCATCCCA+TGG | - | chr4.3:35984528-35984547 | None:intergenic | 50.0% | |
| TCAAAGACCATGGGATGGGT+TGG | + | chr4.3:35984518-35984537 | MS.gene056682:CDS | 50.0% | |
| !! | GGACCAAGCTGTTTTCAACG+AGG | + | chr4.3:35984666-35984685 | MS.gene056682:CDS | 50.0% |
| CAGGTGAGGGAGTTGACAGA+AGG | + | chr4.3:35983944-35983963 | MS.gene056682:CDS | 55.0% | |
| GCATGAAGCCCGTCATAACC+AGG | - | chr4.3:35984712-35984731 | None:intergenic | 55.0% | |
| GTGGCAGCACGACTTTCGAA+GGG | + | chr4.3:35984634-35984653 | MS.gene056682:CDS | 55.0% | |
| TCGAAAGTCGTGCTGCCACA+CGG | - | chr4.3:35984633-35984652 | None:intergenic | 55.0% | |
| TGGCAGCACGACTTTCGAAG+GGG | + | chr4.3:35984635-35984654 | MS.gene056682:CDS | 55.0% | |
| TGTGGCAGCACGACTTTCGA+AGG | + | chr4.3:35984633-35984652 | MS.gene056682:CDS | 55.0% | |
| TTCGCGGAAGCTTATCACGG+TGG | - | chr4.3:35984849-35984868 | None:intergenic | 55.0% | |
| CGAGGTGTGCCATCGGGAAA+TGG | - | chr4.3:35984922-35984941 | None:intergenic | 60.0% | |
| CAAACGGTGCGGCTGTCTCC+GGG | + | chr4.3:35984323-35984342 | MS.gene056682:CDS | 65.0% | |
| CCAAACGGTGCGGCTGTCTC+CGG | + | chr4.3:35984322-35984341 | MS.gene056682:CDS | 65.0% | |
| CCGGAGACAGCCGCACCGTT+TGG | - | chr4.3:35984325-35984344 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 35983887 | 35984945 | 35983887 | ID=MS.gene056682 |
| chr4.3 | mRNA | 35983887 | 35984945 | 35983887 | ID=MS.gene056682.t1;Parent=MS.gene056682 |
| chr4.3 | exon | 35983887 | 35984945 | 35983887 | ID=MS.gene056682.t1.exon1;Parent=MS.gene056682.t1 |
| chr4.3 | CDS | 35983887 | 35984945 | 35983887 | ID=cds.MS.gene056682.t1;Parent=MS.gene056682.t1 |
| Gene Sequence |
| Protein sequence |
