Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056823.t1 | XP_013444788.1 | 96.9 | 358 | 11 | 0 | 1 | 358 | 1 | 358 | 5.70E-196 | 693.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056823.t1 | Q9LMM6 | 55.0 | 338 | 140 | 4 | 1 | 338 | 1 | 326 | 2.1e-93 | 344.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056823.t1 | A0A072TPQ1 | 96.9 | 358 | 11 | 0 | 1 | 358 | 1 | 358 | 4.1e-196 | 693.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056823 | MS.gene074045 | 0.81449 | 1.50E-51 | -1.69E-46 |
| MS.gene056823 | MS.gene47195 | 0.827773 | 1.30E-54 | -1.69E-46 |
| MS.gene056823 | MS.gene55545 | 0.808739 | 2.67E-50 | -1.69E-46 |
| MS.gene056823 | MS.gene70742 | 0.814886 | 1.23E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056823.t1 | MTR_8g028710 | 96.927 | 358 | 11 | 0 | 1 | 358 | 1 | 358 | 0.0 | 716 |
| MS.gene056823.t1 | MTR_7g078700 | 67.227 | 357 | 111 | 3 | 1 | 357 | 1 | 351 | 3.91e-172 | 483 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene056823.t1 | AT2G46080 | 58.924 | 353 | 139 | 3 | 1 | 353 | 1 | 347 | 9.59e-143 | 408 |
| MS.gene056823.t1 | AT1G01550 | 55.030 | 338 | 140 | 4 | 1 | 338 | 1 | 326 | 6.96e-122 | 355 |
| MS.gene056823.t1 | AT1G01550 | 55.030 | 338 | 140 | 4 | 1 | 338 | 1 | 326 | 6.96e-122 | 355 |
| MS.gene056823.t1 | AT4G01360 | 38.873 | 355 | 183 | 8 | 18 | 355 | 10 | 347 | 1.14e-70 | 224 |
| MS.gene056823.t1 | AT3G61500 | 42.857 | 168 | 89 | 3 | 20 | 185 | 13 | 175 | 9.63e-31 | 118 |
| MS.gene056823.t1 | AT3G61500 | 43.590 | 156 | 83 | 2 | 33 | 186 | 24 | 176 | 3.80e-30 | 117 |
Find 91 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCGTTCTTTCTTCCCTTTC+GGG | 0.117338 | 8.4:-66962356 | MS.gene056823:CDS |
| AACCGTTCTTTCTTCCCTTT+CGG | 0.216566 | 8.4:-66962357 | MS.gene056823:CDS |
| GTGCTACATTTCTCAATTCT+AGG | 0.226753 | 8.4:+66961892 | None:intergenic |
| AGGATTTCATCCTTGCTTTC+GGG | 0.246169 | 8.4:+66962222 | None:intergenic |
| GAGGATTTCATCCTTGCTTT+CGG | 0.260835 | 8.4:+66962221 | None:intergenic |
| GCAGCTCAAGATCTGTTATA+AGG | 0.294059 | 8.4:+66962136 | None:intergenic |
| TTGAAGACTGTTGAGGAATT+AGG | 0.327051 | 8.4:-66961502 | MS.gene056823:CDS |
| TTGAGCTGCCCGTGAGTGTT+TGG | 0.327813 | 8.4:-66962122 | MS.gene056823:CDS |
| CTCATCAAAGTCGTTTCTTC+GGG | 0.357220 | 8.4:-66961962 | MS.gene056823:CDS |
| CCTCATCAAAGTCGTTTCTT+CGG | 0.377060 | 8.4:-66961963 | MS.gene056823:CDS |
| TTGCTATCGTCTCTGAGGTT+TGG | 0.380646 | 8.4:-66961388 | MS.gene056823:CDS |
| AAGTGTGCCTTGCACAATTT+AGG | 0.389595 | 8.4:-66961991 | MS.gene056823:CDS |
| TAAATGAGGAAATTAGAGTT+AGG | 0.394328 | 8.4:-66961648 | MS.gene056823:CDS |
| CTACTTGCTGATCTATGTTT+CGG | 0.404445 | 8.4:+66961338 | None:intergenic |
| TTCTTGCTCAACTTTGTCTT+CGG | 0.412172 | 8.4:+66961531 | None:intergenic |
| TTGCAAGGAGATCCATTCCT+TGG | 0.419978 | 8.4:+66961458 | None:intergenic |
| ATTTACACCACCTTGGATAG+TGG | 0.424354 | 8.4:+66961555 | None:intergenic |
| TGAGCTGCCCGTGAGTGTTT+GGG | 0.428902 | 8.4:-66962121 | MS.gene056823:CDS |
| TTATGTGACTTTGTCCGAAA+AGG | 0.431269 | 8.4:+66962330 | None:intergenic |
| TTTCGGACAAAGTCACATAA+AGG | 0.434959 | 8.4:-66962327 | MS.gene056823:CDS |
| TTGCATCAAAACCTTACCTT+TGG | 0.435215 | 8.4:+66961816 | None:intergenic |
| TGAGTGTTTGGGATGACAAA+TGG | 0.445686 | 8.4:-66962110 | MS.gene056823:CDS |
| TTCTGTAAGCCTTTAAAAGC+AGG | 0.447997 | 8.4:+66961676 | None:intergenic |
| GAGCTTTCTCGTCTGAATCA+AGG | 0.448368 | 8.4:-66962027 | MS.gene056823:CDS |
| ATGTGCCTGACATGCATTCA+TGG | 0.449122 | 8.4:-66961702 | MS.gene056823:CDS |
| ACCATTCTAGATGGTCTTGT+AGG | 0.450952 | 8.4:-66961871 | MS.gene056823:CDS |
| TGCAAGGAGATCCATTCCTT+GGG | 0.451475 | 8.4:+66961459 | None:intergenic |
| GGCGCCCATGAATGCATGTC+AGG | 0.451880 | 8.4:+66961697 | None:intergenic |
| AGAAACGACTTTGATGAGGC+TGG | 0.457208 | 8.4:+66961967 | None:intergenic |
| CAGTTACTTGCAGTACTACA+TGG | 0.458895 | 8.4:-66962285 | MS.gene056823:CDS |
| TGCAGTACTACATGGTTTCG+AGG | 0.460694 | 8.4:-66962277 | MS.gene056823:CDS |
| AAATGTAGCACCATTCTAGA+TGG | 0.460812 | 8.4:-66961880 | MS.gene056823:CDS |
| TTCAAAGAAGTTGCTAGACT+TGG | 0.464628 | 8.4:-66961725 | MS.gene056823:CDS |
| ATGAAATCCTCAGCTTGTCT+TGG | 0.465634 | 8.4:-66962209 | MS.gene056823:CDS |
| AAAGGGAAGAAAGAACGGTT+TGG | 0.468817 | 8.4:+66962360 | None:intergenic |
| TGCTACATTTCTCAATTCTA+GGG | 0.473899 | 8.4:+66961893 | None:intergenic |
| CTACATTAGCAGAGAGGCTA+AGG | 0.476706 | 8.4:-66962254 | MS.gene056823:CDS |
| TCCGAAAAGGATTCCCGAAA+GGG | 0.478620 | 8.4:+66962343 | None:intergenic |
| CAGCTCAAGATCTGTTATAA+GGG | 0.484674 | 8.4:+66962137 | None:intergenic |
| CTTACAGAATCTTGTAAATG+AGG | 0.487402 | 8.4:-66961662 | MS.gene056823:CDS |
| CATGTTCTTTACTCGATGAC+TGG | 0.490294 | 8.4:-66961939 | MS.gene056823:CDS |
| AAGGGAAGAAAGAACGGTTT+GGG | 0.492118 | 8.4:+66962361 | None:intergenic |
| ACTGTAAATGATCGTGTCGT+TGG | 0.506521 | 8.4:-66961361 | MS.gene056823:CDS |
| CTCCTTGCAAAGGGAGTGGA+TGG | 0.507754 | 8.4:-66961445 | MS.gene056823:CDS |
| AGGATCACTTGATCTTCCTA+AGG | 0.519671 | 8.4:-66961851 | MS.gene056823:CDS |
| GAAATTAGAGTTAGGTTCTC+CGG | 0.520380 | 8.4:-66961640 | MS.gene056823:CDS |
| CAGCTTGTCTTGGATGACTT+CGG | 0.520950 | 8.4:-66962199 | MS.gene056823:CDS |
| CTTCGGTATTTACACCACCT+TGG | 0.523873 | 8.4:+66961548 | None:intergenic |
| AAGAAAGAACGGTTTGGGTG+TGG | 0.525803 | 8.4:+66962366 | None:intergenic |
| CACGACTAGTCAAAACTGCT+TGG | 0.526184 | 8.4:+66961416 | None:intergenic |
| GAGTGTTTGGGATGACAAAT+GGG | 0.539560 | 8.4:-66962109 | MS.gene056823:CDS |
| GAAGCTTATGCCCGAAAGCA+AGG | 0.539945 | 8.4:-66962232 | MS.gene056823:CDS |
| GCAGTAAATGAGTCGTTCAC+AGG | 0.546924 | 8.4:-66962391 | None:intergenic |
| GGATCTCCTTGCAAAGGGAG+TGG | 0.550124 | 8.4:-66961449 | MS.gene056823:CDS |
| TTTACACCACCTTGGATAGT+GGG | 0.553081 | 8.4:+66961556 | None:intergenic |
| GGAATGGATCTCCTTGCAAA+GGG | 0.556996 | 8.4:-66961454 | MS.gene056823:CDS |
| TCCCGAAAGGGAAGAAAGAA+CGG | 0.561151 | 8.4:+66962355 | None:intergenic |
| GAAACGACTTTGATGAGGCT+GGG | 0.565221 | 8.4:+66961968 | None:intergenic |
| TTGTCATCCCAAACACTCAC+GGG | 0.568656 | 8.4:+66962114 | None:intergenic |
| GTAGTACTGCAAGTAACTGT+GGG | 0.572158 | 8.4:+66962289 | None:intergenic |
| GAGTTATATCCCACTATCCA+AGG | 0.574910 | 8.4:-66961565 | MS.gene056823:CDS |
| TCCTACAAGACCATCTAGAA+TGG | 0.579676 | 8.4:+66961870 | None:intergenic |
| CAAGTAACTGTGGGGACATG+TGG | 0.581114 | 8.4:+66962298 | None:intergenic |
| AGGAATGGATCTCCTTGCAA+AGG | 0.587585 | 8.4:-66961455 | MS.gene056823:CDS |
| AACCATCCACTCCCTTTGCA+AGG | 0.590151 | 8.4:+66961443 | None:intergenic |
| TAGGGTTCTTAGCATTAATG+TGG | 0.590455 | 8.4:+66961911 | None:intergenic |
| AGAGAAGCTTTCCCAAGGAA+TGG | 0.590563 | 8.4:-66961470 | MS.gene056823:CDS |
| GTCCGAAAAGGATTCCCGAA+AGG | 0.591415 | 8.4:+66962342 | None:intergenic |
| ATCACATTTGAAGACTGTTG+AGG | 0.597845 | 8.4:-66961509 | MS.gene056823:CDS |
| AGCTGTTGACGCTGTTGTGA+AGG | 0.598706 | 8.4:-66961587 | MS.gene056823:CDS |
| GTTCTTTACTCGATGACTGG+AGG | 0.600909 | 8.4:-66961936 | MS.gene056823:CDS |
| TGTGCCTGACATGCATTCAT+GGG | 0.608851 | 8.4:-66961701 | MS.gene056823:CDS |
| TTTGTCATCCCAAACACTCA+CGG | 0.615920 | 8.4:+66962113 | None:intergenic |
| GGCTGGGCCTAAATTGTGCA+AGG | 0.623051 | 8.4:+66961984 | None:intergenic |
| ACACTTTGCTATCGTCTCTG+AGG | 0.623338 | 8.4:-66961393 | MS.gene056823:CDS |
| AAGTCATCCAAGACAAGCTG+AGG | 0.623900 | 8.4:+66962202 | None:intergenic |
| TGTAGTACTGCAAGTAACTG+TGG | 0.625004 | 8.4:+66962288 | None:intergenic |
| GCAAGCTATGTATGGAGTCA+AGG | 0.627369 | 8.4:-66961797 | MS.gene056823:CDS |
| TTAGAGTTAGGTTCTCCGGT+GGG | 0.628606 | 8.4:-66961636 | MS.gene056823:CDS |
| TTGTGCAAGGCACACTTAAG+CGG | 0.629745 | 8.4:+66961997 | None:intergenic |
| ATTAGAGTTAGGTTCTCCGG+TGG | 0.639898 | 8.4:-66961637 | MS.gene056823:CDS |
| CAATACAGAAAATTTCCCAC+CGG | 0.653582 | 8.4:+66961621 | None:intergenic |
| GCTGCAGAGAAGCTTTCCCA+AGG | 0.657770 | 8.4:-66961475 | MS.gene056823:CDS |
| CCGAAGAAACGACTTTGATG+AGG | 0.660900 | 8.4:+66961963 | None:intergenic |
| CGGACAAAGTCACATAAAGG+CGG | 0.670493 | 8.4:-66962324 | MS.gene056823:CDS |
| GACTGTTGAGGAATTAGGCG+TGG | 0.680712 | 8.4:-66961497 | MS.gene056823:CDS |
| AGCTATGTATGGAGTCAAGG+TGG | 0.695929 | 8.4:-66961794 | MS.gene056823:CDS |
| TCGAGGCTACATTAGCAGAG+AGG | 0.703141 | 8.4:-66962260 | MS.gene056823:CDS |
| AAGTAACTGTGGGGACATGT+GGG | 0.704145 | 8.4:+66962299 | None:intergenic |
| TAGTACTGCAAGTAACTGTG+GGG | 0.765299 | 8.4:+66962290 | None:intergenic |
| TTATATCCCACTATCCAAGG+TGG | 0.780218 | 8.4:-66961562 | MS.gene056823:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TAAATGAGGAAATTAGAGTT+AGG | - | chr8.4:66962066-66962085 | MS.gene056823:CDS | 25.0% |
| AAGGTTAAAAATTCTGCCAA+AGG | - | chr8.4:66961882-66961901 | MS.gene056823:CDS | 30.0% | |
| CTTACAGAATCTTGTAAATG+AGG | - | chr8.4:66962052-66962071 | MS.gene056823:CDS | 30.0% | |
| TAAAAATTCTGCCAAAGGTA+AGG | - | chr8.4:66961887-66961906 | MS.gene056823:CDS | 30.0% | |
| TGCTACATTTCTCAATTCTA+GGG | + | chr8.4:66961824-66961843 | None:intergenic | 30.0% | |
| ! | TTGGCAGAATTTTTAACCTT+AGG | + | chr8.4:66961882-66961901 | None:intergenic | 30.0% |
| !! | ATTTTCTGTATTGATCGAGT+TGG | - | chr8.4:66962103-66962122 | MS.gene056823:CDS | 30.0% |
| AAATGTAGCACCATTCTAGA+TGG | - | chr8.4:66961834-66961853 | MS.gene056823:CDS | 35.0% | |
| ATCACATTTGAAGACTGTTG+AGG | - | chr8.4:66962205-66962224 | MS.gene056823:CDS | 35.0% | |
| CAATACAGAAAATTTCCCAC+CGG | + | chr8.4:66962096-66962115 | None:intergenic | 35.0% | |
| CAGCTCAAGATCTGTTATAA+GGG | + | chr8.4:66961580-66961599 | None:intergenic | 35.0% | |
| GAAATTAGAGTTAGGTTCTC+CGG | - | chr8.4:66962074-66962093 | MS.gene056823:CDS | 35.0% | |
| GTGCTACATTTCTCAATTCT+AGG | + | chr8.4:66961825-66961844 | None:intergenic | 35.0% | |
| TAGGGTTCTTAGCATTAATG+TGG | + | chr8.4:66961806-66961825 | None:intergenic | 35.0% | |
| TTATGTGACTTTGTCCGAAA+AGG | + | chr8.4:66961387-66961406 | None:intergenic | 35.0% | |
| TTCAAAGAAGTTGCTAGACT+TGG | - | chr8.4:66961989-66962008 | MS.gene056823:CDS | 35.0% | |
| TTCTTGCTCAACTTTGTCTT+CGG | + | chr8.4:66962186-66962205 | None:intergenic | 35.0% | |
| TTGAAGACTGTTGAGGAATT+AGG | - | chr8.4:66962212-66962231 | MS.gene056823:CDS | 35.0% | |
| TTGCATCAAAACCTTACCTT+TGG | + | chr8.4:66961901-66961920 | None:intergenic | 35.0% | |
| TTTCGGACAAAGTCACATAA+AGG | - | chr8.4:66961387-66961406 | MS.gene056823:CDS | 35.0% | |
| ! | CTACTTGCTGATCTATGTTT+CGG | + | chr8.4:66962379-66962398 | None:intergenic | 35.0% |
| ! | TTCTGTAAGCCTTTAAAAGC+AGG | + | chr8.4:66962041-66962060 | None:intergenic | 35.0% |
| !! | GTTTTGATGCAAGCTATGTA+TGG | - | chr8.4:66961909-66961928 | MS.gene056823:CDS | 35.0% |
| AAAGGGAAGAAAGAACGGTT+TGG | + | chr8.4:66961357-66961376 | None:intergenic | 40.0% | |
| AACCGTTCTTTCTTCCCTTT+CGG | - | chr8.4:66961357-66961376 | MS.gene056823:CDS | 40.0% | |
| AAGGGAAGAAAGAACGGTTT+GGG | + | chr8.4:66961356-66961375 | None:intergenic | 40.0% | |
| AAGTGTGCCTTGCACAATTT+AGG | - | chr8.4:66961723-66961742 | MS.gene056823:CDS | 40.0% | |
| ACTGTAAATGATCGTGTCGT+TGG | - | chr8.4:66962353-66962372 | MS.gene056823:CDS | 40.0% | |
| AGGATCACTTGATCTTCCTA+AGG | - | chr8.4:66961863-66961882 | MS.gene056823:CDS | 40.0% | |
| AGGATTTCATCCTTGCTTTC+GGG | + | chr8.4:66961495-66961514 | None:intergenic | 40.0% | |
| ATGAAATCCTCAGCTTGTCT+TGG | - | chr8.4:66961505-66961524 | MS.gene056823:CDS | 40.0% | |
| ATTTACACCACCTTGGATAG+TGG | + | chr8.4:66962162-66962181 | None:intergenic | 40.0% | |
| CAGTTACTTGCAGTACTACA+TGG | - | chr8.4:66961429-66961448 | MS.gene056823:CDS | 40.0% | |
| CATGTTCTTTACTCGATGAC+TGG | - | chr8.4:66961775-66961794 | MS.gene056823:CDS | 40.0% | |
| CCTCATCAAAGTCGTTTCTT+CGG | - | chr8.4:66961751-66961770 | MS.gene056823:CDS | 40.0% | |
| CTCATCAAAGTCGTTTCTTC+GGG | - | chr8.4:66961752-66961771 | MS.gene056823:CDS | 40.0% | |
| GAGGATTTCATCCTTGCTTT+CGG | + | chr8.4:66961496-66961515 | None:intergenic | 40.0% | |
| GAGTTATATCCCACTATCCA+AGG | - | chr8.4:66962149-66962168 | MS.gene056823:CDS | 40.0% | |
| GCAGCTCAAGATCTGTTATA+AGG | + | chr8.4:66961581-66961600 | None:intergenic | 40.0% | |
| GTAGTACTGCAAGTAACTGT+GGG | + | chr8.4:66961428-66961447 | None:intergenic | 40.0% | |
| TAGTACTGCAAGTAACTGTG+GGG | + | chr8.4:66961427-66961446 | None:intergenic | 40.0% | |
| TCCTACAAGACCATCTAGAA+TGG | + | chr8.4:66961847-66961866 | None:intergenic | 40.0% | |
| TGTAGTACTGCAAGTAACTG+TGG | + | chr8.4:66961429-66961448 | None:intergenic | 40.0% | |
| TTATATCCCACTATCCAAGG+TGG | - | chr8.4:66962152-66962171 | MS.gene056823:CDS | 40.0% | |
| TTTACACCACCTTGGATAGT+GGG | + | chr8.4:66962161-66962180 | None:intergenic | 40.0% | |
| TTTGTCATCCCAAACACTCA+CGG | + | chr8.4:66961604-66961623 | None:intergenic | 40.0% | |
| ! | GAGTGTTTGGGATGACAAAT+GGG | - | chr8.4:66961605-66961624 | MS.gene056823:CDS | 40.0% |
| ! | TGAGTGTTTGGGATGACAAA+TGG | - | chr8.4:66961604-66961623 | MS.gene056823:CDS | 40.0% |
| !! | ACCATTCTAGATGGTCTTGT+AGG | - | chr8.4:66961843-66961862 | MS.gene056823:CDS | 40.0% |
| AAGTAACTGTGGGGACATGT+GGG | + | chr8.4:66961418-66961437 | None:intergenic | 45.0% | |
| AAGTCATCCAAGACAAGCTG+AGG | + | chr8.4:66961515-66961534 | None:intergenic | 45.0% | |
| ACCGTTCTTTCTTCCCTTTC+GGG | - | chr8.4:66961358-66961377 | MS.gene056823:CDS | 45.0% | |
| AGAAACGACTTTGATGAGGC+TGG | + | chr8.4:66961750-66961769 | None:intergenic | 45.0% | |
| AGAGAAGCTTTCCCAAGGAA+TGG | - | chr8.4:66962244-66962263 | MS.gene056823:CDS | 45.0% | |
| AGCTATGTATGGAGTCAAGG+TGG | - | chr8.4:66961920-66961939 | MS.gene056823:CDS | 45.0% | |
| AGGAATGGATCTCCTTGCAA+AGG | - | chr8.4:66962259-66962278 | MS.gene056823:CDS | 45.0% | |
| ATGTGCCTGACATGCATTCA+TGG | - | chr8.4:66962012-66962031 | MS.gene056823:CDS | 45.0% | |
| ATTAGAGTTAGGTTCTCCGG+TGG | - | chr8.4:66962077-66962096 | MS.gene056823:CDS | 45.0% | |
| CAGCTTGTCTTGGATGACTT+CGG | - | chr8.4:66961515-66961534 | MS.gene056823:CDS | 45.0% | |
| CCGAAGAAACGACTTTGATG+AGG | + | chr8.4:66961754-66961773 | None:intergenic | 45.0% | |
| CGGACAAAGTCACATAAAGG+CGG | - | chr8.4:66961390-66961409 | MS.gene056823:CDS | 45.0% | |
| CTACATTAGCAGAGAGGCTA+AGG | - | chr8.4:66961460-66961479 | MS.gene056823:CDS | 45.0% | |
| CTTCGGTATTTACACCACCT+TGG | + | chr8.4:66962169-66962188 | None:intergenic | 45.0% | |
| GAAACGACTTTGATGAGGCT+GGG | + | chr8.4:66961749-66961768 | None:intergenic | 45.0% | |
| GAGCTTTCTCGTCTGAATCA+AGG | - | chr8.4:66961687-66961706 | MS.gene056823:CDS | 45.0% | |
| GCAAGCTATGTATGGAGTCA+AGG | - | chr8.4:66961917-66961936 | MS.gene056823:CDS | 45.0% | |
| GGAATGGATCTCCTTGCAAA+GGG | - | chr8.4:66962260-66962279 | MS.gene056823:CDS | 45.0% | |
| GTTCTTTACTCGATGACTGG+AGG | - | chr8.4:66961778-66961797 | MS.gene056823:CDS | 45.0% | |
| TCCCGAAAGGGAAGAAAGAA+CGG | + | chr8.4:66961362-66961381 | None:intergenic | 45.0% | |
| TCCGAAAAGGATTCCCGAAA+GGG | + | chr8.4:66961374-66961393 | None:intergenic | 45.0% | |
| TGCAAGGAGATCCATTCCTT+GGG | + | chr8.4:66962258-66962277 | None:intergenic | 45.0% | |
| TGCAGTACTACATGGTTTCG+AGG | - | chr8.4:66961437-66961456 | MS.gene056823:CDS | 45.0% | |
| TGTGCCTGACATGCATTCAT+GGG | - | chr8.4:66962013-66962032 | MS.gene056823:CDS | 45.0% | |
| TTAGAGTTAGGTTCTCCGGT+GGG | - | chr8.4:66962078-66962097 | MS.gene056823:CDS | 45.0% | |
| TTGCAAGGAGATCCATTCCT+TGG | + | chr8.4:66962259-66962278 | None:intergenic | 45.0% | |
| TTGTCATCCCAAACACTCAC+GGG | + | chr8.4:66961603-66961622 | None:intergenic | 45.0% | |
| TTGTGCAAGGCACACTTAAG+CGG | + | chr8.4:66961720-66961739 | None:intergenic | 45.0% | |
| ! | AAGAAAGAACGGTTTGGGTG+TGG | + | chr8.4:66961351-66961370 | None:intergenic | 45.0% |
| ! | ACACTTTGCTATCGTCTCTG+AGG | - | chr8.4:66962321-66962340 | MS.gene056823:CDS | 45.0% |
| ! | CACGACTAGTCAAAACTGCT+TGG | + | chr8.4:66962301-66962320 | None:intergenic | 45.0% |
| ! | GTGTTTTCTGCAGCATTCTC+TGG | - | chr8.4:66961963-66961982 | MS.gene056823:CDS | 45.0% |
| ! | TCCCTTTCGGGAATCCTTTT+CGG | - | chr8.4:66961370-66961389 | MS.gene056823:CDS | 45.0% |
| !! | TTGCTATCGTCTCTGAGGTT+TGG | - | chr8.4:66962326-66962345 | MS.gene056823:CDS | 45.0% |
| AACCATCCACTCCCTTTGCA+AGG | + | chr8.4:66962274-66962293 | None:intergenic | 50.0% | |
| AGCTGTTGACGCTGTTGTGA+AGG | - | chr8.4:66962127-66962146 | MS.gene056823:CDS | 50.0% | |
| CAAGTAACTGTGGGGACATG+TGG | + | chr8.4:66961419-66961438 | None:intergenic | 50.0% | |
| GAAGCTTATGCCCGAAAGCA+AGG | - | chr8.4:66961482-66961501 | MS.gene056823:CDS | 50.0% | |
| GACTGTTGAGGAATTAGGCG+TGG | - | chr8.4:66962217-66962236 | MS.gene056823:CDS | 50.0% | |
| GTCCGAAAAGGATTCCCGAA+AGG | + | chr8.4:66961375-66961394 | None:intergenic | 50.0% | |
| TCGAGGCTACATTAGCAGAG+AGG | - | chr8.4:66961454-66961473 | MS.gene056823:CDS | 50.0% | |
| !! | TCATGGGCGCCTGCTTTTAA+AGG | - | chr8.4:66962029-66962048 | MS.gene056823:CDS | 50.0% |
| CTCCTTGCAAAGGGAGTGGA+TGG | - | chr8.4:66962269-66962288 | MS.gene056823:CDS | 55.0% | |
| GCTGCAGAGAAGCTTTCCCA+AGG | - | chr8.4:66962239-66962258 | MS.gene056823:CDS | 55.0% | |
| GGATCTCCTTGCAAAGGGAG+TGG | - | chr8.4:66962265-66962284 | MS.gene056823:CDS | 55.0% | |
| GGCTGGGCCTAAATTGTGCA+AGG | + | chr8.4:66961733-66961752 | None:intergenic | 55.0% | |
| TGAGCTGCCCGTGAGTGTTT+GGG | - | chr8.4:66961593-66961612 | MS.gene056823:CDS | 55.0% | |
| TTGAGCTGCCCGTGAGTGTT+TGG | - | chr8.4:66961592-66961611 | MS.gene056823:CDS | 55.0% | |
| GGCGCCCATGAATGCATGTC+AGG | + | chr8.4:66962020-66962039 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 66961330 | 66962406 | 66961330 | ID=MS.gene056823 |
| chr8.4 | mRNA | 66961330 | 66962406 | 66961330 | ID=MS.gene056823.t1;Parent=MS.gene056823 |
| chr8.4 | exon | 66961330 | 66962406 | 66961330 | ID=MS.gene056823.t1.exon1;Parent=MS.gene056823.t1 |
| chr8.4 | CDS | 66961330 | 66962406 | 66961330 | ID=cds.MS.gene056823.t1;Parent=MS.gene056823.t1 |
| Gene Sequence |
| Protein sequence |
