AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056855

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056855.t1 MTR_1g060500 92.201 359 25 1 1 356 1 359 0.0 667
MS.gene056855.t1 MTR_1g060490 73.034 356 88 3 1 356 1 348 0.0 527
MS.gene056855.t1 MTR_1g060520 72.191 356 66 2 1 356 1 323 0.0 521
MS.gene056855.t1 MTR_7g104220 57.018 342 134 7 19 356 22 354 5.82e-136 391
MS.gene056855.t1 MTR_1g092740 48.726 314 144 6 40 347 38 340 8.74e-102 304
MS.gene056855.t1 MTR_1g092760 45.062 324 162 5 38 356 37 349 5.13e-89 271
MS.gene056855.t1 MTR_1g092750 45.312 320 157 6 35 347 35 343 2.80e-88 270
MS.gene056855.t1 MTR_1g092690 41.329 346 187 5 7 347 18 352 3.77e-87 267
MS.gene056855.t1 MTR_1g060530 82.143 84 15 0 181 264 31 114 2.10e-43 147
MS.gene056855.t1 MTR_2g044100 30.812 357 197 14 8 336 14 348 5.94e-34 129
MS.gene056855.t1 MTR_8g022810 27.095 358 225 14 9 346 14 355 2.38e-33 127
MS.gene056855.t1 MTR_3g098270 30.218 321 186 11 41 337 35 341 3.73e-33 127
MS.gene056855.t1 MTR_5g084750 29.395 347 209 13 10 336 3 333 1.03e-31 122
MS.gene056855.t1 MTR_3g082830 30.117 342 194 11 41 356 39 361 2.74e-31 121
MS.gene056855.t1 MTR_5g084790 30.130 385 208 15 1 355 1 354 3.10e-31 121
MS.gene056855.t1 MTR_8g031390 29.430 316 189 12 41 338 38 337 9.49e-31 120
MS.gene056855.t1 MTR_4g035353 28.022 364 204 15 7 342 12 345 9.53e-31 120
MS.gene056855.t1 MTR_5g084770 30.499 341 185 15 41 351 29 347 1.68e-30 119
MS.gene056855.t1 MTR_8g022790 29.345 351 201 14 8 336 7 332 1.10e-29 117
MS.gene056855.t1 MTR_5g009100 29.968 317 183 13 42 335 48 348 1.30e-29 117
MS.gene056855.t1 MTR_1g092710 35.859 198 92 7 153 347 3 168 1.79e-29 112
MS.gene056855.t1 MTR_8g031400 29.114 316 191 12 41 338 38 338 1.83e-28 114
MS.gene056855.t1 MTR_3g005660 28.793 323 186 12 41 336 37 342 3.53e-28 113
MS.gene056855.t1 MTR_3g024510 25.946 370 226 13 11 354 15 362 1.19e-27 112
MS.gene056855.t1 MTR_7g116870 27.492 331 198 11 39 338 32 351 1.52e-27 111
MS.gene056855.t1 MTR_8g028160 25.893 336 201 10 39 338 35 358 2.87e-27 111
MS.gene056855.t1 MTR_2g015080 29.275 345 202 17 27 343 27 357 2.87e-27 110
MS.gene056855.t1 MTR_8g075230 27.778 360 222 14 5 342 2 345 2.97e-27 110
MS.gene056855.t1 MTR_5g022630 30.172 348 208 13 14 340 19 352 1.07e-26 109
MS.gene056855.t1 MTR_8g031430 29.114 316 191 13 41 338 38 338 1.75e-26 108
MS.gene056855.t1 MTR_1g079530 27.222 360 214 13 7 346 5 336 6.64e-26 107
MS.gene056855.t1 MTR_0565s0010 25.745 369 222 15 13 354 14 357 1.44e-25 105
MS.gene056855.t1 MTR_3g464730 28.947 342 197 12 41 355 29 351 3.44e-25 104
MS.gene056855.t1 MTR_1g025760 26.525 377 239 15 1 355 42 402 3.50e-25 105
MS.gene056855.t1 MTR_1g079540 25.833 360 225 12 9 346 5 344 3.87e-25 104
MS.gene056855.t1 MTR_7g116510 25.904 332 210 12 39 348 24 341 4.69e-25 104
MS.gene056855.t1 MTR_3g021460 27.707 314 188 10 41 337 32 323 5.43e-25 104
MS.gene056855.t1 MTR_2g017965 29.012 324 182 15 41 340 34 333 1.23e-24 103
MS.gene056855.t1 MTR_8g031390 29.433 282 170 11 41 304 38 308 1.51e-24 102
MS.gene056855.t1 MTR_7g116520 26.543 324 193 11 39 336 33 337 2.31e-24 102
MS.gene056855.t1 MTR_5g083040 25.378 331 211 9 38 344 30 348 2.96e-24 102
MS.gene056855.t1 MTR_2g461580 26.625 323 197 11 41 346 32 331 3.45e-24 102
MS.gene056855.t1 MTR_1g069175 25.816 337 217 12 31 346 24 348 4.47e-24 102
MS.gene056855.t1 MTR_0009s0250 27.129 317 198 13 41 343 34 331 4.86e-24 101
MS.gene056855.t1 MTR_3g052580 25.305 328 209 14 41 346 29 342 5.39e-24 102
MS.gene056855.t1 MTR_3g052580 25.305 328 209 14 41 346 28 341 6.21e-24 102
MS.gene056855.t1 MTR_8g031420 26.836 354 209 16 7 338 11 336 1.10e-23 100
MS.gene056855.t1 MTR_5g022640 27.607 326 204 11 35 340 38 351 2.47e-23 99.8
MS.gene056855.t1 MTR_3g052490 26.911 327 206 14 41 346 33 347 2.98e-23 99.8
MS.gene056855.t1 MTR_2g033930 29.022 317 193 15 41 338 33 336 5.56e-23 99.0
MS.gene056855.t1 MTR_8g079050 24.926 337 211 13 42 350 39 361 6.78e-23 98.6
MS.gene056855.t1 MTR_3g114090 27.011 348 219 15 28 355 26 358 1.84e-22 97.4
MS.gene056855.t1 MTR_3g052480 26.364 330 205 15 41 346 34 349 1.91e-22 97.4
MS.gene056855.t1 MTR_2g084585 27.914 326 202 12 41 346 31 343 2.02e-22 97.1
MS.gene056855.t1 MTR_3g005650 26.019 319 196 11 40 337 30 329 2.23e-22 97.1
MS.gene056855.t1 MTR_1g030275 24.734 376 236 13 1 346 7 365 2.31e-22 97.4
MS.gene056855.t1 MTR_4g056160 28.261 322 191 13 41 337 28 334 5.66e-22 95.9
MS.gene056855.t1 MTR_1g025720 25.068 367 238 14 9 355 9 358 6.25e-22 95.9
MS.gene056855.t1 MTR_5g074270 27.976 336 195 17 41 347 34 351 6.39e-22 95.9
MS.gene056855.t1 MTR_4g056280 29.022 317 192 13 41 337 31 334 1.43e-21 94.7
MS.gene056855.t1 MTR_4g108690 26.074 326 212 10 42 349 29 343 1.54e-21 94.7
MS.gene056855.t1 MTR_2g017955 28.571 322 189 13 41 342 34 334 3.46e-21 94.0
MS.gene056855.t1 MTR_1g025780 24.179 335 219 12 41 355 42 361 3.56e-21 93.6
MS.gene056855.t1 MTR_6g021530 23.823 361 223 13 13 346 8 343 4.56e-21 93.6
MS.gene056855.t1 MTR_1g030230 23.577 369 232 13 13 347 9 361 5.61e-21 93.2
MS.gene056855.t1 MTR_5g078210 25.076 327 203 13 42 345 27 334 1.04e-20 92.0
MS.gene056855.t1 MTR_7g116500 25.770 357 221 14 1 335 1 335 1.26e-20 92.0
MS.gene056855.t1 MTR_1g030268 24.933 373 234 14 5 347 11 367 1.74e-20 92.0
MS.gene056855.t1 MTR_7g033150 24.457 368 232 10 16 346 10 368 1.88e-20 92.0
MS.gene056855.t1 MTR_1g025700 26.048 334 213 13 41 354 51 370 2.15e-20 91.7
MS.gene056855.t1 MTR_1g025680 26.822 343 216 15 15 337 11 338 2.43e-20 92.0
MS.gene056855.t1 MTR_1g030220 25.439 342 209 10 39 346 39 368 2.52e-20 91.7
MS.gene056855.t1 MTR_8g089805 23.464 358 219 10 28 346 30 371 3.49e-20 91.3
MS.gene056855.t1 MTR_8g075220 27.299 348 203 15 35 351 35 363 4.98e-20 90.5
MS.gene056855.t1 MTR_2g100620 28.173 323 190 12 41 338 32 337 5.20e-20 90.1
MS.gene056855.t1 MTR_8g087890 23.851 348 205 13 42 354 33 355 6.39e-20 90.1
MS.gene056855.t1 MTR_3g435540 25.532 329 210 11 42 349 25 339 9.58e-20 89.7
MS.gene056855.t1 MTR_8g014910 27.624 362 204 14 5 338 7 338 1.10e-19 89.4
MS.gene056855.t1 MTR_4g019880 25.496 353 210 15 9 336 13 337 1.17e-19 89.4
MS.gene056855.t1 MTR_2g015580 25.076 331 213 9 39 342 46 368 1.18e-19 89.7
MS.gene056855.t1 MTR_4g104240 25.066 379 212 16 7 344 10 357 1.41e-19 89.4
MS.gene056855.t1 MTR_3g438030 27.114 343 193 15 37 342 27 349 1.46e-19 89.4
MS.gene056855.t1 MTR_8g087870 28.616 318 179 15 41 336 30 321 1.69e-19 88.6
MS.gene056855.t1 MTR_4g122200 27.964 329 197 16 42 346 37 349 1.88e-19 89.0
MS.gene056855.t1 MTR_2g015630 25.672 335 208 12 45 348 36 360 2.05e-19 89.0
MS.gene056855.t1 MTR_8g075200 27.326 344 203 14 35 351 36 359 3.11e-19 88.6
MS.gene056855.t1 MTR_1g025910 25.610 328 213 9 45 354 41 355 4.21e-19 87.8
MS.gene056855.t1 MTR_3g023220 29.179 329 165 19 41 338 34 325 5.68e-19 87.4
MS.gene056855.t1 MTR_8g022810 30.000 230 135 10 9 222 14 233 1.55e-18 85.5
MS.gene056855.t1 MTR_2g015670 26.822 343 192 13 36 346 27 342 1.55e-18 85.9
MS.gene056855.t1 MTR_2g017925 28.076 317 184 12 41 337 34 326 1.86e-18 85.9
MS.gene056855.t1 MTR_3g448360 25.513 341 210 13 37 346 26 353 2.01e-18 85.9
MS.gene056855.t1 MTR_5g093090 25.705 319 204 13 41 338 29 335 2.88e-18 85.5
MS.gene056855.t1 MTR_3g114120 27.692 325 199 14 41 346 48 355 1.12e-17 83.6
MS.gene056855.t1 MTR_2g015590 25.680 331 204 10 39 338 30 349 2.30e-17 82.8
MS.gene056855.t1 MTR_2g015650 25.067 371 224 13 13 346 3 356 2.79e-17 82.4
MS.gene056855.t1 MTR_7g008060 22.343 367 217 12 6 346 9 333 2.96e-17 82.4
MS.gene056855.t1 MTR_3g069520 26.113 337 202 14 37 342 27 347 8.50e-17 81.3
MS.gene056855.t1 MTR_2g043980 25.000 368 209 15 6 342 8 339 2.53e-16 79.7
MS.gene056855.t1 MTR_7g113860 25.698 358 213 15 26 346 17 358 8.05e-16 78.2
MS.gene056855.t1 MTR_6g007095 23.370 368 236 11 1 336 1 354 8.16e-16 79.3
MS.gene056855.t1 MTR_2g017875 26.536 358 188 17 41 354 35 361 1.23e-15 77.4
MS.gene056855.t1 MTR_0029s0050 25.373 335 193 15 39 342 29 337 1.23e-15 77.4
MS.gene056855.t1 MTR_0029s0100 26.113 337 188 16 39 342 29 337 1.83e-15 77.0
MS.gene056855.t1 MTR_5g078210 25.188 266 167 10 42 284 27 283 1.98e-15 76.6
MS.gene056855.t1 MTR_8g074560 25.000 352 222 14 10 336 5 339 4.52e-15 75.9
MS.gene056855.t1 MTR_2g017915 24.845 322 175 11 41 339 34 311 3.46e-14 73.2
MS.gene056855.t1 MTR_8g038680 22.647 340 214 11 37 338 20 348 6.05e-14 72.8
MS.gene056855.t1 MTR_7g111780 24.773 331 189 11 41 338 37 340 3.90e-13 70.1
MS.gene056855.t1 MTR_6g007100 22.493 369 219 16 1 336 1 335 5.93e-13 69.7
MS.gene056855.t1 MTR_2g015590 25.912 274 170 7 39 284 30 298 6.37e-13 69.3
MS.gene056855.t1 MTR_1g082390 28.704 324 178 17 1 294 1 301 7.14e-13 69.3
MS.gene056855.t1 MTR_1g030268 24.104 307 191 11 5 284 11 302 1.20e-12 68.6
MS.gene056855.t1 MTR_6g007090 21.809 376 234 13 1 338 1 354 2.39e-12 67.8
MS.gene056855.t1 MTR_7g113860 24.581 358 217 15 26 346 23 364 1.05e-11 65.9
MS.gene056855.t1 MTR_1g079590 28.652 178 104 8 36 194 27 200 1.20e-11 63.9
MS.gene056855.t1 MTR_7g033165 24.179 335 203 13 41 338 34 354 1.33e-11 65.5
MS.gene056855.t1 MTR_5g093090 25.660 265 176 10 41 286 29 291 1.64e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056855.t1 AT5G03610 52.247 356 156 8 1 348 1 350 2.43e-120 352
MS.gene056855.t1 AT3G09930 48.254 315 151 7 40 348 39 347 3.71e-102 305
MS.gene056855.t1 AT3G09930 48.254 315 151 7 40 348 39 347 3.71e-102 305
MS.gene056855.t1 AT5G03600 42.493 353 171 13 3 346 17 346 7.08e-81 251
MS.gene056855.t1 AT5G03600 43.252 326 160 11 30 346 2 311 2.70e-80 248
MS.gene056855.t1 AT2G36325 37.309 327 188 9 27 346 34 350 1.47e-71 227
MS.gene056855.t1 AT5G03590 36.735 294 133 9 61 348 7 253 4.76e-58 189
MS.gene056855.t1 AT5G03590 31.058 293 120 9 61 348 7 222 5.10e-43 149
MS.gene056855.t1 AT5G03590 41.089 202 101 7 6 199 2 193 3.14e-37 133
MS.gene056855.t1 AT1G53920 28.134 359 219 13 8 344 18 359 6.30e-34 129
MS.gene056855.t1 AT5G41890 29.721 323 194 13 42 338 33 348 7.54e-31 120
MS.gene056855.t1 AT2G40250 29.394 330 196 11 37 342 33 349 7.64e-31 120
MS.gene056855.t1 AT1G20130 30.564 337 198 10 41 352 185 510 2.20e-30 121
MS.gene056855.t1 AT1G20130 30.564 337 198 10 41 352 205 530 2.49e-30 121
MS.gene056855.t1 AT5G08460 28.375 363 214 15 1 337 15 357 4.45e-30 119
MS.gene056855.t1 AT2G04570 29.730 333 187 12 41 346 29 341 8.22e-30 117
MS.gene056855.t1 AT1G28640 27.246 334 193 12 39 337 34 352 5.29e-29 115
MS.gene056855.t1 AT4G10950 29.141 326 180 14 41 337 72 375 1.22e-28 115
MS.gene056855.t1 AT2G31540 28.571 343 198 13 35 347 26 351 1.54e-28 114
MS.gene056855.t1 AT1G58430 29.341 334 195 13 41 349 36 353 3.77e-28 113
MS.gene056855.t1 AT2G30310 27.397 365 220 15 11 349 7 352 7.90e-28 112
MS.gene056855.t1 AT3G14820 28.358 335 213 10 30 349 22 344 2.03e-27 110
MS.gene056855.t1 AT1G29660 27.838 370 218 18 12 354 9 356 2.50e-27 110
MS.gene056855.t1 AT2G19060 28.344 314 196 11 42 342 32 329 3.94e-27 110
MS.gene056855.t1 AT5G40990 29.630 324 183 13 41 336 38 344 4.34e-27 110
MS.gene056855.t1 AT5G42170 27.640 322 205 10 41 346 51 360 1.24e-26 108
MS.gene056855.t1 AT2G03980 27.445 317 193 12 41 336 44 344 1.76e-26 108
MS.gene056855.t1 AT2G03980 27.445 317 193 12 41 336 44 344 1.76e-26 108
MS.gene056855.t1 AT2G03980 27.445 317 193 12 41 336 44 344 1.76e-26 108
MS.gene056855.t1 AT2G03980 27.445 317 193 12 41 336 44 344 1.76e-26 108
MS.gene056855.t1 AT1G71250 26.959 319 194 11 41 336 42 344 3.64e-26 107
MS.gene056855.t1 AT4G10950 28.834 326 177 15 41 337 72 371 3.64e-26 108
MS.gene056855.t1 AT3G14225 29.538 325 186 14 41 336 38 348 4.44e-26 107
MS.gene056855.t1 AT2G27360 27.487 382 211 13 1 342 1 356 7.04e-26 107
MS.gene056855.t1 AT5G33370 27.066 351 220 13 17 346 8 343 8.41e-26 106
MS.gene056855.t1 AT1G75890 28.889 360 202 14 7 340 24 355 8.49e-26 106
MS.gene056855.t1 AT1G06990 27.160 324 194 11 41 339 38 344 9.54e-26 106
MS.gene056855.t1 AT4G26790 29.118 340 190 14 41 351 30 347 1.02e-25 106
MS.gene056855.t1 AT4G26790 29.118 340 190 14 41 351 30 347 1.02e-25 106
MS.gene056855.t1 AT1G33811 26.050 357 219 11 7 336 4 342 1.13e-25 106
MS.gene056855.t1 AT1G71691 27.160 324 183 10 41 336 56 354 1.15e-25 106
MS.gene056855.t1 AT1G20132 27.515 338 216 11 35 354 56 382 1.18e-25 106
MS.gene056855.t1 AT3G14225 29.907 321 186 14 41 336 38 344 1.21e-25 106
MS.gene056855.t1 AT5G45950 26.705 352 227 12 8 342 6 343 1.31e-25 106
MS.gene056855.t1 AT1G75890 28.889 360 202 14 7 340 53 384 1.45e-25 106
MS.gene056855.t1 AT1G54020 30.094 319 190 13 35 341 28 325 2.00e-25 105
MS.gene056855.t1 AT5G15720 28.173 323 193 13 38 336 28 335 2.57e-25 105
MS.gene056855.t1 AT5G18430 27.557 352 210 12 11 336 1 333 5.59e-25 104
MS.gene056855.t1 AT1G75920 28.045 353 208 13 15 346 7 334 6.84e-25 103
MS.gene056855.t1 AT1G59406 25.895 363 232 12 10 354 5 348 8.41e-25 103
MS.gene056855.t1 AT1G59030 25.895 363 232 12 10 354 5 348 8.41e-25 103
MS.gene056855.t1 AT1G58725 25.895 363 232 12 10 354 5 348 8.41e-25 103
MS.gene056855.t1 AT1G54000 28.116 345 215 13 1 333 2 325 1.55e-24 103
MS.gene056855.t1 AT1G54030 28.155 309 188 11 38 336 50 334 2.12e-24 103
MS.gene056855.t1 AT2G24560 27.005 374 210 17 11 349 7 352 3.21e-24 102
MS.gene056855.t1 AT2G42990 27.684 354 197 13 10 336 10 331 3.23e-24 102
MS.gene056855.t1 AT1G29670 25.806 372 221 15 7 352 11 353 3.34e-24 102
MS.gene056855.t1 AT5G22810 29.874 318 193 10 41 338 35 342 4.95e-24 101
MS.gene056855.t1 AT1G54010 27.714 350 220 14 1 338 2 330 8.93e-24 101
MS.gene056855.t1 AT1G28650 24.528 371 228 13 7 342 6 359 9.28e-24 101
MS.gene056855.t1 AT1G75930 27.300 337 206 10 35 354 24 338 9.93e-24 100
MS.gene056855.t1 AT1G75890 27.968 379 194 14 7 340 24 368 1.20e-23 100
MS.gene056855.t1 AT3G48460 28.989 376 213 17 1 342 1 356 1.34e-23 100
MS.gene056855.t1 AT1G29670 25.806 372 221 15 7 352 79 421 1.37e-23 101
MS.gene056855.t1 AT1G20135 27.044 318 195 9 41 342 30 326 1.47e-23 99.8
MS.gene056855.t1 AT4G01130 28.190 337 192 14 39 338 33 356 2.19e-23 100
MS.gene056855.t1 AT2G30220 25.620 363 226 15 14 349 6 351 2.49e-23 99.8
MS.gene056855.t1 AT1G75880 27.642 369 225 11 7 351 20 370 2.74e-23 99.8
MS.gene056855.t1 AT1G73610 27.576 330 189 13 35 342 30 331 3.57e-23 99.0
MS.gene056855.t1 AT1G75900 25.895 363 233 11 13 355 18 364 4.84e-23 99.0
MS.gene056855.t1 AT5G33370 31.179 263 156 10 17 259 8 265 5.89e-23 98.2
MS.gene056855.t1 AT1G53940 25.978 358 231 13 1 336 1 346 8.14e-23 98.6
MS.gene056855.t1 AT3G53100 26.032 315 204 11 41 337 30 333 9.89e-23 97.8
MS.gene056855.t1 AT1G58520 26.036 338 199 11 41 354 31 341 1.44e-22 97.4
MS.gene056855.t1 AT1G58525 26.036 338 199 11 41 354 31 341 1.44e-22 97.4
MS.gene056855.t1 AT1G28570 24.926 337 207 12 36 339 30 353 1.51e-22 97.8
MS.gene056855.t1 AT4G28780 26.807 332 208 11 36 346 27 344 2.12e-22 97.4
MS.gene056855.t1 AT5G45960 26.254 339 207 12 36 347 43 365 2.25e-22 97.4
MS.gene056855.t1 AT1G75880 27.273 363 235 12 7 351 20 371 2.78e-22 97.1
MS.gene056855.t1 AT1G28610 26.554 354 191 15 39 348 30 358 5.81e-22 96.3
MS.gene056855.t1 AT5G45910 28.280 343 193 13 39 342 29 357 6.87e-22 95.9
MS.gene056855.t1 AT1G28600 24.668 377 224 14 1 342 1 352 6.92e-22 96.3
MS.gene056855.t1 AT3G04290 25.075 335 206 11 38 346 27 342 9.79e-22 95.5
MS.gene056855.t1 AT5G45670 24.688 320 200 12 42 337 31 333 1.13e-21 95.1
MS.gene056855.t1 AT3G16370 27.217 327 188 13 41 338 31 336 1.86e-21 94.4
MS.gene056855.t1 AT1G75920 26.902 368 208 14 15 346 2 344 3.58e-21 93.6
MS.gene056855.t1 AT1G28590 24.058 345 212 10 39 348 35 364 3.86e-21 94.0
MS.gene056855.t1 AT5G15720 28.519 270 164 11 38 284 28 291 7.07e-21 92.0
MS.gene056855.t1 AT3G14220 27.358 318 199 15 41 344 33 332 9.97e-21 92.4
MS.gene056855.t1 AT1G71691 28.205 273 151 9 40 284 55 310 1.84e-20 90.9
MS.gene056855.t1 AT1G71120 24.047 341 215 14 41 354 32 355 2.52e-20 91.3
MS.gene056855.t1 AT2G19010 27.389 314 189 14 41 337 31 322 2.64e-20 90.9
MS.gene056855.t1 AT1G28580 24.702 336 203 11 39 339 36 356 3.03e-20 91.3
MS.gene056855.t1 AT1G75910 25.352 355 219 12 13 346 5 334 4.65e-20 90.1
MS.gene056855.t1 AT5G55050 24.251 334 221 12 41 352 40 363 5.05e-20 90.5
MS.gene056855.t1 AT2G19010 27.389 314 189 14 41 337 61 352 5.25e-20 90.5
MS.gene056855.t1 AT3G14210 26.198 313 203 12 37 336 33 330 8.83e-20 90.1
MS.gene056855.t1 AT4G18970 23.824 319 204 11 42 337 30 332 1.02e-19 90.1
MS.gene056855.t1 AT4G18970 23.824 319 204 11 42 337 30 332 1.07e-19 89.4
MS.gene056855.t1 AT1G54030 29.675 246 153 9 38 275 50 283 1.14e-19 88.6
MS.gene056855.t1 AT2G19050 27.097 310 195 12 42 338 33 324 1.33e-19 89.0
MS.gene056855.t1 AT1G74460 24.924 329 212 12 42 349 25 339 1.43e-19 89.4
MS.gene056855.t1 AT1G23500 25.705 319 198 8 41 342 36 332 1.74e-19 88.6
MS.gene056855.t1 AT3G50400 24.074 324 207 11 42 338 36 347 1.89e-19 89.0
MS.gene056855.t1 AT5G37690 23.975 317 206 12 42 338 29 330 4.96e-19 87.4
MS.gene056855.t1 AT5G03820 26.359 368 229 14 1 346 1 348 5.78e-19 87.4
MS.gene056855.t1 AT5G03820 27.439 328 203 13 41 346 62 376 1.54e-18 86.3
MS.gene056855.t1 AT2G24560 28.115 313 174 15 11 290 7 301 1.76e-18 85.5
MS.gene056855.t1 AT1G67830 23.099 342 216 11 41 346 31 361 3.19e-18 85.5
MS.gene056855.t1 AT1G53940 26.667 300 197 10 2 284 3 296 5.69e-18 84.0
MS.gene056855.t1 AT1G31550 25.287 348 203 11 39 348 35 363 6.67e-18 84.7
MS.gene056855.t1 AT5G03810 26.300 327 209 12 40 346 30 344 1.02e-17 83.6
MS.gene056855.t1 AT2G19050 30.041 243 151 10 42 271 33 269 1.47e-17 82.0
MS.gene056855.t1 AT1G54790 26.567 335 205 12 44 346 36 361 2.39e-17 82.8
MS.gene056855.t1 AT1G75920 25.581 301 183 10 65 346 28 306 3.96e-17 81.6
MS.gene056855.t1 AT4G01130 28.986 276 155 11 39 284 33 297 6.59e-17 81.3
MS.gene056855.t1 AT4G30140 25.649 308 196 12 42 336 35 322 9.48e-17 80.9
MS.gene056855.t1 AT5G14450 25.069 363 213 15 15 338 20 362 1.42e-16 80.5
MS.gene056855.t1 AT1G31550 24.709 344 207 12 39 348 35 360 2.13e-16 80.1
MS.gene056855.t1 AT1G28660 23.442 337 201 13 44 342 39 356 2.37e-16 80.1
MS.gene056855.t1 AT1G75920 26.023 342 198 15 15 346 7 303 2.55e-16 79.0
MS.gene056855.t1 AT3G26430 22.340 376 244 11 4 346 2 362 3.19e-16 79.7
MS.gene056855.t1 AT1G28660 23.145 337 203 13 44 342 39 357 5.04e-16 79.0
MS.gene056855.t1 AT2G04020 26.415 212 136 7 41 237 44 250 9.40e-16 76.6
MS.gene056855.t1 AT5G63170 24.127 315 202 10 41 339 29 322 2.11e-15 76.6
MS.gene056855.t1 AT2G04020 27.094 203 128 7 41 228 44 241 2.84e-15 76.3
MS.gene056855.t1 AT1G56670 24.699 332 198 9 41 342 41 350 4.62e-15 75.9
MS.gene056855.t1 AT5G37690 23.344 317 200 13 42 338 29 322 2.48e-14 73.6
MS.gene056855.t1 AT2G31550 25.980 204 123 8 157 347 22 210 1.60e-13 69.3
MS.gene056855.t1 AT1G71691 25.926 189 117 5 157 336 79 253 2.57e-13 70.1
MS.gene056855.t1 AT4G16230 29.630 243 128 11 6 222 2 227 3.25e-13 69.3
MS.gene056855.t1 AT1G09390 23.098 368 231 11 1 342 6 347 6.76e-13 69.7
MS.gene056855.t1 AT1G56670 25.882 255 153 6 41 271 41 283 7.99e-12 65.9
MS.gene056855.t1 AT5G15720 24.542 273 170 11 88 338 48 306 2.84e-11 64.3

Find 82 sgRNAs with CRISPR-Local

Find 155 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCAATCACTCACAATTTA+TGG 0.125010 1.1:+46036446 MS.gene056855:CDS
ATCCAGAATCAAGTTTCTTT+TGG 0.188004 1.1:+46038508 MS.gene056855:CDS
ATATTGTGCAGCCAAGTATT+TGG 0.194450 1.1:+46036414 MS.gene056855:intron
AAATGACTACAATTATTATT+TGG 0.197824 1.1:+46036663 MS.gene056855:CDS
CCTAAGCATGATTTGAAGTA+TGG 0.231574 1.1:+46036484 MS.gene056855:CDS
TTGATTTGGGTTGTCACATT+TGG 0.238521 1.1:-46036559 None:intergenic
TACTTTCCATGAATCAAATA+TGG 0.261137 1.1:-46036092 None:intergenic
TTCTTGAATGAGCTTGATTA+AGG 0.268085 1.1:-46036584 None:intergenic
TCCCAAAAGAAACTTGATTC+TGG 0.276425 1.1:-46038510 None:intergenic
TGGTGTAATCATTGGTTTCT+TGG 0.320591 1.1:-46038311 None:intergenic
TACAATTATTATTTGGAAAC+AGG 0.326642 1.1:+46036670 MS.gene056855:CDS
GATTCATGGAAAGTACCTTA+TGG 0.338294 1.1:+46036100 MS.gene056855:CDS
TGATTTGGGTTGTCACATTT+GGG 0.340075 1.1:-46036558 None:intergenic
GCTTGATTAAGGAATTGATT+TGG 0.343968 1.1:-46036573 None:intergenic
TTTATTGTTATAGGAGAAAT+GGG 0.346902 1.1:+46035974 MS.gene056855:intron
GTTTATTGTTATAGGAGAAA+TGG 0.347957 1.1:+46035973 MS.gene056855:intron
CTTGATTAAGGAATTGATTT+GGG 0.349009 1.1:-46036572 None:intergenic
CCTTATGGCATGACCTTTCC+CGG 0.349880 1.1:+46036115 MS.gene056855:CDS
TCCTCAATGTTATGGCTAGA+AGG 0.358556 1.1:-46038384 None:intergenic
TATTGTGCAGCCAAGTATTT+GGG 0.361299 1.1:+46036415 MS.gene056855:intron
AAATACATAAGAGGATTAAA+AGG 0.370384 1.1:-46035734 None:intergenic
GTAGCTTATGTCTCTGTTGC+TGG 0.378940 1.1:+46036640 MS.gene056855:CDS
GTACTTGAAGTATCTTCTAT+TGG 0.380865 1.1:+46036535 MS.gene056855:CDS
TCAAACGTTCCTCAATGTTA+TGG 0.386495 1.1:-46038392 None:intergenic
TTGTAACAGATTGGTTCAAT+AGG 0.388744 1.1:-46038281 None:intergenic
TTGATTCATCTTCAAAGCTT+AGG 0.395738 1.1:+46038138 MS.gene056855:CDS
TTAGTACTTGCACTTCTCTC+AGG 0.402471 1.1:+46035759 MS.gene056855:CDS
GCTTTGAAGATGAATCAAAT+TGG 0.421198 1.1:-46038133 None:intergenic
GGTTCAACTTTGTAACAGAT+TGG 0.423602 1.1:-46038290 None:intergenic
ATCACTGATTCAATGAAAGA+TGG 0.426419 1.1:-46038096 None:intergenic
TGATTTCAATCCCAAATACT+TGG 0.428800 1.1:-46036425 None:intergenic
CCGGGAAAGGTCATGCCATA+AGG 0.446049 1.1:-46036115 None:intergenic
TTCCATAAATTGTGAGTGAT+TGG 0.450712 1.1:-46036448 None:intergenic
AACTTTGCCTACGGTGGTAC+AGG 0.462242 1.1:+46036511 MS.gene056855:CDS
AGAGACATAAGCTACAGATT+TGG 0.467339 1.1:-46036632 None:intergenic
CATTCCAACCAGCCTGTGTT+GGG 0.469175 1.1:-46038542 None:intergenic
TGTGAATGTGGTGTAATCAT+TGG 0.470335 1.1:-46038319 None:intergenic
GGAGATTCGTATGTTGATAC+CGG 0.482141 1.1:+46036055 MS.gene056855:CDS
CCGTCGGAGAATCTCCCAAC+TGG 0.483926 1.1:-46036142 None:intergenic
AGGATTTGAGAGAATTGTTG+TGG 0.484724 1.1:+46038158 MS.gene056855:CDS
ACTATTGCAACTTTGAAATG+AGG 0.493039 1.1:-46038226 None:intergenic
GGATTTGAGAGAATTGTTGT+GGG 0.499111 1.1:+46038159 MS.gene056855:CDS
CGTTTGAAGCCATGTTGCGT+TGG 0.507426 1.1:+46038408 MS.gene056855:CDS
GTACTAAGGAAATACATAAG+AGG 0.510035 1.1:-46035743 None:intergenic
GTGGGAGGTTTACAACCCCT+TGG 0.513522 1.1:+46038177 MS.gene056855:CDS
ACAGATTTGGTGATATCTAA+AGG 0.513990 1.1:-46036619 None:intergenic
CCATACTTCAAATCATGCTT+AGG 0.514717 1.1:-46036484 None:intergenic
TGAGAGAAGTGCAAGTACTA+AGG 0.515819 1.1:-46035757 None:intergenic
ATTGGTTCAATAGGTTGTTG+TGG 0.520697 1.1:-46038272 None:intergenic
ACCTTTCCCGGAAAACCAGT+TGG 0.523937 1.1:+46036127 MS.gene056855:CDS
GTAAGCAGTGAGTATAAATG+TGG 0.528517 1.1:+46038432 MS.gene056855:CDS
CCTTTCCCGGAAAACCAGTT+GGG 0.539582 1.1:+46036128 MS.gene056855:CDS
TCACTGATTCAATGAAAGAT+GGG 0.544882 1.1:-46038095 None:intergenic
GCATTCCAACCAGCCTGTGT+TGG 0.545563 1.1:-46038543 None:intergenic
CCTCAATGTTATGGCTAGAA+GGG 0.549531 1.1:-46038383 None:intergenic
GGCTTGAGGAAGACAACCAA+GGG 0.551381 1.1:-46038193 None:intergenic
TGCACCCAACACAGGCTGGT+TGG 0.551991 1.1:+46038538 MS.gene056855:CDS
GAATGCTGTGTATAATGAGT+TGG 0.561108 1.1:+46038560 MS.gene056855:CDS
TTTGAGAGAATTGTTGTGGG+AGG 0.562053 1.1:+46038162 MS.gene056855:CDS
CTGCTTACTCCAACGCAACA+TGG 0.568390 1.1:-46038417 None:intergenic
AGAAATGGGGCTGCAAGTTG+AGG 0.574508 1.1:+46035988 MS.gene056855:CDS
TTGAAATGAGGTTTCAGCAG+TGG 0.574553 1.1:-46038214 None:intergenic
AATTATTATTTGGAAACAGG+AGG 0.583609 1.1:+46036673 MS.gene056855:CDS
CAGTTGCACCCAACACAGGC+TGG 0.587629 1.1:+46038534 MS.gene056855:CDS
TTGAAGATGAATCAAATTGG+TGG 0.592268 1.1:-46038130 None:intergenic
CTAAGCATGATTTGAAGTAT+GGG 0.594118 1.1:+46036485 MS.gene056855:CDS
CCCTTCTAGCCATAACATTG+AGG 0.594859 1.1:+46038383 MS.gene056855:CDS
GTCAGTTAAAACTCTGCCGT+CGG 0.606044 1.1:-46036158 None:intergenic
GGAAACAGGAGGCGCTGTGT+CGG 0.606261 1.1:+46036684 MS.gene056855:CDS
GGTTGTTGTGGAGAGCTACA+AGG 0.616979 1.1:-46038260 None:intergenic
GAGGTTTCAGCAGTGGCTTG+AGG 0.618863 1.1:-46038207 None:intergenic
GGATCAGTTGCACCCAACAC+AGG 0.619543 1.1:+46038530 MS.gene056855:CDS
TATGGGATGAACTTTGCCTA+CGG 0.634972 1.1:+46036502 MS.gene056855:CDS
AGATTATAGAAATTTAAACA+AGG 0.656871 1.1:+46038461 MS.gene056855:CDS
GGGATGAACTTTGCCTACGG+TGG 0.663668 1.1:+46036505 MS.gene056855:CDS
AATGTCTAGAATTGTGAATG+TGG 0.664224 1.1:-46038331 None:intergenic
TTATTGTTATAGGAGAAATG+GGG 0.666821 1.1:+46035975 MS.gene056855:intron
AAGTACACCTGTACCACCGT+AGG 0.676110 1.1:-46036518 None:intergenic
TGGCTTGAGGAAGACAACCA+AGG 0.680752 1.1:-46038194 None:intergenic
CCAGTTGGGAGATTCTCCGA+CGG 0.697686 1.1:+46036142 MS.gene056855:CDS
AGGATGATTGAGATGGCGAG+TGG 0.741996 1.1:-46036011 None:intergenic
GCTTGAGGAAGACAACCAAG+GGG 0.783209 1.1:-46038192 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTATAAATCAAGTAAT+TGG + chr1.1:46037428-46037447 MS.gene056855:intron 10.0%
!! ATAAATATAGTTATATACAA+AGG + chr1.1:46036993-46037012 MS.gene056855:intron 10.0%
!!! ACATTGATAATATATTATTA+AGG - chr1.1:46036948-46036967 None:intergenic 10.0%
!!! ATGAATTTATTCAATTTTTT+TGG + chr1.1:46035793-46035812 MS.gene056855:intron 10.0%
!!! CATTGATAATATATTATTAA+GGG - chr1.1:46036947-46036966 None:intergenic 10.0%
!!! GTTTTTTAAATTTTTTGAAT+GGG + chr1.1:46036244-46036263 MS.gene056855:intron 10.0%
!!! TGTTTTTTAAATTTTTTGAA+TGG + chr1.1:46036243-46036262 MS.gene056855:intron 10.0%
!!! TTTTTTTTTGTTTTTGTAAA+TGG - chr1.1:46036857-46036876 None:intergenic 10.0%
!! AAATGACTACAATTATTATT+TGG + chr1.1:46036663-46036682 MS.gene056855:CDS 15.0%
!! AAGTTAACACTAAATATATT+TGG + chr1.1:46037103-46037122 MS.gene056855:intron 15.0%
!! AGATTATAGAAATTTAAACA+AGG + chr1.1:46038461-46038480 MS.gene056855:CDS 15.0%
!! GTAAAGTAATCTTATAAAAA+AGG + chr1.1:46037720-46037739 MS.gene056855:intron 15.0%
!! GTTATAAACATATAACTTAA+AGG - chr1.1:46037147-46037166 None:intergenic 15.0%
!! TGAAACAAAAAATAACTTAA+AGG - chr1.1:46037207-46037226 None:intergenic 15.0%
!! TGATAAAAAAAGAAACTTAA+AGG - chr1.1:46037178-46037197 None:intergenic 15.0%
!! TTGTAACTAAAAAAACTTAA+AGG + chr1.1:46037620-46037639 MS.gene056855:intron 15.0%
!!! AAGTTTTTTTAGTTACAAAT+TGG - chr1.1:46037618-46037637 None:intergenic 15.0%
!!! AGTTATTTTTTGTTTCAAAT+TGG + chr1.1:46037210-46037229 MS.gene056855:intron 15.0%
!!! ATCATATTTTCTATATTTCT+TGG + chr1.1:46036727-46036746 MS.gene056855:intron 15.0%
!!! CAATTTTTCATAAACATTTT+AGG + chr1.1:46035855-46035874 MS.gene056855:intron 15.0%
!! AAATACATAAGAGGATTAAA+AGG - chr1.1:46035737-46035756 None:intergenic 20.0%
!! ACATAAATCCATAATTTAGA+AGG + chr1.1:46037983-46038002 MS.gene056855:intron 20.0%
!! AGATTACTTTACAAAAATCA+CGG - chr1.1:46037712-46037731 None:intergenic 20.0%
!! AGTAATCTTATAAAAAAGGA+CGG + chr1.1:46037724-46037743 MS.gene056855:intron 20.0%
!! ATCTTATGGTTTATTGTTAT+AGG + chr1.1:46035965-46035984 MS.gene056855:intron 20.0%
!! CATAAATCCATAATTTAGAA+GGG + chr1.1:46037984-46038003 MS.gene056855:intron 20.0%
!! CTAATTAATTGTACATCTTA+TGG + chr1.1:46035951-46035970 MS.gene056855:intron 20.0%
!! TAAAAACCATATTTGATTCA+TGG + chr1.1:46036086-46036105 MS.gene056855:CDS 20.0%
!! TACAATTATTATTTGGAAAC+AGG + chr1.1:46036670-46036689 MS.gene056855:CDS 20.0%
!! TAGACTATTTAACATTAAGA+TGG + chr1.1:46037300-46037319 MS.gene056855:intron 20.0%
!! TCAAAAAAATTGTTTGTGTT+TGG + chr1.1:46036034-46036053 MS.gene056855:CDS 20.0%
!! TTTATTGTTATAGGAGAAAT+GGG + chr1.1:46035974-46035993 MS.gene056855:intron 20.0%
!!! AACACAAACAATTTTTTTGA+AGG - chr1.1:46036034-46036053 None:intergenic 20.0%
!!! ATTCTTTCTATTTTACGTTT+TGG - chr1.1:46037936-46037955 None:intergenic 20.0%
!!! GCAAATATTTTATGACTTAA+AGG + chr1.1:46037591-46037610 MS.gene056855:intron 20.0%
!!! TGAATCAAATATGGTTTTTA+TGG - chr1.1:46036086-46036105 None:intergenic 20.0%
!!! TGTTTCTATTATCATATACT+TGG - chr1.1:46037959-46037978 None:intergenic 20.0%
! AACAAAGTTAGTTGAAAAGA+GGG - chr1.1:46037268-46037287 None:intergenic 25.0%
! AATTATTATTTGGAAACAGG+AGG + chr1.1:46036673-46036692 MS.gene056855:CDS 25.0%
! AATTTCATTGAATAAACGCA+GGG + chr1.1:46038069-46038088 MS.gene056855:intron 25.0%
! ACATATAACTTAAAGGATCA+TGG - chr1.1:46037140-46037159 None:intergenic 25.0%
! CTAATAGCATCATTATCAAT+TGG + chr1.1:46036210-46036229 MS.gene056855:intron 25.0%
! CTATTTAACATTAAGATGGT+AGG + chr1.1:46037304-46037323 MS.gene056855:intron 25.0%
! GAGAAGATATATTACAAGTT+AGG + chr1.1:46037843-46037862 MS.gene056855:intron 25.0%
! GATTACTTTACAAAAATCAC+GGG - chr1.1:46037711-46037730 None:intergenic 25.0%
! GTTATATACAAAGGACAATT+TGG + chr1.1:46037002-46037021 MS.gene056855:intron 25.0%
! GTTTATTGTTATAGGAGAAA+TGG + chr1.1:46035973-46035992 MS.gene056855:intron 25.0%
! GTTTGATGAAATTAGGATAA+TGG + chr1.1:46037567-46037586 MS.gene056855:intron 25.0%
! TAACAAAGTTAGTTGAAAAG+AGG - chr1.1:46037269-46037288 None:intergenic 25.0%
! TAATTTCATTGAATAAACGC+AGG + chr1.1:46038068-46038087 MS.gene056855:intron 25.0%
! TACTTTCCATGAATCAAATA+TGG - chr1.1:46036095-46036114 None:intergenic 25.0%
! TGATTGAGTTTGATGAAATT+AGG + chr1.1:46037560-46037579 MS.gene056855:intron 25.0%
! TTAGAAACCCTTCTAAATTA+TGG - chr1.1:46037994-46038013 None:intergenic 25.0%
! TTATTGTTATAGGAGAAATG+GGG + chr1.1:46035975-46035994 MS.gene056855:intron 25.0%
!! CTTGATTAAGGAATTGATTT+GGG - chr1.1:46036575-46036594 None:intergenic 25.0%
!! TTTGATGTCATAAGCATTTT+TGG - chr1.1:46037331-46037350 None:intergenic 25.0%
!!! ATTGATAATGATGCTATTAG+AGG - chr1.1:46036210-46036229 None:intergenic 25.0%
!!! TCAATCAAAAAGTGTTTATG+TGG - chr1.1:46037547-46037566 None:intergenic 25.0%
!!! TTGATAATGATGCTATTAGA+GGG - chr1.1:46036209-46036228 None:intergenic 25.0%
ATAACTTAAAGGATCATGGA+AGG - chr1.1:46037136-46037155 None:intergenic 30.0%
GCTTGATTAAGGAATTGATT+TGG - chr1.1:46036576-46036595 None:intergenic 30.0%
GTACTAAGGAAATACATAAG+AGG - chr1.1:46035746-46035765 None:intergenic 30.0%
GTGGATGTTTAATGTTAAGT+TGG - chr1.1:46037528-46037547 None:intergenic 30.0%
TCACGGGTGTATAAATATAT+TGG - chr1.1:46037695-46037714 None:intergenic 30.0%
TGATTTCAATCCCAAATACT+TGG - chr1.1:46036428-46036447 None:intergenic 30.0%
TTCCATAAATTGTGAGTGAT+TGG - chr1.1:46036451-46036470 None:intergenic 30.0%
TTCTTGAATGAGCTTGATTA+AGG - chr1.1:46036587-46036606 None:intergenic 30.0%
TTGAAGATGAATCAAATTGG+TGG - chr1.1:46038133-46038152 None:intergenic 30.0%
TTGATTCATCTTCAAAGCTT+AGG + chr1.1:46038138-46038157 MS.gene056855:CDS 30.0%
! AATGTCTAGAATTGTGAATG+TGG - chr1.1:46038334-46038353 None:intergenic 30.0%
! ATCCAGAATCAAGTTTCTTT+TGG + chr1.1:46038508-46038527 MS.gene056855:CDS 30.0%
! CTAAGCATGATTTGAAGTAT+GGG + chr1.1:46036485-46036504 MS.gene056855:CDS 30.0%
! GTACTTGAAGTATCTTCTAT+TGG + chr1.1:46036535-46036554 MS.gene056855:CDS 30.0%
! TAGACATTTTCGATAGTTTC+AGG + chr1.1:46038346-46038365 MS.gene056855:CDS 30.0%
! TCCAGAATCAAGTTTCTTTT+GGG + chr1.1:46038509-46038528 MS.gene056855:CDS 30.0%
! TTGTAACAGATTGGTTCAAT+AGG - chr1.1:46038284-46038303 None:intergenic 30.0%
!! ACAGATTTGGTGATATCTAA+AGG - chr1.1:46036622-46036641 None:intergenic 30.0%
!! ACTATTGCAACTTTGAAATG+AGG - chr1.1:46038229-46038248 None:intergenic 30.0%
!! AGTTTTGACAGCAATGAATT+TGG + chr1.1:46037497-46037516 MS.gene056855:intron 30.0%
!! ATCACTGATTCAATGAAAGA+TGG - chr1.1:46038099-46038118 None:intergenic 30.0%
!! GCTTTGAAGATGAATCAAAT+TGG - chr1.1:46038136-46038155 None:intergenic 30.0%
!! TCACTGATTCAATGAAAGAT+GGG - chr1.1:46038098-46038117 None:intergenic 30.0%
!! TTTTTGAAGGATGATTGAGA+TGG - chr1.1:46036021-46036040 None:intergenic 30.0%
AAATGACCGCAGATGATATT+TGG + chr1.1:46037669-46037688 MS.gene056855:intron 35.0%
AACAGTGAATTCACATACCA+AGG - chr1.1:46036186-46036205 None:intergenic 35.0%
AAGTTAGTTGAAAAGAGGGA+TGG - chr1.1:46037264-46037283 None:intergenic 35.0%
AGAGACATAAGCTACAGATT+TGG - chr1.1:46036635-46036654 None:intergenic 35.0%
AGGATTTGAGAGAATTGTTG+TGG + chr1.1:46038158-46038177 MS.gene056855:CDS 35.0%
ATATTGTGCAGCCAAGTATT+TGG + chr1.1:46036414-46036433 MS.gene056855:intron 35.0%
CACCAATCACTCACAATTTA+TGG + chr1.1:46036446-46036465 MS.gene056855:CDS 35.0%
CCATACTTCAAATCATGCTT+AGG - chr1.1:46036487-46036506 None:intergenic 35.0%
GAATGCTGTGTATAATGAGT+TGG + chr1.1:46038560-46038579 MS.gene056855:CDS 35.0%
GCATTACAATTAGAGACGAT+GGG - chr1.1:46036835-46036854 None:intergenic 35.0%
GGATTTGAGAGAATTGTTGT+GGG + chr1.1:46038159-46038178 MS.gene056855:CDS 35.0%
GGTTCAACTTTGTAACAGAT+TGG - chr1.1:46038293-46038312 None:intergenic 35.0%
GTAAGCAGTGAGTATAAATG+TGG + chr1.1:46038432-46038451 MS.gene056855:CDS 35.0%
TATTGGCCAAATATCATCTG+CGG - chr1.1:46037678-46037697 None:intergenic 35.0%
TATTGTGCAGCCAAGTATTT+GGG + chr1.1:46036415-46036434 MS.gene056855:intron 35.0%
TCAAACGTTCCTCAATGTTA+TGG - chr1.1:46038395-46038414 None:intergenic 35.0%
TCCCAAAAGAAACTTGATTC+TGG - chr1.1:46038513-46038532 None:intergenic 35.0%
TGTGAATGTGGTGTAATCAT+TGG - chr1.1:46038322-46038341 None:intergenic 35.0%
TTGGCTGCACAATATAAAAG+AGG - chr1.1:46036409-46036428 None:intergenic 35.0%
! ATTGGTTCAATAGGTTGTTG+TGG - chr1.1:46038275-46038294 None:intergenic 35.0%
! CCTAAGCATGATTTGAAGTA+TGG + chr1.1:46036484-46036503 MS.gene056855:CDS 35.0%
! GAGCTCATATGTGTGTTATT+TGG - chr1.1:46037476-46037495 None:intergenic 35.0%
! TATGGTTTTTATGGAGTTGC+CGG - chr1.1:46036077-46036096 None:intergenic 35.0%
!! AAAGGATCATGGAAGGTATT+TGG - chr1.1:46037129-46037148 None:intergenic 35.0%
!! GATTCATGGAAAGTACCTTA+TGG + chr1.1:46036100-46036119 MS.gene056855:CDS 35.0%
!! TGATTTGGGTTGTCACATTT+GGG - chr1.1:46036561-46036580 None:intergenic 35.0%
!! TGGTGTAATCATTGGTTTCT+TGG - chr1.1:46038314-46038333 None:intergenic 35.0%
!! TTGATTTGGGTTGTCACATT+TGG - chr1.1:46036562-46036581 None:intergenic 35.0%
!!! AGAGTTTTAACTGACTTCCT+TGG + chr1.1:46036166-46036185 MS.gene056855:CDS 35.0%
CCTCAATGTTATGGCTAGAA+GGG - chr1.1:46038386-46038405 None:intergenic 40.0%
GGAGATTCGTATGTTGATAC+CGG + chr1.1:46036055-46036074 MS.gene056855:CDS 40.0%
GGCATTACAATTAGAGACGA+TGG - chr1.1:46036836-46036855 None:intergenic 40.0%
TATGGGATGAACTTTGCCTA+CGG + chr1.1:46036502-46036521 MS.gene056855:CDS 40.0%
TCCTCAATGTTATGGCTAGA+AGG - chr1.1:46038387-46038406 None:intergenic 40.0%
TTAGTACTTGCACTTCTCTC+AGG + chr1.1:46035759-46035778 MS.gene056855:CDS 40.0%
TTGAAATGAGGTTTCAGCAG+TGG - chr1.1:46038217-46038236 None:intergenic 40.0%
TTTGAGAGAATTGTTGTGGG+AGG + chr1.1:46038162-46038181 MS.gene056855:CDS 40.0%
! TGAGAGAAGTGCAAGTACTA+AGG - chr1.1:46035760-46035779 None:intergenic 40.0%
CCCTTCTAGCCATAACATTG+AGG + chr1.1:46038383-46038402 MS.gene056855:CDS 45.0%
GTAGCTTATGTCTCTGTTGC+TGG + chr1.1:46036640-46036659 MS.gene056855:CDS 45.0%
GTCAGTTAAAACTCTGCCGT+CGG - chr1.1:46036161-46036180 None:intergenic 45.0%
!!! AATCTCCCAACTGGTTTTCC+GGG - chr1.1:46036136-46036155 None:intergenic 45.0%
!!! GAATCTCCCAACTGGTTTTC+CGG - chr1.1:46036137-46036156 None:intergenic 45.0%
!! ATTCATAAATATATAAAATA+TGG - chr1.1:46038034-46038053 None:intergenic 5.0%
!! TTCATAAATATATAAAATAT+GGG - chr1.1:46038033-46038052 None:intergenic 5.0%
!!! AAAAAAAAAACATTTTTTTA+AGG + chr1.1:46036324-46036343 MS.gene056855:intron 5.0%
AACTTTGCCTACGGTGGTAC+AGG + chr1.1:46036511-46036530 MS.gene056855:CDS 50.0%
AAGTACACCTGTACCACCGT+AGG - chr1.1:46036521-46036540 None:intergenic 50.0%
ACCTTTCCCGGAAAACCAGT+TGG + chr1.1:46036127-46036146 MS.gene056855:CDS 50.0%
AGAAATGGGGCTGCAAGTTG+AGG + chr1.1:46035988-46036007 MS.gene056855:CDS 50.0%
AGGATGATTGAGATGGCGAG+TGG - chr1.1:46036014-46036033 None:intergenic 50.0%
CATTCCAACCAGCCTGTGTT+GGG - chr1.1:46038545-46038564 None:intergenic 50.0%
CCTTATGGCATGACCTTTCC+CGG + chr1.1:46036115-46036134 MS.gene056855:CDS 50.0%
CCTTTCCCGGAAAACCAGTT+GGG + chr1.1:46036128-46036147 MS.gene056855:CDS 50.0%
CTGCTTACTCCAACGCAACA+TGG - chr1.1:46038420-46038439 None:intergenic 50.0%
GCTTGAGGAAGACAACCAAG+GGG - chr1.1:46038195-46038214 None:intergenic 50.0%
GGCTTGAGGAAGACAACCAA+GGG - chr1.1:46038196-46038215 None:intergenic 50.0%
GGTTGTTGTGGAGAGCTACA+AGG - chr1.1:46038263-46038282 None:intergenic 50.0%
TGGCTTGAGGAAGACAACCA+AGG - chr1.1:46038197-46038216 None:intergenic 50.0%
! CGTTTGAAGCCATGTTGCGT+TGG + chr1.1:46038408-46038427 MS.gene056855:CDS 50.0%
CCAGTTGGGAGATTCTCCGA+CGG + chr1.1:46036142-46036161 MS.gene056855:CDS 55.0%
CCGGGAAAGGTCATGCCATA+AGG - chr1.1:46036118-46036137 None:intergenic 55.0%
GAGGTTTCAGCAGTGGCTTG+AGG - chr1.1:46038210-46038229 None:intergenic 55.0%
GCATTCCAACCAGCCTGTGT+TGG - chr1.1:46038546-46038565 None:intergenic 55.0%
GGATCAGTTGCACCCAACAC+AGG + chr1.1:46038530-46038549 MS.gene056855:CDS 55.0%
GGGATGAACTTTGCCTACGG+TGG + chr1.1:46036505-46036524 MS.gene056855:CDS 55.0%
GTGGGAGGTTTACAACCCCT+TGG + chr1.1:46038177-46038196 MS.gene056855:CDS 55.0%
!!! CCCAACTGGTTTTCCGGGAA+AGG - chr1.1:46036131-46036150 None:intergenic 55.0%
CAGTTGCACCCAACACAGGC+TGG + chr1.1:46038534-46038553 MS.gene056855:CDS 60.0%
CCGTCGGAGAATCTCCCAAC+TGG - chr1.1:46036145-46036164 None:intergenic 60.0%
TGCACCCAACACAGGCTGGT+TGG + chr1.1:46038538-46038557 MS.gene056855:CDS 60.0%
!! GGAAACAGGAGGCGCTGTGT+CGG + chr1.1:46036684-46036703 MS.gene056855:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 46035717 46038614 46035717 ID=MS.gene056855
chr1.1 mRNA 46035717 46038614 46035717 ID=MS.gene056855.t1;Parent=MS.gene056855
chr1.1 exon 46035717 46035780 46035717 ID=MS.gene056855.t1.exon1;Parent=MS.gene056855.t1
chr1.1 CDS 46035717 46035780 46035717 ID=cds.MS.gene056855.t1;Parent=MS.gene056855.t1
chr1.1 exon 46035987 46036187 46035987 ID=MS.gene056855.t1.exon2;Parent=MS.gene056855.t1
chr1.1 CDS 46035987 46036187 46035987 ID=cds.MS.gene056855.t1;Parent=MS.gene056855.t1
chr1.1 exon 46036425 46036705 46036425 ID=MS.gene056855.t1.exon3;Parent=MS.gene056855.t1
chr1.1 CDS 46036425 46036705 46036425 ID=cds.MS.gene056855.t1;Parent=MS.gene056855.t1
chr1.1 exon 46038090 46038614 46038090 ID=MS.gene056855.t1.exon4;Parent=MS.gene056855.t1
chr1.1 CDS 46038090 46038614 46038090 ID=cds.MS.gene056855.t1;Parent=MS.gene056855.t1
Gene Sequence

>MS.gene056855

ATGGACTCACAAAAGCACCTTTTAATCCTCTTATGTATTTCCTTAGTACTTGCACTTCTCTCAGGTATATATTACTATGAATTTATTCAATTTTTTTGGAAAATACGTATATGAATTTATGATCATAAAATTTTAATACAATTTTTCATAAACATTTTAGGATTTCATGTTAATAGTGTATTCACTTGTTTTAACGATGACTATTAATAATCAATATATATTCAACTTTCTAAACTAATTAATTGTACATCTTATGGTTTATTGTTATAGGAGAAATGGGGCTGCAAGTTGAGGCCACTCGCCATCTCAATCATCCTTCAAAAAAATTGTTTGTGTTTGGAGATTCGTATGTTGATACCGGCAACTCCATAAAAACCATATTTGATTCATGGAAAGTACCTTATGGCATGACCTTTCCCGGAAAACCAGTTGGGAGATTCTCCGACGGCAGAGTTTTAACTGACTTCCTTGGTATGTGAATTCACTGTTCCCTCTAATAGCATCATTATCAATTGGAACAATGCATTGTTTTTTAAATTTTTTGAATGGGAGTAACTTATTTTTTTTAAGAAAATTTCGTATTGAAAAAACATGTACTAAATTTTAAAAAAAAAAAACATTTTTTTAAGGATATAATGCATATTTTAGTCTTTCTTTATTAGTGTTTGCTTTCTCTTTTAATTATGCTTCCTCTTTTATATTGTGCAGCCAAGTATTTGGGATTGAAATCACCAATCACTCACAATTTATGGAATACTAATACAGTGCCTAAGCATGATTTGAAGTATGGGATGAACTTTGCCTACGGTGGTACAGGTGTACTTGAAGTATCTTCTATTGGCCCAAATGTGACAACCCAAATCAATTCCTTAATCAAGCTCATTCAAGAAAATGTCTACACTCCTTTAGATATCACCAAATCTGTAGCTTATGTCTCTGTTGCTGGAAATGACTACAATTATTATTTGGAAACAGGAGGCGCTGTGTCGGTAAATTATTTAAATTTAATCATCATATTTTCTATATTTCTTGGATGTAAAGTATGAAATTCAATAATTAAAAAGTGATGATGATGATAATAACAACAACAACAATAATAATAATTAAAATAGACTCCCATCGTCTCTAATTGTAATGCCATTTACAAAAACAAAAAAAAAAATTGTCTCTAAATATAAGACATCTACAAATTTTTAGATGTATTTATTACTCTTTATTCAAGTATAACCCTTAATAATATATTATCAATGTATCTTGCAATATAAAAAGTTAACAAATAAATATAGTTATATACAAAGGACAATTTGGTAATAGTTACATATATTTATTTTTTGACAAAAGTTACATATATTTACGACAAGTTTATTACTTCAACAAATTTATTAAAAGTTAACACTAAATATATTTGGCCAAATACCTTCCATGATCCTTTAAGTTATATGTTTATAACAAATTAATCCTTTAAGTTTCTTTTTTTATCAATTGATCCTTTAAGTTATTTTTTGTTTCAAATTGGTCTTTTAAGTCGTATAATATTTACATTGCCATCCCTCTTTTCAACTAACTTTGTTAAAAAGTGCTTATAGACTATTTAACATTAAGATGGTAGGTCCAAAAATGCTTATGACATCAAACATGATTACTTATACACATTTTCTTCTTCTTGTTTTTGAATTTCAAAACTAATTTTACTTATAAATATTTGATCAACAATATTATAAATCAAGTAATTGGTCAATTTTGTTTTGAATCAAGACCAAATAACACACATATGAGCTCTAGTTTTGACAGCAATGAATTTGGACAAACCAACTTAACATTAAACATCCACATAAACACTTTTTGATTGAGTTTGATGAAATTAGGATAATGGTGCAAATATTTTATGACTTAAAGGACCAATTTGTAACTAAAAAAACTTAAAGGACTAACTTGTTATAATCATGTAACTTAAATGACCGCAGATGATATTTGGCCAATATATTTATACACCCGTGATTTTTGTAAAGTAATCTTATAAAAAAGGACGGAGAGAGCAAATAATTTTTCAATTATTATTGCATAAAATTAGCACAGTATTTCAAAGTTATAAAGATAAAGCACTCATATGTAACAATTGTGATAGAGAGAAGATATATTACAAGTTAGGAAAAATGTATTTTTGAAAATTTAAAAAAAAAATTGCATTTTCAAAATTGTAGATCTAAAGATGAAAACCAAAACGTAAAATAGAAAGAATCCAAGTATATGATAATAGAAACAAAAAACATAAATCCATAATTTAGAAGGGTTTCTAAAAAAAATAAAATTGCACCCATATTTTATATATTTATGAATGAATGTTAACAAAATAATTTCATTGAATAAACGCAGGGTTTCCCATCTTTCATTGAATCAGTGATTGAACAAACAACCACCAATTTGATTCATCTTCAAAGCTTAGGATTTGAGAGAATTGTTGTGGGAGGTTTACAACCCCTTGGTTGTCTTCCTCAAGCCACTGCTGAAACCTCATTTCAAAGTTGCAATAGTACATTTAATGACCTTGTAGCTCTCCACAACAACCTATTGAACCAATCTGTTACAAAGTTGAACCAAGAAACCAATGATTACACCACATTCACAATTCTAGACATTTTCGATAGTTTCAGGTCAGTGTTGAATCACCCTTCTAGCCATAACATTGAGGAACGTTTGAAGCCATGTTGCGTTGGAGTAAGCAGTGAGTATAAATGTGGAAGTGTAGATTATAGAAATTTAAACAAGGTAAAGAAATATTTGATTTGTGAAAATCCAGAATCAAGTTTCTTTTGGGATCAGTTGCACCCAACACAGGCTGGTTGGAATGCTGTGTATAATGAGTTGGAGAAGAAAGATCTTTATCAAATTTTGTATTAG
Protein sequence

>MS.gene056855.t1

MDSQKHLLILLCISLVLALLSGEMGLQVEATRHLNHPSKKLFVFGDSYVDTGNSIKTIFDSWKVPYGMTFPGKPVGRFSDGRVLTDFLAKYLGLKSPITHNLWNTNTVPKHDLKYGMNFAYGGTGVLEVSSIGPNVTTQINSLIKLIQENVYTPLDITKSVAYVSVAGNDYNYYLETGGAVSGFPSFIESVIEQTTTNLIHLQSLGFERIVVGGLQPLGCLPQATAETSFQSCNSTFNDLVALHNNLLNQSVTKLNQETNDYTTFTILDIFDSFRSVLNHPSSHNIEERLKPCCVGVSSEYKCGSVDYRNLNKVKKYLICENPESSFFWDQLHPTQAGWNAVYNELEKKDLYQILY