AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056943


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056943.t1 MTR_0565s0010 99.178 365 3 0 1 365 1 365 0.0 735
MS.gene056943.t1 MTR_3g024510 79.722 360 70 3 8 365 12 370 0.0 590
MS.gene056943.t1 MTR_8g087890 71.507 365 102 2 1 365 1 363 0.0 541
MS.gene056943.t1 MTR_3g005660 56.305 341 144 4 28 365 32 370 2.80e-130 378
MS.gene056943.t1 MTR_3g005650 52.408 353 162 5 13 365 11 357 1.68e-125 365
MS.gene056943.t1 MTR_3g098270 45.205 365 183 7 14 364 7 368 6.48e-109 324
MS.gene056943.t1 MTR_8g087870 46.356 343 161 5 29 365 26 351 1.87e-105 314
MS.gene056943.t1 MTR_3g023220 45.266 338 172 4 27 364 28 352 1.94e-104 311
MS.gene056943.t1 MTR_4g035353 45.098 357 189 6 13 365 10 363 5.03e-104 311
MS.gene056943.t1 MTR_2g017955 46.450 338 171 5 29 364 30 359 1.59e-102 307
MS.gene056943.t1 MTR_2g017925 44.382 356 182 6 13 364 11 354 6.15e-102 305
MS.gene056943.t1 MTR_2g017875 45.930 344 174 6 25 365 27 361 1.34e-101 304
MS.gene056943.t1 MTR_2g017965 43.820 356 186 8 15 364 13 360 8.70e-96 290
MS.gene056943.t1 MTR_2g017915 41.918 365 176 7 7 364 3 338 3.74e-92 280
MS.gene056943.t1 MTR_2g033920 40.960 354 201 7 15 364 18 367 2.47e-87 268
MS.gene056943.t1 MTR_2g033930 38.920 352 209 6 15 364 15 362 7.38e-83 256
MS.gene056943.t1 MTR_4g122200 37.465 355 214 7 14 364 17 367 1.29e-82 256
MS.gene056943.t1 MTR_5g078210 38.728 346 199 11 9 348 1 339 2.18e-78 244
MS.gene056943.t1 MTR_1g079540 38.953 344 204 5 7 346 4 345 7.55e-76 239
MS.gene056943.t1 MTR_5g009100 37.838 333 201 5 34 363 48 377 2.03e-75 238
MS.gene056943.t1 MTR_7g116570 37.135 342 204 6 8 344 11 346 1.28e-72 230
MS.gene056943.t1 MTR_7g116500 39.104 335 193 7 33 362 34 362 5.44e-72 229
MS.gene056943.t1 MTR_1g069175 38.889 342 203 5 13 350 14 353 2.11e-70 225
MS.gene056943.t1 MTR_1g024890 35.613 351 219 6 14 360 12 359 2.59e-70 224
MS.gene056943.t1 MTR_7g116510 35.734 361 225 7 9 365 1 358 4.99e-70 223
MS.gene056943.t1 MTR_3g052490 38.286 350 197 9 23 362 23 363 1.45e-69 222
MS.gene056943.t1 MTR_8g079050 36.517 356 214 7 1 344 1 356 1.17e-68 220
MS.gene056943.t1 MTR_3g052480 37.234 376 212 10 5 365 2 368 1.40e-68 220
MS.gene056943.t1 MTR_7g116520 36.441 354 216 7 13 362 15 363 1.45e-68 220
MS.gene056943.t1 MTR_2g018015 39.645 338 132 7 29 364 33 300 3.63e-68 217
MS.gene056943.t1 MTR_5g093090 37.396 361 206 11 13 362 8 359 5.82e-68 218
MS.gene056943.t1 MTR_1g025780 35.806 310 189 6 30 335 39 342 9.31e-67 215
MS.gene056943.t1 MTR_1g079530 36.212 359 208 8 14 365 11 355 1.33e-66 214
MS.gene056943.t1 MTR_4g019880 37.389 337 196 8 14 341 13 343 4.09e-66 214
MS.gene056943.t1 MTR_4g108690 35.783 313 193 6 34 342 29 337 8.11e-66 213
MS.gene056943.t1 MTR_3g435540 35.821 335 202 9 13 342 7 333 1.38e-65 212
MS.gene056943.t1 MTR_5g084790 35.447 347 216 6 1 343 1 343 1.73e-65 211
MS.gene056943.t1 MTR_3g082830 37.188 320 193 6 27 342 33 348 2.20e-65 211
MS.gene056943.t1 MTR_6g021530 36.522 345 205 7 14 346 8 350 2.84e-65 211
MS.gene056943.t1 MTR_1g025760 34.375 352 209 8 1 336 39 384 1.64e-64 210
MS.gene056943.t1 MTR_2g084585 35.088 342 212 7 6 342 4 340 3.13e-64 208
MS.gene056943.t1 MTR_2g033920 41.281 281 159 5 15 292 18 295 4.00e-64 207
MS.gene056943.t1 MTR_8g074570 37.791 344 186 10 13 340 17 348 9.47e-64 207
MS.gene056943.t1 MTR_4g056160 35.694 353 203 10 16 357 11 350 9.64e-64 207
MS.gene056943.t1 MTR_1g025700 36.452 310 190 5 30 336 48 353 1.48e-63 207
MS.gene056943.t1 MTR_1g025720 35.806 310 190 6 31 336 36 340 5.72e-63 205
MS.gene056943.t1 MTR_3g052580 35.068 365 211 11 13 365 11 361 1.11e-62 205
MS.gene056943.t1 MTR_5g084750 36.909 317 190 7 29 340 27 338 1.33e-62 204
MS.gene056943.t1 MTR_3g052580 35.068 365 211 11 13 365 10 360 1.87e-62 205
MS.gene056943.t1 MTR_3g114120 34.516 310 196 5 30 336 45 350 6.53e-62 202
MS.gene056943.t1 MTR_2g100620 36.364 319 192 7 30 342 29 342 1.85e-61 201
MS.gene056943.t1 MTR_8g014910 35.345 348 207 10 8 342 1 343 2.09e-61 201
MS.gene056943.t1 MTR_7g008060 33.934 333 202 5 13 341 11 329 4.08e-61 200
MS.gene056943.t1 MTR_5g084770 36.443 343 204 9 8 341 1 338 5.24e-61 200
MS.gene056943.t1 MTR_4g056280 36.392 316 193 6 30 341 28 339 6.82e-61 200
MS.gene056943.t1 MTR_3g464730 33.724 341 219 6 6 342 2 339 7.58e-60 197
MS.gene056943.t1 MTR_3g114090 34.839 310 194 6 31 336 35 340 8.67e-60 197
MS.gene056943.t1 MTR_1g025680 34.821 336 204 8 11 336 8 338 9.69e-60 199
MS.gene056943.t1 MTR_8g075230 34.356 326 206 6 28 349 32 353 1.95e-58 193
MS.gene056943.t1 MTR_5g078210 37.107 318 187 11 9 319 1 312 9.39e-57 188
MS.gene056943.t1 MTR_3g021460 32.698 367 220 10 2 364 6 349 2.52e-56 187
MS.gene056943.t1 MTR_5g022640 32.915 319 205 6 28 341 39 353 4.40e-56 187
MS.gene056943.t1 MTR_2g461580 32.222 360 222 8 9 364 8 349 7.30e-56 186
MS.gene056943.t1 MTR_0009s0250 33.528 343 201 12 13 346 12 336 9.28e-56 186
MS.gene056943.t1 MTR_5g022630 30.966 352 231 9 6 349 15 362 1.91e-55 186
MS.gene056943.t1 MTR_2g015080 30.636 346 221 9 7 337 11 352 2.14e-54 183
MS.gene056943.t1 MTR_5g074270 34.177 316 198 7 34 343 35 346 2.80e-53 180
MS.gene056943.t1 MTR_2g017925 39.004 241 134 5 125 364 23 251 3.69e-53 177
MS.gene056943.t1 MTR_8g075200 31.464 321 212 6 28 344 37 353 7.18e-53 180
MS.gene056943.t1 MTR_2g017895 35.417 288 158 6 80 365 6 267 9.23e-53 176
MS.gene056943.t1 MTR_8g075220 30.395 329 220 6 28 349 36 362 2.20e-52 178
MS.gene056943.t1 MTR_5g093090 37.801 291 162 10 13 292 8 290 4.72e-47 162
MS.gene056943.t1 MTR_4g087985 31.746 315 200 8 34 337 38 348 2.00e-46 162
MS.gene056943.t1 MTR_5g083040 31.498 327 201 8 29 341 29 346 2.55e-46 162
MS.gene056943.t1 MTR_2g044100 34.118 340 203 12 34 362 45 374 3.47e-46 162
MS.gene056943.t1 MTR_1g025910 32.915 319 196 6 37 351 41 345 1.18e-44 158
MS.gene056943.t1 MTR_8g074580 31.965 341 216 7 28 360 40 372 1.49e-44 159
MS.gene056943.t1 MTR_8g022790 30.189 371 232 12 6 365 7 361 3.17e-44 156
MS.gene056943.t1 MTR_8g022810 29.582 311 206 6 34 337 43 347 2.69e-43 154
MS.gene056943.t1 MTR_8g031390 29.032 372 226 11 6 355 1 356 2.81e-43 154
MS.gene056943.t1 MTR_0127s0040 31.818 242 160 4 125 365 1 238 1.48e-42 148
MS.gene056943.t1 MTR_8g074560 29.477 363 238 10 13 364 12 367 2.33e-42 151
MS.gene056943.t1 MTR_8g031420 28.977 352 227 9 16 357 19 357 5.52e-42 150
MS.gene056943.t1 MTR_8g031400 30.030 333 211 8 24 347 29 348 8.31e-42 150
MS.gene056943.t1 MTR_5g087690 30.029 343 211 8 34 364 52 377 2.14e-40 146
MS.gene056943.t1 MTR_8g031430 29.341 334 214 8 24 348 29 349 1.85e-39 144
MS.gene056943.t1 MTR_8g031390 29.721 323 195 9 6 312 1 307 7.61e-38 138
MS.gene056943.t1 MTR_3g011860 64.835 91 32 0 232 322 232 322 4.74e-36 134
MS.gene056943.t1 MTR_1g079590 35.859 198 124 3 13 208 12 208 5.27e-35 128
MS.gene056943.t1 MTR_7g087190 27.577 359 223 9 29 359 40 389 2.99e-34 130
MS.gene056943.t1 MTR_7g033155 25.063 399 241 10 7 357 6 394 3.10e-32 125
MS.gene056943.t1 MTR_5g093090 40.291 206 107 9 13 207 8 208 5.90e-32 120
MS.gene056943.t1 MTR_1g030340 27.838 370 219 10 4 341 14 367 7.94e-32 124
MS.gene056943.t1 MTR_8g089805 28.488 344 210 10 31 347 39 373 1.75e-30 120
MS.gene056943.t1 MTR_1g030268 27.487 382 235 12 8 361 13 380 2.92e-30 119
MS.gene056943.t1 MTR_7g033150 24.409 381 241 10 14 357 10 380 1.90e-29 117
MS.gene056943.t1 MTR_8g028160 25.967 362 223 10 34 365 38 384 2.08e-29 117
MS.gene056943.t1 MTR_7g116870 25.521 384 230 12 9 356 7 370 4.92e-29 116
MS.gene056943.t1 MTR_1g030275 27.247 356 224 10 11 341 16 361 5.68e-29 115
MS.gene056943.t1 MTR_1g030230 27.415 383 239 12 6 361 4 374 6.07e-29 115
MS.gene056943.t1 MTR_7g111780 26.012 346 229 8 25 357 29 360 1.76e-28 114
MS.gene056943.t1 MTR_1g030220 26.700 397 238 13 1 360 1 381 3.06e-28 114
MS.gene056943.t1 MTR_8g038680 28.779 344 200 9 31 344 27 355 3.54e-28 113
MS.gene056943.t1 MTR_8g022810 26.452 310 162 8 34 336 43 293 1.20e-27 111
MS.gene056943.t1 MTR_2g087292 27.941 340 155 12 13 346 12 267 2.06e-27 109
MS.gene056943.t1 MTR_1108s0010 30.952 210 130 4 133 341 3 198 4.07e-27 107
MS.gene056943.t1 MTR_6g007100 28.116 345 211 11 31 357 32 357 4.75e-27 110
MS.gene056943.t1 MTR_6g007090 28.488 344 200 10 29 344 36 361 5.97e-27 110
MS.gene056943.t1 MTR_6g007095 27.476 313 199 8 59 357 394 692 1.37e-26 111
MS.gene056943.t1 MTR_6g007095 27.809 356 209 12 31 357 40 376 2.97e-23 101
MS.gene056943.t1 MTR_1g060500 25.816 337 216 10 34 357 42 357 2.10e-26 108
MS.gene056943.t1 MTR_5g074210 37.226 137 85 1 208 343 66 202 8.16e-26 103
MS.gene056943.t1 MTR_4g036375 40.132 152 86 4 30 178 28 177 2.14e-25 102
MS.gene056943.t1 MTR_1g060490 27.445 317 192 12 34 337 39 330 4.61e-25 104
MS.gene056943.t1 MTR_7g033165 26.629 353 223 10 31 357 32 374 4.67e-25 105
MS.gene056943.t1 MTR_2g015630 27.576 330 205 12 37 342 36 355 1.77e-24 103
MS.gene056943.t1 MTR_3g463960 24.706 340 209 11 34 343 46 368 5.47e-24 102
MS.gene056943.t1 MTR_3g463950 24.706 340 209 11 34 343 46 368 5.47e-24 102
MS.gene056943.t1 MTR_3g463970 24.706 340 209 11 34 343 46 368 5.47e-24 102
MS.gene056943.t1 MTR_3g463940 24.706 340 209 11 34 343 46 368 5.47e-24 102
MS.gene056943.t1 MTR_7g113860 25.000 368 224 11 26 357 23 374 1.23e-23 100
MS.gene056943.t1 MTR_3g463930 24.706 340 216 11 34 343 46 375 1.55e-23 100
MS.gene056943.t1 MTR_7g113860 25.193 389 233 13 10 357 9 380 3.43e-23 99.8
MS.gene056943.t1 MTR_7g104220 26.562 320 192 11 34 337 44 336 1.45e-22 97.8
MS.gene056943.t1 MTR_6g049220 52.809 89 39 2 30 115 28 116 4.05e-22 92.4
MS.gene056943.t1 MTR_7g111780 28.431 204 133 4 162 357 63 261 1.43e-21 93.2
MS.gene056943.t1 MTR_8g089805 26.761 284 176 8 91 347 27 305 1.71e-21 94.4
MS.gene056943.t1 MTR_1g082390 24.457 368 231 10 8 344 7 358 2.46e-21 94.4
MS.gene056943.t1 MTR_1g030268 28.053 303 188 9 8 292 13 303 4.03e-21 93.2
MS.gene056943.t1 MTR_2g043980 25.770 357 221 14 9 343 7 341 4.62e-21 93.6
MS.gene056943.t1 MTR_4g104240 23.955 359 239 10 6 341 8 355 6.66e-21 93.2
MS.gene056943.t1 MTR_1g030265 26.087 299 182 8 91 361 60 347 1.03e-20 92.4
MS.gene056943.t1 MTR_8g012540 28.618 304 180 9 31 312 27 315 1.82e-20 91.7
MS.gene056943.t1 MTR_1g092740 25.223 337 190 12 34 345 40 339 2.68e-20 91.3
MS.gene056943.t1 MTR_2g015590 25.904 332 212 10 32 338 28 350 4.12e-19 88.2
MS.gene056943.t1 MTR_1g092690 26.168 321 190 11 34 337 53 343 6.63e-19 87.4
MS.gene056943.t1 MTR_2g015580 25.378 331 215 11 34 342 49 369 8.69e-19 87.4
MS.gene056943.t1 MTR_3g069780 23.724 333 218 14 34 343 32 351 1.57e-18 86.3
MS.gene056943.t1 MTR_3g438030 23.724 333 218 14 34 343 32 351 3.14e-18 85.5
MS.gene056943.t1 MTR_1g092750 25.545 321 194 13 34 337 42 334 4.16e-18 84.7
MS.gene056943.t1 MTR_2g015650 26.849 365 226 15 9 343 1 354 8.14e-18 84.3
MS.gene056943.t1 MTR_1g079570 27.737 137 97 2 226 362 4 138 6.51e-17 77.4
MS.gene056943.t1 MTR_7g113860 24.092 303 183 9 88 357 18 306 1.65e-16 79.7
MS.gene056943.t1 MTR_2g015670 26.946 334 194 13 34 343 33 340 3.45e-15 76.3
MS.gene056943.t1 MTR_2g087190 49.367 79 15 1 237 315 93 146 3.99e-15 73.2
MS.gene056943.t1 MTR_5g084880 35.849 106 68 0 187 292 7 112 6.54e-15 71.6
MS.gene056943.t1 MTR_1g092760 26.087 322 190 12 34 337 41 332 8.32e-15 75.1
MS.gene056943.t1 MTR_8g062580 33.051 118 72 3 227 343 67 178 1.85e-14 72.8
MS.gene056943.t1 MTR_4g056220 34.259 108 68 2 235 341 71 176 2.16e-14 71.6
MS.gene056943.t1 MTR_3g448360 22.455 334 222 12 34 343 31 351 2.79e-14 73.6
MS.gene056943.t1 MTR_3g069520 23.881 335 213 13 34 343 32 349 2.28e-13 70.9
MS.gene056943.t1 MTR_4g036385 30.476 105 72 1 241 344 22 126 1.51e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056943.t1 AT1G29670 74.790 357 82 4 14 365 78 431 0.0 544
MS.gene056943.t1 AT1G29670 74.790 357 82 4 14 365 10 363 0.0 541
MS.gene056943.t1 AT5G45670 67.397 365 116 1 1 365 1 362 2.97e-180 504
MS.gene056943.t1 AT1G29660 65.915 355 120 1 11 365 11 364 4.51e-177 496
MS.gene056943.t1 AT4G18970 70.149 335 100 0 31 365 27 361 2.79e-174 489
MS.gene056943.t1 AT4G18970 70.149 335 100 0 31 365 27 361 6.62e-173 488
MS.gene056943.t1 AT1G33811 54.519 343 147 5 29 365 31 370 1.05e-125 366
MS.gene056943.t1 AT1G71691 47.564 349 175 6 17 365 43 383 1.06e-113 336
MS.gene056943.t1 AT5G08460 46.053 380 185 7 3 365 9 385 5.38e-112 332
MS.gene056943.t1 AT5G15720 46.045 354 180 7 20 365 14 364 6.51e-107 318
MS.gene056943.t1 AT1G71250 45.777 367 186 6 9 365 10 373 3.86e-106 317
MS.gene056943.t1 AT2G19010 43.220 354 182 6 13 364 11 347 9.35e-101 302
MS.gene056943.t1 AT2G19010 43.220 354 182 6 13 364 41 377 3.33e-100 301
MS.gene056943.t1 AT2G19050 43.440 343 173 6 26 365 25 349 3.58e-96 290
MS.gene056943.t1 AT2G19060 43.827 324 162 6 28 346 26 334 2.99e-93 283
MS.gene056943.t1 AT4G30140 47.493 339 153 8 28 362 29 346 1.05e-89 273
MS.gene056943.t1 AT1G71691 44.161 274 149 4 92 365 13 282 6.49e-84 256
MS.gene056943.t1 AT1G71691 47.464 276 138 5 17 292 43 311 9.63e-83 254
MS.gene056943.t1 AT2G19050 47.826 253 124 2 26 278 25 269 1.02e-82 253
MS.gene056943.t1 AT5G15720 43.750 288 156 5 82 365 48 333 2.25e-81 252
MS.gene056943.t1 AT5G15720 45.552 281 143 6 20 292 14 292 3.67e-77 240
MS.gene056943.t1 AT4G10950 37.278 338 206 5 30 364 69 403 2.14e-75 239
MS.gene056943.t1 AT2G23540 40.252 318 183 5 34 344 50 367 2.79e-74 235
MS.gene056943.t1 AT4G10950 36.391 338 205 5 30 364 69 399 8.99e-72 229
MS.gene056943.t1 AT5G33370 36.119 335 209 5 33 365 31 362 5.57e-71 226
MS.gene056943.t1 AT3G50400 38.298 329 193 7 25 344 27 354 1.12e-70 226
MS.gene056943.t1 AT5G37690 34.593 344 217 7 6 346 1 339 1.93e-70 224
MS.gene056943.t1 AT3G04290 39.683 315 178 7 33 341 30 338 4.16e-68 219
MS.gene056943.t1 AT4G28780 38.217 314 184 6 33 341 32 340 4.07e-67 216
MS.gene056943.t1 AT1G74460 37.061 313 189 7 34 342 25 333 7.14e-67 216
MS.gene056943.t1 AT2G42990 35.277 343 213 7 9 347 6 343 2.29e-65 211
MS.gene056943.t1 AT5G18430 37.464 347 201 7 9 344 1 342 2.29e-65 211
MS.gene056943.t1 AT5G55050 38.438 333 188 9 20 341 27 353 2.57e-65 212
MS.gene056943.t1 AT3G53100 37.725 334 198 7 14 342 11 339 5.62e-65 210
MS.gene056943.t1 AT5G37690 33.721 344 212 8 6 346 1 331 6.47e-65 210
MS.gene056943.t1 AT1G75880 36.991 319 188 8 30 341 50 362 4.34e-63 206
MS.gene056943.t1 AT1G75880 37.304 319 186 9 30 341 50 361 6.21e-63 206
MS.gene056943.t1 AT2G04570 34.218 339 215 6 14 348 10 344 1.10e-62 204
MS.gene056943.t1 AT5G22810 35.938 320 194 7 30 342 32 347 3.76e-62 203
MS.gene056943.t1 AT5G42170 34.385 317 195 7 30 341 48 356 5.18e-62 203
MS.gene056943.t1 AT3G14820 33.129 326 200 9 26 344 26 340 8.35e-62 202
MS.gene056943.t1 AT1G75890 34.954 329 197 10 28 347 43 363 1.53e-61 202
MS.gene056943.t1 AT1G75890 34.954 329 197 10 28 347 72 392 2.33e-61 202
MS.gene056943.t1 AT5G41890 35.150 367 211 9 18 365 17 375 5.09e-61 201
MS.gene056943.t1 AT1G75890 33.724 341 198 10 28 347 43 376 1.93e-59 197
MS.gene056943.t1 AT5G03820 34.384 349 215 9 1 342 4 345 4.48e-59 195
MS.gene056943.t1 AT5G03810 34.535 333 208 8 16 342 13 341 4.63e-59 195
MS.gene056943.t1 AT5G03820 34.384 349 215 9 1 342 32 373 8.15e-59 195
MS.gene056943.t1 AT3G16370 34.154 325 203 8 24 342 22 341 7.26e-58 192
MS.gene056943.t1 AT4G26790 33.648 318 203 6 29 342 26 339 1.67e-57 191
MS.gene056943.t1 AT4G26790 33.648 318 203 6 29 342 26 339 1.67e-57 191
MS.gene056943.t1 AT1G75900 32.595 316 204 6 30 341 41 351 2.02e-57 191
MS.gene056943.t1 AT1G59406 33.846 325 196 9 25 341 23 336 4.90e-57 189
MS.gene056943.t1 AT1G59030 33.846 325 196 9 25 341 23 336 4.90e-57 189
MS.gene056943.t1 AT1G58725 33.846 325 196 9 25 341 23 336 4.90e-57 189
MS.gene056943.t1 AT4G16230 40.000 240 138 5 13 248 10 247 4.20e-56 184
MS.gene056943.t1 AT2G31540 35.016 317 198 7 31 342 34 347 6.11e-56 187
MS.gene056943.t1 AT2G24560 34.591 318 198 8 31 342 33 346 1.46e-55 186
MS.gene056943.t1 AT1G20132 34.603 315 192 7 28 335 57 364 9.91e-55 184
MS.gene056943.t1 AT1G20135 32.024 331 205 8 10 335 5 320 5.91e-54 181
MS.gene056943.t1 AT2G30310 33.956 321 196 9 31 342 33 346 1.54e-52 178
MS.gene056943.t1 AT5G63170 33.742 326 196 7 14 335 10 319 1.75e-52 177
MS.gene056943.t1 AT2G30220 33.232 328 189 9 31 342 32 345 2.67e-52 177
MS.gene056943.t1 AT5G33370 37.262 263 161 4 32 292 30 290 2.72e-52 177
MS.gene056943.t1 AT1G20120 31.761 318 209 6 31 344 77 390 3.19e-52 178
MS.gene056943.t1 AT2G03980 33.739 329 198 9 31 350 42 359 3.37e-52 177
MS.gene056943.t1 AT2G03980 33.739 329 198 9 31 350 42 359 3.37e-52 177
MS.gene056943.t1 AT2G03980 33.739 329 198 9 31 350 42 359 3.37e-52 177
MS.gene056943.t1 AT2G03980 33.739 329 198 9 31 350 42 359 3.37e-52 177
MS.gene056943.t1 AT1G58520 32.308 325 194 10 25 341 23 329 7.97e-52 176
MS.gene056943.t1 AT1G58525 32.308 325 194 10 25 341 23 329 7.97e-52 176
MS.gene056943.t1 AT1G58430 33.019 318 203 8 31 342 34 347 9.25e-51 173
MS.gene056943.t1 AT1G73610 33.739 329 191 8 24 342 21 332 1.20e-49 170
MS.gene056943.t1 AT1G06990 32.390 318 204 7 31 342 36 348 3.20e-49 169
MS.gene056943.t1 AT1G23500 32.768 354 209 9 1 344 1 335 6.81e-49 168
MS.gene056943.t1 AT1G20130 31.611 329 206 8 28 343 180 502 3.21e-48 170
MS.gene056943.t1 AT1G20130 31.611 329 206 8 28 343 200 522 5.96e-48 170
MS.gene056943.t1 AT2G40250 30.218 321 210 7 34 345 38 353 3.50e-47 164
MS.gene056943.t1 AT3G43570 30.029 343 194 10 9 341 1 307 7.63e-47 162
MS.gene056943.t1 AT5G45950 30.564 337 222 9 12 345 20 347 3.59e-46 161
MS.gene056943.t1 AT1G53920 29.714 350 221 7 30 365 46 384 1.39e-43 155
MS.gene056943.t1 AT1G71120 31.118 331 203 9 27 347 26 341 6.04e-43 153
MS.gene056943.t1 AT3G43550 33.333 270 162 8 30 292 28 286 4.52e-42 149
MS.gene056943.t1 AT5G45960 28.797 316 213 7 28 335 43 354 2.48e-41 149
MS.gene056943.t1 AT1G75930 30.696 316 199 9 34 343 31 332 2.91e-40 145
MS.gene056943.t1 AT1G75920 29.619 341 216 8 15 344 6 333 1.53e-39 143
MS.gene056943.t1 AT2G24560 33.088 272 172 8 31 296 33 300 5.98e-37 136
MS.gene056943.t1 AT1G75910 30.117 342 215 10 14 344 5 333 2.07e-36 135
MS.gene056943.t1 AT1G75920 28.487 337 208 8 28 344 20 343 1.17e-35 133
MS.gene056943.t1 AT5G40990 30.031 323 204 8 34 343 39 352 1.28e-35 134
MS.gene056943.t1 AT3G14225 30.094 319 209 7 34 343 39 352 3.81e-35 132
MS.gene056943.t1 AT3G14225 29.907 321 211 7 34 343 39 356 1.10e-34 131
MS.gene056943.t1 AT2G04020 36.620 213 121 5 31 238 42 245 1.89e-34 128
MS.gene056943.t1 AT2G04020 36.538 208 118 5 31 233 42 240 7.18e-33 125
MS.gene056943.t1 AT1G09390 27.273 374 243 9 1 356 1 363 1.89e-32 125
MS.gene056943.t1 AT1G53940 28.659 328 216 8 34 350 41 361 3.15e-32 124
MS.gene056943.t1 AT3G05180 28.378 370 209 14 26 359 30 379 4.73e-32 124
MS.gene056943.t1 AT1G53990 28.483 323 210 8 34 347 37 347 2.98e-31 122
MS.gene056943.t1 AT2G31550 30.622 209 142 3 137 344 2 208 3.64e-31 118
MS.gene056943.t1 AT1G56670 26.503 366 231 10 11 356 19 366 1.42e-30 120
MS.gene056943.t1 AT3G27950 25.266 376 243 9 6 356 3 365 4.83e-30 119
MS.gene056943.t1 AT1G75920 27.961 304 201 7 46 344 15 305 5.33e-30 117
MS.gene056943.t1 AT1G54790 26.440 382 234 11 10 356 7 376 5.74e-30 119
MS.gene056943.t1 AT1G75920 26.844 339 197 8 15 344 6 302 1.71e-29 115
MS.gene056943.t1 AT4G16233 42.636 129 72 2 238 365 3 130 1.92e-29 110
MS.gene056943.t1 AT3G62280 28.746 327 209 10 27 341 31 345 9.22e-29 115
MS.gene056943.t1 AT3G26430 26.836 354 223 10 31 357 30 374 6.54e-28 113
MS.gene056943.t1 AT1G54020 26.377 345 227 11 11 348 9 333 9.05e-28 112
MS.gene056943.t1 AT1G67830 26.100 341 214 9 29 341 27 357 1.34e-27 112
MS.gene056943.t1 AT3G48460 25.762 361 231 13 8 342 8 357 4.93e-27 110
MS.gene056943.t1 AT1G54790 23.834 386 248 10 6 356 1 375 9.62e-26 107
MS.gene056943.t1 AT3G09930 27.329 322 191 14 34 337 41 337 8.05e-25 103
MS.gene056943.t1 AT3G09930 27.329 322 191 14 34 337 41 337 8.05e-25 103
MS.gene056943.t1 AT1G54030 26.959 319 204 11 34 348 54 347 1.10e-24 104
MS.gene056943.t1 AT1G28640 25.287 348 217 13 36 355 39 371 1.86e-24 103
MS.gene056943.t1 AT5G14450 26.912 353 222 11 31 357 40 382 6.21e-24 102
MS.gene056943.t1 AT5G03610 27.619 315 198 11 34 337 45 340 7.15e-24 101
MS.gene056943.t1 AT1G28600 24.468 376 235 13 13 355 7 366 1.56e-23 100
MS.gene056943.t1 AT1G53940 29.167 264 175 7 34 292 41 297 2.10e-23 99.4
MS.gene056943.t1 AT5G03600 24.845 322 202 9 28 337 10 303 2.36e-23 99.4
MS.gene056943.t1 AT1G31550 24.791 359 229 11 8 338 9 354 2.78e-23 100
MS.gene056943.t1 AT5G03600 24.845 322 202 9 28 337 45 338 4.52e-23 99.4
MS.gene056943.t1 AT1G54010 25.137 366 246 12 7 362 7 354 9.50e-23 98.6
MS.gene056943.t1 AT1G28650 25.215 349 216 12 36 355 41 373 2.90e-22 97.4
MS.gene056943.t1 AT2G27360 27.108 332 208 12 36 343 37 358 3.14e-22 97.4
MS.gene056943.t1 AT1G28570 24.523 367 233 14 8 343 5 358 3.36e-22 97.1
MS.gene056943.t1 AT4G16220 46.429 112 57 2 13 122 11 121 4.36e-22 94.4
MS.gene056943.t1 AT1G54000 24.661 369 242 13 8 362 8 354 7.29e-22 96.3
MS.gene056943.t1 AT4G01130 24.654 361 226 13 13 341 14 360 9.28e-22 95.9
MS.gene056943.t1 AT3G14220 27.762 353 215 13 24 362 24 350 1.59e-21 94.7
MS.gene056943.t1 AT1G54790 22.816 412 246 12 6 356 1 401 7.85e-21 93.6
MS.gene056943.t1 AT1G28580 22.955 379 254 12 1 351 1 369 1.35e-20 92.4
MS.gene056943.t1 AT1G28660 24.207 347 222 12 36 355 39 371 1.67e-20 92.0
MS.gene056943.t1 AT1G56670 26.599 297 185 8 11 292 19 297 2.98e-20 90.1
MS.gene056943.t1 AT1G28670 23.977 342 230 11 36 355 39 372 3.24e-20 91.3
MS.gene056943.t1 AT1G31550 24.100 361 226 12 8 338 9 351 4.05e-20 91.3
MS.gene056943.t1 AT3G62280 27.586 261 170 7 27 280 31 279 8.77e-20 89.0
MS.gene056943.t1 AT1G28610 25.069 363 231 14 1 337 1 348 1.05e-19 89.7
MS.gene056943.t1 AT1G28660 23.919 347 222 13 36 355 39 370 1.53e-19 89.4
MS.gene056943.t1 AT3G14210 26.946 334 199 15 34 349 38 344 1.74e-17 83.6
MS.gene056943.t1 AT2G36325 26.959 319 193 13 34 337 49 342 5.53e-17 81.6
MS.gene056943.t1 AT1G54020 23.413 252 172 6 100 348 14 247 4.88e-16 78.2
MS.gene056943.t1 AT1G54020 23.413 252 172 6 100 348 14 247 4.88e-16 78.2
MS.gene056943.t1 AT1G54020 23.413 252 172 6 100 348 14 247 4.88e-16 78.2
MS.gene056943.t1 AT1G54030 25.856 263 168 9 34 292 54 293 8.61e-15 74.7
MS.gene056943.t1 AT1G54020 24.500 200 143 4 152 348 4 198 9.11e-15 73.6
MS.gene056943.t1 AT4G01130 25.871 201 123 6 160 341 81 274 1.04e-14 74.3
MS.gene056943.t1 AT1G28600 28.814 177 102 7 13 172 7 176 1.72e-12 66.6
MS.gene056943.t1 AT5G03590 37.838 111 59 4 3 110 8 111 4.07e-11 62.4

Find 76 sgRNAs with CRISPR-Local

Find 116 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCAATTGGTTAATTATTT+TGG 0.067122 2.3:+68279132 MS.gene056943:CDS
TTCATCTATGTAAATGTTTA+TGG 0.121393 2.3:+68279702 MS.gene056943:CDS
ATAGGAATGGGTTCTTATTT+TGG 0.148038 2.3:+68279940 MS.gene056943:CDS
GCAAGGAAAATGGCGTTATT+TGG 0.222275 2.3:+68279525 MS.gene056943:CDS
AAAGCTAATTACTTACCTTA+TGG 0.274170 2.3:+68278163 MS.gene056943:CDS
AATTTAACAGCTGAGCAATT+AGG 0.278597 2.3:+68278843 MS.gene056943:intron
GAAGCTGGAAATAGTGTTAT+TGG 0.291749 2.3:+68279981 MS.gene056943:CDS
TAATTATGGGGCAAGGAAAA+TGG 0.308506 2.3:+68279515 MS.gene056943:CDS
CCTTATGGAATTGACTTTCC+TGG 0.310132 2.3:+68278178 MS.gene056943:CDS
GGAGACTCTTTGGTGGATAA+TGG 0.317349 2.3:+68278112 MS.gene056943:CDS
CTCCAAAATAATTAACCAAT+TGG 0.331305 2.3:-68279134 None:intergenic
ATTTAACAGCTGAGCAATTA+GGG 0.333153 2.3:+68278844 MS.gene056943:intron
GCTACACATGTTCTACCATC+TGG 0.337001 2.3:-68279594 None:intergenic
AGCAAGTGCATTTATACAAT+TGG 0.341319 2.3:+68279183 MS.gene056943:CDS
GACTTTCCTGGCGGACCAAC+TGG 0.344384 2.3:+68278190 MS.gene056943:CDS
ATCTCTCTATGATGAATATA+GGG 0.348079 2.3:+68278017 MS.gene056943:CDS
GATCTCTCTATGATGAATAT+AGG 0.349653 2.3:+68278016 MS.gene056943:CDS
AAGCATATGCTCAGCAACTT+AGG 0.363725 2.3:+68279304 MS.gene056943:CDS
CTACTTGTAGAATAGATTGT+AGG 0.370029 2.3:-68279243 None:intergenic
TTGAGTTTGTGGAGTGGAAT+TGG 0.370240 2.3:+68278055 MS.gene056943:CDS
TTATTTGGAGTTGGTCAAAT+AGG 0.381637 2.3:+68279540 MS.gene056943:CDS
GCTAAACGATTAATATCAAT+AGG 0.383756 2.3:-68280044 None:intergenic
GTGCATTTATACAATTGGAT+TGG 0.387852 2.3:+68279188 MS.gene056943:CDS
TAGGCATGAAATAATTGTTA+AGG 0.404750 2.3:-68279224 None:intergenic
TGCATTTATACAATTGGATT+GGG 0.411957 2.3:+68279189 MS.gene056943:CDS
TGACTCCTCTGAGTATTTGC+CGG 0.412282 2.3:-68278905 None:intergenic
CCAATTGGGACACTGTCCTT+TGG 0.421179 2.3:-68279119 None:intergenic
AACCTTCCAGTTGGTCCGCC+AGG 0.439561 2.3:-68278196 None:intergenic
GCCCTTTCAACCTGCATGTA+GGG 0.443708 2.3:+68279917 MS.gene056943:CDS
AATTATGCTTCAGCAGCTGC+TGG 0.456416 2.3:+68278927 MS.gene056943:CDS
AGAAGAAACAGGACAACAAT+TGG 0.456656 2.3:+68278956 MS.gene056943:CDS
GCATTTCATCCAACTGAAGC+TGG 0.464411 2.3:+68279966 MS.gene056943:CDS
ACATAGATGAATCTTGCATC+AGG 0.464951 2.3:-68279690 None:intergenic
TCCAAAATAATTAACCAATT+GGG 0.467264 2.3:-68279133 None:intergenic
AAATAATTACCATAGGATGA+TGG 0.485604 2.3:-68279750 None:intergenic
GCTGAGCAATTAGGGTTCAA+TGG 0.486991 2.3:+68278852 MS.gene056943:intron
ATCCCTACATGCAGGTTGAA+AGG 0.488239 2.3:-68279919 None:intergenic
AGCATATGCTCAGCAACTTA+GGG 0.488920 2.3:+68279305 MS.gene056943:CDS
TCCCTACATGCAGGTTGAAA+GGG 0.491272 2.3:-68279918 None:intergenic
CCAAAGGACAGTGTCCCAAT+TGG 0.491636 2.3:+68279119 MS.gene056943:CDS
AATAATTACCATAGGATGAT+GGG 0.493093 2.3:-68279749 None:intergenic
ACACTATTTCCAGCTTCAGT+TGG 0.498634 2.3:-68279975 None:intergenic
TGAATCTTGCATCAGGAAGT+TGG 0.499393 2.3:-68279683 None:intergenic
GCTGGAATCAGAGAAGAAAC+AGG 0.503846 2.3:+68278945 MS.gene056943:CDS
AAAATGGCGTTATTTGGAGT+TGG 0.505537 2.3:+68279531 MS.gene056943:CDS
TTGTATAAATGCACTTGCTA+AGG 0.511780 2.3:-68279179 None:intergenic
CTACACATGTTCTACCATCT+GGG 0.517651 2.3:-68279593 None:intergenic
GCAAATCAATTATTCAACAA+TGG 0.525590 2.3:+68279630 MS.gene056943:CDS
TGCCCTTTCAACCTGCATGT+AGG 0.528510 2.3:+68279916 MS.gene056943:CDS
CCAGGAAAGTCAATTCCATA+AGG 0.532610 2.3:-68278178 None:intergenic
AAAACCACTGTTGATGTGAT+TGG 0.535324 2.3:+68278229 MS.gene056943:CDS
CTAAACGATTAATATCAATA+GGG 0.537755 2.3:-68280043 None:intergenic
CCATTGGAAAACCTTCCAGT+TGG 0.546631 2.3:-68278205 None:intergenic
CTGCATGTAGGGATAGGAAT+GGG 0.549161 2.3:+68279928 MS.gene056943:CDS
GAATATAGGGATAGTTGTGT+TGG 0.558087 2.3:+68278030 MS.gene056943:CDS
ATAACCAGCCCATCATCCTA+TGG 0.566345 2.3:+68279741 MS.gene056943:CDS
GCTGAGCATATGCTTGAAGA+AGG 0.570230 2.3:-68279296 None:intergenic
TTGGCTCAAAACAGCCCAGA+TGG 0.578429 2.3:+68279579 MS.gene056943:CDS
TTCCTGGCGGACCAACTGGA+AGG 0.581746 2.3:+68278194 MS.gene056943:CDS
CCTGCATGTAGGGATAGGAA+TGG 0.583234 2.3:+68279927 MS.gene056943:CDS
TTCAACCTGCATGTAGGGAT+AGG 0.585091 2.3:+68279922 MS.gene056943:CDS
CCGGCCTCTAGCTGATGCAT+AGG 0.588218 2.3:-68278886 None:intergenic
ATTACCATAGGATGATGGGC+TGG 0.593277 2.3:-68279745 None:intergenic
CCTTCCTATGCATCAGCTAG+AGG 0.593466 2.3:+68278882 MS.gene056943:CDS
AATGCTGGATGCTGTGGTGT+AGG 0.601465 2.3:+68279867 MS.gene056943:CDS
CCATTCCTATCCCTACATGC+AGG 0.604308 2.3:-68279927 None:intergenic
AGGACATTAGCATATTGTTG+TGG 0.611755 2.3:-68279276 None:intergenic
AGGTTGTACCCCAAATGCAT+TGG 0.618893 2.3:+68279560 MS.gene056943:CDS
CCTATGCATCAGCTAGAGGC+CGG 0.620195 2.3:+68278886 MS.gene056943:CDS
CCTCTAGCTGATGCATAGGA+AGG 0.633798 2.3:-68278882 None:intergenic
GGCAAGTGCAAAATTACCAA+AGG 0.635259 2.3:+68279103 MS.gene056943:CDS
GTTACAAATGCTGGATGCTG+TGG 0.642532 2.3:+68279861 MS.gene056943:CDS
AGAGGCCGGCAAATACTCAG+AGG 0.655660 2.3:+68278900 MS.gene056943:CDS
TATGGAATTGACTTTCCTGG+CGG 0.683663 2.3:+68278181 MS.gene056943:CDS
CTCACCAATCACATCAACAG+TGG 0.701918 2.3:-68278233 None:intergenic
TGTGGTGTAGGAAGAAACAA+TGG 0.764473 2.3:+68279879 MS.gene056943:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACAATTTAATTTTACAATT+GGG + chr2.3:68279405-68279424 MS.gene056943:intron 10.0%
!!! ATTCAGATTTTATATAATTA+TGG + chr2.3:68279501-68279520 MS.gene056943:intron 10.0%
!!! TAACAATTTAATTTTACAAT+TGG + chr2.3:68279404-68279423 MS.gene056943:intron 10.0%
!!! TGTGAATTTAAATTATTTTA+GGG - chr2.3:68279779-68279798 None:intergenic 10.0%
!!! TTCAGATTTTATATAATTAT+GGG + chr2.3:68279502-68279521 MS.gene056943:intron 10.0%
!!! TTGTGAATTTAAATTATTTT+AGG - chr2.3:68279780-68279799 None:intergenic 10.0%
!! ATAAAAATTTCAATTACCAA+AGG - chr2.3:68279438-68279457 None:intergenic 15.0%
!!! ATAATTTATCACTATTTTGT+AGG + chr2.3:68279059-68279078 MS.gene056943:intron 15.0%
!!! ATTATCTTTTTTCTTCATTT+GGG + chr2.3:68279012-68279031 MS.gene056943:intron 15.0%
!!! CGTGATTAATTTATTTATTT+TGG + chr2.3:68278265-68278284 MS.gene056943:intron 15.0%
!!! TAATTTATCACTATTTTGTA+GGG + chr2.3:68279060-68279079 MS.gene056943:intron 15.0%
!!! TCAGATTTTATATAATTATG+GGG + chr2.3:68279503-68279522 MS.gene056943:intron 15.0%
!!! TTTTTTTCTTTCTAATTTTC+AGG + chr2.3:68279831-68279850 MS.gene056943:intron 15.0%
!! CTAAACGATTAATATCAATA+GGG - chr2.3:68280046-68280065 None:intergenic 20.0%
!! TCCAAAATAATTAACCAATT+GGG - chr2.3:68279136-68279155 None:intergenic 20.0%
!! TTCATCTATGTAAATGTTTA+TGG + chr2.3:68279702-68279721 MS.gene056943:CDS 20.0%
!!! GATTATCTTTTTTCTTCATT+TGG + chr2.3:68279011-68279030 MS.gene056943:intron 20.0%
! AAAGCTAATTACTTACCTTA+TGG + chr2.3:68278163-68278182 MS.gene056943:CDS 25.0%
! AAATAATTACCATAGGATGA+TGG - chr2.3:68279753-68279772 None:intergenic 25.0%
! AATAATTACCATAGGATGAT+GGG - chr2.3:68279752-68279771 None:intergenic 25.0%
! ATAGAAAATAGTTAAGCATG+TGG - chr2.3:68279041-68279060 None:intergenic 25.0%
! ATCTCTCTATGATGAATATA+GGG + chr2.3:68278017-68278036 MS.gene056943:CDS 25.0%
! CTCCAAAATAATTAACCAAT+TGG - chr2.3:68279137-68279156 None:intergenic 25.0%
! GCAAATCAATTATTCAACAA+TGG + chr2.3:68279630-68279649 MS.gene056943:CDS 25.0%
! GCTAAACGATTAATATCAAT+AGG - chr2.3:68280047-68280066 None:intergenic 25.0%
! TACTCTTGTCTAACATTTAA+TGG + chr2.3:68278819-68278838 MS.gene056943:intron 25.0%
! TAGGCATGAAATAATTGTTA+AGG - chr2.3:68279227-68279246 None:intergenic 25.0%
! TCTCCAAAAATAAAATAGCA+AGG - chr2.3:68278097-68278116 None:intergenic 25.0%
! TGCATTTATACAATTGGATT+GGG + chr2.3:68279189-68279208 MS.gene056943:CDS 25.0%
!! CAACAATTGAACAACTTTTA+AGG - chr2.3:68279473-68279492 None:intergenic 25.0%
!! GTTTTGTGAGTGTTTATAAA+CGG - chr2.3:68278450-68278469 None:intergenic 25.0%
!! TCCCAATTGGTTAATTATTT+TGG + chr2.3:68279132-68279151 MS.gene056943:CDS 25.0%
!! TTTTATATAATTATGGGGCA+AGG + chr2.3:68279508-68279527 MS.gene056943:CDS 25.0%
!!! ATATTTTTTCATCAGAGAGA+CGG + chr2.3:68279363-68279382 MS.gene056943:intron 25.0%
!!! GTTCCTTGCTATTTTATTTT+TGG + chr2.3:68278091-68278110 MS.gene056943:CDS 25.0%
!!! TTTTATTTTTGGAGACTCTT+TGG + chr2.3:68278102-68278121 MS.gene056943:CDS 25.0%
AATTTAACAGCTGAGCAATT+AGG + chr2.3:68278843-68278862 MS.gene056943:intron 30.0%
AGCAAGTGCATTTATACAAT+TGG + chr2.3:68279183-68279202 MS.gene056943:CDS 30.0%
AGGGAGAAAATAATTACCAT+AGG - chr2.3:68279760-68279779 None:intergenic 30.0%
ATTTAACAGCTGAGCAATTA+GGG + chr2.3:68278844-68278863 MS.gene056943:intron 30.0%
CTACTTGTAGAATAGATTGT+AGG - chr2.3:68279246-68279265 None:intergenic 30.0%
GATCTCTCTATGATGAATAT+AGG + chr2.3:68278016-68278035 MS.gene056943:CDS 30.0%
GCTAATTAAGAATGCAAAGT+TGG - chr2.3:68278358-68278377 None:intergenic 30.0%
GTGCATTTATACAATTGGAT+TGG + chr2.3:68279188-68279207 MS.gene056943:CDS 30.0%
! TTATTTGGAGTTGGTCAAAT+AGG + chr2.3:68279540-68279559 MS.gene056943:CDS 30.0%
! TTGTATAAATGCACTTGCTA+AGG - chr2.3:68279182-68279201 None:intergenic 30.0%
!! ATAGGAATGGGTTCTTATTT+TGG + chr2.3:68279940-68279959 MS.gene056943:CDS 30.0%
!!! GACAACGAATTAGTTTTAGA+GGG + chr2.3:68279082-68279101 MS.gene056943:CDS 30.0%
!!! TAGGAATGGGTTCTTATTTT+GGG + chr2.3:68279941-68279960 MS.gene056943:CDS 30.0%
AAAACCACTGTTGATGTGAT+TGG + chr2.3:68278229-68278248 MS.gene056943:CDS 35.0%
ACATAGATGAATCTTGCATC+AGG - chr2.3:68279693-68279712 None:intergenic 35.0%
AGAAGAAACAGGACAACAAT+TGG + chr2.3:68278956-68278975 MS.gene056943:CDS 35.0%
AGGACATTAGCATATTGTTG+TGG - chr2.3:68279279-68279298 None:intergenic 35.0%
GAAGCTGGAAATAGTGTTAT+TGG + chr2.3:68279981-68280000 MS.gene056943:CDS 35.0%
GAATATAGGGATAGTTGTGT+TGG + chr2.3:68278030-68278049 MS.gene056943:CDS 35.0%
TAATTATGGGGCAAGGAAAA+TGG + chr2.3:68279515-68279534 MS.gene056943:CDS 35.0%
! AAAATGGCGTTATTTGGAGT+TGG + chr2.3:68279531-68279550 MS.gene056943:CDS 35.0%
! CTTTTGCAATAGAAGTGAGT+TGG - chr2.3:68278147-68278166 None:intergenic 35.0%
!! TATAGCTTTGTATGCATGCA+AGG + chr2.3:68278783-68278802 MS.gene056943:intron 35.0%
!! TGTTTTGAGCCAATGCATTT+GGG - chr2.3:68279572-68279591 None:intergenic 35.0%
!!! GGACAACGAATTAGTTTTAG+AGG + chr2.3:68279081-68279100 MS.gene056943:CDS 35.0%
!!! GGTTTTAGAGTTACAAATGC+TGG + chr2.3:68279852-68279871 MS.gene056943:intron 35.0%
!!! TATTTTTGGAGACTCTTTGG+TGG + chr2.3:68278105-68278124 MS.gene056943:CDS 35.0%
!!! TTGTGTTGGTTTTGAGTTTG+TGG + chr2.3:68278044-68278063 MS.gene056943:CDS 35.0%
AAGCATATGCTCAGCAACTT+AGG + chr2.3:68279304-68279323 MS.gene056943:CDS 40.0%
ACACTATTTCCAGCTTCAGT+TGG - chr2.3:68279978-68279997 None:intergenic 40.0%
AGCATATGCTCAGCAACTTA+GGG + chr2.3:68279305-68279324 MS.gene056943:CDS 40.0%
CCAGGAAAGTCAATTCCATA+AGG - chr2.3:68278181-68278200 None:intergenic 40.0%
CTACACATGTTCTACCATCT+GGG - chr2.3:68279596-68279615 None:intergenic 40.0%
GCAAGGAAAATGGCGTTATT+TGG + chr2.3:68279525-68279544 MS.gene056943:CDS 40.0%
GGCAAGTGCAAAATTACCAA+AGG + chr2.3:68279103-68279122 MS.gene056943:CDS 40.0%
TGAATCTTGCATCAGGAAGT+TGG - chr2.3:68279686-68279705 None:intergenic 40.0%
TGTGGTGTAGGAAGAAACAA+TGG + chr2.3:68279879-68279898 MS.gene056943:CDS 40.0%
TTGAGTTTGTGGAGTGGAAT+TGG + chr2.3:68278055-68278074 MS.gene056943:CDS 40.0%
! CCTTATGGAATTGACTTTCC+TGG + chr2.3:68278178-68278197 MS.gene056943:CDS 40.0%
! TATGGAATTGACTTTCCTGG+CGG + chr2.3:68278181-68278200 MS.gene056943:CDS 40.0%
!! ATCAACAGTGGTTTTGCCAT+TGG - chr2.3:68278224-68278243 None:intergenic 40.0%
!! CTGTTTTGAGCCAATGCATT+TGG - chr2.3:68279573-68279592 None:intergenic 40.0%
!! GTTTTGAGCCAATGCATTTG+GGG - chr2.3:68279571-68279590 None:intergenic 40.0%
!!! TTGGTTTTGAGTTTGTGGAG+TGG + chr2.3:68278049-68278068 MS.gene056943:CDS 40.0%
AATTATGCTTCAGCAGCTGC+TGG + chr2.3:68278927-68278946 MS.gene056943:CDS 45.0%
ACAATTGGGACACTGTCCTT+TGG + chr2.3:68279419-68279438 MS.gene056943:intron 45.0%
AGGTTGTACCCCAAATGCAT+TGG + chr2.3:68279560-68279579 MS.gene056943:CDS 45.0%
ATAACCAGCCCATCATCCTA+TGG + chr2.3:68279741-68279760 MS.gene056943:CDS 45.0%
CCATTGGAAAACCTTCCAGT+TGG - chr2.3:68278208-68278227 None:intergenic 45.0%
CTCACCAATCACATCAACAG+TGG - chr2.3:68278236-68278255 None:intergenic 45.0%
CTGCATGTAGGGATAGGAAT+GGG + chr2.3:68279928-68279947 MS.gene056943:CDS 45.0%
GCATTTCATCCAACTGAAGC+TGG + chr2.3:68279966-68279985 MS.gene056943:CDS 45.0%
GCTACACATGTTCTACCATC+TGG - chr2.3:68279597-68279616 None:intergenic 45.0%
GCTGAGCAATTAGGGTTCAA+TGG + chr2.3:68278852-68278871 MS.gene056943:intron 45.0%
GCTGAGCATATGCTTGAAGA+AGG - chr2.3:68279299-68279318 None:intergenic 45.0%
GCTGGAATCAGAGAAGAAAC+AGG + chr2.3:68278945-68278964 MS.gene056943:CDS 45.0%
GTTACAAATGCTGGATGCTG+TGG + chr2.3:68279861-68279880 MS.gene056943:CDS 45.0%
TGACTCCTCTGAGTATTTGC+CGG - chr2.3:68278908-68278927 None:intergenic 45.0%
TTCAACCTGCATGTAGGGAT+AGG + chr2.3:68279922-68279941 MS.gene056943:CDS 45.0%
! ATCCCTACATGCAGGTTGAA+AGG - chr2.3:68279922-68279941 None:intergenic 45.0%
! CCAACTGGAAGGTTTTCCAA+TGG + chr2.3:68278205-68278224 MS.gene056943:CDS 45.0%
! GGAGACTCTTTGGTGGATAA+TGG + chr2.3:68278112-68278131 MS.gene056943:CDS 45.0%
! TCCCTACATGCAGGTTGAAA+GGG - chr2.3:68279921-68279940 None:intergenic 45.0%
!! ATTACCATAGGATGATGGGC+TGG - chr2.3:68279748-68279767 None:intergenic 45.0%
AATGCTGGATGCTGTGGTGT+AGG + chr2.3:68279867-68279886 MS.gene056943:CDS 50.0%
CCAAAGGACAGTGTCCCAAT+TGG + chr2.3:68279119-68279138 MS.gene056943:CDS 50.0%
CCAATTGGGACACTGTCCTT+TGG - chr2.3:68279122-68279141 None:intergenic 50.0%
CCATTCCTATCCCTACATGC+AGG - chr2.3:68279930-68279949 None:intergenic 50.0%
CCTCTAGCTGATGCATAGGA+AGG - chr2.3:68278885-68278904 None:intergenic 50.0%
CCTGCATGTAGGGATAGGAA+TGG + chr2.3:68279927-68279946 MS.gene056943:CDS 50.0%
CCTTCCTATGCATCAGCTAG+AGG + chr2.3:68278882-68278901 MS.gene056943:CDS 50.0%
GCCCTTTCAACCTGCATGTA+GGG + chr2.3:68279917-68279936 MS.gene056943:CDS 50.0%
TGCCCTTTCAACCTGCATGT+AGG + chr2.3:68279916-68279935 MS.gene056943:CDS 50.0%
TTGGCTCAAAACAGCCCAGA+TGG + chr2.3:68279579-68279598 MS.gene056943:CDS 50.0%
AGAGGCCGGCAAATACTCAG+AGG + chr2.3:68278900-68278919 MS.gene056943:CDS 55.0%
CCTATGCATCAGCTAGAGGC+CGG + chr2.3:68278886-68278905 MS.gene056943:CDS 55.0%
AACCTTCCAGTTGGTCCGCC+AGG - chr2.3:68278199-68278218 None:intergenic 60.0%
CCGGCCTCTAGCTGATGCAT+AGG - chr2.3:68278889-68278908 None:intergenic 60.0%
! GACTTTCCTGGCGGACCAAC+TGG + chr2.3:68278190-68278209 MS.gene056943:CDS 60.0%
! TTCCTGGCGGACCAACTGGA+AGG + chr2.3:68278194-68278213 MS.gene056943:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 68278004 68280076 68278004 ID=MS.gene056943
chr2.3 mRNA 68278004 68280076 68278004 ID=MS.gene056943.t1;Parent=MS.gene056943
chr2.3 exon 68278004 68278250 68278004 ID=MS.gene056943.t1.exon1;Parent=MS.gene056943.t1
chr2.3 CDS 68278004 68278250 68278004 ID=cds.MS.gene056943.t1;Parent=MS.gene056943.t1
chr2.3 exon 68278853 68278977 68278853 ID=MS.gene056943.t1.exon2;Parent=MS.gene056943.t1
chr2.3 CDS 68278853 68278977 68278853 ID=cds.MS.gene056943.t1;Parent=MS.gene056943.t1
chr2.3 exon 68279081 68279326 68279081 ID=MS.gene056943.t1.exon3;Parent=MS.gene056943.t1
chr2.3 CDS 68279081 68279326 68279081 ID=cds.MS.gene056943.t1;Parent=MS.gene056943.t1
chr2.3 exon 68279507 68279762 68279507 ID=MS.gene056943.t1.exon4;Parent=MS.gene056943.t1
chr2.3 CDS 68279507 68279762 68279507 ID=cds.MS.gene056943.t1;Parent=MS.gene056943.t1
chr2.3 exon 68279853 68280076 68279853 ID=MS.gene056943.t1.exon5;Parent=MS.gene056943.t1
chr2.3 CDS 68279853 68280076 68279853 ID=cds.MS.gene056943.t1;Parent=MS.gene056943.t1
Gene Sequence

>MS.gene056943

ATGGCATTTTGGGATCTCTCTATGATGAATATAGGGATAGTTGTGTTGGTTTTGAGTTTGTGGAGTGGAATTGGAGTTGCACAACAAGTTCCTTGCTATTTTATTTTTGGAGACTCTTTGGTGGATAATGGTAACAACAACCAACTCACTTCTATTGCAAAAGCTAATTACTTACCTTATGGAATTGACTTTCCTGGCGGACCAACTGGAAGGTTTTCCAATGGCAAAACCACTGTTGATGTGATTGGTGAGATTGTTTTTCGTGATTAATTTATTTATTTTGGAGAATTAAATATTATTTCTGTTTAATAAAAAAATATACTCAAAAAATTAATATTAAAAAAAATTAAGCCAACTTTGCATTCTTAATTAGCTAGCTTATGTGATCGTTTGTTACAAATTATAAAAAAGTGATATATTTTAAAAAAGAAGTCGTTTTGTGACCGTTTATAAACACTCACAAAACGACTTTTTAAAAACATGATGAAAATCATTTTTTTTTAAATCAGTTATAAACATGATGTTTTAGAAACTATTCAAAACAACTTCTCATTGTTAAAAAAATGTAACAAATAAAATCTTTTAAAAATGATTATTTTGTTTAAATAGTTTTTCAATGTAAAAAAAAAAGAAGTGATTTTTTCACATTATATAAGAATATTTTGAATCTTAGATGACTTAATACTATAACTTTTCATTTGTGCTGTACAATCAGTATTACTCTAGTTTATTTATCTTTCTCAACTATATATATTTATGATTTGACTCTTTAATTAATATATAGCTTTGTATGCATGCAAGGAATTGTCTTTATTTACTCTTGTCTAACATTTAATGGAAATTTAACAGCTGAGCAATTAGGGTTCAATGGTTACATACCTTCCTATGCATCAGCTAGAGGCCGGCAAATACTCAGAGGAGTCAATTATGCTTCAGCAGCTGCTGGAATCAGAGAAGAAACAGGACAACAATTGGTACTTTTTTTTACTTATAATAATGTCACATATGATTATCTTTTTTCTTCATTTGGGTAACCACATGCTTAACTATTTTCTATAATTTATCACTATTTTGTAGGGACAACGAATTAGTTTTAGAGGGCAAGTGCAAAATTACCAAAGGACAGTGTCCCAATTGGTTAATTATTTTGGAGATGAGAACACTGCTGCAAATTACCTTAGCAAGTGCATTTATACAATTGGATTGGGTAGCAATGATTACCTTAACAATTATTTCATGCCTACAATCTATTCTACAAGTAGACAATTCACACCACAACAATATGCTAATGTCCTTCTTCAAGCATATGCTCAGCAACTTAGGGTCAGACTCTTTCTCTATATGTACTTTTTTGTTTATATATTTTTTCATCAGAGAGACGGTCGTAAAATAATCATTAATAACAATTTAATTTTACAATTGGGACACTGTCCTTTGGTAATTGAAATTTTTATATATGCTAATGTCCTTAAAAGTTGTTCAATTGTTGTGTTTGTGATTCAGATTTTATATAATTATGGGGCAAGGAAAATGGCGTTATTTGGAGTTGGTCAAATAGGTTGTACCCCAAATGCATTGGCTCAAAACAGCCCAGATGGTAGAACATGTGTAGCAAGAATCAATTCTGCAAATCAATTATTCAACAATGGATTAAGATCTCTTGTTGATCAACTCAATAACCAACTTCCTGATGCAAGATTCATCTATGTAAATGTTTATGGTATCTTTCAAGACATCATAACCAGCCCATCATCCTATGGTAATTATTTTCTCCCTAAAATAATTTAAATTCACAATTCATCAATTTTTCAAGTTATCAAAATAATTTTTTTTTCTTTCTAATTTTCAGGTTTTAGAGTTACAAATGCTGGATGCTGTGGTGTAGGAAGAAACAATGGTCAAATTACATGTTTGCCCTTTCAACCTGCATGTAGGGATAGGAATGGGTTCTTATTTTGGGATGCATTTCATCCAACTGAAGCTGGAAATAGTGTTATTGGTAGAAGAGCTTACAATGCTCAATCTGCATCAGATGCTTACCCTATTGATATTAATCGTTTAGCTCAAATCTAA

Protein sequence

>MS.gene056943.t1

MAFWDLSMMNIGIVVLVLSLWSGIGVAQQVPCYFIFGDSLVDNGNNNQLTSIAKANYLPYGIDFPGGPTGRFSNGKTTVDVIAEQLGFNGYIPSYASARGRQILRGVNYASAAAGIREETGQQLGQRISFRGQVQNYQRTVSQLVNYFGDENTAANYLSKCIYTIGLGSNDYLNNYFMPTIYSTSRQFTPQQYANVLLQAYAQQLRILYNYGARKMALFGVGQIGCTPNALAQNSPDGRTCVARINSANQLFNNGLRSLVDQLNNQLPDARFIYVNVYGIFQDIITSPSSYGFRVTNAGCCGVGRNNGQITCLPFQPACRDRNGFLFWDAFHPTEAGNSVIGRRAYNAQSASDAYPIDINRLAQI