Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057251.t1 | XP_003602390.1 | 97.6 | 295 | 5 | 1 | 1 | 295 | 1 | 293 | 1.00E-150 | 542.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057251.t1 | G7J908 | 97.6 | 295 | 5 | 1 | 1 | 295 | 1 | 293 | 7.4e-151 | 542.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057251 | MS.gene06603 | 0.8333 | 5.77E-56 | -1.69E-46 |
| MS.gene057251 | MS.gene069339 | -0.807779 | 4.28E-50 | -1.69E-46 |
| MS.gene057251 | MS.gene80994 | -0.815449 | 9.19E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057251.t1 | MTR_3g092810 | 97.966 | 295 | 4 | 1 | 1 | 295 | 1 | 293 | 0.0 | 589 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057251.t1 | AT5G24460 | 56.592 | 311 | 100 | 9 | 2 | 294 | 6 | 299 | 1.47e-96 | 286 |
Find 93 sgRNAs with CRISPR-Local
Find 108 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGTGGAGGAGAGGAATTC+AGG | 0.229370 | 3.2:-78092969 | MS.gene057251:CDS |
| GGTTGTTACGGTTCGGGTTG+TGG | 0.301094 | 3.2:-78093204 | MS.gene057251:CDS |
| CCTCTAACAGCAGCAGATTC+CGG | 0.302641 | 3.2:+78093077 | None:intergenic |
| TGCTGCTGTTAGAGGGATTA+AGG | 0.305461 | 3.2:-78093069 | MS.gene057251:CDS |
| CCGGAATCTGCTGCTGTTAG+AGG | 0.305903 | 3.2:-78093077 | MS.gene057251:CDS |
| CGCCACGTGGGGTGTTAAAC+CGG | 0.312074 | 3.2:-78093315 | MS.gene057251:CDS |
| GTTGTTACGGTTCGGGTTGT+GGG | 0.317057 | 3.2:-78093203 | MS.gene057251:CDS |
| CGTTCAGGTTGTTACGGTTC+GGG | 0.323431 | 3.2:-78093210 | MS.gene057251:CDS |
| ACCTCCTGTTCGAACCGTTC+AGG | 0.336327 | 3.2:-78093225 | MS.gene057251:CDS |
| CTCTAACAGCAGCAGATTCC+GGG | 0.351885 | 3.2:+78093078 | None:intergenic |
| CCGTTCAGGTTGTTACGGTT+CGG | 0.359505 | 3.2:-78093211 | MS.gene057251:CDS |
| TTGCGACGGTTATTTCTGTT+AGG | 0.364535 | 3.2:+78093398 | None:intergenic |
| TGCTACAGTGGAGGGTTTGC+CGG | 0.370222 | 3.2:-78092901 | MS.gene057251:CDS |
| AGCTTGGGTCTGTGGTTAAC+GGG | 0.370328 | 3.2:-78093043 | MS.gene057251:CDS |
| GTTATTTCTGTTAGGGTTTG+AGG | 0.370357 | 3.2:+78093406 | None:intergenic |
| GGGTCTTATCCTGGTTTGCC+TGG | 0.373494 | 3.2:-78092948 | MS.gene057251:CDS |
| TCTCTGGCTTGAACTTTCTC+AGG | 0.375795 | 3.2:-78093273 | MS.gene057251:CDS |
| TTATGAACGTTCTTAGTTCC+CGG | 0.375830 | 3.2:+78093296 | None:intergenic |
| ACTCTCATCTCATACGAATT+CGG | 0.415365 | 3.2:+78092987 | None:intergenic |
| AAAGGACAGTTTGTTGTTGT+GGG | 0.416143 | 3.2:+78093518 | None:intergenic |
| GCAGATTCCGGGTCCTCATT+CGG | 0.426978 | 3.2:+78093089 | None:intergenic |
| TGATAAGAAAGTTGCACATC+AGG | 0.427025 | 3.2:-78092832 | MS.gene057251:CDS |
| GAGCTTGGGTCTGTGGTTAA+CGG | 0.429971 | 3.2:-78093044 | MS.gene057251:CDS |
| AGTAAAAGATCAGGTAAGGA+AGG | 0.438102 | 3.2:+78093593 | None:intergenic |
| ACAACCTGAACGGTTCGAAC+AGG | 0.440068 | 3.2:+78093221 | None:intergenic |
| GAGTGGAGGAGAGGAATTCA+GGG | 0.441498 | 3.2:-78092968 | MS.gene057251:CDS |
| AATCCTTGTGGAATCGCATC+AGG | 0.445603 | 3.2:-78093168 | MS.gene057251:CDS |
| GGAGAGGGGTAGGCCGTTGT+CGG | 0.448380 | 3.2:-78093123 | MS.gene057251:CDS |
| CTAAGAACGTTCATAATCTC+TGG | 0.452904 | 3.2:-78093289 | MS.gene057251:CDS |
| TGCGACGGTTATTTCTGTTA+GGG | 0.460191 | 3.2:+78093399 | None:intergenic |
| TTGAGATTGAGATTTGTTAG+TGG | 0.463013 | 3.2:+78093620 | None:intergenic |
| AGGAATTCAGGGTCTTATCC+TGG | 0.469785 | 3.2:-78092957 | MS.gene057251:CDS |
| AGGACAGTTTGTTGTTGTGG+GGG | 0.472828 | 3.2:+78093520 | None:intergenic |
| GTCTGTGGTTAACGGGGAAA+CGG | 0.481681 | 3.2:-78093036 | MS.gene057251:CDS |
| GAAAGGACAGTTTGTTGTTG+TGG | 0.483133 | 3.2:+78093517 | None:intergenic |
| GTTCGGGTTGTGGGGAAAGA+TGG | 0.484452 | 3.2:-78093194 | MS.gene057251:CDS |
| CGCCGCAATCTCTCTCTGAA+TGG | 0.485327 | 3.2:-78093367 | MS.gene057251:CDS |
| AGAGGGATTAAGGAAGAGCT+TGG | 0.490718 | 3.2:-78093059 | MS.gene057251:CDS |
| AGTGCAGTTAGTAAAAGATC+AGG | 0.496275 | 3.2:+78093584 | None:intergenic |
| TCGAACCGTTCAGGTTGTTA+CGG | 0.497469 | 3.2:-78093216 | MS.gene057251:CDS |
| GATGGAAAAGTGAGGGAGAG+GGG | 0.500090 | 3.2:-78093137 | MS.gene057251:CDS |
| CTGATGGAAAAGTGAGGGAG+AGG | 0.501444 | 3.2:-78093139 | MS.gene057251:CDS |
| GATGAAGCCGAATGAGGACC+CGG | 0.511167 | 3.2:-78093096 | MS.gene057251:CDS |
| TTGTTAGTGGTTGTAACGGT+GGG | 0.515364 | 3.2:+78093633 | None:intergenic |
| GGCTTCATCTTCTCCGACAA+CGG | 0.523703 | 3.2:+78093110 | None:intergenic |
| GAGGGATTAAGGAAGAGCTT+GGG | 0.532159 | 3.2:-78093058 | MS.gene057251:CDS |
| GAAAAGTGAGGGAGAGGGGT+AGG | 0.532588 | 3.2:-78093133 | MS.gene057251:CDS |
| TAAGGAAGAGCTTGGGTCTG+TGG | 0.538049 | 3.2:-78093051 | MS.gene057251:CDS |
| AGTTAGTAAAAGATCAGGTA+AGG | 0.541132 | 3.2:+78093589 | None:intergenic |
| AAGGACAGTTTGTTGTTGTG+GGG | 0.546084 | 3.2:+78093519 | None:intergenic |
| ATGAGATGAGAGTGGAGGAG+AGG | 0.547545 | 3.2:-78092977 | MS.gene057251:CDS |
| CGGAATCTGCTGCTGTTAGA+GGG | 0.548193 | 3.2:-78093076 | MS.gene057251:CDS |
| TTTGTTAGTGGTTGTAACGG+TGG | 0.554951 | 3.2:+78093632 | None:intergenic |
| TGATGGAAAAGTGAGGGAGA+GGG | 0.557496 | 3.2:-78093138 | MS.gene057251:CDS |
| TTCAGATTCCTTCGCCACGT+GGG | 0.557872 | 3.2:-78093327 | MS.gene057251:CDS |
| GCCACGTGGGGTGTTAAACC+GGG | 0.559559 | 3.2:-78093314 | MS.gene057251:CDS |
| TTGTTACGGTTCGGGTTGTG+GGG | 0.561686 | 3.2:-78093202 | MS.gene057251:CDS |
| CTTCAGATTCCTTCGCCACG+TGG | 0.561700 | 3.2:-78093328 | MS.gene057251:CDS |
| TACAGTGGAGGGTTTGCCGG+AGG | 0.567653 | 3.2:-78092898 | MS.gene057251:CDS |
| TCGCATCAGGAATTGTCTGA+TGG | 0.568083 | 3.2:-78093155 | MS.gene057251:CDS |
| ACAGTGGAGGGTTTGCCGGA+GGG | 0.574179 | 3.2:-78092897 | MS.gene057251:CDS |
| GGAGGTGAAGAGAAAGCAAA+CGG | 0.575014 | 3.2:+78093559 | None:intergenic |
| TTTAACACCCCACGTGGCGA+AGG | 0.576239 | 3.2:+78093319 | None:intergenic |
| GATATGTTGTTAGACATGGC+GGG | 0.577331 | 3.2:+78093455 | None:intergenic |
| AGCCATTCAGAGAGAGATTG+CGG | 0.577556 | 3.2:+78093365 | None:intergenic |
| ACCTGAACGGTTCGAACAGG+AGG | 0.581834 | 3.2:+78093224 | None:intergenic |
| GTAAAAGATCAGGTAAGGAA+GGG | 0.586335 | 3.2:+78093594 | None:intergenic |
| ATATGTTGTTAGACATGGCG+GGG | 0.587205 | 3.2:+78093456 | None:intergenic |
| TTTAGAGGGAAAGAGAGGAA+AGG | 0.589144 | 3.2:+78093500 | None:intergenic |
| ACATAACAACCAGGCAAACC+AGG | 0.592229 | 3.2:+78092939 | None:intergenic |
| TCAGATTCCTTCGCCACGTG+GGG | 0.592708 | 3.2:-78093326 | MS.gene057251:CDS |
| GAAAGATGGTAAAATCCTTG+TGG | 0.594600 | 3.2:-78093180 | MS.gene057251:CDS |
| CTCTGGCTTGAACTTTCTCA+GGG | 0.599215 | 3.2:-78093272 | MS.gene057251:CDS |
| GGAGAAGATGAAGCCGAATG+AGG | 0.599580 | 3.2:-78093102 | MS.gene057251:CDS |
| AGATTTGTTAGTGGTTGTAA+CGG | 0.607019 | 3.2:+78093629 | None:intergenic |
| TGTTAGTGGTTGTAACGGTG+GGG | 0.608791 | 3.2:+78093634 | None:intergenic |
| ATTCCTGATGCGATTCCACA+AGG | 0.611132 | 3.2:+78093165 | None:intergenic |
| ATTGTCTGATGGAAAAGTGA+GGG | 0.614443 | 3.2:-78093144 | MS.gene057251:CDS |
| GCGGCGATGCGAAATTGCGA+CGG | 0.630824 | 3.2:+78093384 | None:intergenic |
| GGTAGATATGTTGTTAGACA+TGG | 0.631652 | 3.2:+78093451 | None:intergenic |
| GGTGTTGTGAGATCTTGAGG+AGG | 0.632594 | 3.2:+78093541 | None:intergenic |
| AGATATGTTGTTAGACATGG+CGG | 0.633253 | 3.2:+78093454 | None:intergenic |
| AATTGTCTGATGGAAAAGTG+AGG | 0.656857 | 3.2:-78093145 | MS.gene057251:CDS |
| AGGTTCAGAATCATCAAGCG+AGG | 0.657763 | 3.2:+78093244 | None:intergenic |
| GCTTGGGTCTGTGGTTAACG+GGG | 0.660661 | 3.2:-78093042 | MS.gene057251:CDS |
| CCGAACCGTAACAACCTGAA+CGG | 0.668287 | 3.2:+78093211 | None:intergenic |
| TTCGTATGAGATGAGAGTGG+AGG | 0.674678 | 3.2:-78092982 | MS.gene057251:CDS |
| TGAAGATGATGATAATGATG+AGG | 0.678913 | 3.2:+78093430 | None:intergenic |
| TCCCGGTTTAACACCCCACG+TGG | 0.692416 | 3.2:+78093313 | None:intergenic |
| GAATTCGTATGAGATGAGAG+TGG | 0.699092 | 3.2:-78092985 | MS.gene057251:CDS |
| ATATGCAAAACATAACAACC+AGG | 0.704010 | 3.2:+78092930 | None:intergenic |
| CACGTGGCGAAGGAATCTGA+AGG | 0.726526 | 3.2:+78093329 | None:intergenic |
| AAGGAATCTGAAGGTAAACG+AGG | 0.750658 | 3.2:+78093338 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGAAACATTTTTGGAAAT+GGG | - | chr3.2:78093612-78093631 | MS.gene057251:CDS | 20.0% |
| !!! | TTAAGAAACATTTTTGGAAA+TGG | - | chr3.2:78093611-78093630 | MS.gene057251:CDS | 20.0% |
| !!! | TTTCTGTTAAGAAACATTTT+TGG | - | chr3.2:78093605-78093624 | MS.gene057251:CDS | 20.0% |
| AGTTAGTAAAAGATCAGGTA+AGG | + | chr3.2:78092825-78092844 | None:intergenic | 30.0% | |
| ATATGCAAAACATAACAACC+AGG | + | chr3.2:78093484-78093503 | None:intergenic | 30.0% | |
| ! | TGAAGATGATGATAATGATG+AGG | + | chr3.2:78092984-78093003 | None:intergenic | 30.0% |
| !! | AGATTTGTTAGTGGTTGTAA+CGG | + | chr3.2:78092785-78092804 | None:intergenic | 30.0% |
| !! | TTGAGATTGAGATTTGTTAG+TGG | + | chr3.2:78092794-78092813 | None:intergenic | 30.0% |
| AATTGTCTGATGGAAAAGTG+AGG | - | chr3.2:78093266-78093285 | MS.gene057251:CDS | 35.0% | |
| ACTCTCATCTCATACGAATT+CGG | + | chr3.2:78093427-78093446 | None:intergenic | 35.0% | |
| AGATATGTTGTTAGACATGG+CGG | + | chr3.2:78092960-78092979 | None:intergenic | 35.0% | |
| AGTAAAAGATCAGGTAAGGA+AGG | + | chr3.2:78092821-78092840 | None:intergenic | 35.0% | |
| AGTGCAGTTAGTAAAAGATC+AGG | + | chr3.2:78092830-78092849 | None:intergenic | 35.0% | |
| ATTGTCTGATGGAAAAGTGA+GGG | - | chr3.2:78093267-78093286 | MS.gene057251:CDS | 35.0% | |
| CTAAGAACGTTCATAATCTC+TGG | - | chr3.2:78093122-78093141 | MS.gene057251:CDS | 35.0% | |
| GAAAGATGGTAAAATCCTTG+TGG | - | chr3.2:78093231-78093250 | MS.gene057251:CDS | 35.0% | |
| GGTAGATATGTTGTTAGACA+TGG | + | chr3.2:78092963-78092982 | None:intergenic | 35.0% | |
| GTAAAAGATCAGGTAAGGAA+GGG | + | chr3.2:78092820-78092839 | None:intergenic | 35.0% | |
| TGATAAGAAAGTTGCACATC+AGG | - | chr3.2:78093579-78093598 | MS.gene057251:CDS | 35.0% | |
| TTATGAACGTTCTTAGTTCC+CGG | + | chr3.2:78093118-78093137 | None:intergenic | 35.0% | |
| ! | ATTTTGAATGCTACAGTGGA+GGG | - | chr3.2:78093502-78093521 | MS.gene057251:CDS | 35.0% |
| !! | AAAGGACAGTTTGTTGTTGT+GGG | + | chr3.2:78092896-78092915 | None:intergenic | 35.0% |
| !! | GCATATTTTGAATGCTACAG+TGG | - | chr3.2:78093498-78093517 | MS.gene057251:CDS | 35.0% |
| !! | GTTATTTCTGTTAGGGTTTG+AGG | + | chr3.2:78093008-78093027 | None:intergenic | 35.0% |
| !! | TATTTTGAATGCTACAGTGG+AGG | - | chr3.2:78093501-78093520 | MS.gene057251:CDS | 35.0% |
| AAGGAATCTGAAGGTAAACG+AGG | + | chr3.2:78093076-78093095 | None:intergenic | 40.0% | |
| ATATGTTGTTAGACATGGCG+GGG | + | chr3.2:78092958-78092977 | None:intergenic | 40.0% | |
| GAATTCGTATGAGATGAGAG+TGG | - | chr3.2:78093426-78093445 | MS.gene057251:CDS | 40.0% | |
| GATATGTTGTTAGACATGGC+GGG | + | chr3.2:78092959-78092978 | None:intergenic | 40.0% | |
| TTGTTAGTGGTTGTAACGGT+GGG | + | chr3.2:78092781-78092800 | None:intergenic | 40.0% | |
| TTTAGAGGGAAAGAGAGGAA+AGG | + | chr3.2:78092914-78092933 | None:intergenic | 40.0% | |
| TTTGTTAGTGGTTGTAACGG+TGG | + | chr3.2:78092782-78092801 | None:intergenic | 40.0% | |
| ! | TGATTTTTGCACGTATGAGG+TGG | - | chr3.2:78093537-78093556 | MS.gene057251:CDS | 40.0% |
| !! | AAGGACAGTTTGTTGTTGTG+GGG | + | chr3.2:78092895-78092914 | None:intergenic | 40.0% |
| !! | GAAAGGACAGTTTGTTGTTG+TGG | + | chr3.2:78092897-78092916 | None:intergenic | 40.0% |
| !! | TGCGACGGTTATTTCTGTTA+GGG | + | chr3.2:78093015-78093034 | None:intergenic | 40.0% |
| !! | TTGCGACGGTTATTTCTGTT+AGG | + | chr3.2:78093016-78093035 | None:intergenic | 40.0% |
| AATCCTTGTGGAATCGCATC+AGG | - | chr3.2:78093243-78093262 | MS.gene057251:CDS | 45.0% | |
| ACATAACAACCAGGCAAACC+AGG | + | chr3.2:78093475-78093494 | None:intergenic | 45.0% | |
| AGAGGGATTAAGGAAGAGCT+TGG | - | chr3.2:78093352-78093371 | MS.gene057251:CDS | 45.0% | |
| AGCCATTCAGAGAGAGATTG+CGG | + | chr3.2:78093049-78093068 | None:intergenic | 45.0% | |
| AGGTTCAGAATCATCAAGCG+AGG | + | chr3.2:78093170-78093189 | None:intergenic | 45.0% | |
| ATTCCTGATGCGATTCCACA+AGG | + | chr3.2:78093249-78093268 | None:intergenic | 45.0% | |
| GAGGGATTAAGGAAGAGCTT+GGG | - | chr3.2:78093353-78093372 | MS.gene057251:CDS | 45.0% | |
| GGAGGTGAAGAGAAAGCAAA+CGG | + | chr3.2:78092855-78092874 | None:intergenic | 45.0% | |
| TACGTGCAAAAATCACCCTC+CGG | + | chr3.2:78093532-78093551 | None:intergenic | 45.0% | |
| TCGCATCAGGAATTGTCTGA+TGG | - | chr3.2:78093256-78093275 | MS.gene057251:CDS | 45.0% | |
| TGATGGAAAAGTGAGGGAGA+GGG | - | chr3.2:78093273-78093292 | MS.gene057251:CDS | 45.0% | |
| TGCTGCTGTTAGAGGGATTA+AGG | - | chr3.2:78093342-78093361 | MS.gene057251:CDS | 45.0% | |
| TGTTAGTGGTTGTAACGGTG+GGG | + | chr3.2:78092780-78092799 | None:intergenic | 45.0% | |
| TTCGTATGAGATGAGAGTGG+AGG | - | chr3.2:78093429-78093448 | MS.gene057251:CDS | 45.0% | |
| ! | AGGAATTCAGGGTCTTATCC+TGG | - | chr3.2:78093454-78093473 | MS.gene057251:CDS | 45.0% |
| ! | CTCTGGCTTGAACTTTCTCA+GGG | - | chr3.2:78093139-78093158 | MS.gene057251:CDS | 45.0% |
| ! | GGGTGATTTTTGCACGTATG+AGG | - | chr3.2:78093534-78093553 | MS.gene057251:CDS | 45.0% |
| ! | TCTCTGGCTTGAACTTTCTC+AGG | - | chr3.2:78093138-78093157 | MS.gene057251:CDS | 45.0% |
| !! | AGGACAGTTTGTTGTTGTGG+GGG | + | chr3.2:78092894-78092913 | None:intergenic | 45.0% |
| !! | TCGAACCGTTCAGGTTGTTA+CGG | - | chr3.2:78093195-78093214 | MS.gene057251:CDS | 45.0% |
| !!! | AGGAAACGACGTGGTTTTAG+AGG | + | chr3.2:78092929-78092948 | None:intergenic | 45.0% |
| !!! | GGAAACGACGTGGTTTTAGA+GGG | + | chr3.2:78092928-78092947 | None:intergenic | 45.0% |
| !!! | GTGGTTTTAGAGGGAAAGAG+AGG | + | chr3.2:78092919-78092938 | None:intergenic | 45.0% |
| ACAACCTGAACGGTTCGAAC+AGG | + | chr3.2:78093193-78093212 | None:intergenic | 50.0% | |
| AGAGTGGAGGAGAGGAATTC+AGG | - | chr3.2:78093442-78093461 | MS.gene057251:CDS | 50.0% | |
| AGCTTGGGTCTGTGGTTAAC+GGG | - | chr3.2:78093368-78093387 | MS.gene057251:CDS | 50.0% | |
| ATGAGATGAGAGTGGAGGAG+AGG | - | chr3.2:78093434-78093453 | MS.gene057251:CDS | 50.0% | |
| CCGAACCGTAACAACCTGAA+CGG | + | chr3.2:78093203-78093222 | None:intergenic | 50.0% | |
| CCTCTAACAGCAGCAGATTC+CGG | + | chr3.2:78093337-78093356 | None:intergenic | 50.0% | |
| CGGAATCTGCTGCTGTTAGA+GGG | - | chr3.2:78093335-78093354 | MS.gene057251:CDS | 50.0% | |
| CTCTAACAGCAGCAGATTCC+GGG | + | chr3.2:78093336-78093355 | None:intergenic | 50.0% | |
| CTGATGGAAAAGTGAGGGAG+AGG | - | chr3.2:78093272-78093291 | MS.gene057251:CDS | 50.0% | |
| GAGCTTGGGTCTGTGGTTAA+CGG | - | chr3.2:78093367-78093386 | MS.gene057251:CDS | 50.0% | |
| GAGTGGAGGAGAGGAATTCA+GGG | - | chr3.2:78093443-78093462 | MS.gene057251:CDS | 50.0% | |
| GATGGAAAAGTGAGGGAGAG+GGG | - | chr3.2:78093274-78093293 | MS.gene057251:CDS | 50.0% | |
| GGAGAAGATGAAGCCGAATG+AGG | - | chr3.2:78093309-78093328 | MS.gene057251:CDS | 50.0% | |
| GGCTTCATCTTCTCCGACAA+CGG | + | chr3.2:78093304-78093323 | None:intergenic | 50.0% | |
| GTCTGTGGTTAACGGGGAAA+CGG | - | chr3.2:78093375-78093394 | MS.gene057251:CDS | 50.0% | |
| TAAGGAAGAGCTTGGGTCTG+TGG | - | chr3.2:78093360-78093379 | MS.gene057251:CDS | 50.0% | |
| TTCAGATTCCTTCGCCACGT+GGG | - | chr3.2:78093084-78093103 | MS.gene057251:CDS | 50.0% | |
| ! | GGTGTTGTGAGATCTTGAGG+AGG | + | chr3.2:78092873-78092892 | None:intergenic | 50.0% |
| !! | CCGTTCAGGTTGTTACGGTT+CGG | - | chr3.2:78093200-78093219 | MS.gene057251:CDS | 50.0% |
| !! | CGTTCAGGTTGTTACGGTTC+GGG | - | chr3.2:78093201-78093220 | MS.gene057251:CDS | 50.0% |
| !! | GGGATTTTGAGGAAACGACG+TGG | + | chr3.2:78092938-78092957 | None:intergenic | 50.0% |
| !! | GTTGTTACGGTTCGGGTTGT+GGG | - | chr3.2:78093208-78093227 | MS.gene057251:CDS | 50.0% |
| !! | TAGACATGGCGGGGATTTTG+AGG | + | chr3.2:78092949-78092968 | None:intergenic | 50.0% |
| !! | TTGTTACGGTTCGGGTTGTG+GGG | - | chr3.2:78093209-78093228 | MS.gene057251:CDS | 50.0% |
| ACCTCCTGTTCGAACCGTTC+AGG | - | chr3.2:78093186-78093205 | MS.gene057251:CDS | 55.0% | |
| ACCTGAACGGTTCGAACAGG+AGG | + | chr3.2:78093190-78093209 | None:intergenic | 55.0% | |
| CACGTGGCGAAGGAATCTGA+AGG | + | chr3.2:78093085-78093104 | None:intergenic | 55.0% | |
| CCGGAATCTGCTGCTGTTAG+AGG | - | chr3.2:78093334-78093353 | MS.gene057251:CDS | 55.0% | |
| CGCCGCAATCTCTCTCTGAA+TGG | - | chr3.2:78093044-78093063 | MS.gene057251:CDS | 55.0% | |
| CTTCAGATTCCTTCGCCACG+TGG | - | chr3.2:78093083-78093102 | MS.gene057251:CDS | 55.0% | |
| GAAAAGTGAGGGAGAGGGGT+AGG | - | chr3.2:78093278-78093297 | MS.gene057251:CDS | 55.0% | |
| GATGAAGCCGAATGAGGACC+CGG | - | chr3.2:78093315-78093334 | MS.gene057251:CDS | 55.0% | |
| GCAGATTCCGGGTCCTCATT+CGG | + | chr3.2:78093325-78093344 | None:intergenic | 55.0% | |
| GCTTGGGTCTGTGGTTAACG+GGG | - | chr3.2:78093369-78093388 | MS.gene057251:CDS | 55.0% | |
| TCAGATTCCTTCGCCACGTG+GGG | - | chr3.2:78093085-78093104 | MS.gene057251:CDS | 55.0% | |
| TGCTACAGTGGAGGGTTTGC+CGG | - | chr3.2:78093510-78093529 | MS.gene057251:CDS | 55.0% | |
| TTTAACACCCCACGTGGCGA+AGG | + | chr3.2:78093095-78093114 | None:intergenic | 55.0% | |
| ! | GGGTCTTATCCTGGTTTGCC+TGG | - | chr3.2:78093463-78093482 | MS.gene057251:CDS | 55.0% |
| !! | GGGGGTGTTGTGAGATCTTG+AGG | + | chr3.2:78092876-78092895 | None:intergenic | 55.0% |
| !! | GGTTGTTACGGTTCGGGTTG+TGG | - | chr3.2:78093207-78093226 | MS.gene057251:CDS | 55.0% |
| !! | GTTCGGGTTGTGGGGAAAGA+TGG | - | chr3.2:78093217-78093236 | MS.gene057251:CDS | 55.0% |
| ACAGTGGAGGGTTTGCCGGA+GGG | - | chr3.2:78093514-78093533 | MS.gene057251:CDS | 60.0% | |
| GCGGCGATGCGAAATTGCGA+CGG | + | chr3.2:78093030-78093049 | None:intergenic | 60.0% | |
| TACAGTGGAGGGTTTGCCGG+AGG | - | chr3.2:78093513-78093532 | MS.gene057251:CDS | 60.0% | |
| TCCCGGTTTAACACCCCACG+TGG | + | chr3.2:78093101-78093120 | None:intergenic | 60.0% | |
| ! | CGCCACGTGGGGTGTTAAAC+CGG | - | chr3.2:78093096-78093115 | MS.gene057251:CDS | 60.0% |
| ! | GCCACGTGGGGTGTTAAACC+GGG | - | chr3.2:78093097-78093116 | MS.gene057251:CDS | 60.0% |
| GGAGAGGGGTAGGCCGTTGT+CGG | - | chr3.2:78093288-78093307 | MS.gene057251:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 78092773 | 78093660 | 78092773 | ID=MS.gene057251 |
| chr3.2 | mRNA | 78092773 | 78093660 | 78092773 | ID=MS.gene057251.t1;Parent=MS.gene057251 |
| chr3.2 | exon | 78092773 | 78093660 | 78092773 | ID=MS.gene057251.t1.exon1;Parent=MS.gene057251.t1 |
| chr3.2 | CDS | 78092773 | 78093660 | 78092773 | ID=cds.MS.gene057251.t1;Parent=MS.gene057251.t1 |
| Gene Sequence |
| Protein sequence |
