Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06603.t1 | XP_003602390.1 | 96.9 | 295 | 7 | 1 | 1 | 295 | 1 | 293 | 1.10E-149 | 539.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06603.t1 | G7J908 | 96.9 | 295 | 7 | 1 | 1 | 295 | 1 | 293 | 8.2e-150 | 539.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050323 | MS.gene06603 | 0.835162 | 1.97E-56 | -1.69E-46 |
| MS.gene050868 | MS.gene06603 | 0.805692 | 1.18E-49 | -1.69E-46 |
| MS.gene050871 | MS.gene06603 | 0.807386 | 5.18E-50 | -1.69E-46 |
| MS.gene056618 | MS.gene06603 | -0.812696 | 3.72E-51 | -1.69E-46 |
| MS.gene057251 | MS.gene06603 | 0.8333 | 5.77E-56 | -1.69E-46 |
| MS.gene059699 | MS.gene06603 | -0.828313 | 9.63E-55 | -1.69E-46 |
| MS.gene059703 | MS.gene06603 | -0.836913 | 7.08E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06603.t1 | MTR_3g092810 | 97.288 | 295 | 6 | 1 | 1 | 295 | 1 | 293 | 0.0 | 584 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06603.t1 | AT5G24460 | 55.949 | 311 | 102 | 9 | 2 | 294 | 6 | 299 | 2.27e-95 | 283 |
Find 90 sgRNAs with CRISPR-Local
Find 105 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGTGGAGGAGAGGAATTC+AGG | 0.229370 | 3.3:-77471115 | MS.gene06603:CDS |
| CCTCTAACAGCAGCAGATTC+TGG | 0.246844 | 3.3:+77471223 | None:intergenic |
| CCAGAATCTGCTGCTGTTAG+AGG | 0.294356 | 3.3:-77471223 | MS.gene06603:CDS |
| GGTTGTTACGGTTCGGGTTG+TGG | 0.301094 | 3.3:-77471350 | MS.gene06603:CDS |
| TGCTGCTGTTAGAGGGATTA+AGG | 0.305461 | 3.3:-77471215 | MS.gene06603:CDS |
| CGCCACGTGGGGTGTTAAAC+CGG | 0.312074 | 3.3:-77471461 | MS.gene06603:CDS |
| GTTGTTACGGTTCGGGTTGT+GGG | 0.317057 | 3.3:-77471349 | MS.gene06603:CDS |
| CGTTCAGGTTGTTACGGTTC+GGG | 0.323431 | 3.3:-77471356 | MS.gene06603:CDS |
| ACCTCCTGTTCGAACCGTTC+AGG | 0.336327 | 3.3:-77471371 | MS.gene06603:CDS |
| CCGTTCAGGTTGTTACGGTT+CGG | 0.359505 | 3.3:-77471357 | MS.gene06603:CDS |
| TTGCGACGGTTATTTCTGTT+AGG | 0.364535 | 3.3:+77471544 | None:intergenic |
| GTTATTTCTGTTAGGGTTTG+AGG | 0.370357 | 3.3:+77471552 | None:intergenic |
| TCTCTGGCTTGAACTTTCTC+AGG | 0.375795 | 3.3:-77471419 | MS.gene06603:CDS |
| TTATGAACGTTCTTAGTTCC+CGG | 0.375830 | 3.3:+77471442 | None:intergenic |
| AGCTTGGGTCTGTGATTAAC+GGG | 0.384878 | 3.3:-77471189 | MS.gene06603:CDS |
| GGGTCTTATCCTGGTTTACC+TGG | 0.403587 | 3.3:-77471094 | MS.gene06603:CDS |
| ACTCTCATCTCATACGAATT+CGG | 0.415365 | 3.3:+77471133 | None:intergenic |
| AAAGGACAGTTTGTTGTTGT+GGG | 0.416143 | 3.3:+77471664 | None:intergenic |
| AGTAAAAGATCTGGTAAGGA+AGG | 0.423707 | 3.3:+77471739 | None:intergenic |
| ACAACCTGAACGGTTCGAAC+AGG | 0.440068 | 3.3:+77471367 | None:intergenic |
| GAGTGGAGGAGAGGAATTCA+GGG | 0.441498 | 3.3:-77471114 | MS.gene06603:CDS |
| AATCCTTGTGGAATCGCATC+AGG | 0.445603 | 3.3:-77471314 | MS.gene06603:CDS |
| GGAGAGGGGTAGGCCGTTGT+CGG | 0.448380 | 3.3:-77471269 | MS.gene06603:CDS |
| GAGCTTGGGTCTGTGATTAA+CGG | 0.452338 | 3.3:-77471190 | MS.gene06603:CDS |
| CTAAGAACGTTCATAATCTC+TGG | 0.452904 | 3.3:-77471435 | MS.gene06603:CDS |
| GCAGATTCTGGATCCTCATT+CGG | 0.453414 | 3.3:+77471235 | None:intergenic |
| TGCGACGGTTATTTCTGTTA+GGG | 0.460191 | 3.3:+77471545 | None:intergenic |
| TTGAGATTGAGATTTGTTAG+TGG | 0.463013 | 3.3:+77471766 | None:intergenic |
| AGGAATTCAGGGTCTTATCC+TGG | 0.469785 | 3.3:-77471103 | MS.gene06603:CDS |
| AGGACAGTTTGTTGTTGTGG+GGG | 0.472828 | 3.3:+77471666 | None:intergenic |
| ATCATACTCATCCACCTCAT+AGG | 0.482836 | 3.3:+77471009 | None:intergenic |
| GAAAGGACAGTTTGTTGTTG+TGG | 0.483133 | 3.3:+77471663 | None:intergenic |
| GTTCGGGTTGTGGGGAAAGA+TGG | 0.484452 | 3.3:-77471340 | MS.gene06603:CDS |
| CGCCGCAATCTCTCTCTGAA+TGG | 0.485327 | 3.3:-77471513 | MS.gene06603:CDS |
| AGAGGGATTAAGGAAGAGCT+TGG | 0.490718 | 3.3:-77471205 | MS.gene06603:CDS |
| TCGAACCGTTCAGGTTGTTA+CGG | 0.497469 | 3.3:-77471362 | MS.gene06603:CDS |
| GATGGAAAAGTGAGGGAGAG+GGG | 0.500090 | 3.3:-77471283 | MS.gene06603:CDS |
| CTGATGGAAAAGTGAGGGAG+AGG | 0.501444 | 3.3:-77471285 | MS.gene06603:CDS |
| ATGTGCAACTTTCTTATCAT+CGG | 0.501797 | 3.3:+77470982 | None:intergenic |
| TTGTTAGTGGTTGTAACGGC+GGG | 0.504022 | 3.3:+77471779 | None:intergenic |
| AGTGCAGTTAGTAAAAGATC+TGG | 0.520470 | 3.3:+77471730 | None:intergenic |
| GGCTTCATCTTCTCCGACAA+CGG | 0.523703 | 3.3:+77471256 | None:intergenic |
| GAGGGATTAAGGAAGAGCTT+GGG | 0.532159 | 3.3:-77471204 | MS.gene06603:CDS |
| GAAAAGTGAGGGAGAGGGGT+AGG | 0.532588 | 3.3:-77471279 | MS.gene06603:CDS |
| AAGGACAGTTTGTTGTTGTG+GGG | 0.546084 | 3.3:+77471665 | None:intergenic |
| ATGAGATGAGAGTGGAGGAG+AGG | 0.547545 | 3.3:-77471123 | MS.gene06603:CDS |
| AGTTAGTAAAAGATCTGGTA+AGG | 0.548851 | 3.3:+77471735 | None:intergenic |
| TGATGGAAAAGTGAGGGAGA+GGG | 0.557496 | 3.3:-77471284 | MS.gene06603:CDS |
| TTCAGATTCCTTCGCCACGT+GGG | 0.557872 | 3.3:-77471473 | MS.gene06603:CDS |
| GCCACGTGGGGTGTTAAACC+GGG | 0.559559 | 3.3:-77471460 | MS.gene06603:CDS |
| CAGAATCTGCTGCTGTTAGA+GGG | 0.559723 | 3.3:-77471222 | MS.gene06603:CDS |
| AGATTTGTTAGTGGTTGTAA+CGG | 0.560847 | 3.3:+77471775 | None:intergenic |
| TTGTTACGGTTCGGGTTGTG+GGG | 0.561686 | 3.3:-77471348 | MS.gene06603:CDS |
| CTTCAGATTCCTTCGCCACG+TGG | 0.561700 | 3.3:-77471474 | MS.gene06603:CDS |
| TCGCATCAGGAATTGTCTGA+TGG | 0.568083 | 3.3:-77471301 | MS.gene06603:CDS |
| GGAGGTGAAGAGAAAGCAAA+CGG | 0.575014 | 3.3:+77471705 | None:intergenic |
| TTTAACACCCCACGTGGCGA+AGG | 0.576239 | 3.3:+77471465 | None:intergenic |
| GATATGTTGTTAGACATGGC+GGG | 0.577331 | 3.3:+77471601 | None:intergenic |
| AGCCATTCAGAGAGAGATTG+CGG | 0.577556 | 3.3:+77471511 | None:intergenic |
| ACCTGAACGGTTCGAACAGG+AGG | 0.581834 | 3.3:+77471370 | None:intergenic |
| TGATAAGAAAGTTGCACATG+AGG | 0.585972 | 3.3:-77470978 | MS.gene06603:CDS |
| ATATGTTGTTAGACATGGCG+GGG | 0.587205 | 3.3:+77471602 | None:intergenic |
| TTTAGAGGGAAAGAGAGGAA+AGG | 0.589144 | 3.3:+77471646 | None:intergenic |
| TCAGATTCCTTCGCCACGTG+GGG | 0.592708 | 3.3:-77471472 | MS.gene06603:CDS |
| TACAGTGGAGGGTTTGCCAG+TGG | 0.593941 | 3.3:-77471044 | MS.gene06603:CDS |
| GAAAGATGGTAAAATCCTTG+TGG | 0.594600 | 3.3:-77471326 | MS.gene06603:CDS |
| CTCTGGCTTGAACTTTCTCA+GGG | 0.599215 | 3.3:-77471418 | MS.gene06603:CDS |
| GGAGAAGATGAAGCCGAATG+AGG | 0.599580 | 3.3:-77471248 | MS.gene06603:CDS |
| ACAGTGGAGGGTTTGCCAGT+GGG | 0.601407 | 3.3:-77471043 | MS.gene06603:CDS |
| ATATAACAACCAGGTAAACC+AGG | 0.604147 | 3.3:+77471085 | None:intergenic |
| GTAAAAGATCTGGTAAGGAA+GGG | 0.605594 | 3.3:+77471740 | None:intergenic |
| ATTCCTGATGCGATTCCACA+AGG | 0.611132 | 3.3:+77471311 | None:intergenic |
| ATTGTCTGATGGAAAAGTGA+GGG | 0.614443 | 3.3:-77471290 | MS.gene06603:CDS |
| GCGGCGATGCGAAATTGCGA+CGG | 0.630824 | 3.3:+77471530 | None:intergenic |
| GGTAGATATGTTGTTAGACA+TGG | 0.631652 | 3.3:+77471597 | None:intergenic |
| GGTGTTGTGAGATCTTGAGG+AGG | 0.632594 | 3.3:+77471687 | None:intergenic |
| AGATATGTTGTTAGACATGG+CGG | 0.633253 | 3.3:+77471600 | None:intergenic |
| AATTGTCTGATGGAAAAGTG+AGG | 0.656857 | 3.3:-77471291 | MS.gene06603:CDS |
| AGGTTCAGAATCATCAAGCG+AGG | 0.657763 | 3.3:+77471390 | None:intergenic |
| TTTGTTAGTGGTTGTAACGG+CGG | 0.659170 | 3.3:+77471778 | None:intergenic |
| TGTTAGTGGTTGTAACGGCG+GGG | 0.660100 | 3.3:+77471780 | None:intergenic |
| CCGAACCGTAACAACCTGAA+CGG | 0.668287 | 3.3:+77471357 | None:intergenic |
| TTCGTATGAGATGAGAGTGG+AGG | 0.674678 | 3.3:-77471128 | MS.gene06603:CDS |
| TGAAGATGATGATAATGATG+AGG | 0.678913 | 3.3:+77471576 | None:intergenic |
| ATATGCAAAATATAACAACC+AGG | 0.686572 | 3.3:+77471076 | None:intergenic |
| TCCCGGTTTAACACCCCACG+TGG | 0.692416 | 3.3:+77471459 | None:intergenic |
| GAATTCGTATGAGATGAGAG+TGG | 0.699092 | 3.3:-77471131 | MS.gene06603:CDS |
| CACGTGGCGAAGGAATCTGA+AGG | 0.726526 | 3.3:+77471475 | None:intergenic |
| GCTTGGGTCTGTGATTAACG+GGG | 0.744662 | 3.3:-77471188 | MS.gene06603:CDS |
| AAGGAATCTGAAGGTAAACG+AGG | 0.750658 | 3.3:+77471484 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGAAACATTTTTGGAAAT+GGG | - | chr3.3:77471758-77471777 | MS.gene06603:CDS | 20.0% |
| !!! | TTAAGAAACATTTTTGGAAA+TGG | - | chr3.3:77471757-77471776 | MS.gene06603:CDS | 20.0% |
| !!! | TTTCTGTTAAGAAACATTTT+TGG | - | chr3.3:77471751-77471770 | MS.gene06603:CDS | 20.0% |
| ! | ATATGCAAAATATAACAACC+AGG | + | chr3.3:77471630-77471649 | None:intergenic | 25.0% |
| AGTTAGTAAAAGATCTGGTA+AGG | + | chr3.3:77470971-77470990 | None:intergenic | 30.0% | |
| ATGTGCAACTTTCTTATCAT+CGG | + | chr3.3:77471724-77471743 | None:intergenic | 30.0% | |
| ! | TGAAGATGATGATAATGATG+AGG | + | chr3.3:77471130-77471149 | None:intergenic | 30.0% |
| !! | AGATTTGTTAGTGGTTGTAA+CGG | + | chr3.3:77470931-77470950 | None:intergenic | 30.0% |
| !! | TTGAGATTGAGATTTGTTAG+TGG | + | chr3.3:77470940-77470959 | None:intergenic | 30.0% |
| AATTGTCTGATGGAAAAGTG+AGG | - | chr3.3:77471412-77471431 | MS.gene06603:CDS | 35.0% | |
| ACTCTCATCTCATACGAATT+CGG | + | chr3.3:77471573-77471592 | None:intergenic | 35.0% | |
| AGATATGTTGTTAGACATGG+CGG | + | chr3.3:77471106-77471125 | None:intergenic | 35.0% | |
| AGTAAAAGATCTGGTAAGGA+AGG | + | chr3.3:77470967-77470986 | None:intergenic | 35.0% | |
| AGTGCAGTTAGTAAAAGATC+TGG | + | chr3.3:77470976-77470995 | None:intergenic | 35.0% | |
| ATATAACAACCAGGTAAACC+AGG | + | chr3.3:77471621-77471640 | None:intergenic | 35.0% | |
| ATTGTCTGATGGAAAAGTGA+GGG | - | chr3.3:77471413-77471432 | MS.gene06603:CDS | 35.0% | |
| CTAAGAACGTTCATAATCTC+TGG | - | chr3.3:77471268-77471287 | MS.gene06603:CDS | 35.0% | |
| GAAAGATGGTAAAATCCTTG+TGG | - | chr3.3:77471377-77471396 | MS.gene06603:CDS | 35.0% | |
| GGTAGATATGTTGTTAGACA+TGG | + | chr3.3:77471109-77471128 | None:intergenic | 35.0% | |
| GTAAAAGATCTGGTAAGGAA+GGG | + | chr3.3:77470966-77470985 | None:intergenic | 35.0% | |
| TGATAAGAAAGTTGCACATG+AGG | - | chr3.3:77471725-77471744 | MS.gene06603:CDS | 35.0% | |
| TTATGAACGTTCTTAGTTCC+CGG | + | chr3.3:77471264-77471283 | None:intergenic | 35.0% | |
| ! | ATTTTGAATGCTACAGTGGA+GGG | - | chr3.3:77471648-77471667 | MS.gene06603:CDS | 35.0% |
| ! | TGATTTTTGTACCTATGAGG+TGG | - | chr3.3:77471683-77471702 | MS.gene06603:CDS | 35.0% |
| !! | AAAGGACAGTTTGTTGTTGT+GGG | + | chr3.3:77471042-77471061 | None:intergenic | 35.0% |
| !! | GCATATTTTGAATGCTACAG+TGG | - | chr3.3:77471644-77471663 | MS.gene06603:CDS | 35.0% |
| !! | GTTATTTCTGTTAGGGTTTG+AGG | + | chr3.3:77471154-77471173 | None:intergenic | 35.0% |
| !! | TATTTTGAATGCTACAGTGG+AGG | - | chr3.3:77471647-77471666 | MS.gene06603:CDS | 35.0% |
| AAGGAATCTGAAGGTAAACG+AGG | + | chr3.3:77471222-77471241 | None:intergenic | 40.0% | |
| ATATGTTGTTAGACATGGCG+GGG | + | chr3.3:77471104-77471123 | None:intergenic | 40.0% | |
| ATCATACTCATCCACCTCAT+AGG | + | chr3.3:77471697-77471716 | None:intergenic | 40.0% | |
| GAATTCGTATGAGATGAGAG+TGG | - | chr3.3:77471572-77471591 | MS.gene06603:CDS | 40.0% | |
| GATATGTTGTTAGACATGGC+GGG | + | chr3.3:77471105-77471124 | None:intergenic | 40.0% | |
| TAGGTACAAAAATCACCCAC+TGG | + | chr3.3:77471678-77471697 | None:intergenic | 40.0% | |
| TTTAGAGGGAAAGAGAGGAA+AGG | + | chr3.3:77471060-77471079 | None:intergenic | 40.0% | |
| TTTGTTAGTGGTTGTAACGG+CGG | + | chr3.3:77470928-77470947 | None:intergenic | 40.0% | |
| ! | GGGTGATTTTTGTACCTATG+AGG | - | chr3.3:77471680-77471699 | MS.gene06603:CDS | 40.0% |
| !! | AAGGACAGTTTGTTGTTGTG+GGG | + | chr3.3:77471041-77471060 | None:intergenic | 40.0% |
| !! | GAAAGGACAGTTTGTTGTTG+TGG | + | chr3.3:77471043-77471062 | None:intergenic | 40.0% |
| !! | TGCGACGGTTATTTCTGTTA+GGG | + | chr3.3:77471161-77471180 | None:intergenic | 40.0% |
| !! | TTGCGACGGTTATTTCTGTT+AGG | + | chr3.3:77471162-77471181 | None:intergenic | 40.0% |
| AATCCTTGTGGAATCGCATC+AGG | - | chr3.3:77471389-77471408 | MS.gene06603:CDS | 45.0% | |
| AGAGGGATTAAGGAAGAGCT+TGG | - | chr3.3:77471498-77471517 | MS.gene06603:CDS | 45.0% | |
| AGCCATTCAGAGAGAGATTG+CGG | + | chr3.3:77471195-77471214 | None:intergenic | 45.0% | |
| AGCTTGGGTCTGTGATTAAC+GGG | - | chr3.3:77471514-77471533 | MS.gene06603:CDS | 45.0% | |
| AGGTTCAGAATCATCAAGCG+AGG | + | chr3.3:77471316-77471335 | None:intergenic | 45.0% | |
| ATTCCTGATGCGATTCCACA+AGG | + | chr3.3:77471395-77471414 | None:intergenic | 45.0% | |
| CAGAATCTGCTGCTGTTAGA+GGG | - | chr3.3:77471481-77471500 | MS.gene06603:CDS | 45.0% | |
| GAGCTTGGGTCTGTGATTAA+CGG | - | chr3.3:77471513-77471532 | MS.gene06603:CDS | 45.0% | |
| GAGGGATTAAGGAAGAGCTT+GGG | - | chr3.3:77471499-77471518 | MS.gene06603:CDS | 45.0% | |
| GCAGATTCTGGATCCTCATT+CGG | + | chr3.3:77471471-77471490 | None:intergenic | 45.0% | |
| GGAGGTGAAGAGAAAGCAAA+CGG | + | chr3.3:77471001-77471020 | None:intergenic | 45.0% | |
| TCGCATCAGGAATTGTCTGA+TGG | - | chr3.3:77471402-77471421 | MS.gene06603:CDS | 45.0% | |
| TGATGGAAAAGTGAGGGAGA+GGG | - | chr3.3:77471419-77471438 | MS.gene06603:CDS | 45.0% | |
| TGCTGCTGTTAGAGGGATTA+AGG | - | chr3.3:77471488-77471507 | MS.gene06603:CDS | 45.0% | |
| TTCGTATGAGATGAGAGTGG+AGG | - | chr3.3:77471575-77471594 | MS.gene06603:CDS | 45.0% | |
| TTGTTAGTGGTTGTAACGGC+GGG | + | chr3.3:77470927-77470946 | None:intergenic | 45.0% | |
| ! | AGGAATTCAGGGTCTTATCC+TGG | - | chr3.3:77471600-77471619 | MS.gene06603:CDS | 45.0% |
| ! | CTCTGGCTTGAACTTTCTCA+GGG | - | chr3.3:77471285-77471304 | MS.gene06603:CDS | 45.0% |
| ! | TCTCTGGCTTGAACTTTCTC+AGG | - | chr3.3:77471284-77471303 | MS.gene06603:CDS | 45.0% |
| !! | AGGACAGTTTGTTGTTGTGG+GGG | + | chr3.3:77471040-77471059 | None:intergenic | 45.0% |
| !! | TCGAACCGTTCAGGTTGTTA+CGG | - | chr3.3:77471341-77471360 | MS.gene06603:CDS | 45.0% |
| !!! | AGGAAACGACGTGGTTTTAG+AGG | + | chr3.3:77471075-77471094 | None:intergenic | 45.0% |
| !!! | GGAAACGACGTGGTTTTAGA+GGG | + | chr3.3:77471074-77471093 | None:intergenic | 45.0% |
| !!! | GTGGTTTTAGAGGGAAAGAG+AGG | + | chr3.3:77471065-77471084 | None:intergenic | 45.0% |
| ACAACCTGAACGGTTCGAAC+AGG | + | chr3.3:77471339-77471358 | None:intergenic | 50.0% | |
| AGAGTGGAGGAGAGGAATTC+AGG | - | chr3.3:77471588-77471607 | MS.gene06603:CDS | 50.0% | |
| ATGAGATGAGAGTGGAGGAG+AGG | - | chr3.3:77471580-77471599 | MS.gene06603:CDS | 50.0% | |
| CCAGAATCTGCTGCTGTTAG+AGG | - | chr3.3:77471480-77471499 | MS.gene06603:CDS | 50.0% | |
| CCGAACCGTAACAACCTGAA+CGG | + | chr3.3:77471349-77471368 | None:intergenic | 50.0% | |
| CCTCTAACAGCAGCAGATTC+TGG | + | chr3.3:77471483-77471502 | None:intergenic | 50.0% | |
| CTGATGGAAAAGTGAGGGAG+AGG | - | chr3.3:77471418-77471437 | MS.gene06603:CDS | 50.0% | |
| GAGTGGAGGAGAGGAATTCA+GGG | - | chr3.3:77471589-77471608 | MS.gene06603:CDS | 50.0% | |
| GATGGAAAAGTGAGGGAGAG+GGG | - | chr3.3:77471420-77471439 | MS.gene06603:CDS | 50.0% | |
| GCTTGGGTCTGTGATTAACG+GGG | - | chr3.3:77471515-77471534 | MS.gene06603:CDS | 50.0% | |
| GGAGAAGATGAAGCCGAATG+AGG | - | chr3.3:77471455-77471474 | MS.gene06603:CDS | 50.0% | |
| GGCTTCATCTTCTCCGACAA+CGG | + | chr3.3:77471450-77471469 | None:intergenic | 50.0% | |
| TGTTAGTGGTTGTAACGGCG+GGG | + | chr3.3:77470926-77470945 | None:intergenic | 50.0% | |
| TTCAGATTCCTTCGCCACGT+GGG | - | chr3.3:77471230-77471249 | MS.gene06603:CDS | 50.0% | |
| ! | GGGTCTTATCCTGGTTTACC+TGG | - | chr3.3:77471609-77471628 | MS.gene06603:CDS | 50.0% |
| ! | GGTGTTGTGAGATCTTGAGG+AGG | + | chr3.3:77471019-77471038 | None:intergenic | 50.0% |
| !! | CCGTTCAGGTTGTTACGGTT+CGG | - | chr3.3:77471346-77471365 | MS.gene06603:CDS | 50.0% |
| !! | CGTTCAGGTTGTTACGGTTC+GGG | - | chr3.3:77471347-77471366 | MS.gene06603:CDS | 50.0% |
| !! | GGGATTTTGAGGAAACGACG+TGG | + | chr3.3:77471084-77471103 | None:intergenic | 50.0% |
| !! | GTTGTTACGGTTCGGGTTGT+GGG | - | chr3.3:77471354-77471373 | MS.gene06603:CDS | 50.0% |
| !! | TAGACATGGCGGGGATTTTG+AGG | + | chr3.3:77471095-77471114 | None:intergenic | 50.0% |
| !! | TTGTTACGGTTCGGGTTGTG+GGG | - | chr3.3:77471355-77471374 | MS.gene06603:CDS | 50.0% |
| ACAGTGGAGGGTTTGCCAGT+GGG | - | chr3.3:77471660-77471679 | MS.gene06603:CDS | 55.0% | |
| ACCTCCTGTTCGAACCGTTC+AGG | - | chr3.3:77471332-77471351 | MS.gene06603:CDS | 55.0% | |
| ACCTGAACGGTTCGAACAGG+AGG | + | chr3.3:77471336-77471355 | None:intergenic | 55.0% | |
| CACGTGGCGAAGGAATCTGA+AGG | + | chr3.3:77471231-77471250 | None:intergenic | 55.0% | |
| CGCCGCAATCTCTCTCTGAA+TGG | - | chr3.3:77471190-77471209 | MS.gene06603:CDS | 55.0% | |
| CTTCAGATTCCTTCGCCACG+TGG | - | chr3.3:77471229-77471248 | MS.gene06603:CDS | 55.0% | |
| GAAAAGTGAGGGAGAGGGGT+AGG | - | chr3.3:77471424-77471443 | MS.gene06603:CDS | 55.0% | |
| TACAGTGGAGGGTTTGCCAG+TGG | - | chr3.3:77471659-77471678 | MS.gene06603:CDS | 55.0% | |
| TCAGATTCCTTCGCCACGTG+GGG | - | chr3.3:77471231-77471250 | MS.gene06603:CDS | 55.0% | |
| TTTAACACCCCACGTGGCGA+AGG | + | chr3.3:77471241-77471260 | None:intergenic | 55.0% | |
| !! | GGGGGTGTTGTGAGATCTTG+AGG | + | chr3.3:77471022-77471041 | None:intergenic | 55.0% |
| !! | GGTTGTTACGGTTCGGGTTG+TGG | - | chr3.3:77471353-77471372 | MS.gene06603:CDS | 55.0% |
| !! | GTTCGGGTTGTGGGGAAAGA+TGG | - | chr3.3:77471363-77471382 | MS.gene06603:CDS | 55.0% |
| GCGGCGATGCGAAATTGCGA+CGG | + | chr3.3:77471176-77471195 | None:intergenic | 60.0% | |
| TCCCGGTTTAACACCCCACG+TGG | + | chr3.3:77471247-77471266 | None:intergenic | 60.0% | |
| ! | CGCCACGTGGGGTGTTAAAC+CGG | - | chr3.3:77471242-77471261 | MS.gene06603:CDS | 60.0% |
| ! | GCCACGTGGGGTGTTAAACC+GGG | - | chr3.3:77471243-77471262 | MS.gene06603:CDS | 60.0% |
| GGAGAGGGGTAGGCCGTTGT+CGG | - | chr3.3:77471434-77471453 | MS.gene06603:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 77470919 | 77471806 | 77470919 | ID=MS.gene06603 |
| chr3.3 | mRNA | 77470919 | 77471806 | 77470919 | ID=MS.gene06603.t1;Parent=MS.gene06603 |
| chr3.3 | exon | 77470919 | 77471806 | 77470919 | ID=MS.gene06603.t1.exon1;Parent=MS.gene06603.t1 |
| chr3.3 | CDS | 77470919 | 77471806 | 77470919 | ID=cds.MS.gene06603.t1;Parent=MS.gene06603.t1 |
| Gene Sequence |
| Protein sequence |
