AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene52770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52770.t1 MTR_3g115340 95.104 817 28 4 1 807 1 815 0.0 1587
MS.gene52770.t1 MTR_3g115340 93.614 830 28 5 1 807 1 828 0.0 1577
MS.gene52770.t1 MTR_3g115340 97.185 746 18 2 63 807 1 744 0.0 1517
MS.gene52770.t1 MTR_7g104080 56.921 708 278 7 82 777 173 865 0.0 833
MS.gene52770.t1 MTR_7g104080 56.921 708 278 7 82 777 170 862 0.0 832
MS.gene52770.t1 MTR_7g104080 59.712 556 205 6 82 625 173 721 0.0 698
MS.gene52770.t1 MTR_3g053220 42.144 541 300 7 183 722 339 867 1.89e-149 461
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52770.t1 AT2G36390 57.434 686 265 8 82 755 160 830 0.0 818
MS.gene52770.t1 AT5G03650 54.424 746 296 12 37 759 75 799 0.0 818
MS.gene52770.t1 AT3G20440 40.378 582 318 10 183 759 334 891 1.82e-148 458
MS.gene52770.t1 AT3G20440 41.455 550 297 9 183 722 334 868 8.76e-146 451
MS.gene52770.t1 AT3G20440 38.316 582 300 11 183 759 334 861 5.03e-132 414

Find 209 sgRNAs with CRISPR-Local

Find 417 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTAGGTTATTTGAAATT+TGG 0.117300 3.1:-91245962 MS.gene52770:intron
AGTGATCTTTGAATGGTTTA+AGG 0.157463 3.1:+91246449 None:intergenic
TCAAACATAGTGATGGATTT+TGG 0.176936 3.1:-91245643 MS.gene52770:CDS
GGAACTCCTGGTATGCCTTC+TGG 0.197267 3.1:+91241401 None:intergenic
TGAACATACAGGTATAAAAT+TGG 0.211155 3.1:-91241845 MS.gene52770:intron
AGAAAGCAACAGTGCCAATT+TGG 0.212689 3.1:-91240939 MS.gene52770:CDS
TGGCACTGTTGCTTTCTTCT+TGG 0.223618 3.1:+91240945 None:intergenic
ATCATTGCTGAAGATGTTTC+TGG 0.228300 3.1:-91244117 MS.gene52770:CDS
CGATTATTGAAATTTGTTTC+AGG 0.232263 3.1:+91241380 None:intergenic
GATAGTGATGCTCAGGAATT+TGG 0.241372 3.1:-91241788 MS.gene52770:CDS
CTCTTGGGCAGTCCATTGTT+GGG 0.244035 3.1:-91243717 MS.gene52770:intron
CTTGAATTGTGAGGTATAAC+TGG 0.247832 3.1:+91245680 None:intergenic
TTTCGTCGAATTTGACAAAT+AGG 0.248374 3.1:-91243963 MS.gene52770:CDS
ACGTAGTCAATCCACTTATC+AGG 0.249889 3.1:+91244024 None:intergenic
TGAAGAGAAGCACAAATTAT+TGG 0.259302 3.1:-91245794 MS.gene52770:intron
AACCTCGCATAAACTCTTAT+AGG 0.267724 3.1:-91244722 MS.gene52770:CDS
ATAGAGGCTACCACAAATTA+TGG 0.268797 3.1:-91244398 MS.gene52770:CDS
TTGCATCTGGCAAAATATTA+TGG 0.272115 3.1:+91244142 None:intergenic
TTCATATATCCGTGGAGCTT+TGG 0.279144 3.1:+91244770 None:intergenic
ATCAGATATTTAAGATCTTC+GGG 0.284356 3.1:+91244555 None:intergenic
ACCACCTTAAATTAGATAAA+AGG 0.285126 3.1:+91244331 None:intergenic
CATTCCTATTATGCATCATT+TGG 0.289018 3.1:-91244624 MS.gene52770:CDS
ATATCCAAATGATGCATAAT+AGG 0.289848 3.1:+91244620 None:intergenic
ACAATTCAAGAGTGAAGTTT+AGG 0.293498 3.1:-91245667 MS.gene52770:CDS
GAAGAGAAGCACAAATTATT+GGG 0.298035 3.1:-91245793 MS.gene52770:intron
CTGGATGAGTTCAAATTTGA+TGG 0.298691 3.1:-91244306 MS.gene52770:CDS
TTTGATGGATTTCGATTTGA+TGG 0.299141 3.1:-91244291 MS.gene52770:CDS
TCCCACAATTAGGTCAGTTC+TGG 0.299935 3.1:-91246568 MS.gene52770:intron
CACCCTACGACGGTGTCTAC+TGG 0.305560 3.1:-91245562 MS.gene52770:CDS
GAACTCCTGGTATGCCTTCT+GGG 0.307643 3.1:+91241402 None:intergenic
CCTCATTGCCCATAAAATTA+AGG 0.309448 3.1:+91243420 None:intergenic
TCATATATCCGTGGAGCTTT+GGG 0.316377 3.1:+91244771 None:intergenic
CCAGTTTCTGAGGCGGGAAT+TGG 0.319787 3.1:-91244075 MS.gene52770:CDS
TATCAGATATTTAAGATCTT+CGG 0.324291 3.1:+91244554 None:intergenic
GGAATCAACATGGCATTTAC+AGG 0.328591 3.1:-91244240 MS.gene52770:CDS
GGACTCTTCTACACCCAAAT+TGG 0.331698 3.1:+91240925 None:intergenic
GGAGAGGACCTTGAAGGAAT+TGG 0.335296 3.1:+91241355 None:intergenic
CTTTGAAAACATAGGAATCT+TGG 0.335923 3.1:-91246485 MS.gene52770:CDS
AGCTTTGGGCTTCGGTGGAC+GGG 0.338525 3.1:+91244785 None:intergenic
AATTTGCTTTCAAAGAATTT+CGG 0.338876 3.1:+91240829 None:intergenic
ATCCGTGGAGCTTTGGGCTT+CGG 0.338999 3.1:+91244777 None:intergenic
TCTCTTGGGCAGTCCATTGT+TGG 0.345283 3.1:-91243718 MS.gene52770:intron
CCAATTCCCGCCTCAGAAAC+TGG 0.356448 3.1:+91244075 None:intergenic
GAGCTTTGGGCTTCGGTGGA+CGG 0.362407 3.1:+91244784 None:intergenic
TCAAACACCTTGCATCCATT+TGG 0.366934 3.1:+91246841 None:intergenic
CTCCATCCATTGCCTTCTCT+TGG 0.367812 3.1:+91242788 None:intergenic
GAAGATGTTTCTGGCATGCC+TGG 0.374304 3.1:-91244108 MS.gene52770:CDS
GTCGTAGGGTGCGGCAAATC+TGG 0.384660 3.1:+91245574 None:intergenic
AGTAAGATTCTTGTGAACTT+TGG 0.394257 3.1:+91244433 None:intergenic
GAAAGCAACAGTGCCAATTT+GGG 0.396306 3.1:-91240938 MS.gene52770:CDS
ACCTCGCATAAACTCTTATA+GGG 0.407698 3.1:-91244721 MS.gene52770:CDS
TTTGATGCTGGCCAACTGTC+TGG 0.414017 3.1:-91244166 MS.gene52770:CDS
TTGTTCTCTGTAGAAACATC+AGG 0.415944 3.1:+91240869 None:intergenic
CACTTCTTAACCATGGCATT+AGG 0.416044 3.1:-91243455 MS.gene52770:CDS
TACTTTCACACTGGGGATAG+AGG 0.416762 3.1:-91244414 MS.gene52770:CDS
GTGATCTTTGAATGGTTTAA+GGG 0.420952 3.1:+91246450 None:intergenic
ATCTAATTTAAGGTGGTGGC+TGG 0.421670 3.1:-91244325 MS.gene52770:CDS
TACCCTTCGTATGTATTCTC+TGG 0.431849 3.1:+91242000 None:intergenic
TAATGCTCCATACGCCAAAC+TGG 0.432457 3.1:+91245726 None:intergenic
TTAGGTCAGTTCTGGTTTCA+AGG 0.433435 3.1:-91246560 MS.gene52770:intron
TGCTGTTGTCTATTTGATGC+TGG 0.436623 3.1:-91244178 MS.gene52770:CDS
ACTGGGTTTCCATCAGCATC+AGG 0.438554 3.1:+91245698 None:intergenic
GAGAGGACCTTGAAGGAATT+GGG 0.440855 3.1:+91241356 None:intergenic
CGCACGCTACCTTGTATCTC+AGG 0.447917 3.1:+91242720 None:intergenic
TCCATCCATTGCCTTCTCTT+GGG 0.450169 3.1:+91242789 None:intergenic
AATTTGAAGTGATCTTTGAA+TGG 0.451463 3.1:+91246442 None:intergenic
CTTGGCTATCATAATCCAAA+TGG 0.453549 3.1:-91246856 MS.gene52770:CDS
GTCTACTATCCCATAATTTG+TGG 0.454392 3.1:+91244388 None:intergenic
GAACATACAGGTATAAAATT+GGG 0.458728 3.1:-91241844 MS.gene52770:intron
TTTGCTGTGAGTAGTAGATC+TGG 0.463075 3.1:-91244582 MS.gene52770:CDS
TGCACTGGATAGTGATGCTC+AGG 0.471330 3.1:-91241795 MS.gene52770:CDS
GCTCCATCACAGCCATCAGC+TGG 0.472067 3.1:+91244646 None:intergenic
AATATTACTGATGGACTCAA+TGG 0.472465 3.1:-91244468 MS.gene52770:CDS
ACATCCCCAGAAGGCATACC+AGG 0.475638 3.1:-91241407 MS.gene52770:CDS
AAACATGCAAACCTAGGCTA+TGG 0.476284 3.1:+91244523 None:intergenic
AGTCTTTGAACGTGGTGATC+TGG 0.478627 3.1:-91242043 MS.gene52770:CDS
AAATTTGTTTCAGGAACTCC+TGG 0.479252 3.1:+91241389 None:intergenic
TAATCGACCCAATTCCTTCA+AGG 0.480045 3.1:-91241363 MS.gene52770:CDS
GGCCGACCAGTTTCTGAGGC+GGG 0.481889 3.1:-91244081 MS.gene52770:CDS
TAGCCAAGTGCCACATGTAC+AGG 0.483731 3.1:+91246871 None:intergenic
GAGATAACTTACTGAGCAGC+AGG 0.488318 3.1:+91245896 None:intergenic
GCTTTGGGCTTCGGTGGACG+GGG 0.488805 3.1:+91244786 None:intergenic
GCAATCCCTCGGTCAATAGT+AGG 0.491136 3.1:+91243622 None:intergenic
GTTTCTGGCATGCCTGGACT+CGG 0.497797 3.1:-91244102 MS.gene52770:CDS
TATTACGTGGTGAGTGGTGG+AGG 0.499253 3.1:+91247125 None:intergenic
TAATGGGACCTTTCTGAAAG+TGG 0.504924 3.1:+91245533 None:intergenic
GAAACTGGTCGGCCGAGTCC+AGG 0.505330 3.1:+91244090 None:intergenic
CAAGAATCTTACTTTCACAC+TGG 0.506433 3.1:-91244423 MS.gene52770:CDS
TAGAGGCTACCACAAATTAT+GGG 0.507122 3.1:-91244397 MS.gene52770:CDS
TTTAGGTTCAAACATAGTGA+TGG 0.510186 3.1:-91245650 MS.gene52770:CDS
AAAATTGGGTGTGACTTGCC+TGG 0.513053 3.1:-91241830 MS.gene52770:CDS
AGAACAAGAAAGACTATGAA+TGG 0.517137 3.1:-91243999 MS.gene52770:CDS
TCAGCAATGATAGTTGCATC+TGG 0.517883 3.1:+91244129 None:intergenic
ATCAGTATCTGCTGCAGCAA+AGG 0.518682 3.1:+91240904 None:intergenic
TCTTGGGCAGTCCATTGTTG+GGG 0.519269 3.1:-91243716 MS.gene52770:intron
GCTCAGGAATTTGGAGGACA+TGG 0.519694 3.1:-91241779 MS.gene52770:CDS
TAGGTCAGTTCTGGTTTCAA+GGG 0.521375 3.1:-91246559 MS.gene52770:CDS
TGGACTCAATGGCTTTGATG+TGG 0.526196 3.1:-91244457 MS.gene52770:CDS
ACCCTACGACGGTGTCTACT+GGG 0.526553 3.1:-91245561 MS.gene52770:CDS
GGGTTGATCGCATCCCCGCT+TGG 0.528655 3.1:-91245622 MS.gene52770:CDS
TCAATGTTGTATCATCATCA+TGG 0.529165 3.1:-91244261 MS.gene52770:CDS
CACAGGTACGAGGTGGGGAG+AGG 0.532821 3.1:+91241339 None:intergenic
CCGAGGGATTGCTCTTCACA+AGG 0.534323 3.1:-91243611 MS.gene52770:intron
GGTCTTGAGGAATTTGCAAA+AGG 0.534854 3.1:-91246367 MS.gene52770:intron
GGATTTAACAGAGAAGAAGA+TGG 0.538133 3.1:-91245941 MS.gene52770:CDS
AAATATTACGTGGTGAGTGG+TGG 0.541193 3.1:+91247122 None:intergenic
TGACTTATCATCTGTCATAA+CGG 0.541780 3.1:+91246531 None:intergenic
GTGGCATATTTAATCCAAGC+GGG 0.543987 3.1:+91245608 None:intergenic
TGCCTTCTGGGGATGTGAAG+TGG 0.544097 3.1:+91241414 None:intergenic
GGCAATGTTGAAAGCGAAAG+AGG 0.545850 3.1:+91247146 None:intergenic
CCATGGCTATCCCTGATAAG+TGG 0.546456 3.1:-91244035 MS.gene52770:CDS
GTAGACACCGTCGTAGGGTG+CGG 0.547097 3.1:+91245565 None:intergenic
GATGGAGTTACGAGAAATGC+AGG 0.547660 3.1:-91242772 MS.gene52770:CDS
AGACTATGAATGGTCAATGA+AGG 0.549129 3.1:-91243989 MS.gene52770:CDS
TGGGAAATACAGAGTTGCAC+TGG 0.549708 3.1:-91241810 MS.gene52770:CDS
TGGATTGATTTCCCAAGAGA+AGG 0.553145 3.1:-91242800 MS.gene52770:CDS
TCTTAAATATCTGATAGATA+AGG 0.556006 3.1:-91244547 MS.gene52770:CDS
AAGCTCATTGAAGATTATGA+AGG 0.556119 3.1:-91246391 MS.gene52770:CDS
AAGCCTGTACATGTGGCACT+TGG 0.556620 3.1:-91246874 MS.gene52770:CDS
TCCCAGTAGACACCGTCGTA+GGG 0.556929 3.1:+91245560 None:intergenic
GCTAGTAATAATATTACTGA+TGG 0.558861 3.1:-91244477 MS.gene52770:CDS
CGTGGAGCTTTGGGCTTCGG+TGG 0.563157 3.1:+91244780 None:intergenic
CGTAGTCAATCCACTTATCA+GGG 0.564048 3.1:+91244025 None:intergenic
AAGAATCTTACTTTCACACT+GGG 0.566091 3.1:-91244422 MS.gene52770:CDS
GAGCAGCAGGTGCCCACTCA+CGG 0.566483 3.1:+91245909 None:intergenic
TTCTTAACCATGGCATTAGG+TGG 0.568818 3.1:-91243452 MS.gene52770:CDS
ATAGATAAGGCCCATAGCCT+AGG 0.569541 3.1:-91244534 MS.gene52770:CDS
AGATTATGAAGGAGGTCTTG+AGG 0.570199 3.1:-91246380 MS.gene52770:CDS
ACGAGAAATGCAGGCGTCAG+TGG 0.570835 3.1:-91242763 MS.gene52770:CDS
TCCCAAGAGAAGGCAATGGA+TGG 0.571347 3.1:-91242790 MS.gene52770:CDS
ACGGATATATGAAGCTCATG+TGG 0.572120 3.1:-91244760 MS.gene52770:CDS
AAGATGCTGCTTATTTGTTG+AGG 0.572790 3.1:+91246906 None:intergenic
GAAGAAGACTTTGAAAACAT+AGG 0.574933 3.1:-91246493 MS.gene52770:CDS
AACATGCAAACCTAGGCTAT+GGG 0.576008 3.1:+91244524 None:intergenic
ATTAAGATCCCTGATGCTGA+TGG 0.577589 3.1:-91245707 MS.gene52770:CDS
TTGAATTGTGAGGTATAACT+GGG 0.578742 3.1:+91245681 None:intergenic
CTCATTGAAGATTATGAAGG+AGG 0.579941 3.1:-91246388 MS.gene52770:CDS
AACCATGGCATTAGGTGGAG+AGG 0.580599 3.1:-91243447 MS.gene52770:CDS
AGTCCAGCTGATGGCTGTGA+TGG 0.580857 3.1:-91244649 MS.gene52770:CDS
AGGTGGGGAGAGGACCTTGA+AGG 0.582361 3.1:+91241349 None:intergenic
GAATCAACATGGCATTTACA+GGG 0.583971 3.1:-91244239 MS.gene52770:CDS
CCATCAAAACATGCAAACCT+AGG 0.585432 3.1:+91244517 None:intergenic
CAGGCGTCAGTGGAATCTTG+TGG 0.586763 3.1:-91242753 MS.gene52770:CDS
TTTAGTTTGGCCATCCGGAG+TGG 0.586788 3.1:-91242820 MS.gene52770:intron
ACCATGGCATTAGGTGGAGA+GGG 0.586812 3.1:-91243446 MS.gene52770:CDS
AGTGCAACTCTGTATTTCCC+AGG 0.587563 3.1:+91241812 None:intergenic
AGTGATGCTCAGGAATTTGG+AGG 0.588177 3.1:-91241785 MS.gene52770:CDS
TCATAATCCAAATGGATGCA+AGG 0.588291 3.1:-91246848 MS.gene52770:CDS
GCCCTCTCCACCTAATGCCA+TGG 0.589435 3.1:+91243445 None:intergenic
TACCACACAGGTACGAGGTG+GGG 0.589961 3.1:+91241334 None:intergenic
AATATTATGGACCAGACAGT+TGG 0.590093 3.1:+91244155 None:intergenic
GGGATCCACCACTTTCAGAA+AGG 0.590680 3.1:-91245541 MS.gene52770:intron
GGATGGTTCCAACCATCACA+TGG 0.590844 3.1:-91245756 MS.gene52770:CDS
AACTCCTGGTATGCCTTCTG+GGG 0.593273 3.1:+91241403 None:intergenic
GATGATACACTTCTTAACCA+TGG 0.594144 3.1:-91243462 MS.gene52770:CDS
CTATAATACAGTCCAGCTGA+TGG 0.596190 3.1:-91244658 MS.gene52770:CDS
TGATAAGTCAACAATGGCAT+CGG 0.597287 3.1:-91246518 MS.gene52770:CDS
AAGAGAAGCACAAATTATTG+GGG 0.599266 3.1:-91245792 MS.gene52770:CDS
ACAAAGATCATACTTGGTCG+TGG 0.600122 3.1:+91243905 None:intergenic
CAAGCAAAAGCCTGTACATG+TGG 0.600160 3.1:-91246881 MS.gene52770:CDS
GGGAAATATTACGTGGTGAG+TGG 0.600455 3.1:+91247119 None:intergenic
AAATTGGGTGTGACTTGCCT+GGG 0.601704 3.1:-91241829 MS.gene52770:CDS
TCCAAAGGTATATTATAGAG+TGG 0.603981 3.1:-91240975 MS.gene52770:intron
ACTCGGCCGACCAGTTTCTG+AGG 0.608346 3.1:-91244085 MS.gene52770:CDS
CACCGAAGCCCAAAGCTCCA+CGG 0.610413 3.1:-91244779 MS.gene52770:CDS
CTGGGTTTCCATCAGCATCA+GGG 0.610509 3.1:+91245699 None:intergenic
AACTTCACTCTTGAATTGTG+AGG 0.611310 3.1:+91245671 None:intergenic
GATTTCCCAAGAGAAGGCAA+TGG 0.616777 3.1:-91242794 MS.gene52770:CDS
CAGATATTTAAGATCTTCGG+GGG 0.617013 3.1:+91244557 None:intergenic
GGAAATCAATCCACTCCGGA+TGG 0.617273 3.1:+91242810 None:intergenic
CAGCACTAACAATGAAGACA+AGG 0.618234 3.1:-91242316 MS.gene52770:intron
ATGGCGTTGTGTACCGTGAG+TGG 0.618949 3.1:-91245922 MS.gene52770:CDS
CCTTGTGAAGAGCAATCCCT+CGG 0.620184 3.1:+91243611 None:intergenic
CTTGGGAAATCAATCCACTC+CGG 0.620373 3.1:+91242806 None:intergenic
TGGGACCTTTCTGAAAGTGG+TGG 0.620766 3.1:+91245536 None:intergenic
TACAGATCACCTGAGATACA+AGG 0.621689 3.1:-91242729 MS.gene52770:intron
AATAGTCTTGTCCCCAACAA+TGG 0.621734 3.1:+91243705 None:intergenic
GGACTCAATGGCTTTGATGT+GGG 0.622405 3.1:-91244456 MS.gene52770:CDS
ATCCAGAGAATACATACGAA+GGG 0.623560 3.1:-91242002 MS.gene52770:intron
TAGGGTGCGGCAAATCTGGT+AGG 0.623566 3.1:+91245578 None:intergenic
CGGCCGACCAGTTTCTGAGG+CGG 0.625199 3.1:-91244082 MS.gene52770:CDS
TTCCCGCCTCAGAAACTGGT+CGG 0.626027 3.1:+91244079 None:intergenic
GAAACGAAGAACTTCCCAGT+TGG 0.627819 3.1:+91244353 None:intergenic
CTCCCCACCTCGTACCTGTG+TGG 0.633791 3.1:-91241336 MS.gene52770:intron
ATACCACACAGGTACGAGGT+GGG 0.634560 3.1:+91241333 None:intergenic
CTTCTCCTACTATTGACCGA+GGG 0.640298 3.1:-91243627 MS.gene52770:CDS
GACAGATGATAAGTCAACAA+TGG 0.642453 3.1:-91246524 MS.gene52770:CDS
CGGATATATGAAGCTCATGT+GGG 0.644171 3.1:-91244759 MS.gene52770:CDS
TCCCTATAAGAGTTTATGCG+AGG 0.645804 3.1:+91244720 None:intergenic
GACCACTTCACATCCCCAGA+AGG 0.647751 3.1:-91241416 MS.gene52770:CDS
CATCCAGAGAATACATACGA+AGG 0.647997 3.1:-91242003 MS.gene52770:CDS
TATTATTACTAGCATGACTG+TGG 0.653570 3.1:+91244487 None:intergenic
TCAGATATTTAAGATCTTCG+GGG 0.655792 3.1:+91244556 None:intergenic
CCACTTATCAGGGATAGCCA+TGG 0.656646 3.1:+91244035 None:intergenic
TGGCGTTGTGTACCGTGAGT+GGG 0.662129 3.1:-91245921 MS.gene52770:CDS
ACATGAGCTTCATATATCCG+TGG 0.671060 3.1:+91244762 None:intergenic
AGATTTGCCGCACCCTACGA+CGG 0.679295 3.1:-91245572 MS.gene52770:CDS
ATCCCAGTAGACACCGTCGT+AGG 0.679563 3.1:+91245559 None:intergenic
CATACCACACAGGTACGAGG+TGG 0.680818 3.1:+91241332 None:intergenic
TCATCATCATGGAATCAACA+TGG 0.689050 3.1:-91244250 MS.gene52770:CDS
GCTTCTCCTACTATTGACCG+AGG 0.695039 3.1:-91243628 MS.gene52770:CDS
AATCAACATGGCATTTACAG+GGG 0.699309 3.1:-91244238 MS.gene52770:CDS
TAGGTTATAGTCTTTGAACG+TGG 0.699432 3.1:-91242051 MS.gene52770:CDS
TCACATACCACACAGGTACG+AGG 0.699894 3.1:+91241329 None:intergenic
TGGCATATTTAATCCAAGCG+GGG 0.705246 3.1:+91245609 None:intergenic
GATCAGATCACATACCACAC+AGG 0.729306 3.1:+91241322 None:intergenic
AAATCTGGTAGGATCGACAG+TGG 0.729665 3.1:+91245589 None:intergenic
AGAATCTTACTTTCACACTG+GGG 0.746987 3.1:-91244421 MS.gene52770:CDS
AGTGGCATATTTAATCCAAG+CGG 0.761398 3.1:+91245607 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTGTTTATTCAAATT+AGG - chr3.1:91242870-91242889 MS.gene52770:intron 10.0%
!! ATACAAAAATTTAAATGAAA+AGG + chr3.1:91246695-91246714 None:intergenic 10.0%
!! TACAAAAATTTAAATGAAAA+GGG + chr3.1:91246694-91246713 None:intergenic 10.0%
!! TTTAAATAACTATATTTGAT+TGG + chr3.1:91242852-91242871 None:intergenic 10.0%
!!! AATAATATAGAATTTAGTTT+TGG - chr3.1:91244147-91244166 MS.gene52770:CDS 10.0%
!!! AATTTCTTTTAGATTAAAAA+AGG - chr3.1:91240921-91240940 MS.gene52770:CDS 10.0%
!!! TTGAAAATTTATTTGTTTTT+AGG - chr3.1:91242626-91242645 MS.gene52770:intron 10.0%
!! AATTACTTAGTTATAAAGTT+TGG - chr3.1:91242687-91242706 MS.gene52770:intron 15.0%
!! ATCATAAATAATTAAACTTG+CGG + chr3.1:91245367-91245386 None:intergenic 15.0%
!! ATTCTACATATGTAAATAAT+GGG + chr3.1:91242477-91242496 None:intergenic 15.0%
!! TAGTAAAAAAATGTTACATT+AGG + chr3.1:91245736-91245755 None:intergenic 15.0%
!! TATTCTACATATGTAAATAA+TGG + chr3.1:91242478-91242497 None:intergenic 15.0%
!!! AATGTCATTTTTATTTAGTT+TGG - chr3.1:91245158-91245177 MS.gene52770:intron 15.0%
!!! AGATTTTTGAAGAATTAATT+TGG - chr3.1:91246333-91246352 MS.gene52770:intron 15.0%
!! ATAAGGAACTAAACAAAATA+AGG + chr3.1:91245476-91245495 None:intergenic 20.0%
!! GTAATCAAATATAACTTTGA+AGG + chr3.1:91246298-91246317 None:intergenic 20.0%
!! TACAACAAAGTAACAAAAAA+GGG + chr3.1:91240895-91240914 None:intergenic 20.0%
!! TCATTAAGAAGATAAATATC+AGG + chr3.1:91244658-91244677 None:intergenic 20.0%
!! TCTTAAATATCTGATAGATA+AGG - chr3.1:91243444-91243463 MS.gene52770:CDS 20.0%
!! TTACAACAAAGTAACAAAAA+AGG + chr3.1:91240896-91240915 None:intergenic 20.0%
!! TTGAATTTGAAAATTTCCAA+AGG - chr3.1:91247001-91247020 MS.gene52770:intron 20.0%
!!! AAAATTTCATTTTCACTTCA+TGG - chr3.1:91246960-91246979 MS.gene52770:intron 20.0%
!!! AACATAGAATTTTAGAACAT+TGG - chr3.1:91246775-91246794 MS.gene52770:intron 20.0%
!!! AAGGTATATTTGTTAAGAAA+TGG - chr3.1:91241192-91241211 MS.gene52770:intron 20.0%
!!! AGGTATATTTGTTAAGAAAT+GGG - chr3.1:91241193-91241212 MS.gene52770:intron 20.0%
!!! ATATGATTTAATTTGCATGT+TGG + chr3.1:91246413-91246432 None:intergenic 20.0%
!!! ATCTTAGGTTATTTGAAATT+TGG - chr3.1:91242029-91242048 MS.gene52770:CDS 20.0%
!!! GCTTATGTTTTTTCTTTTAT+AGG - chr3.1:91245921-91245940 MS.gene52770:CDS 20.0%
!!! GTTTCCTTTTATCTAATTTA+AGG - chr3.1:91243656-91243675 MS.gene52770:CDS 20.0%
!!! TATCAGATATTTAAGATCTT+CGG + chr3.1:91243440-91243459 None:intergenic 20.0%
! AAACATTTGTGCTTGTAATT+TGG - chr3.1:91241023-91241042 MS.gene52770:intron 25.0%
! AAATAAAATATGACTGCATG+TGG + chr3.1:91242947-91242966 None:intergenic 25.0%
! AATCTAATACCAGAAAGATT+AGG + chr3.1:91246251-91246270 None:intergenic 25.0%
! ACCACCTTAAATTAGATAAA+AGG + chr3.1:91243663-91243682 None:intergenic 25.0%
! ACTCAGTTACTATTATTCTA+TGG - chr3.1:91246471-91246490 MS.gene52770:CDS 25.0%
! ATAATGACAAAGATCATACT+TGG + chr3.1:91244095-91244114 None:intergenic 25.0%
! ATATCCAAATGATGCATAAT+AGG + chr3.1:91243374-91243393 None:intergenic 25.0%
! ATCTAATACCAGAAAGATTA+GGG + chr3.1:91246250-91246269 None:intergenic 25.0%
! ATGAGAATAGTACAATCATT+TGG + chr3.1:91245712-91245731 None:intergenic 25.0%
! ATGTAGTCCAGAATATTTAA+TGG + chr3.1:91244417-91244436 None:intergenic 25.0%
! ATGTTGGAAAGAAAATGATA+AGG + chr3.1:91242011-91242030 None:intergenic 25.0%
! ATTAATCCAACAAACTAGTA+AGG + chr3.1:91241961-91241980 None:intergenic 25.0%
! ATTTGTGAACAGAAAAATGA+TGG - chr3.1:91244174-91244193 MS.gene52770:CDS 25.0%
! CACATTGTTAGAAAAAGAAA+TGG + chr3.1:91246865-91246884 None:intergenic 25.0%
! CTATATTATTTCCAACACAA+AGG + chr3.1:91244137-91244156 None:intergenic 25.0%
! GAAAAGATTCAAAATCAGAA+AGG + chr3.1:91242175-91242194 None:intergenic 25.0%
! GAACATACAGGTATAAAATT+GGG - chr3.1:91246147-91246166 MS.gene52770:intron 25.0%
! GAGGAATATTTCATCATTAT+CGG + chr3.1:91241765-91241784 None:intergenic 25.0%
! GATAATCATATTACATCATC+TGG - chr3.1:91241812-91241831 MS.gene52770:CDS 25.0%
! GCTAGTAATAATATTACTGA+TGG - chr3.1:91243514-91243533 MS.gene52770:intron 25.0%
! GTATTCTATTATGAGGATAA+TGG + chr3.1:91245392-91245411 None:intergenic 25.0%
! TAATAGAATACTGTGTGAAA+TGG - chr3.1:91245401-91245420 MS.gene52770:intron 25.0%
! TATCTCACCATTAAATATTC+TGG - chr3.1:91244407-91244426 MS.gene52770:CDS 25.0%
! TGAACATACAGGTATAAAAT+TGG - chr3.1:91246146-91246165 MS.gene52770:intron 25.0%
! TGAGAATAGTACAATCATTT+GGG + chr3.1:91245711-91245730 None:intergenic 25.0%
! TTGAGATATCAATGCTAAAA+GGG - chr3.1:91242537-91242556 MS.gene52770:intron 25.0%
! TTTCAAATAACCTAAGATGT+TGG + chr3.1:91242027-91242046 None:intergenic 25.0%
!! AAAATCTAAAGTCTAAACTG+TGG + chr3.1:91246320-91246339 None:intergenic 25.0%
!! AATTTGAAGTGATCTTTGAA+TGG + chr3.1:91241552-91241571 None:intergenic 25.0%
!! ACTTACTTTGATTCCTTTTA+TGG - chr3.1:91241058-91241077 MS.gene52770:intron 25.0%
!! ATCAGATATTTAAGATCTTC+GGG + chr3.1:91243439-91243458 None:intergenic 25.0%
!! CAAATTATTGGGGATTTTAA+TGG - chr3.1:91242209-91242228 MS.gene52770:intron 25.0%
!! CGATTATTGAAATTTGTTTC+AGG + chr3.1:91246614-91246633 None:intergenic 25.0%
!! CTTTCTGGTATTAGATTATA+AGG - chr3.1:91246254-91246273 MS.gene52770:intron 25.0%
!! GACTATTGCATTTTTACTAA+TGG - chr3.1:91244302-91244321 MS.gene52770:CDS 25.0%
!! TCAAATATAACTTTGAAGGA+CGG + chr3.1:91246294-91246313 None:intergenic 25.0%
!! TCCTTTTATCTAATTTAAGG+TGG - chr3.1:91243659-91243678 MS.gene52770:CDS 25.0%
!! TTTGAGATATCAATGCTAAA+AGG - chr3.1:91242536-91242555 MS.gene52770:intron 25.0%
!!! AAATGTTGTATTTCTGCTTT+TGG - chr3.1:91245561-91245580 MS.gene52770:CDS 25.0%
!!! AATTAGTTTTGCTGAAAAGT+TGG - chr3.1:91246885-91246904 MS.gene52770:CDS 25.0%
!!! ACGTCTTATATTTTTTCTCT+TGG - chr3.1:91244258-91244277 MS.gene52770:CDS 25.0%
!!! CAAATGACTTTATTTTCAAG+AGG + chr3.1:91241907-91241926 None:intergenic 25.0%
!!! CGTCTTATATTTTTTCTCTT+GGG - chr3.1:91244259-91244278 MS.gene52770:CDS 25.0%
!!! GAAAAGTTTATTTTTGAGCA+CGG - chr3.1:91246824-91246843 MS.gene52770:CDS 25.0%
!!! TAGTCTATTTTAATCTGTCT+TGG + chr3.1:91245793-91245812 None:intergenic 25.0%
!!! TATTTTGAGATCGAATAATG+AGG - chr3.1:91246365-91246384 MS.gene52770:intron 25.0%
!!! TTTTATCTAATTTAAGGTGG+TGG - chr3.1:91243662-91243681 MS.gene52770:CDS 25.0%
AAAATATAAGACGTTAGTGC+AGG + chr3.1:91244252-91244271 None:intergenic 30.0%
AAAGTCATTTGTCTGTCAAT+TGG - chr3.1:91241916-91241935 MS.gene52770:intron 30.0%
AACTAAACAAAATAAGGCCA+CGG + chr3.1:91245470-91245489 None:intergenic 30.0%
AAGAATCTTACTTTCACACT+GGG - chr3.1:91243569-91243588 MS.gene52770:intron 30.0%
AAGCTCATTGAAGATTATGA+AGG - chr3.1:91241600-91241619 MS.gene52770:intron 30.0%
AATACAAAGAAATCTGCAGA+CGG + chr3.1:91245503-91245522 None:intergenic 30.0%
AATATATACACTGGTGTATG+AGG - chr3.1:91245821-91245840 MS.gene52770:intron 30.0%
AATATTCCTCAACTAGTACT+TGG - chr3.1:91241775-91241794 MS.gene52770:CDS 30.0%
ACAATTCAAGAGTGAAGTTT+AGG - chr3.1:91242324-91242343 MS.gene52770:CDS 30.0%
ACATCCTAGAATATATACAC+TGG - chr3.1:91245812-91245831 MS.gene52770:intron 30.0%
AGAACAAGAAAGACTATGAA+TGG - chr3.1:91243992-91244011 MS.gene52770:CDS 30.0%
AGAATAGTACAATCATTTGG+GGG + chr3.1:91245709-91245728 None:intergenic 30.0%
AGTAAGATTCTTGTGAACTT+TGG + chr3.1:91243561-91243580 None:intergenic 30.0%
AGTATTAAGAAGGATGTTCA+GGG - chr3.1:91241247-91241266 MS.gene52770:intron 30.0%
AGTCAGCTAATACTAATATG+TGG + chr3.1:91242576-91242595 None:intergenic 30.0%
AGTGATCTTTGAATGGTTTA+AGG + chr3.1:91241545-91241564 None:intergenic 30.0%
AGTTATGCTTGAAATCAACT+AGG + chr3.1:91245888-91245907 None:intergenic 30.0%
ATATACACGCAAAAATGACA+AGG + chr3.1:91246515-91246534 None:intergenic 30.0%
CAAAAAAGGGAAATATTACG+TGG + chr3.1:91240882-91240901 None:intergenic 30.0%
CACAATTGATCGATTATGTT+TGG - chr3.1:91241872-91241891 MS.gene52770:intron 30.0%
CATTCCTATTATGCATCATT+TGG - chr3.1:91243367-91243386 MS.gene52770:intron 30.0%
GAGAATAGTACAATCATTTG+GGG + chr3.1:91245710-91245729 None:intergenic 30.0%
GTGATCTTTGAATGGTTTAA+GGG + chr3.1:91241544-91241563 None:intergenic 30.0%
GTTAAACTATCATTTGTGTG+CGG - chr3.1:91246022-91246041 MS.gene52770:intron 30.0%
TAAAATGAACCTTGACTACA+AGG + chr3.1:91244949-91244968 None:intergenic 30.0%
TACACCAGTGTATATATTCT+AGG + chr3.1:91245819-91245838 None:intergenic 30.0%
TATTATTACTAGCATGACTG+TGG + chr3.1:91243507-91243526 None:intergenic 30.0%
TATTTGTGATACCTTTGTGT+TGG - chr3.1:91244123-91244142 MS.gene52770:CDS 30.0%
TCAATGTTGTATCATCATCA+TGG - chr3.1:91243730-91243749 MS.gene52770:intron 30.0%
TCACACAGTATTCTATTATG+AGG + chr3.1:91245399-91245418 None:intergenic 30.0%
TCATCATTATCGGATTATCA+TGG + chr3.1:91241755-91241774 None:intergenic 30.0%
TCCACTCTATAATATACCTT+TGG + chr3.1:91247020-91247039 None:intergenic 30.0%
TGACTTATCATCTGTCATAA+CGG + chr3.1:91241463-91241482 None:intergenic 30.0%
TGATGAAACATTGAACATAC+AGG - chr3.1:91246135-91246154 MS.gene52770:intron 30.0%
TTAAACTATCATTTGTGTGC+GGG - chr3.1:91246023-91246042 MS.gene52770:intron 30.0%
TTAAGATAGCAATGACTACA+AGG + chr3.1:91244500-91244519 None:intergenic 30.0%
TTGAATTGTGAGGTATAACT+GGG + chr3.1:91242313-91242332 None:intergenic 30.0%
TTGCATCTGGCAAAATATTA+TGG + chr3.1:91243852-91243871 None:intergenic 30.0%
TTTCGTCGAATTTGACAAAT+AGG - chr3.1:91244028-91244047 MS.gene52770:CDS 30.0%
! AAGAGAAGCACAAATTATTG+GGG - chr3.1:91242199-91242218 MS.gene52770:intron 30.0%
! AGAAAAATGATGGAAACTAG+AGG - chr3.1:91244184-91244203 MS.gene52770:CDS 30.0%
! AGAGTATCTTATGATTTCAC+AGG - chr3.1:91244869-91244888 MS.gene52770:intron 30.0%
! ATGATATTTTGCCACGTATT+CGG - chr3.1:91243302-91243321 MS.gene52770:intron 30.0%
! ATGATTTGTCATGTCAAAGT+TGG - chr3.1:91246918-91246937 MS.gene52770:intron 30.0%
! CATTTTCTTTCCAACATCTT+AGG - chr3.1:91242014-91242033 MS.gene52770:CDS 30.0%
! CTTTGAAAACATAGGAATCT+TGG - chr3.1:91241506-91241525 MS.gene52770:intron 30.0%
! GAAGAAGACTTTGAAAACAT+AGG - chr3.1:91241498-91241517 MS.gene52770:intron 30.0%
! GAAGAGAAGCACAAATTATT+GGG - chr3.1:91242198-91242217 MS.gene52770:intron 30.0%
! GAATATTGACATCTCTTTTG+TGG - chr3.1:91245317-91245336 MS.gene52770:intron 30.0%
! TCAGATATTTAAGATCTTCG+GGG + chr3.1:91243438-91243457 None:intergenic 30.0%
! TCCAAAGGTATATTATAGAG+TGG - chr3.1:91247016-91247035 MS.gene52770:intron 30.0%
! TGAAGAGAAGCACAAATTAT+TGG - chr3.1:91242197-91242216 MS.gene52770:intron 30.0%
! TGATTTGTCATGTCAAAGTT+GGG - chr3.1:91246919-91246938 MS.gene52770:intron 30.0%
! TTTAGGTTCAAACATAGTGA+TGG - chr3.1:91242341-91242360 MS.gene52770:CDS 30.0%
! TTTTCGATCAACATACAAGA+AGG - chr3.1:91241173-91241192 MS.gene52770:intron 30.0%
!! AAACAAGAAACTTGTTGTTC+TGG - chr3.1:91242985-91243004 MS.gene52770:intron 30.0%
!! AACAAGAAACTTGTTGTTCT+GGG - chr3.1:91242986-91243005 MS.gene52770:intron 30.0%
!! AATATTACTGATGGACTCAA+TGG - chr3.1:91243523-91243542 MS.gene52770:intron 30.0%
!! ACTTTTTAACTATGCCAACT+GGG - chr3.1:91243624-91243643 MS.gene52770:CDS 30.0%
!! ATGAAAAATGGATTTGCTAG+AGG - chr3.1:91244696-91244715 MS.gene52770:CDS 30.0%
!! TATTGGGGATTTTAATGGAT+GGG - chr3.1:91242214-91242233 MS.gene52770:intron 30.0%
!! TGTTCTGGGTTTAATTTTCT+AGG - chr3.1:91243000-91243019 MS.gene52770:intron 30.0%
!! TTATTGGGGATTTTAATGGA+TGG - chr3.1:91242213-91242232 MS.gene52770:intron 30.0%
!! TTTGATGGATTTCGATTTGA+TGG - chr3.1:91243700-91243719 MS.gene52770:CDS 30.0%
!!! CAAACATAGTGATGGATTTT+GGG - chr3.1:91242349-91242368 MS.gene52770:CDS 30.0%
!!! TCAAACATAGTGATGGATTT+TGG - chr3.1:91242348-91242367 MS.gene52770:CDS 30.0%
!!! TCATTTTGCTTATTTCTGAG+TGG - chr3.1:91245430-91245449 MS.gene52770:intron 30.0%
!!! TTTTATTTAGTTTGGCCATC+CGG - chr3.1:91245166-91245185 MS.gene52770:intron 30.0%
AAAAAAACCAGTTTGGCGTA+TGG - chr3.1:91242258-91242277 MS.gene52770:intron 35.0%
AACCTCGCATAAACTCTTAT+AGG - chr3.1:91243269-91243288 MS.gene52770:intron 35.0%
AACGCACAATAATTTCGACA+TGG + chr3.1:91243069-91243088 None:intergenic 35.0%
AACTTCACTCTTGAATTGTG+AGG + chr3.1:91242323-91242342 None:intergenic 35.0%
AATATTATGGACCAGACAGT+TGG + chr3.1:91243839-91243858 None:intergenic 35.0%
AATCAACATGGCATTTACAG+GGG - chr3.1:91243753-91243772 MS.gene52770:intron 35.0%
ACAACTGAATGTTTCCTCTT+TGG - chr3.1:91244996-91245015 MS.gene52770:intron 35.0%
ACATGCTGTCTATGAATAAG+CGG - chr3.1:91241387-91241406 MS.gene52770:CDS 35.0%
ACCACTTATAGGGTAAAATC+AGG + chr3.1:91246443-91246462 None:intergenic 35.0%
ACCTCGCATAAACTCTTATA+GGG - chr3.1:91243270-91243289 MS.gene52770:intron 35.0%
ACTAAATTATACAGCTGCCA+AGG - chr3.1:91241702-91241721 MS.gene52770:intron 35.0%
AGAATCTTACTTTCACACTG+GGG - chr3.1:91243570-91243589 MS.gene52770:intron 35.0%
AGACTATGAATGGTCAATGA+AGG - chr3.1:91244002-91244021 MS.gene52770:CDS 35.0%
AGGTGAATCATACAGTAACA+GGG + chr3.1:91244638-91244657 None:intergenic 35.0%
AGTGGCATATTTAATCCAAG+CGG + chr3.1:91242387-91242406 None:intergenic 35.0%
ATAAAACCAAACACACAACC+CGG + chr3.1:91246062-91246081 None:intergenic 35.0%
ATACAAAGAAATCTGCAGAC+GGG + chr3.1:91245502-91245521 None:intergenic 35.0%
ATAGAGGCTACCACAAATTA+TGG - chr3.1:91243593-91243612 MS.gene52770:intron 35.0%
ATATCTGCAGAACAAACAAG+AGG + chr3.1:91243173-91243192 None:intergenic 35.0%
ATCATTGCTGAAGATGTTTC+TGG - chr3.1:91243874-91243893 MS.gene52770:intron 35.0%
ATCCAGAGAATACATACGAA+GGG - chr3.1:91245989-91246008 MS.gene52770:intron 35.0%
CAACTGAATGTTTCCTCTTT+GGG - chr3.1:91244997-91245016 MS.gene52770:intron 35.0%
CAAGAATCTTACTTTCACAC+TGG - chr3.1:91243568-91243587 MS.gene52770:intron 35.0%
CACATGGAAAAAAACCAGTT+TGG - chr3.1:91242251-91242270 MS.gene52770:intron 35.0%
CCAGCATATTGCTGATAAAT+AGG - chr3.1:91244831-91244850 MS.gene52770:intron 35.0%
CCTATTTATCAGCAATATGC+TGG + chr3.1:91244834-91244853 None:intergenic 35.0%
CCTCATTGCCCATAAAATTA+AGG + chr3.1:91244574-91244593 None:intergenic 35.0%
CTCATTGAAGATTATGAAGG+AGG - chr3.1:91241603-91241622 MS.gene52770:intron 35.0%
CTGGATGAGTTCAAATTTGA+TGG - chr3.1:91243685-91243704 MS.gene52770:CDS 35.0%
CTTGAATTGTGAGGTATAAC+TGG + chr3.1:91242314-91242333 None:intergenic 35.0%
CTTGGCTATCATAATCCAAA+TGG - chr3.1:91241135-91241154 MS.gene52770:intron 35.0%
GAATCAACATGGCATTTACA+GGG - chr3.1:91243752-91243771 MS.gene52770:intron 35.0%
GACAGATGATAAGTCAACAA+TGG - chr3.1:91241467-91241486 MS.gene52770:intron 35.0%
GAGTATTAAGAAGGATGTTC+AGG - chr3.1:91241246-91241265 MS.gene52770:intron 35.0%
GATGATACACTTCTTAACCA+TGG - chr3.1:91244529-91244548 MS.gene52770:CDS 35.0%
GATTCTTTATAAGCATGCGA+TGG + chr3.1:91240977-91240996 None:intergenic 35.0%
GCATATTGCTGATAAATAGG+AGG - chr3.1:91244834-91244853 MS.gene52770:intron 35.0%
GGATTTAACAGAGAAGAAGA+TGG - chr3.1:91242050-91242069 MS.gene52770:CDS 35.0%
GTCTACTATCCCATAATTTG+TGG + chr3.1:91243606-91243625 None:intergenic 35.0%
TAAAATATGACTGCATGTGG+TGG + chr3.1:91242944-91242963 None:intergenic 35.0%
TAGAGGCTACCACAAATTAT+GGG - chr3.1:91243594-91243613 MS.gene52770:intron 35.0%
TAGGTTATAGTCTTTGAACG+TGG - chr3.1:91245940-91245959 MS.gene52770:CDS 35.0%
TCATAATCCAAATGGATGCA+AGG - chr3.1:91241143-91241162 MS.gene52770:intron 35.0%
TCATCATCATGGAATCAACA+TGG - chr3.1:91243741-91243760 MS.gene52770:intron 35.0%
TGATAAGTCAACAATGGCAT+CGG - chr3.1:91241473-91241492 MS.gene52770:intron 35.0%
TGTAAGTCTTCACACTTCAA+GGG + chr3.1:91244919-91244938 None:intergenic 35.0%
TTGTAAGTCTTCACACTTCA+AGG + chr3.1:91244920-91244939 None:intergenic 35.0%
TTGTTCTCTGTAGAAACATC+AGG + chr3.1:91247125-91247144 None:intergenic 35.0%
! AAAACGCCTTACTAGTTTGT+TGG - chr3.1:91241952-91241971 MS.gene52770:intron 35.0%
! AAATTTGTTTCAGGAACTCC+TGG + chr3.1:91246605-91246624 None:intergenic 35.0%
! AAGATGCTGCTTATTTGTTG+AGG + chr3.1:91241088-91241107 None:intergenic 35.0%
! AGAGGGCTACCTTAATTTTA+TGG - chr3.1:91244562-91244581 MS.gene52770:CDS 35.0%
! ATGTTTCCTCTTTGGGTTTA+TGG - chr3.1:91245004-91245023 MS.gene52770:intron 35.0%
! CAATGTGTTTTCCCACAATT+AGG - chr3.1:91241413-91241432 MS.gene52770:CDS 35.0%
! CAGATATTTAAGATCTTCGG+GGG + chr3.1:91243437-91243456 None:intergenic 35.0%
! CCTTAATTTTATGGGCAATG+AGG - chr3.1:91244571-91244590 MS.gene52770:CDS 35.0%
! GAGGGCTACCTTAATTTTAT+GGG - chr3.1:91244563-91244582 MS.gene52770:CDS 35.0%
! GTGTTGTGTGTTTGTTAGTT+TGG - chr3.1:91244737-91244756 MS.gene52770:CDS 35.0%
! TCAAAGTTGGGTTTGAGTTA+TGG - chr3.1:91246931-91246950 MS.gene52770:intron 35.0%
! TCCTGATTTTACCCTATAAG+TGG - chr3.1:91246439-91246458 MS.gene52770:CDS 35.0%
! TGATATTTTGCCACGTATTC+GGG - chr3.1:91243303-91243322 MS.gene52770:intron 35.0%
! TGTGCGTTTTGTAATCTACT+TGG - chr3.1:91243081-91243100 MS.gene52770:intron 35.0%
! TGTTTCCTCTTTGGGTTTAT+GGG - chr3.1:91245005-91245024 MS.gene52770:intron 35.0%
! TTTTAGTGAAGCAACTGATG+TGG - chr3.1:91243789-91243808 MS.gene52770:intron 35.0%
!! AAAAATGGATTTGCTAGAGG+TGG - chr3.1:91244699-91244718 MS.gene52770:CDS 35.0%
!! ACGCTGAAAGAGTATTAAGA+AGG - chr3.1:91241237-91241256 MS.gene52770:intron 35.0%
!! CAATCTGTTTTGTTGATGCA+AGG + chr3.1:91245651-91245670 None:intergenic 35.0%
!! GACTTTTTAACTATGCCAAC+TGG - chr3.1:91243623-91243642 MS.gene52770:CDS 35.0%
!! TAGTTATTTTCCCGAATACG+TGG + chr3.1:91243316-91243335 None:intergenic 35.0%
!! TGCAACTTGCTGATGAAAAA+TGG - chr3.1:91244684-91244703 MS.gene52770:CDS 35.0%
!!! ACTGGTTTTTTTCCATGTGA+TGG + chr3.1:91242250-91242269 None:intergenic 35.0%
!!! GTTTTTTTCCATGTGATGGT+TGG + chr3.1:91242246-91242265 None:intergenic 35.0%
AAACATGCAAACCTAGGCTA+TGG + chr3.1:91243471-91243490 None:intergenic 40.0%
AAATATTACGTGGTGAGTGG+TGG + chr3.1:91240872-91240891 None:intergenic 40.0%
AACATGCAAACCTAGGCTAT+GGG + chr3.1:91243470-91243489 None:intergenic 40.0%
AACCAGAACTGACCTAATTG+TGG + chr3.1:91241428-91241447 None:intergenic 40.0%
AATCAACTAGGAGTGGACAA+TGG + chr3.1:91245876-91245895 None:intergenic 40.0%
AATGAACCTTGACTACAAGG+TGG + chr3.1:91244946-91244965 None:intergenic 40.0%
ACAAAGATCATACTTGGTCG+TGG + chr3.1:91244089-91244108 None:intergenic 40.0%
ACATGAGCTTCATATATCCG+TGG + chr3.1:91243232-91243251 None:intergenic 40.0%
ACCAGAACTGACCTAATTGT+GGG + chr3.1:91241427-91241446 None:intergenic 40.0%
ACGGATATATGAAGCTCATG+TGG - chr3.1:91243231-91243250 MS.gene52770:intron 40.0%
ACGTAGTCAATCCACTTATC+AGG + chr3.1:91243970-91243989 None:intergenic 40.0%
ACTCCAGTCTTGATCAAGTT+TGG - chr3.1:91243120-91243139 MS.gene52770:intron 40.0%
AGAAAGCAACAGTGCCAATT+TGG - chr3.1:91247052-91247071 MS.gene52770:intron 40.0%
AGATTATGAAGGAGGTCTTG+AGG - chr3.1:91241611-91241630 MS.gene52770:intron 40.0%
AGTGACTGTTACTCTACTAG+TGG - chr3.1:91244768-91244787 MS.gene52770:CDS 40.0%
AGTTGACGTCTACCACTTAT+AGG + chr3.1:91246454-91246473 None:intergenic 40.0%
ATCTGGCATGCAGTTAACTT+AGG - chr3.1:91241829-91241848 MS.gene52770:CDS 40.0%
ATTAAGATCCCTGATGCTGA+TGG - chr3.1:91242284-91242303 MS.gene52770:intron 40.0%
CACTTCTTAACCATGGCATT+AGG - chr3.1:91244536-91244555 MS.gene52770:CDS 40.0%
CAGCACTAACAATGAAGACA+AGG - chr3.1:91245675-91245694 MS.gene52770:CDS 40.0%
CAGGTGAATCATACAGTAAC+AGG + chr3.1:91244639-91244658 None:intergenic 40.0%
CATCCAAACTTGATCAAGAC+TGG + chr3.1:91243126-91243145 None:intergenic 40.0%
CATCCAGAGAATACATACGA+AGG - chr3.1:91245988-91246007 MS.gene52770:intron 40.0%
CATGTGTGACTCAAAGATGA+AGG + chr3.1:91242754-91242773 None:intergenic 40.0%
CCATCAAAACATGCAAACCT+AGG + chr3.1:91243477-91243496 None:intergenic 40.0%
CGGATATATGAAGCTCATGT+GGG - chr3.1:91243232-91243251 MS.gene52770:intron 40.0%
CGTAGTCAATCCACTTATCA+GGG + chr3.1:91243969-91243988 None:intergenic 40.0%
CTATAATACAGTCCAGCTGA+TGG - chr3.1:91243333-91243352 MS.gene52770:intron 40.0%
GAAAGCAACAGTGCCAATTT+GGG - chr3.1:91247053-91247072 MS.gene52770:intron 40.0%
GATAGTGATGCTCAGGAATT+TGG - chr3.1:91246203-91246222 MS.gene52770:intron 40.0%
GGAATCAACATGGCATTTAC+AGG - chr3.1:91243751-91243770 MS.gene52770:intron 40.0%
GGTCTTGAGGAATTTGCAAA+AGG - chr3.1:91241624-91241643 MS.gene52770:intron 40.0%
GTGGCATATTTAATCCAAGC+GGG + chr3.1:91242386-91242405 None:intergenic 40.0%
GTTCAGGGTTAATGATCGAA+AGG - chr3.1:91241262-91241281 MS.gene52770:intron 40.0%
GTTGACGTCTACCACTTATA+GGG + chr3.1:91246453-91246472 None:intergenic 40.0%
TAATCGACCCAATTCCTTCA+AGG - chr3.1:91246628-91246647 MS.gene52770:intron 40.0%
TACAAAGAAATCTGCAGACG+GGG + chr3.1:91245501-91245520 None:intergenic 40.0%
TACAGATCACCTGAGATACA+AGG - chr3.1:91245262-91245281 MS.gene52770:intron 40.0%
TACCCTTCGTATGTATTCTC+TGG + chr3.1:91245994-91246013 None:intergenic 40.0%
TCAAACACCTTGCATCCATT+TGG + chr3.1:91241153-91241172 None:intergenic 40.0%
TCAGCAATGATAGTTGCATC+TGG + chr3.1:91243865-91243884 None:intergenic 40.0%
TCATATATCCGTGGAGCTTT+GGG + chr3.1:91243223-91243242 None:intergenic 40.0%
TCCCTATAAGAGTTTATGCG+AGG + chr3.1:91243274-91243293 None:intergenic 40.0%
TCTGGCATGCAGTTAACTTA+GGG - chr3.1:91241830-91241849 MS.gene52770:CDS 40.0%
TCTTATGATTTCACAGGCGT+TGG - chr3.1:91244875-91244894 MS.gene52770:intron 40.0%
TGAGGCAACATGTGTAACTT+TGG - chr3.1:91246383-91246402 MS.gene52770:CDS 40.0%
TGCAGTTATGACCAAAACCT+TGG + chr3.1:91241722-91241741 None:intergenic 40.0%
TGCGGGTAATTTATTTGTGC+CGG - chr3.1:91246040-91246059 MS.gene52770:intron 40.0%
TGCTGTTGTCTATTTGATGC+TGG - chr3.1:91243813-91243832 MS.gene52770:intron 40.0%
TGCTTGAAATCAACTAGGAG+TGG + chr3.1:91245883-91245902 None:intergenic 40.0%
TGCTTTCAAAGCACATACTC+TGG - chr3.1:91245065-91245084 MS.gene52770:intron 40.0%
TGGCATATTTAATCCAAGCG+GGG + chr3.1:91242385-91242404 None:intergenic 40.0%
TTCATATATCCGTGGAGCTT+TGG + chr3.1:91243224-91243243 None:intergenic 40.0%
TTCTTAACCATGGCATTAGG+TGG - chr3.1:91244539-91244558 MS.gene52770:CDS 40.0%
TTGCTGATAAATAGGAGGAG+AGG - chr3.1:91244839-91244858 MS.gene52770:intron 40.0%
TTGTTGAGGTCTGCCATAAA+AGG + chr3.1:91241074-91241093 None:intergenic 40.0%
! ACCATTTTCCACTTCTAGGT+GGG - chr3.1:91246542-91246561 MS.gene52770:CDS 40.0%
! ATCTAATTTAAGGTGGTGGC+TGG - chr3.1:91243666-91243685 MS.gene52770:CDS 40.0%
! GTTGACCATTTTCCACTTCT+AGG - chr3.1:91246538-91246557 MS.gene52770:CDS 40.0%
! TAATGGGACCTTTCTGAAAG+TGG + chr3.1:91242461-91242480 None:intergenic 40.0%
! TCTTTTGTGGCTTCGTTTCT+TGG - chr3.1:91245330-91245349 MS.gene52770:intron 40.0%
! TGGATTGATTTCCCAAGAGA+AGG - chr3.1:91245191-91245210 MS.gene52770:intron 40.0%
! TTATACAGCTGCCAAGGTTT+TGG - chr3.1:91241708-91241727 MS.gene52770:intron 40.0%
! TTTGCTGTGAGTAGTAGATC+TGG - chr3.1:91243409-91243428 MS.gene52770:intron 40.0%
!! AATAGTCTTGTCCCCAACAA+TGG + chr3.1:91244289-91244308 None:intergenic 40.0%
!! CCTAGGTTTGCATGTTTTGA+TGG - chr3.1:91243474-91243493 MS.gene52770:intron 40.0%
!! TAGGTCAGTTCTGGTTTCAA+GGG - chr3.1:91241432-91241451 MS.gene52770:CDS 40.0%
!! TTAGGTCAGTTCTGGTTTCA+AGG - chr3.1:91241431-91241450 MS.gene52770:CDS 40.0%
!! TTTTGACTATCGACTAGCCA+TGG - chr3.1:91243939-91243958 MS.gene52770:CDS 40.0%
AAATCTGGTAGGATCGACAG+TGG + chr3.1:91242405-91242424 None:intergenic 45.0%
AATCTGCAGACGGGGAAATA+AGG + chr3.1:91245493-91245512 None:intergenic 45.0%
ACACAGCCAAGTACTAGTTG+AGG + chr3.1:91241784-91241803 None:intergenic 45.0%
AGCAACCCATAAACCCAAAG+AGG + chr3.1:91245013-91245032 None:intergenic 45.0%
AGTCTTTGAACGTGGTGATC+TGG - chr3.1:91245948-91245967 MS.gene52770:CDS 45.0%
AGTGATGCTCAGGAATTTGG+AGG - chr3.1:91246206-91246225 MS.gene52770:intron 45.0%
AGTGCAACTCTGTATTTCCC+AGG + chr3.1:91246182-91246201 None:intergenic 45.0%
ATAGATAAGGCCCATAGCCT+AGG - chr3.1:91243457-91243476 MS.gene52770:CDS 45.0%
ATCAGTATCTGCTGCAGCAA+AGG + chr3.1:91247090-91247109 None:intergenic 45.0%
CAACTACCACCTTGTAGTCA+AGG - chr3.1:91244937-91244956 MS.gene52770:intron 45.0%
CAAGCAAAAGCCTGTACATG+TGG - chr3.1:91241110-91241129 MS.gene52770:intron 45.0%
CATACAGTAACAGGGAGCAA+CGG + chr3.1:91244630-91244649 None:intergenic 45.0%
CTTCTCCTACTATTGACCGA+GGG - chr3.1:91244364-91244383 MS.gene52770:CDS 45.0%
CTTGGGAAATCAATCCACTC+CGG + chr3.1:91245188-91245207 None:intergenic 45.0%
GAAACGAAGAACTTCCCAGT+TGG + chr3.1:91243641-91243660 None:intergenic 45.0%
GACTGTTACTCTACTAGTGG+CGG - chr3.1:91244771-91244790 MS.gene52770:CDS 45.0%
GAGAGGACCTTGAAGGAATT+GGG + chr3.1:91246638-91246657 None:intergenic 45.0%
GAGATAACTTACTGAGCAGC+AGG + chr3.1:91242098-91242117 None:intergenic 45.0%
GATCAGATCACATACCACAC+AGG + chr3.1:91246672-91246691 None:intergenic 45.0%
GATGGAGTTACGAGAAATGC+AGG - chr3.1:91245219-91245238 MS.gene52770:intron 45.0%
GATTTCCCAAGAGAAGGCAA+TGG - chr3.1:91245197-91245216 MS.gene52770:intron 45.0%
GCGGGTAATTTATTTGTGCC+GGG - chr3.1:91246041-91246060 MS.gene52770:intron 45.0%
GGACTCTTCTACACCCAAAT+TGG + chr3.1:91247069-91247088 None:intergenic 45.0%
GGCAACATGTGTAACTTTGG+AGG - chr3.1:91246386-91246405 MS.gene52770:CDS 45.0%
GGCAATGTTGAAAGCGAAAG+AGG + chr3.1:91240848-91240867 None:intergenic 45.0%
GGGAAATATTACGTGGTGAG+TGG + chr3.1:91240875-91240894 None:intergenic 45.0%
GTAAGGAGCCCTAATCTTTC+TGG - chr3.1:91246239-91246258 MS.gene52770:intron 45.0%
TAAGCATGCGATGGTGTTTG+TGG + chr3.1:91240968-91240987 None:intergenic 45.0%
TAATGCTCCATACGCCAAAC+TGG + chr3.1:91242268-91242287 None:intergenic 45.0%
TACTTTCACACTGGGGATAG+AGG - chr3.1:91243577-91243596 MS.gene52770:intron 45.0%
TCCATCCATTGCCTTCTCTT+GGG + chr3.1:91245205-91245224 None:intergenic 45.0%
TCCCACAATTAGGTCAGTTC+TGG - chr3.1:91241423-91241442 MS.gene52770:CDS 45.0%
TCCCACCTAGAAGTGGAAAA+TGG + chr3.1:91246546-91246565 None:intergenic 45.0%
TGGGAAATACAGAGTTGCAC+TGG - chr3.1:91246181-91246200 MS.gene52770:intron 45.0%
TGGTGCATAATTCTACTCCG+TGG - chr3.1:91245450-91245469 MS.gene52770:intron 45.0%
TGTGGCTTCGTTTCTTGGTT+GGG - chr3.1:91245335-91245354 MS.gene52770:intron 45.0%
TTGGAGGACATGGAAGAGTA+AGG - chr3.1:91246222-91246241 MS.gene52770:intron 45.0%
TTGTGGCTTCGTTTCTTGGT+TGG - chr3.1:91245334-91245353 MS.gene52770:intron 45.0%
! AAAATTGGGTGTGACTTGCC+TGG - chr3.1:91246161-91246180 MS.gene52770:intron 45.0%
! AAATTGGGTGTGACTTGCCT+GGG - chr3.1:91246162-91246181 MS.gene52770:intron 45.0%
! AACAGGGAGCAACGGTTTTT+CGG + chr3.1:91244622-91244641 None:intergenic 45.0%
! AACTTTGAAGGACGGACTTG+AGG + chr3.1:91246286-91246305 None:intergenic 45.0%
! ACTTTGAAGGACGGACTTGA+GGG + chr3.1:91246285-91246304 None:intergenic 45.0%
! GACCATTTTCCACTTCTAGG+TGG - chr3.1:91246541-91246560 MS.gene52770:CDS 45.0%
!! ATTTCACAGGCGTTGGAACT+AGG - chr3.1:91244882-91244901 MS.gene52770:intron 45.0%
!! GGACTCAATGGCTTTGATGT+GGG - chr3.1:91243535-91243554 MS.gene52770:intron 45.0%
!! GGGGATTTTAATGGATGGGA+TGG - chr3.1:91242218-91242237 MS.gene52770:intron 45.0%
!! TGGACTCAATGGCTTTGATG+TGG - chr3.1:91243534-91243553 MS.gene52770:intron 45.0%
!! TGGCACTGTTGCTTTCTTCT+TGG + chr3.1:91247049-91247068 None:intergenic 45.0%
AACCATGGCATTAGGTGGAG+AGG - chr3.1:91244544-91244563 MS.gene52770:CDS 50.0%
AACTCCTGGTATGCCTTCTG+GGG + chr3.1:91246591-91246610 None:intergenic 50.0%
AAGCCTGTACATGTGGCACT+TGG - chr3.1:91241117-91241136 MS.gene52770:intron 50.0%
ACCATGGCATTAGGTGGAGA+GGG - chr3.1:91244545-91244564 MS.gene52770:CDS 50.0%
ACTGGGTTTCCATCAGCATC+AGG + chr3.1:91242296-91242315 None:intergenic 50.0%
ATACCACACAGGTACGAGGT+GGG + chr3.1:91246661-91246680 None:intergenic 50.0%
CATCATGTCCCACCTAGAAG+TGG + chr3.1:91246553-91246572 None:intergenic 50.0%
CCACTTATCAGGGATAGCCA+TGG + chr3.1:91243959-91243978 None:intergenic 50.0%
CCATGGCTATCCCTGATAAG+TGG - chr3.1:91243956-91243975 MS.gene52770:CDS 50.0%
CCTTGTGAAGAGCAATCCCT+CGG + chr3.1:91244383-91244402 None:intergenic 50.0%
CTCCATCCATTGCCTTCTCT+TGG + chr3.1:91245206-91245225 None:intergenic 50.0%
CTCTTGGGCAGTCCATTGTT+GGG - chr3.1:91244274-91244293 MS.gene52770:CDS 50.0%
CTGGGTTTCCATCAGCATCA+GGG + chr3.1:91242295-91242314 None:intergenic 50.0%
GAAATGGGTAGCCTAGTGTG+TGG - chr3.1:91241208-91241227 MS.gene52770:intron 50.0%
GAACTCCTGGTATGCCTTCT+GGG + chr3.1:91246592-91246611 None:intergenic 50.0%
GCAATCCCTCGGTCAATAGT+AGG + chr3.1:91244372-91244391 None:intergenic 50.0%
GCTCAGGAATTTGGAGGACA+TGG - chr3.1:91246212-91246231 MS.gene52770:intron 50.0%
GCTTCTCCTACTATTGACCG+AGG - chr3.1:91244363-91244382 MS.gene52770:CDS 50.0%
GGAAATCAATCCACTCCGGA+TGG + chr3.1:91245184-91245203 None:intergenic 50.0%
GGAGAGGACCTTGAAGGAAT+TGG + chr3.1:91246639-91246658 None:intergenic 50.0%
GGATGGTTCCAACCATCACA+TGG - chr3.1:91242235-91242254 MS.gene52770:intron 50.0%
GGGATCCACCACTTTCAGAA+AGG - chr3.1:91242450-91242469 MS.gene52770:intron 50.0%
GGTAGCCTAGTGTGTGGATT+GGG - chr3.1:91241214-91241233 MS.gene52770:intron 50.0%
TAGCCAAGTGCCACATGTAC+AGG + chr3.1:91241123-91241142 None:intergenic 50.0%
TATTACGTGGTGAGTGGTGG+AGG + chr3.1:91240869-91240888 None:intergenic 50.0%
TCACATACCACACAGGTACG+AGG + chr3.1:91246665-91246684 None:intergenic 50.0%
TCCCAAGAGAAGGCAATGGA+TGG - chr3.1:91245201-91245220 MS.gene52770:intron 50.0%
TCTCTTGGGCAGTCCATTGT+TGG - chr3.1:91244273-91244292 MS.gene52770:CDS 50.0%
TCTTGGGCAGTCCATTGTTG+GGG - chr3.1:91244275-91244294 MS.gene52770:CDS 50.0%
TGCACTGGATAGTGATGCTC+AGG - chr3.1:91246196-91246215 MS.gene52770:intron 50.0%
TGTTACTCTACTAGTGGCGG+AGG - chr3.1:91244774-91244793 MS.gene52770:CDS 50.0%
TTTGATGCTGGCCAACTGTC+TGG - chr3.1:91243825-91243844 MS.gene52770:intron 50.0%
TTTGTGCCGGGTTGTGTGTT+TGG - chr3.1:91246053-91246072 MS.gene52770:intron 50.0%
! ACAGGGAGCAACGGTTTTTC+GGG + chr3.1:91244621-91244640 None:intergenic 50.0%
! TGGGACCTTTCTGAAAGTGG+TGG + chr3.1:91242458-91242477 None:intergenic 50.0%
!! GAAGATGTTTCTGGCATGCC+TGG - chr3.1:91243883-91243902 MS.gene52770:intron 50.0%
!! TTTAGTTTGGCCATCCGGAG+TGG - chr3.1:91245171-91245190 MS.gene52770:intron 50.0%
ACCCTACGACGGTGTCTACT+GGG - chr3.1:91242430-91242449 MS.gene52770:intron 55.0%
ACGAGAAATGCAGGCGTCAG+TGG - chr3.1:91245228-91245247 MS.gene52770:intron 55.0%
AGATTTGCCGCACCCTACGA+CGG - chr3.1:91242419-91242438 MS.gene52770:intron 55.0%
AGCGTCCCAATCCACACACT+AGG + chr3.1:91241222-91241241 None:intergenic 55.0%
AGTCCAGCTGATGGCTGTGA+TGG - chr3.1:91243342-91243361 MS.gene52770:intron 55.0%
ATCCCAGTAGACACCGTCGT+AGG + chr3.1:91242435-91242454 None:intergenic 55.0%
ATGGCGTTGTGTACCGTGAG+TGG - chr3.1:91242069-91242088 MS.gene52770:intron 55.0%
CAGGCGTCAGTGGAATCTTG+TGG - chr3.1:91245238-91245257 MS.gene52770:intron 55.0%
CATACCACACAGGTACGAGG+TGG + chr3.1:91246662-91246681 None:intergenic 55.0%
CCAATTCCCGCCTCAGAAAC+TGG + chr3.1:91243919-91243938 None:intergenic 55.0%
CCGAGGGATTGCTCTTCACA+AGG - chr3.1:91244380-91244399 MS.gene52770:CDS 55.0%
CGCACGCTACCTTGTATCTC+AGG + chr3.1:91245274-91245293 None:intergenic 55.0%
GACCACTTCACATCCCCAGA+AGG - chr3.1:91246575-91246594 MS.gene52770:intron 55.0%
GGAACTCCTGGTATGCCTTC+TGG + chr3.1:91246593-91246612 None:intergenic 55.0%
GGGTAGCCTAGTGTGTGGAT+TGG - chr3.1:91241213-91241232 MS.gene52770:intron 55.0%
TACCACACAGGTACGAGGTG+GGG + chr3.1:91246660-91246679 None:intergenic 55.0%
TAGGGTGCGGCAAATCTGGT+AGG + chr3.1:91242416-91242435 None:intergenic 55.0%
TCCCAGTAGACACCGTCGTA+GGG + chr3.1:91242434-91242453 None:intergenic 55.0%
TGGCGTTGTGTACCGTGAGT+GGG - chr3.1:91242070-91242089 MS.gene52770:intron 55.0%
TTCCCGCCTCAGAAACTGGT+CGG + chr3.1:91243915-91243934 None:intergenic 55.0%
! ACATCCCCAGAAGGCATACC+AGG - chr3.1:91246584-91246603 MS.gene52770:intron 55.0%
! TGCCTTCTGGGGATGTGAAG+TGG + chr3.1:91246580-91246599 None:intergenic 55.0%
!! ATCCGTGGAGCTTTGGGCTT+CGG + chr3.1:91243217-91243236 None:intergenic 55.0%
!! CACAGGCGTTGGAACTAGGT+AGG - chr3.1:91244886-91244905 MS.gene52770:intron 55.0%
!! CCAGTTTCTGAGGCGGGAAT+TGG - chr3.1:91243916-91243935 MS.gene52770:intron 55.0%
!! GTTTCTGGCATGCCTGGACT+CGG - chr3.1:91243889-91243908 MS.gene52770:intron 55.0%
ACTCGGCCGACCAGTTTCTG+AGG - chr3.1:91243906-91243925 MS.gene52770:intron 60.0%
AGGTGGGGAGAGGACCTTGA+AGG + chr3.1:91246645-91246664 None:intergenic 60.0%
CACCCTACGACGGTGTCTAC+TGG - chr3.1:91242429-91242448 MS.gene52770:intron 60.0%
CACCGAAGCCCAAAGCTCCA+CGG - chr3.1:91243212-91243231 MS.gene52770:intron 60.0%
GCCCTCTCCACCTAATGCCA+TGG + chr3.1:91244549-91244568 None:intergenic 60.0%
GCTCCATCACAGCCATCAGC+TGG + chr3.1:91243348-91243367 None:intergenic 60.0%
GTAGACACCGTCGTAGGGTG+CGG + chr3.1:91242429-91242448 None:intergenic 60.0%
GTCGTAGGGTGCGGCAAATC+TGG + chr3.1:91242420-91242439 None:intergenic 60.0%
!! AGCTTTGGGCTTCGGTGGAC+GGG + chr3.1:91243209-91243228 None:intergenic 60.0%
!! GAGCTTTGGGCTTCGGTGGA+CGG + chr3.1:91243210-91243229 None:intergenic 60.0%
CACAGGTACGAGGTGGGGAG+AGG + chr3.1:91246655-91246674 None:intergenic 65.0%
CTCCCCACCTCGTACCTGTG+TGG - chr3.1:91246655-91246674 MS.gene52770:intron 65.0%
GAAACTGGTCGGCCGAGTCC+AGG + chr3.1:91243904-91243923 None:intergenic 65.0%
GAGCAGCAGGTGCCCACTCA+CGG + chr3.1:91242085-91242104 None:intergenic 65.0%
! CGGCCGACCAGTTTCTGAGG+CGG - chr3.1:91243909-91243928 MS.gene52770:intron 65.0%
! GCTTTGGGCTTCGGTGGACG+GGG + chr3.1:91243208-91243227 None:intergenic 65.0%
! GGGTTGATCGCATCCCCGCT+TGG - chr3.1:91242369-91242388 MS.gene52770:CDS 65.0%
!! CGTGGAGCTTTGGGCTTCGG+TGG + chr3.1:91243214-91243233 None:intergenic 65.0%
!! GGCCGACCAGTTTCTGAGGC+GGG - chr3.1:91243910-91243929 MS.gene52770:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 91240838 91247175 91240838 ID=MS.gene52770
chr3.1 mRNA 91240838 91247175 91240838 ID=MS.gene52770.t1;Parent=MS.gene52770
chr3.1 exon 91247131 91247175 91247131 ID=MS.gene52770.t1.exon1;Parent=MS.gene52770.t1
chr3.1 CDS 91247131 91247175 91247131 ID=cds.MS.gene52770.t1;Parent=MS.gene52770.t1
chr3.1 exon 91246819 91246929 91246819 ID=MS.gene52770.t1.exon2;Parent=MS.gene52770.t1
chr3.1 CDS 91246819 91246929 91246819 ID=cds.MS.gene52770.t1;Parent=MS.gene52770.t1
chr3.1 exon 91246368 91246578 91246368 ID=MS.gene52770.t1.exon3;Parent=MS.gene52770.t1
chr3.1 CDS 91246368 91246578 91246368 ID=cds.MS.gene52770.t1;Parent=MS.gene52770.t1
chr3.1 exon 91245908 91245977 91245908 ID=MS.gene52770.t1.exon4;Parent=MS.gene52770.t1
chr3.1 CDS 91245908 91245977 91245908 ID=cds.MS.gene52770.t1;Parent=MS.gene52770.t1
chr3.1 exon 91245542 91245811 91245542 ID=MS.gene52770.t1.exon5;Parent=MS.gene52770.t1
chr3.1 CDS 91245542 91245811 91245542 ID=cds.MS.gene52770.t1;Parent=MS.gene52770.t1
chr3.1 exon 91243918 91244824 91243918 ID=MS.gene52770.t1.exon6;Parent=MS.gene52770.t1
chr3.1 CDS 91243918 91244824 91243918 ID=cds.MS.gene52770.t1;Parent=MS.gene52770.t1
chr3.1 exon 91243612 91243728 91243612 ID=MS.gene52770.t1.exon7;Parent=MS.gene52770.t1
chr3.1 CDS 91243612 91243728 91243612 ID=cds.MS.gene52770.t1;Parent=MS.gene52770.t1
chr3.1 exon 91243421 91243483 91243421 ID=MS.gene52770.t1.exon8;Parent=MS.gene52770.t1
chr3.1 CDS 91243421 91243483 91243421 ID=cds.MS.gene52770.t1;Parent=MS.gene52770.t1
chr3.1 exon 91242730 91242837 91242730 ID=MS.gene52770.t1.exon9;Parent=MS.gene52770.t1
chr3.1 CDS 91242730 91242837 91242730 ID=cds.MS.gene52770.t1;Parent=MS.gene52770.t1
chr3.1 exon 91242317 91242418 91242317 ID=MS.gene52770.t1.exon10;Parent=MS.gene52770.t1
chr3.1 CDS 91242317 91242418 91242317 ID=cds.MS.gene52770.t1;Parent=MS.gene52770.t1
chr3.1 exon 91242003 91242070 91242003 ID=MS.gene52770.t1.exon11;Parent=MS.gene52770.t1
chr3.1 CDS 91242003 91242070 91242003 ID=cds.MS.gene52770.t1;Parent=MS.gene52770.t1
chr3.1 exon 91241775 91241856 91241775 ID=MS.gene52770.t1.exon12;Parent=MS.gene52770.t1
chr3.1 CDS 91241775 91241856 91241775 ID=cds.MS.gene52770.t1;Parent=MS.gene52770.t1
chr3.1 exon 91241337 91241453 91241337 ID=MS.gene52770.t1.exon13;Parent=MS.gene52770.t1
chr3.1 CDS 91241337 91241453 91241337 ID=cds.MS.gene52770.t1;Parent=MS.gene52770.t1
chr3.1 exon 91240838 91240990 91240838 ID=MS.gene52770.t1.exon14;Parent=MS.gene52770.t1
chr3.1 CDS 91240838 91240990 91240838 ID=cds.MS.gene52770.t1;Parent=MS.gene52770.t1
Gene Sequence

>MS.gene52770

ATGATTTCCTCTTTCGCTTTCAACATTGCCTCCACCACTCACCACGTAATATTTCCCTTTTTTGTTACTTTGTTGTAATTTTTAATTTCTTTTAGATTAAAAAAGGTACTGAGCTTAATTTTACTTACCACAAACACCATCGCATGCTTATAAAGAATCAAAATTTCGAGATTAAAGTAAAACTCAAACATTTGTGCTTGTAATTTGGATCTCTACAGTTACTTACTTTGATTCCTTTTATGGCAGACCTCAACAAATAAGCAGCATCTTGTCAAGCAAAAGCCTGTACATGTGGCACTTGGCTATCATAATCCAAATGGATGCAAGGTGTTTGATTTTCGATCAACATACAAGAAGGTATATTTGTTAAGAAATGGGTAGCCTAGTGTGTGGATTGGGACGCTGAAAGAGTATTAAGAAGGATGTTCAGGGTTAATGATCGAAAGGAAATTAATGAAAATAATATGAAACATTTTCACTCTAGTCTGACTGATTTGCTGCATGTTTAAAAGAAAAATGATAGTTTGTATATCTATTATCACATATGCAACATGCTGTCTATGAATAAGCGGTTTCAATGTGTTTTCCCACAATTAGGTCAGTTCTGGTTTCAAGGGTGTAGCCGTTATGACAGATGATAAGTCAACAATGGCATCGGTTGAAGAAGACTTTGAAAACATAGGAATCTTGGATGTTGATTCATCCCTTAAACCATTCAAAGATCACTTCAAATTTAGACTGAAGAAGTATTTAGATCAGAAAAAGCTCATTGAAGATTATGAAGGAGGTCTTGAGGAATTTGCAAAAGGTGATTATAATTGTTGACAATTCACATTGTTTCATTTCTTATATATAATTGTGCATACTAAATTATACAGCTGCCAAGGTTTTGGTCATAACTGCAAATTATATGTCCATGATAATCCGATAATGATGAAATATTCCTCAACTAGTACTTGGCTGTGTCTGTGTTTGATAATCATATTACATCATCTGGCATGCAGTTAACTTAGGGTAATGTAAATTTGTGCAAGCACAATTGATCGATTATGTTTGGACACATCAGCCTCTTGAAAATAAAGTCATTTGTCTGTCAATTGGATTGATTTCTATTAAAACGCCTTACTAGTTTGTTGGATTAATTTTAATTACATCTTTAATATAATGTTTCCTTATCATTTTCTTTCCAACATCTTAGGTTATTTGAAATTTGGATTTAACAGAGAAGAAGATGGCGTTGTGTACCGTGAGTGGGCACCTGCTGCTCAGTAAGTTATCTCAAAGAATACAAGTTAGTCAAACTTATTTGTCACAGTTTAACTATCTTTTCTTTTCCTTTCTGATTTTGAATCTTTTCAATGAAGAGAAGCACAAATTATTGGGGATTTTAATGGATGGGATGGTTCCAACCATCACATGGAAAAAAACCAGTTTGGCGTATGGAGCATTAAGATCCCTGATGCTGATGGAAACCCAGTTATACCTCACAATTCAAGAGTGAAGTTTAGGTTCAAACATAGTGATGGATTTTGGGTTGATCGCATCCCCGCTTGGATTAAATATGCCACTGTCGATCCTACCAGATTTGCCGCACCCTACGACGGTGTCTACTGGGATCCACCACTTTCAGAAAGGTCCCATTATTTACATATGTAGAATATCTGATGAAGTGTCATCTTCAGTAAAAAAATCATTGCATTTGAGATATCAATGCTAAAAGGGACTCTAATGTATGCCACATATTAGTATTAGCTGACTTTTAAATTACGCAAATAATTTCTGAAAGTCTTGAAAATTTATTTGTTTTTAGGAATAAATTGAATTCATTTCAAAAGAAATTATTTAATTGAATTACTTAGTTATAAAGTTTGGATCAAAATATACATGACTATTTCAGTTGAATTGTAAATGAACCTTCATCTTTGAGTCACACATGAAATGCAATTATGACGTGAAGTATGATTTCTTATCAAATGAATTAAATTCGATTGCTAGTGAATTATGTCAAAATCCAATCAAATATAGTTATTTAAAAAATTGTTTATTCAAATTAGGAATGTTGAATCAACAAACAATGATTTCAAATGTGTTTTATTGTGAGATCCACCACATGCAGTCATATTTTATTTCTTTTTCTCTCTGATCATAAACAAGAAACTTGTTGTTCTGGGTTTAATTTTCTAGGAAAATATCAACTTCGTTATATGTAGAAGTTGCAAATAAGTTAACCATGTCGAAATTATTGTGCGTTTTGTAATCTACTTGGTATCAATGTTCTTTTCACTCCAGTCTTGATCAAGTTTGGATGAAATTATCTCAGATGTTTGTGCATCCTCTTGTTTGTTCTGCAGATATGAGTTTAAATATCCCCGTCCACCGAAGCCCAAAGCTCCACGGATATATGAAGCTCATGTGGGAATGAGTAGCTCTGAACCTCGCATAAACTCTTATAGGGAATTCACAGATGATATTTTGCCACGTATTCGGGAAAATAACTATAATACAGTCCAGCTGATGGCTGTGATGGAGCATTCCTATTATGCATCATTTGGATATCATGTAACAAACTTCTTTGCTGTGAGTAGTAGATCTGGAACCCCCGAAGATCTTAAATATCTGATAGATAAGGCCCATAGCCTAGGTTTGCATGTTTTGATGGATGTTGTCCACAGTCATGCTAGTAATAATATTACTGATGGACTCAATGGCTTTGATGTGGGCCAAAGTTCACAAGAATCTTACTTTCACACTGGGGATAGAGGCTACCACAAATTATGGGATAGTAGACTTTTTAACTATGCCAACTGGGAAGTTCTTCGTTTCCTTTTATCTAATTTAAGGTGGTGGCTGGATGAGTTCAAATTTGATGGATTTCGATTTGATGGAGTAACGTCAATGTTGTATCATCATCATGGAATCAACATGGCATTTACAGGGGATTATAATGAATATTTTAGTGAAGCAACTGATGTGGATGCTGTTGTCTATTTGATGCTGGCCAACTGTCTGGTCCATAATATTTTGCCAGATGCAACTATCATTGCTGAAGATGTTTCTGGCATGCCTGGACTCGGCCGACCAGTTTCTGAGGCGGGAATTGGTTTTGACTATCGACTAGCCATGGCTATCCCTGATAAGTGGATTGACTACGTGAAGAACAAGAAAGACTATGAATGGTCAATGAAGGAAATTTCGTCGAATTTGACAAATAGGAGATACACAGAGAAATGTATCGCTTATGCTGAAAGCCACGACCAAGTATGATCTTTGTCATTATGTGTTGAGTATTTGTGATACCTTTGTGTTGGAAATAATATAGAATTTAGTTTTGGTTAAATTTGTGAACAGAAAAATGATGGAAACTAGAGGTGACATGCAATCAAGAAATTATTTTTGAATTGTTTTTGACTGCCTGCACTAACGTCTTATATTTTTTCTCTTGGGCAGTCCATTGTTGGGGACAAGACTATTGCATTTTTACTAATGGATGAAGAAATGTATTCTAGCATGTCTTGTTTGACTGATGCTTCTCCTACTATTGACCGAGGGATTGCTCTTCACAAGGTTTTTATCTCACCATTAAATATTCTGGACTACATACATGTACAAAATCATAAATTGAATTGTGAAGCTGCTAATGAGACATGTAGTTTTTATTGCCTTGTAGTCATTGCTATCTTAATCTTTTTCAGATGATACACTTCTTAACCATGGCATTAGGTGGAGAGGGCTACCTTAATTTTATGGGCAATGAGGTATGCATACTGATTTACTCTTGTACCCGAAAAACCGTTGCTCCCTGTTACTGTATGATTCACCTGATATTTATCTTCTTAATGAATAAAATGCAACTTGCTGATGAAAAATGGATTTGCTAGAGGTGGTGCTTGCACGACATTGTGTTGTGTGTTTGTTAGTTTGGTGTCTGTTAGTGACTGTTACTCTACTAGTGGCGGAGGTATTTAGTTGATAAGATAGTTAGCTGCTATAGTTCCAGCATATTGCTGATAAATAGGAGGAGAGGTTGAAAGAGAGTATCTTATGATTTCACAGGCGTTGGAACTAGGTAGGCTGCATACCCTTGAAGTGTGAAGACTTACAACTACCACCTTGTAGTCAAGGTTCATTTTACATATTTTGTGTTATGTCAAGTTGCTGACAACTGAATGTTTCCTCTTTGGGTTTATGGGTTGCTTCTTCTAGCTAGAAGAATGTTTATACATTATTTGCTTTCAAAGCACATACTCTGGATATTTTGAAGCATCTCACTCTCATTGCTATAGTTGTTGACCATGTTGTCATTTGTTGAATCATATTCGTAATGTCATTTTTATTTAGTTTGGCCATCCGGAGTGGATTGATTTCCCAAGAGAAGGCAATGGATGGAGTTACGAGAAATGCAGGCGTCAGTGGAATCTTGTGGATACAGATCACCTGAGATACAAGGTAGCGTGCGTGCATGTATATTTGTTCGTTACAGAATATTGACATCTCTTTTGTGGCTTCGTTTCTTGGTTGGGACTTTTCCGCAAGTTTAATTATTTATGATCTCCATTATCCTCATAATAGAATACTGTGTGAAATGGCAACTGTCATTTTGCTTATTTCTGAGTGGTGCATAATTCTACTCCGTGGCCTTATTTTGTTTAGTTCCTTATTTCCCCGTCTGCAGATTTCTTTGTATTCTCGTGCATTCTTGCAATTTATTGCTCGTCTTTAAGATAAATGTTGTATTTCTGCTTTTGGAACTTGTGCAGTTCATGAATGCATTTGACAGAGCAATGAACTTGCTTGATGATAAATTCTCATTCCTTGCATCAACAAAACAGATTGTGAGCAGCACTAACAATGAAGACAAGGTAAATATGCCCCCAAATGATTGTACTATTCTCATTCCTAATGTAACATTTTTTTACTACTAGACAATTCAGAGATTTTCAGATTTTCTTATACCAAGACAGATTAAAATAGACTACATCCTAGAATATATACACTGGTGTATGAGGAAGACTTTTCTTAAAAATGAATGAACAAGCCATTGTCCACTCCTAGTTGATTTCAAGCATAACTCTGTGCTATAAATGCTTATGTTTTTTCTTTTATAGGTTATAGTCTTTGAACGTGGTGATCTGGTGTTTGTGTTCAATTTTCATCCAGAGAATACATACGAAGGGTATGCAATGTGTTAAACTATCATTTGTGTGCGGGTAATTTATTTGTGCCGGGTTGTGTGTTTGGTTTTATGTGAAATTTTTATATACATTTCTGTAATAGTAACTATTAAACACACATGATTTTGATGAAACATTGAACATACAGGTATAAAATTGGGTGTGACTTGCCTGGGAAATACAGAGTTGCACTGGATAGTGATGCTCAGGAATTTGGAGGACATGGAAGAGTAAGGAGCCCTAATCTTTCTGGTATTAGATTATAAGGATAGTCCCTCAAGTCCGTCCTTCAAAGTTATATTTGATTACCACAGTTTAGACTTTAGATTTTTGAAGAATTAATTTGGCGATCGAAATATTTTGAGATCGAATAATGAGGCAACATGTGTAACTTTGGAGGACCAACATGCAAATTAAATCATATAAGTTGTCCTGATTTTACCCTATAAGTGGTAGACGTCAACTCAGTTACTATTATTCTATGGTTCTTGACTATATGTGTTCCTTGTCATTTTTGCGTGTATATGAAGTTGACCATTTTCCACTTCTAGGTGGGACATGATGCAGACCACTTCACATCCCCAGAAGGCATACCAGGAGTTCCTGAAACAAATTTCAATAATCGACCCAATTCCTTCAAGGTCCTCTCCCCACCTCGTACCTGTGTGGTATGTGATCTGATCCCTTTTCATTTAAATTTTTGTATGTTAGTTGTATACGTTAACAAAAGCTAAAATGTAGATATAAAAACTAAAACAATTTTGCTAACATAGAATTTTAGAACATTGGTTAAATAACAAAAGAATATCAAGTGAGAAAAGTTTATTTTTGAGCACGGCAATAGTTTAGCTCACCATTTCTTTTTCTAACAATGTGAATTAGTTTTGCTGAAAAGTTGGAAAAAATATGATGATTTGTCATGTCAAAGTTGGGTTTGAGTTATGGAGTTAAAAAATTTCATTTTCACTTCATGGCAAAATGTGAATTGCTAATTGAATTTGAAAATTTCCAAAGGTATATTATAGAGTGGACGAAAGCCAAGAAGAAAGCAACAGTGCCAATTTGGGTGTAGAAGAGTCCTTTGCTGCAGCAGATACTGATGCTGTAGATATTCCTGATGTTTCTACAGAGAACAAAGAAGACGCAGTTGTTACCGAAATTCTTTGA
Protein sequence

>MS.gene52770.t1

MISSFAFNIASTTHHTSTNKQHLVKQKPVHVALGYHNPNGCKVFDFRSTYKKVSSGFKGVAVMTDDKSTMASVEEDFENIGILDVDSSLKPFKDHFKFRLKKYLDQKKLIEDYEGGLEEFAKGYLKFGFNREEDGVVYREWAPAAQEAQIIGDFNGWDGSNHHMEKNQFGVWSIKIPDADGNPVIPHNSRVKFRFKHSDGFWVDRIPAWIKYATVDPTRFAAPYDGVYWDPPLSERYEFKYPRPPKPKAPRIYEAHVGMSSSEPRINSYREFTDDILPRIRENNYNTVQLMAVMEHSYYASFGYHVTNFFAVSSRSGTPEDLKYLIDKAHSLGLHVLMDVVHSHASNNITDGLNGFDVGQSSQESYFHTGDRGYHKLWDSRLFNYANWEVLRFLLSNLRWWLDEFKFDGFRFDGVTSMLYHHHGINMAFTGDYNEYFSEATDVDAVVYLMLANCLVHNILPDATIIAEDVSGMPGLGRPVSEAGIGFDYRLAMAIPDKWIDYVKNKKDYEWSMKEISSNLTNRRYTEKCIAYAESHDQSIVGDKTIAFLLMDEEMYSSMSCLTDASPTIDRGIALHKMIHFLTMALGGEGYLNFMGNEFGHPEWIDFPREGNGWSYEKCRRQWNLVDTDHLRYKFMNAFDRAMNLLDDKFSFLASTKQIVSSTNNEDKVIVFERGDLVFVFNFHPENTYEGYKIGCDLPGKYRVALDSDAQEFGGHGRVGHDADHFTSPEGIPGVPETNFNNRPNSFKVLSPPRTCVVYYRVDESQEESNSANLGVEESFAAADTDAVDIPDVSTENKEDAVVTEIL