AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene05845

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05845.t1 MTR_8g104200 97.754 1024 23 0 10 1033 1 1024 0.0 1965
MS.gene05845.t1 MTR_8g104200 90.086 232 23 0 882 1113 1023 1254 6.03e-119 397
MS.gene05845.t1 MTR_8g104200 88.158 152 18 0 882 1033 948 1099 1.33e-74 270
MS.gene05845.t1 MTR_6g084490 57.470 830 204 10 193 891 30 841 0.0 865
MS.gene05845.t1 MTR_8g098230 47.128 1027 471 19 43 1045 10 988 0.0 833
MS.gene05845.t1 MTR_8g098230 46.909 1019 477 18 43 1045 10 980 0.0 820
MS.gene05845.t1 MTR_3g060900 54.601 489 194 6 454 928 368 842 1.13e-163 514
MS.gene05845.t1 MTR_7g109130 53.669 477 202 7 452 924 27 488 1.40e-158 488
MS.gene05845.t1 MTR_7g109130 53.669 477 202 7 452 924 106 567 9.07e-158 488
MS.gene05845.t1 MTR_1g087880 55.679 449 186 5 462 907 334 772 1.19e-157 495
MS.gene05845.t1 MTR_1g087880 25.000 400 225 15 58 435 46 392 1.52e-14 79.3
MS.gene05845.t1 MTR_5g096570 54.227 485 210 6 454 928 364 846 3.63e-157 505
MS.gene05845.t1 MTR_1g083770 49.427 524 246 6 394 900 268 789 2.07e-156 490
MS.gene05845.t1 MTR_1g083770 27.171 357 203 10 52 392 45 360 6.83e-17 86.7
MS.gene05845.t1 MTR_7g112420 53.419 468 200 5 434 889 177 638 2.28e-156 488
MS.gene05845.t1 MTR_7g109130 53.249 477 207 5 452 924 328 792 5.12e-156 491
MS.gene05845.t1 MTR_7g109130 53.669 477 202 7 452 924 328 789 6.09e-155 488
MS.gene05845.t1 MTR_7g112420 53.333 465 199 4 434 889 307 762 3.01e-154 486
MS.gene05845.t1 MTR_7g112420 28.516 256 123 9 67 309 61 269 6.70e-11 67.4
MS.gene05845.t1 MTR_7g091290 53.211 436 188 6 454 882 322 748 9.75e-141 451
MS.gene05845.t1 MTR_7g091290 34.000 150 75 4 44 175 21 164 1.88e-12 72.4
MS.gene05845.t1 MTR_7g091290 49.192 433 169 5 454 882 319 704 2.70e-123 403
MS.gene05845.t1 MTR_7g091290 34.459 148 73 4 46 175 21 162 2.40e-12 72.0
MS.gene05845.t1 MTR_5g031470 45.980 398 184 7 484 867 355 735 1.13e-94 326
MS.gene05845.t1 MTR_5g049620 45.980 398 184 7 484 867 330 710 1.81e-94 321
MS.gene05845.t1 MTR_5g049820 45.477 398 186 7 484 867 330 710 1.10e-92 318
MS.gene05845.t1 MTR_1g082920 46.027 365 184 5 509 869 132 487 3.49e-92 313
MS.gene05845.t1 MTR_2g069950 36.216 555 300 12 383 904 183 716 9.04e-92 317
MS.gene05845.t1 MTR_7g113520 46.237 372 183 4 504 869 107 467 2.19e-91 309
MS.gene05845.t1 MTR_2g010760 39.293 481 235 13 423 859 303 770 1.28e-84 292
MS.gene05845.t1 MTR_4g081390 35.382 602 326 16 297 865 213 784 2.70e-83 288
MS.gene05845.t1 MTR_2g082570 42.674 389 191 8 500 865 373 752 1.32e-82 286
MS.gene05845.t1 MTR_4g092140 37.901 467 248 11 413 856 213 660 1.08e-78 273
MS.gene05845.t1 MTR_5g025100 34.331 568 301 16 342 889 735 1250 1.14e-70 258
MS.gene05845.t1 MTR_8g072430 32.692 624 327 17 319 875 623 1220 9.16e-69 253
MS.gene05845.t1 MTR_4g081390 34.177 553 301 16 297 816 215 737 1.27e-67 243
MS.gene05845.t1 MTR_8g471180 37.468 387 218 11 507 889 129 495 7.92e-59 222
MS.gene05845.t1 MTR_1g081800 38.462 351 196 8 512 854 76 414 1.79e-58 213
MS.gene05845.t1 MTR_1g059730 37.949 390 203 11 524 889 13 387 2.46e-57 216
MS.gene05845.t1 MTR_7g105030 37.340 391 206 11 524 890 9 384 1.94e-56 213
MS.gene05845.t1 MTR_7g105030 37.340 391 206 11 524 890 9 384 1.94e-56 213
MS.gene05845.t1 MTR_2g096010 36.776 397 220 13 511 889 35 418 1.53e-54 207
MS.gene05845.t1 MTR_1g067630 36.269 386 211 10 524 889 54 424 2.07e-53 204
MS.gene05845.t1 MTR_4g087040 37.600 375 203 11 569 924 235 597 1.92e-52 202
MS.gene05845.t1 MTR_4g123730 40.968 310 158 9 569 860 191 493 5.62e-52 201
MS.gene05845.t1 MTR_8g080910 36.160 401 204 12 525 897 56 432 1.29e-51 199
MS.gene05845.t1 MTR_3g084790 36.176 387 208 12 525 889 99 468 1.92e-51 198
MS.gene05845.t1 MTR_3g100270 35.092 379 203 13 525 878 10 370 1.19e-50 195
MS.gene05845.t1 MTR_2g082570 38.816 304 154 8 500 780 373 667 1.27e-50 191
MS.gene05845.t1 MTR_2g087840 39.883 341 176 12 569 891 130 459 2.42e-50 195
MS.gene05845.t1 MTR_5g011500 33.056 360 199 8 523 854 56 401 3.11e-48 186
MS.gene05845.t1 MTR_4g094882 34.759 374 186 12 525 854 13 372 3.72e-48 187
MS.gene05845.t1 MTR_4g112350 33.252 412 242 9 498 889 92 490 3.87e-48 185
MS.gene05845.t1 MTR_2g055910 36.216 370 207 10 507 863 53 406 5.70e-48 182
MS.gene05845.t1 MTR_3g102170 32.367 414 227 11 525 903 9 404 1.45e-47 185
MS.gene05845.t1 MTR_1g484960 33.747 403 207 12 525 888 4 385 1.37e-45 179
MS.gene05845.t1 MTR_1g018940 31.884 414 229 11 525 903 9 404 2.50e-45 178
MS.gene05845.t1 MTR_5g066320 34.278 353 197 12 525 854 18 358 1.01e-44 177
MS.gene05845.t1 MTR_7g075060 32.312 359 202 10 523 854 51 395 4.50e-44 173
MS.gene05845.t1 MTR_1g017540 34.748 377 207 15 568 926 45 400 3.22e-43 170
MS.gene05845.t1 MTR_4g071210 33.069 378 212 12 522 889 87 433 1.81e-42 169
MS.gene05845.t1 MTR_4g071210 33.069 378 212 12 522 889 87 433 1.93e-42 169
MS.gene05845.t1 MTR_3g117330 33.687 377 205 11 525 889 100 443 2.11e-42 169
MS.gene05845.t1 MTR_6g082470 33.237 346 204 8 525 860 31 359 4.99e-41 164
MS.gene05845.t1 MTR_7g093720 33.421 380 216 11 519 889 68 419 7.09e-41 164
MS.gene05845.t1 MTR_4g124650 33.092 414 220 19 525 909 144 529 1.86e-40 162
MS.gene05845.t1 MTR_3g113110 32.723 382 219 13 525 891 20 378 3.65e-39 159
MS.gene05845.t1 MTR_5g021650 34.286 350 197 12 525 860 21 351 4.40e-39 158
MS.gene05845.t1 MTR_5g094310 31.969 391 218 14 525 890 75 442 4.39e-37 152
MS.gene05845.t1 MTR_7g061020 31.858 339 200 10 525 849 26 347 4.67e-37 149
MS.gene05845.t1 MTR_8g076190 31.937 382 214 13 525 890 20 371 1.40e-36 150
MS.gene05845.t1 MTR_8g076190 31.937 382 214 13 525 890 20 371 1.63e-36 150
MS.gene05845.t1 MTR_3g055940 31.078 399 225 12 524 897 75 448 1.20e-35 147
MS.gene05845.t1 MTR_4g071900 31.909 351 209 10 508 847 9 340 4.02e-35 145
MS.gene05845.t1 MTR_8g076190 31.105 389 215 13 525 890 20 378 4.05e-35 145
MS.gene05845.t1 MTR_6g086735 31.088 386 224 14 508 879 103 460 3.62e-33 137
MS.gene05845.t1 MTR_6g086735 31.088 386 224 14 508 879 103 460 4.12e-33 137
MS.gene05845.t1 MTR_2g436650 31.549 355 198 12 525 853 118 453 4.19e-33 138
MS.gene05845.t1 MTR_2g436650 31.549 355 198 12 525 853 198 533 6.41e-33 138
MS.gene05845.t1 MTR_4g119980 30.270 370 215 11 508 853 189 539 2.14e-32 136
MS.gene05845.t1 MTR_2g101990 29.508 366 224 10 525 878 186 529 7.13e-32 134
MS.gene05845.t1 MTR_1g075680 28.689 366 202 13 525 856 59 399 1.14e-24 111
MS.gene05845.t1 MTR_6g053680 28.660 321 189 11 525 831 6 300 7.21e-18 89.7
MS.gene05845.t1 MTR_3g113630 26.027 292 181 9 571 847 145 416 2.39e-13 75.5
MS.gene05845.t1 MTR_3g113630 26.027 292 181 9 571 847 145 416 2.68e-13 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05845.t1 AT1G63640 43.767 1099 504 19 51 1110 42 1065 0.0 806
MS.gene05845.t1 AT1G63640 43.767 1099 504 19 51 1110 42 1065 0.0 806
MS.gene05845.t1 AT1G63640 43.767 1099 504 19 51 1110 32 1055 0.0 806
MS.gene05845.t1 AT1G63640 43.727 1100 504 19 51 1110 42 1066 0.0 806
MS.gene05845.t1 AT1G63640 43.545 1100 499 19 51 1110 42 1059 0.0 803
MS.gene05845.t1 AT5G41310 42.999 1007 401 25 51 1051 43 882 0.0 695
MS.gene05845.t1 AT1G18410 55.447 615 248 9 296 891 251 858 0.0 648
MS.gene05845.t1 AT1G18410 54.167 240 108 2 197 435 36 274 1.86e-63 234
MS.gene05845.t1 AT1G18410 55.447 615 248 9 296 891 251 858 0.0 648
MS.gene05845.t1 AT1G18410 54.167 240 108 2 197 435 36 274 1.86e-63 234
MS.gene05845.t1 AT1G18410 55.447 615 248 9 296 891 394 1001 0.0 646
MS.gene05845.t1 AT1G18410 53.975 239 100 2 197 435 189 417 1.11e-59 224
MS.gene05845.t1 AT1G73860 59.963 537 206 5 361 889 259 794 0.0 645
MS.gene05845.t1 AT1G73860 62.201 209 77 2 219 426 1 208 1.53e-66 243
MS.gene05845.t1 AT1G73860 59.963 537 206 5 361 889 342 877 0.0 644
MS.gene05845.t1 AT1G73860 54.307 267 115 4 162 426 30 291 1.90e-70 256
MS.gene05845.t1 AT1G18410 54.959 615 243 9 296 891 394 993 0.0 641
MS.gene05845.t1 AT1G18410 53.975 239 100 2 197 435 189 417 1.27e-59 224
MS.gene05845.t1 AT1G18410 54.634 615 240 10 296 891 241 835 0.0 633
MS.gene05845.t1 AT1G18410 53.975 239 100 2 197 435 36 264 2.61e-60 225
MS.gene05845.t1 AT1G09170 39.573 844 379 19 57 882 62 792 4.27e-172 528
MS.gene05845.t1 AT1G09170 39.573 844 379 19 57 882 62 792 2.81e-171 527
MS.gene05845.t1 AT1G09170 39.527 845 380 19 56 882 61 792 7.29e-170 528
MS.gene05845.t1 AT1G09170 39.856 833 370 19 57 871 62 781 7.74e-170 521
MS.gene05845.t1 AT1G09170 39.856 833 370 19 57 871 62 781 7.74e-170 521
MS.gene05845.t1 AT5G27000 53.033 511 220 7 380 881 253 752 4.09e-160 501
MS.gene05845.t1 AT5G27000 26.613 372 190 13 40 391 35 343 1.17e-17 89.4
MS.gene05845.t1 AT3G44730 55.782 441 189 3 454 890 307 745 2.08e-159 502
MS.gene05845.t1 AT3G44730 55.782 441 189 3 454 890 307 745 2.08e-159 502
MS.gene05845.t1 AT3G44730 55.782 441 189 3 454 890 352 790 5.40e-159 502
MS.gene05845.t1 AT3G44730 55.782 441 189 3 454 890 352 790 5.40e-159 502
MS.gene05845.t1 AT1G09170 37.633 845 360 18 56 882 61 756 3.11e-155 489
MS.gene05845.t1 AT2G47500 51.033 484 216 6 434 912 307 774 3.39e-152 479
MS.gene05845.t1 AT2G47500 31.606 193 106 7 32 199 28 219 4.10e-13 74.7
MS.gene05845.t1 AT2G47500 51.033 484 216 6 434 912 307 774 3.86e-152 480
MS.gene05845.t1 AT2G47500 31.606 193 106 7 32 199 28 219 3.97e-13 74.7
MS.gene05845.t1 AT1G09170 38.205 780 354 18 57 821 62 728 1.53e-147 460
MS.gene05845.t1 AT1G09170 38.205 780 354 18 57 821 62 728 1.53e-147 460
MS.gene05845.t1 AT3G10310 52.916 463 199 8 423 878 267 717 4.43e-146 463
MS.gene05845.t1 AT3G10310 41.964 112 51 3 56 153 26 137 1.66e-15 82.4
MS.gene05845.t1 AT3G10310 52.916 463 199 8 423 878 267 717 4.53e-146 463
MS.gene05845.t1 AT3G10310 41.964 112 51 3 56 153 26 137 1.81e-15 82.0
MS.gene05845.t1 AT1G72250 40.590 542 269 13 398 904 354 877 4.24e-100 344
MS.gene05845.t1 AT1G72250 40.590 542 269 13 398 904 365 888 7.18e-100 343
MS.gene05845.t1 AT1G72250 40.590 542 269 13 398 904 366 889 7.64e-100 343
MS.gene05845.t1 AT1G72250 38.669 556 282 10 390 904 331 868 4.57e-99 341
MS.gene05845.t1 AT2G22610 46.683 407 197 7 502 900 395 789 5.82e-97 332
MS.gene05845.t1 AT2G22610 46.683 407 197 7 502 900 395 789 5.99e-97 333
MS.gene05845.t1 AT2G22610 46.683 407 197 7 502 900 396 790 6.21e-97 333
MS.gene05845.t1 AT5G27550 43.363 452 237 7 428 869 30 472 2.06e-96 324
MS.gene05845.t1 AT5G27550 43.363 452 237 7 428 869 30 472 2.06e-96 324
MS.gene05845.t1 AT5G54670 38.095 546 297 12 340 859 149 679 2.72e-90 305
MS.gene05845.t1 AT5G54670 38.095 546 297 12 340 859 209 739 4.74e-90 306
MS.gene05845.t1 AT5G54670 38.095 546 297 12 340 859 209 739 4.74e-90 306
MS.gene05845.t1 AT4G27180 46.524 374 172 8 512 867 375 738 2.18e-88 301
MS.gene05845.t1 AT4G27180 46.524 374 172 8 512 867 375 738 2.18e-88 301
MS.gene05845.t1 AT4G21270 44.947 376 179 7 512 867 419 786 1.19e-85 295
MS.gene05845.t1 AT4G05190 45.652 368 172 7 512 859 403 762 1.56e-85 294
MS.gene05845.t1 AT4G05190 45.652 368 172 7 512 859 416 775 2.05e-85 294
MS.gene05845.t1 AT5G65930 34.369 483 282 11 409 884 788 1242 2.96e-65 242
MS.gene05845.t1 AT5G65930 34.369 483 282 11 409 884 794 1248 2.96e-65 242
MS.gene05845.t1 AT5G65930 34.369 483 282 11 409 884 787 1241 3.23e-65 242
MS.gene05845.t1 AT1G55550 32.489 474 263 12 474 937 61 487 1.29e-64 236
MS.gene05845.t1 AT5G27950 37.853 354 194 9 512 854 67 405 2.20e-59 216
MS.gene05845.t1 AT5G65460 34.625 413 225 12 507 906 121 501 3.79e-58 219
MS.gene05845.t1 AT5G65460 34.625 413 225 12 507 906 121 501 4.82e-58 218
MS.gene05845.t1 AT5G65460 34.625 413 225 12 507 906 121 501 5.11e-58 219
MS.gene05845.t1 AT3G45850 37.887 388 201 14 524 889 55 424 5.26e-58 218
MS.gene05845.t1 AT3G45850 37.887 388 201 14 524 889 55 424 5.26e-58 218
MS.gene05845.t1 AT5G65460 34.625 413 225 12 507 906 121 501 5.42e-58 219
MS.gene05845.t1 AT2G36200 37.755 392 203 12 524 890 12 387 5.69e-58 218
MS.gene05845.t1 AT2G36200 37.755 392 203 12 524 890 12 387 8.97e-58 218
MS.gene05845.t1 AT2G28620 37.306 386 206 12 524 889 50 419 2.34e-57 216
MS.gene05845.t1 AT2G28620 37.306 386 206 12 524 889 50 419 2.47e-57 216
MS.gene05845.t1 AT2G28620 37.306 386 206 12 524 889 50 419 2.47e-57 216
MS.gene05845.t1 AT5G65460 34.293 417 228 13 507 906 121 508 1.36e-56 215
MS.gene05845.t1 AT5G10470 33.251 406 234 9 507 903 125 502 4.92e-55 210
MS.gene05845.t1 AT5G10470 33.251 406 234 9 507 903 125 502 5.18e-55 210
MS.gene05845.t1 AT2G37420 37.435 382 211 10 524 889 48 417 5.61e-53 202
MS.gene05845.t1 AT2G37420 37.435 382 211 10 524 889 48 417 5.61e-53 202
MS.gene05845.t1 AT3G44050 37.532 389 205 13 524 891 93 464 1.55e-52 202
MS.gene05845.t1 AT4G14150 36.504 389 203 14 525 890 92 459 2.16e-52 201
MS.gene05845.t1 AT3G17360 41.018 334 162 10 569 874 210 536 2.70e-52 202
MS.gene05845.t1 AT3G17360 41.018 334 162 10 569 874 210 536 2.72e-52 202
MS.gene05845.t1 AT3G17360 41.018 334 162 10 569 874 210 536 2.73e-52 202
MS.gene05845.t1 AT3G23670 36.788 386 204 13 525 889 97 463 5.17e-52 199
MS.gene05845.t1 AT3G23670 36.788 386 204 13 525 889 97 463 8.58e-52 199
MS.gene05845.t1 AT3G63480 37.966 295 169 5 568 854 47 335 9.46e-52 190
MS.gene05845.t1 AT3G19050 40.881 318 165 8 569 869 235 546 4.33e-51 198
MS.gene05845.t1 AT3G63480 38.462 299 166 7 568 854 47 339 1.04e-50 187
MS.gene05845.t1 AT5G60930 35.040 371 196 11 525 860 7 367 8.63e-48 187
MS.gene05845.t1 AT5G60930 35.040 371 196 11 525 860 7 367 9.65e-48 187
MS.gene05845.t1 AT5G60930 35.040 371 196 11 525 860 7 367 1.57e-47 186
MS.gene05845.t1 AT1G12430 32.865 356 200 7 525 854 71 413 7.12e-47 182
MS.gene05845.t1 AT1G12430 32.865 356 200 7 525 854 71 413 8.02e-47 182
MS.gene05845.t1 AT1G01950 32.778 360 199 9 523 854 59 403 8.35e-47 182
MS.gene05845.t1 AT1G01950 32.778 360 199 9 523 854 59 403 8.58e-47 182
MS.gene05845.t1 AT3G49650 34.957 349 203 7 525 860 15 352 8.74e-47 181
MS.gene05845.t1 AT1G01950 32.778 360 199 9 523 854 59 403 1.31e-46 182
MS.gene05845.t1 AT5G47820 34.783 368 194 12 524 853 11 370 3.33e-46 181
MS.gene05845.t1 AT5G47820 34.783 368 194 12 524 853 11 370 3.33e-46 181
MS.gene05845.t1 AT1G18550 35.277 343 195 7 525 853 152 481 2.33e-45 176
MS.gene05845.t1 AT3G54870 31.832 333 198 7 542 853 117 441 3.37e-45 177
MS.gene05845.t1 AT3G54870 31.832 333 198 7 542 853 117 441 3.39e-45 177
MS.gene05845.t1 AT3G54870 31.832 333 198 7 542 853 117 441 3.53e-45 178
MS.gene05845.t1 AT4G39050 37.386 329 175 10 568 889 138 442 3.59e-45 178
MS.gene05845.t1 AT1G59540 35.196 358 183 12 568 890 43 386 9.56e-45 175
MS.gene05845.t1 AT1G18370 31.628 430 247 13 525 942 32 426 1.41e-43 172
MS.gene05845.t1 AT2G21380 35.714 336 171 11 568 889 144 448 2.65e-43 172
MS.gene05845.t1 AT2G21380 35.714 336 171 11 568 889 144 448 2.65e-43 172
MS.gene05845.t1 AT3G50240 33.151 365 200 9 525 854 26 381 5.88e-43 170
MS.gene05845.t1 AT5G06670 33.777 376 214 11 522 889 64 412 6.74e-43 170
MS.gene05845.t1 AT5G06670 33.777 376 214 11 522 889 64 412 6.74e-43 170
MS.gene05845.t1 AT1G21730 35.694 353 191 13 521 860 72 401 7.54e-43 170
MS.gene05845.t1 AT5G06670 33.777 376 214 11 522 889 64 412 8.79e-43 168
MS.gene05845.t1 AT3G50240 33.151 365 200 9 525 854 26 381 1.14e-42 170
MS.gene05845.t1 AT3G50240 33.151 365 200 9 525 854 26 381 1.15e-42 170
MS.gene05845.t1 AT5G06670 33.777 376 214 11 522 889 64 412 1.33e-42 167
MS.gene05845.t1 AT5G06670 33.777 376 214 11 522 889 64 412 1.33e-42 167
MS.gene05845.t1 AT5G06670 33.777 376 214 11 522 889 64 412 1.33e-42 167
MS.gene05845.t1 AT3G12020 32.688 413 236 14 518 911 63 452 4.34e-42 167
MS.gene05845.t1 AT3G12020 32.688 413 236 14 518 911 63 452 4.34e-42 167
MS.gene05845.t1 AT3G10180 35.376 359 183 10 568 888 39 386 5.32e-42 168
MS.gene05845.t1 AT3G10180 35.376 359 183 10 568 888 39 386 5.48e-42 168
MS.gene05845.t1 AT5G06670 33.247 385 213 12 522 889 64 421 1.63e-41 166
MS.gene05845.t1 AT5G06670 33.247 385 213 12 522 889 64 421 1.63e-41 166
MS.gene05845.t1 AT3G12020 32.688 413 236 14 518 911 63 452 1.86e-41 166
MS.gene05845.t1 AT3G12020 32.688 413 236 14 518 911 63 452 1.86e-41 166
MS.gene05845.t1 AT4G38950 31.407 398 222 11 525 889 14 393 4.55e-40 160
MS.gene05845.t1 AT4G38950 31.407 398 222 11 525 889 14 393 4.55e-40 160
MS.gene05845.t1 AT4G38950 31.407 398 222 11 525 889 14 393 4.55e-40 160
MS.gene05845.t1 AT4G38950 31.407 398 222 11 525 889 14 393 4.55e-40 160
MS.gene05845.t1 AT4G38950 31.407 398 222 11 525 889 14 393 4.55e-40 160
MS.gene05845.t1 AT4G24170 36.789 299 169 6 568 860 49 333 6.76e-40 161
MS.gene05845.t1 AT4G24170 36.789 299 169 6 568 860 49 333 6.76e-40 161
MS.gene05845.t1 AT3G51150 32.565 347 207 9 525 860 18 348 1.53e-39 160
MS.gene05845.t1 AT3G51150 32.565 347 207 9 525 860 18 348 1.54e-39 160
MS.gene05845.t1 AT3G51150 32.565 347 207 9 525 860 18 348 1.54e-39 160
MS.gene05845.t1 AT3G51150 32.565 347 207 9 525 860 18 348 1.54e-39 160
MS.gene05845.t1 AT2G21300 32.938 337 191 10 525 847 25 340 4.23e-38 154
MS.gene05845.t1 AT2G21300 32.938 337 191 10 525 847 25 340 4.23e-38 154
MS.gene05845.t1 AT2G21300 32.938 337 191 10 525 847 25 340 4.23e-38 154
MS.gene05845.t1 AT2G21300 32.938 337 191 10 525 847 25 340 4.23e-38 154
MS.gene05845.t1 AT2G21300 32.938 337 191 10 525 847 25 340 4.23e-38 154
MS.gene05845.t1 AT5G66310 34.333 300 174 8 568 860 66 349 1.91e-37 153
MS.gene05845.t1 AT5G66310 34.333 300 174 8 568 860 66 349 1.91e-37 153
MS.gene05845.t1 AT5G66310 34.333 300 174 8 568 860 66 349 1.91e-37 153
MS.gene05845.t1 AT3G43210 35.030 334 185 11 525 847 30 342 2.05e-37 152
MS.gene05845.t1 AT3G43210 35.030 334 185 11 525 847 30 342 2.05e-37 152
MS.gene05845.t1 AT3G43210 35.030 334 185 11 525 847 30 342 2.05e-37 152
MS.gene05845.t1 AT3G43210 35.030 334 185 11 525 847 30 342 2.05e-37 152
MS.gene05845.t1 AT3G43210 35.030 334 185 11 525 847 30 342 2.05e-37 152
MS.gene05845.t1 AT1G01950 33.210 271 152 5 604 854 1 262 6.09e-36 147
MS.gene05845.t1 AT5G02370 30.233 344 195 9 524 849 20 336 1.07e-35 144
MS.gene05845.t1 AT3G16060 30.831 373 218 10 503 858 148 497 4.20e-35 144
MS.gene05845.t1 AT3G50240 36.559 279 143 6 608 854 3 279 4.19e-34 142
MS.gene05845.t1 AT3G20150 32.320 362 198 12 532 853 82 436 2.06e-33 140
MS.gene05845.t1 AT3G20150 32.320 362 198 12 532 853 82 436 2.69e-33 140
MS.gene05845.t1 AT1G59540 35.135 296 148 10 629 890 9 294 1.83e-32 136
MS.gene05845.t1 AT3G16630 31.092 357 194 13 525 853 194 526 5.17e-31 132
MS.gene05845.t1 AT3G16630 31.092 357 194 13 525 853 194 526 5.17e-31 132
MS.gene05845.t1 AT5G42490 33.333 279 163 9 525 796 10 272 1.32e-27 121
MS.gene05845.t1 AT5G42490 33.333 279 163 9 525 796 10 272 1.35e-27 121
MS.gene05845.t1 AT5G27950 34.568 243 142 6 623 854 3 239 4.83e-27 116
MS.gene05845.t1 AT4G14330 29.060 351 215 11 525 863 49 377 1.88e-26 117
MS.gene05845.t1 AT5G65460 31.801 261 154 7 651 906 14 255 6.03e-25 113
MS.gene05845.t1 AT3G51150 41.139 158 87 3 709 860 38 195 5.00e-24 109
MS.gene05845.t1 AT5G23910 27.119 354 209 14 568 898 58 385 4.11e-20 96.7
MS.gene05845.t1 AT5G23910 27.119 354 209 14 568 898 54 381 4.44e-20 96.7

Find 205 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCATAGCATCTTGCTTAA+TGG 0.138061 4.4:+2541786 None:intergenic
CATATACCTGATGATTTCTT+TGG 0.142993 4.4:+2538983 None:intergenic
GTTCAAGCGGTAAGGAAATT+TGG 0.241758 4.4:-2539043 MS.gene05845:CDS
GAAAAGTTTGATGAATTCTT+TGG 0.245198 4.4:-2543813 MS.gene05845:CDS
TTCAATGGAATTGATAGAAT+TGG 0.246918 4.4:-2544519 MS.gene05845:CDS
TTCTCACTTGTTGCTCCATT+TGG 0.249324 4.4:+2540897 None:intergenic
ATGTACATCTTTCCCTTCTT+TGG 0.259854 4.4:+2541347 None:intergenic
AATGAAGTTCAAGAATTAAA+AGG 0.260151 4.4:-2541558 MS.gene05845:intron
ACCATTCCTTATAGACAAAA+AGG 0.260650 4.4:-2541427 MS.gene05845:CDS
CAAGGAGACGAGAGAATTAT+TGG 0.272171 4.4:-2539908 MS.gene05845:CDS
TAATCTTCATTTGGTAGATT+TGG 0.279804 4.4:-2540329 MS.gene05845:CDS
CCTTACCGCTTGAACAGTTC+TGG 0.284491 4.4:+2539051 None:intergenic
ATATACCTGATGATTTCTTT+GGG 0.299699 4.4:+2538984 None:intergenic
AGCTAAACATCGATCAGTTT+TGG 0.303316 4.4:-2544371 MS.gene05845:CDS
GCCTCATAGACTATGAGATT+TGG 0.306492 4.4:-2540815 MS.gene05845:CDS
GTAAGCTTGCTGTTTCTATA+TGG 0.318913 4.4:+2540178 None:intergenic
GACTACAGTACCCAGAGAAT+TGG 0.321198 4.4:-2544559 MS.gene05845:CDS
GCTTTAGGTGTTCCAATACT+AGG 0.326716 4.4:+2538589 None:intergenic
TTCAGATGTCATTAAGTTGA+TGG 0.330356 4.4:-2540550 MS.gene05845:CDS
AAATAGTCTTCTTCCTTCAT+TGG 0.335319 4.4:-2544338 MS.gene05845:CDS
TTCCTTGATTTGCACACACT+TGG 0.341494 4.4:-2540642 MS.gene05845:CDS
CTGAAAGCTTTGGATGGATT+GGG 0.343783 4.4:-2544050 MS.gene05845:CDS
TCAATGGAATTGATAGAATT+GGG 0.345802 4.4:-2544518 MS.gene05845:CDS
CGTGGGAAGGATTTCAAGTC+TGG 0.346680 4.4:-2540367 MS.gene05845:CDS
GTAGATCGATCTGATGTAAC+TGG 0.347515 4.4:-2540292 MS.gene05845:CDS
GGAAGATCTGAATAGCTTCC+AGG 0.353167 4.4:+2543136 None:intergenic
CCTCATAGACTATGAGATTT+GGG 0.354882 4.4:-2540814 MS.gene05845:CDS
TTCACCGGACCCGCCATAGA+AGG 0.356160 4.4:+2543647 None:intergenic
GTCGTAGTTTGTTTAGTATC+TGG 0.356495 4.4:+2544251 None:intergenic
TTCTTCGGATTCAAAATATC+AGG 0.359770 4.4:-2541976 MS.gene05845:CDS
CACCATTTGGTGTGGACAAC+AGG 0.361444 4.4:-2543715 MS.gene05845:CDS
CTTCGGACTACCCAATTCTC+TGG 0.368459 4.4:+2544548 None:intergenic
AAAAGTTTGATGAATTCTTT+GGG 0.371582 4.4:-2543812 MS.gene05845:CDS
ACGACCTGGTCCCGTAACTA+TGG 0.373589 4.4:-2544233 MS.gene05845:intron
TTTCATTCTTCCCCACCATT+TGG 0.383521 4.4:-2543728 MS.gene05845:CDS
TAAAACGTTTCTGAAAGCTT+TGG 0.385889 4.4:-2544060 MS.gene05845:CDS
TAGCCAGCTTCAACAGTTGA+AGG 0.391899 4.4:-2542363 MS.gene05845:intron
CAATTCTGCTTTAGCATCCC+TGG 0.394785 4.4:+2542067 None:intergenic
AACTGACGTCTGAGTTAATC+TGG 0.395500 4.4:+2540007 None:intergenic
CATGCATGGTAATCTTCATT+TGG 0.396043 4.4:-2540338 MS.gene05845:CDS
AGACATAGGTGAAAGTGATT+TGG 0.401644 4.4:-2541385 MS.gene05845:CDS
GTACTCGAGGCACTTGCATC+TGG 0.402111 4.4:-2542528 MS.gene05845:CDS
GACGAGAGAATTATTGGAAC+AGG 0.402509 4.4:-2539902 MS.gene05845:intron
TCTGAAAGCTTTGGATGGAT+TGG 0.411229 4.4:-2544051 MS.gene05845:CDS
AATTTATAACAGTCTGCAAT+TGG 0.414303 4.4:+2541934 None:intergenic
GAAAGTATTACCATAGTTAC+GGG 0.415524 4.4:+2544223 None:intergenic
CTATGAGATTTGGGTTCAAA+TGG 0.422199 4.4:-2540805 MS.gene05845:CDS
ATTACACTCCTCTACATAAA+CGG 0.425657 4.4:+2541756 None:intergenic
TAAGGAGATTGAGGATTCTT+CGG 0.427094 4.4:-2541991 MS.gene05845:CDS
GCATCAAGCCCTCGTGGGTA+TGG 0.430208 4.4:-2543761 MS.gene05845:CDS
TACATCTTTCCCTTCTTTGG+AGG 0.431598 4.4:+2541350 None:intergenic
AGAAAGTATTACCATAGTTA+CGG 0.436470 4.4:+2544222 None:intergenic
GAATGCAGTTAAGGAGATTG+AGG 0.439370 4.4:-2542000 MS.gene05845:CDS
GTTTCTCCGTTCACCTGAAA+AGG 0.440318 4.4:-2539372 MS.gene05845:CDS
AATGTATGTATATTCGCTTA+TGG 0.442618 4.4:-2541045 MS.gene05845:CDS
CAGATGGGGAATTCATTACT+AGG 0.445732 4.4:+2544589 None:intergenic
CCCACGAGGGCTTGATGCAT+TGG 0.446147 4.4:+2543766 None:intergenic
AGAACTGAGGAATGCAGTTA+AGG 0.446648 4.4:-2542009 MS.gene05845:CDS
TGCTGTTTCTATATGGTACA+TGG 0.447397 4.4:+2540185 None:intergenic
CAACTTCTGCAAACGTCTCT+TGG 0.452565 4.4:-2540154 MS.gene05845:intron
ATTAAAAGACAATCCACAAC+AGG 0.454077 4.4:+2543845 None:intergenic
CTTCATTTGGTAGATTTGGC+TGG 0.455120 4.4:-2540325 MS.gene05845:CDS
GGTCACAGAGGAAGAAAAGA+AGG 0.458384 4.4:-2542222 MS.gene05845:CDS
AACAAATCGCTTTCTGCCCT+CGG 0.458863 4.4:-2540241 MS.gene05845:CDS
GTTTCTCCATTCGCCTGAAA+AGG 0.461490 4.4:-2539597 MS.gene05845:CDS
GGTGGCATGCTTGTTGAGAA+AGG 0.467353 4.4:-2542742 MS.gene05845:CDS
ATATTCGCTTATGGCCAAAC+CGG 0.468096 4.4:-2541036 MS.gene05845:CDS
GCTTATGGCCAAACCGGGTC+CGG 0.473624 4.4:-2541030 MS.gene05845:CDS
CTAGTAATGAATTCCCCATC+TGG 0.474084 4.4:-2544588 MS.gene05845:CDS
CCCAAATCTCATAGTCTATG+AGG 0.474865 4.4:+2540814 None:intergenic
ACATCTTTCCCTTCTTTGGA+GGG 0.475453 4.4:+2541351 None:intergenic
TGTAACTGGGGATAGACTTA+AGG 0.475596 4.4:-2540278 MS.gene05845:CDS
ACTACAGTACCCAGAGAATT+GGG 0.476217 4.4:-2544558 MS.gene05845:CDS
GTCATTAAGTTGATGGACAT+TGG 0.476978 4.4:-2540543 MS.gene05845:CDS
TTGTCAATTTAGTTCCCTAC+AGG 0.477464 4.4:-2541913 MS.gene05845:intron
TTCTTCCCCACCATTTGGTG+TGG 0.481181 4.4:-2543723 MS.gene05845:CDS
TCCTTGATTTGCACACACTT+GGG 0.481299 4.4:-2540641 MS.gene05845:CDS
GAAGAAGACTATTTAACCAT+TGG 0.487527 4.4:+2544347 None:intergenic
TCCCAAGTGTGTGCAAATCA+AGG 0.488526 4.4:+2540640 None:intergenic
CTTGTTGAGAAAGGTTTCAC+AGG 0.492523 4.4:-2542733 MS.gene05845:CDS
TTCGGCCCTGCCGCAACTCA+AGG 0.493045 4.4:-2541300 MS.gene05845:intron
AGAGTTTCCTCAGTTGAACT+AGG 0.493118 4.4:-2539946 MS.gene05845:CDS
CTGTAGTCTTTATGCCAGAT+GGG 0.493266 4.4:+2544574 None:intergenic
TTCCTGTTGTCCACACCAAA+TGG 0.497035 4.4:+2543713 None:intergenic
ACGGGGAACATGCTAGCATC+TGG 0.497721 4.4:+2540582 None:intergenic
CCAGAACTGTTCAAGCGGTA+AGG 0.498338 4.4:-2539051 MS.gene05845:CDS
GTGGTAAATCCCTCCAAAGA+AGG 0.504014 4.4:-2541360 MS.gene05845:CDS
TGACAACACTTAATAGCGAC+TGG 0.504078 4.4:+2542929 None:intergenic
CTTTAGGTGTTCCAATACTA+GGG 0.505709 4.4:+2538590 None:intergenic
CCAGAAACTGAAATCATTGT+GGG 0.507666 4.4:-2541812 MS.gene05845:intron
ATTCCATTGAAAATGTCCTT+CGG 0.509123 4.4:+2544531 None:intergenic
CTCAATTCATGTTCGTGGGA+AGG 0.509216 4.4:-2540380 MS.gene05845:CDS
CTTAGGTTGCTTGTCCCACT+AGG 0.510141 4.4:-2544614 None:intergenic
GAAAGCGTCGAGAGAAGAAA+CGG 0.511299 4.4:-2542892 MS.gene05845:CDS
CAGATGTGGTAGATGGCATT+CGG 0.514146 4.4:+2539020 None:intergenic
TTACCTTCAACTGTTGAAGC+TGG 0.516926 4.4:+2542360 None:intergenic
GGGATCTATGAAGCCTGTTG+TGG 0.518123 4.4:-2543858 MS.gene05845:CDS
GTGGTCTCAATTCATGTTCG+TGG 0.519380 4.4:-2540385 MS.gene05845:CDS
AATAAACCTTGAGTTGCGGC+AGG 0.519535 4.4:+2541294 None:intergenic
ATACCTGATGATTTCTTTGG+GGG 0.522385 4.4:+2538986 None:intergenic
AGGTATCTTATACCTTCTCT+AGG 0.522675 4.4:+2544003 None:intergenic
ACTGTAGTCTTTATGCCAGA+TGG 0.522951 4.4:+2544573 None:intergenic
CACAGTTGGAAGAAGAAACC+AGG 0.523954 4.4:-2542085 MS.gene05845:CDS
TTTGTTGAGAAGTCCAATGA+AGG 0.525056 4.4:+2544325 None:intergenic
ATTAAGCAAGATGCTATGAA+AGG 0.527162 4.4:-2541784 MS.gene05845:CDS
TTTGCTACAGATGTGGTAGA+TGG 0.530557 4.4:+2539013 None:intergenic
TTTCTGACAACAAGGAGTCT+CGG 0.533949 4.4:-2539517 MS.gene05845:CDS
AAGTCTGGTTCTACCATGCA+TGG 0.537382 4.4:-2540352 MS.gene05845:CDS
TTAAGCAAGATGCTATGAAA+GGG 0.544509 4.4:-2541783 MS.gene05845:CDS
TTTCTTAGAAATACCACTGA+CGG 0.546949 4.4:+2539700 None:intergenic
GCTGTTTCTATATGGTACAT+GGG 0.547626 4.4:+2540186 None:intergenic
TATACCTGATGATTTCTTTG+GGG 0.547863 4.4:+2538985 None:intergenic
ACGTTTCTGAAAGCTTTGGA+TGG 0.550857 4.4:-2544056 MS.gene05845:CDS
TCGAGTACCGATCTTACAAA+AGG 0.555854 4.4:+2541075 None:intergenic
AGGTCTGATATTTCAAACCT+TGG 0.556672 4.4:+2544023 None:intergenic
CTCTTCAATATAGGATGAGA+AGG 0.556956 4.4:-2542243 MS.gene05845:intron
TTGACTCAATCTCAATCATA+CGG 0.558775 4.4:-2540615 MS.gene05845:CDS
AGGTGATATCAAACAACGAA+TGG 0.562769 4.4:-2539411 MS.gene05845:CDS
AGGTGATATCAAACAACGAA+TGG 0.562769 4.4:-2539636 MS.gene05845:CDS
TGAAGCGAAATGCTCACAGT+TGG 0.563127 4.4:-2542099 MS.gene05845:CDS
ATCTACCACATCTGTAGCAA+AGG 0.563240 4.4:-2539011 MS.gene05845:CDS
ATCAACTTAATGACATCTGA+AGG 0.565636 4.4:+2540552 None:intergenic
AAAGAAGTAGCCGTTCTCAC+AGG 0.566849 4.4:-2540482 MS.gene05845:intron
TGGATGGATTGGGATTGCCA+AGG 0.567685 4.4:-2544040 MS.gene05845:CDS
TATGAGGCTTCCTCTGCTTG+TGG 0.568259 4.4:+2540830 None:intergenic
TTCAGAATTTCCACAAGCAG+AGG 0.568490 4.4:-2540840 MS.gene05845:CDS
GGGGTCCTTTGCTACAGATG+TGG 0.569091 4.4:+2539006 None:intergenic
TCCAGAAACTGAAATCATTG+TGG 0.570027 4.4:-2541813 MS.gene05845:intron
TTTGTAAGATCGGTACTCGA+TGG 0.570490 4.4:-2541072 MS.gene05845:CDS
CAGTCTATTGTAGAAGACAT+AGG 0.571368 4.4:-2541399 MS.gene05845:CDS
CTGTTGTCCACACCAAATGG+TGG 0.571386 4.4:+2543716 None:intergenic
TCGCTATTAAGTGTTGTCAA+TGG 0.571393 4.4:-2542925 MS.gene05845:CDS
CGTGGAACTTATGACCAACC+TGG 0.575056 4.4:+2543176 None:intergenic
AGGTGAAAGTGATTTGGTTG+TGG 0.575266 4.4:-2541379 MS.gene05845:CDS
TCCATTCGCCTGAAAAGGCT+AGG 0.575686 4.4:-2539592 MS.gene05845:CDS
TCCGTTCACCTGAAAAGGCT+AGG 0.576096 4.4:-2539367 MS.gene05845:CDS
TACCTGATGATTTCTTTGGG+GGG 0.577064 4.4:+2538987 None:intergenic
TGGTATATTAATGAAGCTGA+TGG 0.578057 4.4:+2543196 None:intergenic
TTCGGACTACCCAATTCTCT+GGG 0.578232 4.4:+2544549 None:intergenic
TCACCGGACCCGCCATAGAA+GGG 0.578658 4.4:+2543648 None:intergenic
AAAGATTTAACCTGTGAGAA+CGG 0.579504 4.4:+2540472 None:intergenic
TGGTCTCAATTCATGTTCGT+GGG 0.580421 4.4:-2540384 MS.gene05845:CDS
TGGTAAATCCCTCCAAAGAA+GGG 0.581758 4.4:-2541359 MS.gene05845:CDS
ATCAGCTTCATTAATATACC+AGG 0.584560 4.4:-2543194 MS.gene05845:CDS
TATAAATAAACCTTGAGTTG+CGG 0.584775 4.4:+2541290 None:intergenic
TATTCGCTTATGGCCAAACC+GGG 0.584822 4.4:-2541035 MS.gene05845:CDS
CAAATGAAGATTACCATGCA+TGG 0.585102 4.4:+2540339 None:intergenic
TCCAATGCATCAAGCCCTCG+TGG 0.586021 4.4:-2543767 MS.gene05845:CDS
TAGATCGATCTGATGTAACT+GGG 0.587217 4.4:-2540291 MS.gene05845:CDS
ATTACCATAGTTACGGGACC+AGG 0.587388 4.4:+2544229 None:intergenic
TGTTGTCCACACCAAATGGT+GGG 0.588918 4.4:+2543717 None:intergenic
CTGTTTCTATATGGTACATG+GGG 0.589847 4.4:+2540187 None:intergenic
GAACACCTAAAGCTCCAAAA+CGG 0.591804 4.4:-2538579 MS.gene05845:CDS
AGGGAAAACCGTTTATGTAG+AGG 0.593319 4.4:-2541764 MS.gene05845:CDS
TCACTGAACGCCTCCGTCAG+TGG 0.595960 4.4:-2539713 MS.gene05845:CDS
CGGATTCAAAATATCAGGAG+TGG 0.598843 4.4:-2541971 MS.gene05845:CDS
TCACTGAGCGCGTCCGTCGG+TGG 0.599386 4.4:-2539488 MS.gene05845:CDS
GACAACAATAGTCTTGCTCT+CGG 0.600715 4.4:-2539287 MS.gene05845:CDS
TTCTCAACAAATGTCACAGA+TGG 0.602993 4.4:-2544313 MS.gene05845:CDS
TTCATTACTAGGTTCCTAGT+GGG 0.606226 4.4:+2544600 None:intergenic
AACACTTAATAGCGACTGGG+TGG 0.606247 4.4:+2542933 None:intergenic
AAGGCTAGGCGAGTAACTCA+AGG 0.607220 4.4:-2539353 MS.gene05845:CDS
AAGGCTAGGCGAGTAACTCA+AGG 0.607220 4.4:-2539578 MS.gene05845:CDS
AAATCACTGAGCGCGTCCGT+CGG 0.607472 4.4:-2539491 MS.gene05845:CDS
TGGAACTAGAGAAGAGAGTG+AGG 0.608664 4.4:-2542508 MS.gene05845:intron
GGAAGCTTACATCTGAGTCA+AGG 0.612208 4.4:-2543694 MS.gene05845:CDS
GTTTGATATCACCTTCAACA+AGG 0.612933 4.4:+2539420 None:intergenic
GTTTGATATCACCTTCAACA+AGG 0.612933 4.4:+2539645 None:intergenic
AACAGTCAATGTGAGGTGGA+AGG 0.613000 4.4:-2544486 MS.gene05845:intron
GCTTCATTAATATACCAGGT+TGG 0.616851 4.4:-2543190 MS.gene05845:CDS
TGCTTGTGGAAATTCTGAAG+AGG 0.620627 4.4:+2540844 None:intergenic
GTCAAGAATAAGAGTACTCG+AGG 0.624179 4.4:-2542541 MS.gene05845:CDS
ATTCATTACTAGGTTCCTAG+TGG 0.626493 4.4:+2544599 None:intergenic
GCTCTCGGCACAGAAACTGA+TGG 0.627230 4.4:-2539272 MS.gene05845:CDS
CAGAGAATTGGGTAGTCCGA+AGG 0.627997 4.4:-2544547 MS.gene05845:CDS
TTCTGAGATGCATGTATGAG+TGG 0.628179 4.4:+2541618 None:intergenic
GGCAAAGATTACATCTCCGA+GGG 0.630186 4.4:+2540225 None:intergenic
ATTATCCAGAACTGTTCAAG+CGG 0.630315 4.4:-2539056 MS.gene05845:CDS
TGAAATATCAGACCTAGAGA+AGG 0.633727 4.4:-2544015 MS.gene05845:intron
GTTGTCCACACCAAATGGTG+GGG 0.633986 4.4:+2543718 None:intergenic
AGTAAACAGTCAATGTGAGG+TGG 0.636730 4.4:-2544490 MS.gene05845:CDS
AGGAGCTGCACGAAATAACA+AGG 0.643060 4.4:-2539926 MS.gene05845:CDS
CCAATGCATCAAGCCCTCGT+GGG 0.645424 4.4:-2543766 MS.gene05845:CDS
CTTAGAAATACCACTGACGG+AGG 0.648827 4.4:+2539703 None:intergenic
ACACTTAATAGCGACTGGGT+GGG 0.660957 4.4:+2542934 None:intergenic
GACAACACTTAATAGCGACT+GGG 0.660965 4.4:+2542930 None:intergenic
ATAAACCTTGAGTTGCGGCA+GGG 0.661991 4.4:+2541295 None:intergenic
TGTAGTCTTTATGCCAGATG+GGG 0.663824 4.4:+2544575 None:intergenic
TGTAGTAAACAGTCAATGTG+AGG 0.665373 4.4:-2544493 MS.gene05845:CDS
GTTCTGCTTGTGTTGATATG+CGG 0.666991 4.4:+2542700 None:intergenic
TGCAGCTCCTAGTTCAACTG+AGG 0.670154 4.4:+2539939 None:intergenic
TTAAGAGCATGCTTGAGCAG+TGG 0.671840 4.4:-2544286 MS.gene05845:CDS
TAGGTTGACGAAAATGCTAG+AGG 0.672188 4.4:-2542180 MS.gene05845:CDS
GGGCAAAGATTACATCTCCG+AGG 0.679565 4.4:+2540224 None:intergenic
CACCTAAAGCTCCAAAACGG+TGG 0.682166 4.4:-2538576 MS.gene05845:CDS
ATACTAAACAAACTACGACC+TGG 0.683316 4.4:-2544247 MS.gene05845:CDS
TCTCTTAGAAATACCACCGA+CGG 0.689341 4.4:+2539475 None:intergenic
GGAGCAACAAGTGAGAAACT+CGG 0.693735 4.4:-2540891 MS.gene05845:CDS
TCGAAGATCCATACCCACGA+GGG 0.701487 4.4:+2543753 None:intergenic
AGTATCGACTCGAAGAACTG+AGG 0.702986 4.4:-2542022 MS.gene05845:CDS
CTCGAAGATCCATACCCACG+AGG 0.704068 4.4:+2543752 None:intergenic
AGATCGATCTGATGTAACTG+GGG 0.710642 4.4:-2540290 MS.gene05845:CDS
ACAGTTGGAAGAAGAAACCA+GGG 0.711857 4.4:-2542084 MS.gene05845:CDS
ATAGGATGAGAAGGTCACAG+AGG 0.726695 4.4:-2542234 MS.gene05845:intron
GGTTGGTCATAAGTTCCACG+AGG 0.747813 4.4:-2543173 MS.gene05845:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTAAAGATATTTTTAAAAA+AGG + chr4.4:2542462-2542481 None:intergenic 10.0%
!! AAAACGAAAAAGAAATAATT+AGG - chr4.4:2540980-2540999 MS.gene05845:intron 15.0%
!! AAAATTTGAAGGAATATATA+AGG + chr4.4:2540740-2540759 None:intergenic 15.0%
!! AAAGTGATAATTTACTATAT+AGG - chr4.4:2544482-2544501 MS.gene05845:intron 15.0%
!! AATTACATTCAAATGATTAA+AGG + chr4.4:2541520-2541539 None:intergenic 15.0%
!!! TTTAAAAAAGGATATCTTTT+TGG + chr4.4:2542450-2542469 None:intergenic 15.0%
!!! TTTAAATTCAACAAGATTTT+CGG - chr4.4:2541861-2541880 MS.gene05845:intron 15.0%
!! AAAAGTTTGATGAATTCTTT+GGG - chr4.4:2539367-2539386 MS.gene05845:CDS 20.0%
!! AAAATCCAATTTCATAAACA+CGG - chr4.4:2539615-2539634 MS.gene05845:CDS 20.0%
!! AAACATTACAACTAAAACTA+AGG + chr4.4:2542017-2542036 None:intergenic 20.0%
!! AATAAAAAGCTTTCATTTCA+AGG + chr4.4:2542742-2542761 None:intergenic 20.0%
!! AATGAAGTTCAAGAATTAAA+AGG - chr4.4:2541621-2541640 MS.gene05845:CDS 20.0%
!! AATTTACTTCAACAATACAT+TGG - chr4.4:2538996-2539015 MS.gene05845:CDS 20.0%
!! ACAATATTTATGAAACTGTA+TGG + chr4.4:2540394-2540413 None:intergenic 20.0%
!! ACACTTACATAATATACAAA+AGG + chr4.4:2541672-2541691 None:intergenic 20.0%
!! ATAAAATCAATATGTCAAGA+GGG + chr4.4:2542198-2542217 None:intergenic 20.0%
!! ATAATCTATGCATAAAATCA+CGG + chr4.4:2539221-2539240 None:intergenic 20.0%
!! ATATTGATATACTATAGACA+CGG - chr4.4:2540871-2540890 MS.gene05845:CDS 20.0%
!! ATGAGTTTAATAAAATTCAC+CGG + chr4.4:2539550-2539569 None:intergenic 20.0%
!! CACTTACATAATATACAAAA+GGG + chr4.4:2541671-2541690 None:intergenic 20.0%
!! TATAAAATCAATATGTCAAG+AGG + chr4.4:2542199-2542218 None:intergenic 20.0%
!! TTCTTGTATTTATAAGTGAT+TGG - chr4.4:2539933-2539952 MS.gene05845:CDS 20.0%
!!! AAAATTCAAAAAGTATCAAG+TGG - chr4.4:2543499-2543518 MS.gene05845:intron 20.0%
!!! ACATTTTTTTATTTTCAGCA+AGG + chr4.4:2541599-2541618 None:intergenic 20.0%
!!! TACCAATTTTCAAAATTTGA+AGG + chr4.4:2540751-2540770 None:intergenic 20.0%
!!! TCTAGTCATATTTTTAAAAG+TGG - chr4.4:2540712-2540731 MS.gene05845:intron 20.0%
!!! TGTTATTTTTGTTTGTTTAG+CGG - chr4.4:2540415-2540434 MS.gene05845:intron 20.0%
!!! TTCCTTCAAATTTTGAAAAT+TGG - chr4.4:2540746-2540765 MS.gene05845:intron 20.0%
!!! TTTCTTCACAATTTAATTTC+AGG - chr4.4:2544554-2544573 MS.gene05845:CDS 20.0%
! AAATGACATTCTAACAACAA+AGG + chr4.4:2541461-2541480 None:intergenic 25.0%
! AAGCACAAAATTGTAATGTT+TGG + chr4.4:2541334-2541353 None:intergenic 25.0%
! AATCACGGTACAAAAAAAAT+AGG + chr4.4:2539206-2539225 None:intergenic 25.0%
! AATGAATTTAACTCCTCTAA+AGG - chr4.4:2544327-2544346 MS.gene05845:CDS 25.0%
! AATGTATGTATATTCGCTTA+TGG - chr4.4:2542134-2542153 MS.gene05845:CDS 25.0%
! AATTTATAACAGTCTGCAAT+TGG + chr4.4:2541248-2541267 None:intergenic 25.0%
! ACAAAAAAATCCAGATTGAA+AGG + chr4.4:2539050-2539069 None:intergenic 25.0%
! AGAGAAGAAAAAGCTAATAA+GGG + chr4.4:2542514-2542533 None:intergenic 25.0%
! ATACAAGAACGCAATATAAT+CGG + chr4.4:2539922-2539941 None:intergenic 25.0%
! ATATACCTGATGATTTCTTT+GGG + chr4.4:2544198-2544217 None:intergenic 25.0%
! ATCGATAGTTAATGAATCAT+CGG - chr4.4:2544376-2544395 MS.gene05845:intron 25.0%
! ATCTGAATACATGTATCTAA+AGG + chr4.4:2540130-2540149 None:intergenic 25.0%
! CAATGTCAATGTTATAATTG+TGG - chr4.4:2541306-2541325 MS.gene05845:CDS 25.0%
! GAAAAGTTTGATGAATTCTT+TGG - chr4.4:2539366-2539385 MS.gene05845:CDS 25.0%
! GTATTCAATTTACATGAACA+AGG + chr4.4:2543310-2543329 None:intergenic 25.0%
! GTTAATGAGAAAACTTATCT+AGG - chr4.4:2539644-2539663 MS.gene05845:CDS 25.0%
! TAGACTCAAATATCAATTGA+TGG - chr4.4:2544434-2544453 MS.gene05845:intron 25.0%
! TATTGATATACTATAGACAC+GGG - chr4.4:2540872-2540891 MS.gene05845:CDS 25.0%
! TCAATGGAATTGATAGAATT+GGG - chr4.4:2538661-2538680 MS.gene05845:intron 25.0%
! TTCAATGGAATTGATAGAAT+TGG - chr4.4:2538660-2538679 MS.gene05845:intron 25.0%
! TTCATGTAAATTGAATACGT+CGG - chr4.4:2543312-2543331 MS.gene05845:intron 25.0%
!! AATTTTCATCTCTGGATATA+AGG + chr4.4:2541956-2541975 None:intergenic 25.0%
!! GTTTTTCCTTTTTGTCTATA+AGG + chr4.4:2541761-2541780 None:intergenic 25.0%
!! TATAAATAAACCTTGAGTTG+CGG + chr4.4:2541892-2541911 None:intergenic 25.0%
!! TCAGCAAAGTAATCTTTTTA+AGG - chr4.4:2540596-2540615 MS.gene05845:CDS 25.0%
!! TTAACATTTTCTGATTGTGA+TGG + chr4.4:2539102-2539121 None:intergenic 25.0%
!!! AAAGTAATCTTTTTAAGGCT+CGG - chr4.4:2540601-2540620 MS.gene05845:CDS 25.0%
!!! AATCTGGATTTTTTTGTTGT+AGG - chr4.4:2539053-2539072 MS.gene05845:CDS 25.0%
!!! AGAAAGTATTACCATAGTTA+CGG + chr4.4:2538960-2538979 None:intergenic 25.0%
!!! AGAATTCAAAAAGTATCAAG+TGG - chr4.4:2543724-2543743 MS.gene05845:CDS 25.0%
!!! CACTATTTTGAAAAAAGATG+AGG - chr4.4:2543426-2543445 MS.gene05845:intron 25.0%
!!! CATCATTTCTGATATTTTTG+CGG + chr4.4:2540071-2540090 None:intergenic 25.0%
!!! CATTTGAATGTAATTTGTTC+AGG - chr4.4:2541525-2541544 MS.gene05845:intron 25.0%
!!! GTTATTTTTGTTTGTTTAGC+GGG - chr4.4:2540416-2540435 MS.gene05845:intron 25.0%
!!! TCGTTTTTATAGTACAAGTT+AGG + chr4.4:2539713-2539732 None:intergenic 25.0%
!!! TCTATTCCATTTTTGAGATT+AGG - chr4.4:2541915-2541934 MS.gene05845:CDS 25.0%
!!! TTTCGCTTCATATGTTTTTT+TGG + chr4.4:2541070-2541089 None:intergenic 25.0%
!!! TTTTTTATTTTCAGCAAGGA+CGG + chr4.4:2541595-2541614 None:intergenic 25.0%
AAACTGTAATATCGATACAC+AGG + chr4.4:2541992-2542011 None:intergenic 30.0%
AAAGATTTAACCTGTGAGAA+CGG + chr4.4:2542710-2542729 None:intergenic 30.0%
AAATAGTCTTCTTCCTTCAT+TGG - chr4.4:2538841-2538860 MS.gene05845:intron 30.0%
AATGCTAGAGGACAAAAATT+TGG - chr4.4:2541011-2541030 MS.gene05845:intron 30.0%
ACCATTCCTTATAGACAAAA+AGG - chr4.4:2541752-2541771 MS.gene05845:CDS 30.0%
AGATGTTAAGAACGATGTAA+CGG + chr4.4:2540522-2540541 None:intergenic 30.0%
ATCAACTTAATGACATCTGA+AGG + chr4.4:2542630-2542649 None:intergenic 30.0%
ATCAGCTTCATTAATATACC+AGG - chr4.4:2539985-2540004 MS.gene05845:CDS 30.0%
ATGTTCATCTGCTTAACTTT+CGG - chr4.4:2543055-2543074 MS.gene05845:intron 30.0%
ATTAAAAGACAATCCACAAC+AGG + chr4.4:2539337-2539356 None:intergenic 30.0%
ATTAAGCAAGATGCTATGAA+AGG - chr4.4:2541395-2541414 MS.gene05845:CDS 30.0%
ATTACACTCCTCTACATAAA+CGG + chr4.4:2541426-2541445 None:intergenic 30.0%
ATTCCATTGAAAATGTCCTT+CGG + chr4.4:2538651-2538670 None:intergenic 30.0%
CAGAGAAGAAAAAGCTAATA+AGG + chr4.4:2542515-2542534 None:intergenic 30.0%
CATATACCTGATGATTTCTT+TGG + chr4.4:2544199-2544218 None:intergenic 30.0%
GAAGAAGACTATTTAACCAT+TGG + chr4.4:2538835-2538854 None:intergenic 30.0%
GGACTTAAAAATAGAGCAAT+CGG - chr4.4:2542657-2542676 MS.gene05845:intron 30.0%
GTACAAAAAAAATAGGTGCT+AGG + chr4.4:2539199-2539218 None:intergenic 30.0%
TATACCTGATGATTTCTTTG+GGG + chr4.4:2544197-2544216 None:intergenic 30.0%
TGGTATATTAATGAAGCTGA+TGG + chr4.4:2539986-2540005 None:intergenic 30.0%
TTAAGCAAGATGCTATGAAA+GGG - chr4.4:2541396-2541415 MS.gene05845:CDS 30.0%
TTCAGAATTGAAGCAAAAAC+TGG - chr4.4:2541038-2541057 MS.gene05845:CDS 30.0%
TTCTTCGGATTCAAAATATC+AGG - chr4.4:2541203-2541222 MS.gene05845:intron 30.0%
TTGACTCAATCTCAATCATA+CGG - chr4.4:2542564-2542583 MS.gene05845:CDS 30.0%
TTTCATAGCATCTTGCTTAA+TGG + chr4.4:2541396-2541415 None:intergenic 30.0%
TTTCTTAGAAATACCACTGA+CGG + chr4.4:2543482-2543501 None:intergenic 30.0%
! AACTAACAGCATATTTTCAG+AGG - chr4.4:2544005-2544024 MS.gene05845:intron 30.0%
! AAGTGATTTTTCTGACAACA+AGG - chr4.4:2543654-2543673 MS.gene05845:intron 30.0%
! AATGGAGAAACTCAGTTTTA+TGG + chr4.4:2543573-2543592 None:intergenic 30.0%
! AGAAGGTGATTTGTACAATA+AGG + chr4.4:2542248-2542267 None:intergenic 30.0%
! CAATTTTGCTTTCAGAATTC+AGG - chr4.4:2539020-2539039 MS.gene05845:CDS 30.0%
! CATTCAACCTTTTGTAAGAT+CGG - chr4.4:2542097-2542116 MS.gene05845:CDS 30.0%
! TAAAACGTTTCTGAAAGCTT+TGG - chr4.4:2539119-2539138 MS.gene05845:intron 30.0%
! TACCATTGTGTAAGTTTTTC+CGG + chr4.4:2542171-2542190 None:intergenic 30.0%
! TCCTTTTTGTCTATAAGGAA+TGG + chr4.4:2541756-2541775 None:intergenic 30.0%
! TGATGCAAAATTTTCATCTC+TGG + chr4.4:2541964-2541983 None:intergenic 30.0%
!! AATTTTGATCTGTGTTTTGC+AGG - chr4.4:2544092-2544111 MS.gene05845:CDS 30.0%
!! CACACATTGTTTTATGATAC+AGG - chr4.4:2541702-2541721 MS.gene05845:intron 30.0%
!! GAAAGTATTACCATAGTTAC+GGG + chr4.4:2538959-2538978 None:intergenic 30.0%
!! GAGGTTTTTCAAATTAAACC+TGG - chr4.4:2540025-2540044 MS.gene05845:CDS 30.0%
!! GTTTAATTTGAAAAACCTCG+TGG + chr4.4:2540024-2540043 None:intergenic 30.0%
!! TTCAGATGTCATTAAGTTGA+TGG - chr4.4:2542629-2542648 MS.gene05845:intron 30.0%
!!! AAGTAATCTTTTTAAGGCTC+GGG - chr4.4:2540602-2540621 MS.gene05845:CDS 30.0%
!!! ACATTTTTAAGTGTACCTGT+AGG + chr4.4:2541284-2541303 None:intergenic 30.0%
!!! ACTGTCTCTTTTGTTGTTTA+GGG - chr4.4:2539301-2539320 MS.gene05845:CDS 30.0%
!!! CATTTTTAAGTGTACCTGTA+GGG + chr4.4:2541283-2541302 None:intergenic 30.0%
!!! CTTATTAGCTTTTTCTTCTC+TGG - chr4.4:2542513-2542532 MS.gene05845:CDS 30.0%
AAAAAGATGAGGAGATTGAG+AGG - chr4.4:2543437-2543456 MS.gene05845:intron 35.0%
ACCATAAAAAGCCCTAGTAT+TGG - chr4.4:2544578-2544597 MS.gene05845:CDS 35.0%
ACTACAAATGTCCTTCACAA+AGG + chr4.4:2539862-2539881 None:intergenic 35.0%
AGACATAGGTGAAAGTGATT+TGG - chr4.4:2541794-2541813 MS.gene05845:CDS 35.0%
AGGTATCTTATACCTTCTCT+AGG + chr4.4:2539179-2539198 None:intergenic 35.0%
AGGTCTGATATTTCAAACCT+TGG + chr4.4:2539159-2539178 None:intergenic 35.0%
AGGTGATATCAAACAACGAA+TGG - chr4.4:2543543-2543562 MS.gene05845:intron 35.0%
ATACCTGATGATTTCTTTGG+GGG + chr4.4:2544196-2544215 None:intergenic 35.0%
ATACTAAACAAACTACGACC+TGG - chr4.4:2538932-2538951 MS.gene05845:intron 35.0%
ATCTCCTAAAAGTCCTTTAG+AGG + chr4.4:2544343-2544362 None:intergenic 35.0%
ATGTACATCTTTCCCTTCTT+TGG + chr4.4:2541835-2541854 None:intergenic 35.0%
ATGTTCCGACTCTTCAATAT+AGG - chr4.4:2540927-2540946 MS.gene05845:intron 35.0%
ATTATCCAGAACTGTTCAAG+CGG - chr4.4:2544123-2544142 MS.gene05845:intron 35.0%
ATTCATTACTAGGTTCCTAG+TGG + chr4.4:2538583-2538602 None:intergenic 35.0%
ATTCCCTAAGCAATGTTATC+TGG - chr4.4:2539682-2539701 MS.gene05845:CDS 35.0%
CAAAAGGGAGAAAAAAGACA+TGG + chr4.4:2541656-2541675 None:intergenic 35.0%
CAAATGAAGATTACCATGCA+TGG + chr4.4:2542843-2542862 None:intergenic 35.0%
CAGTCTATTGTAGAAGACAT+AGG - chr4.4:2541780-2541799 MS.gene05845:CDS 35.0%
CATCATTCAGAGTAGAATCA+TGG + chr4.4:2542056-2542075 None:intergenic 35.0%
CATGCATGGTAATCTTCATT+TGG - chr4.4:2542841-2542860 MS.gene05845:intron 35.0%
CCAGAAACTGAAATCATTGT+GGG - chr4.4:2541367-2541386 MS.gene05845:CDS 35.0%
CCATAGCCTAATCTCAAAAA+TGG + chr4.4:2541924-2541943 None:intergenic 35.0%
CCCAGTAGAAGAATATGAAA+GGG + chr4.4:2541491-2541510 None:intergenic 35.0%
CCCTTTCATATTCTTCTACT+GGG - chr4.4:2541488-2541507 MS.gene05845:intron 35.0%
CCTCATAGACTATGAGATTT+GGG - chr4.4:2542365-2542384 MS.gene05845:CDS 35.0%
CTAAACAACAAAAGAGACAG+TGG + chr4.4:2539302-2539321 None:intergenic 35.0%
CTACAAATGTCCTTCACAAA+GGG + chr4.4:2539861-2539880 None:intergenic 35.0%
CTCATCCTATATTGAAGAGT+CGG + chr4.4:2540935-2540954 None:intergenic 35.0%
CTCTTCAATATAGGATGAGA+AGG - chr4.4:2540936-2540955 MS.gene05845:intron 35.0%
CTTTAGGTGTTCCAATACTA+GGG + chr4.4:2544592-2544611 None:intergenic 35.0%
GCTTCATTAATATACCAGGT+TGG - chr4.4:2539989-2540008 MS.gene05845:CDS 35.0%
GTCAGAGTACATGAAACAAA+AGG + chr4.4:2543359-2543378 None:intergenic 35.0%
GTTTGATATCACCTTCAACA+AGG + chr4.4:2543537-2543556 None:intergenic 35.0%
TAAGGAGATTGAGGATTCTT+CGG - chr4.4:2541188-2541207 MS.gene05845:intron 35.0%
TAGATCGATCTGATGTAACT+GGG - chr4.4:2542888-2542907 MS.gene05845:CDS 35.0%
TCCAGAAACTGAAATCATTG+TGG - chr4.4:2541366-2541385 MS.gene05845:CDS 35.0%
TCCCAGTAGAAGAATATGAA+AGG + chr4.4:2541492-2541511 None:intergenic 35.0%
TCCCTTTCATATTCTTCTAC+TGG - chr4.4:2541487-2541506 MS.gene05845:intron 35.0%
TGAAATATCAGACCTAGAGA+AGG - chr4.4:2539164-2539183 MS.gene05845:intron 35.0%
TGTAGTAAACAGTCAATGTG+AGG - chr4.4:2538686-2538705 MS.gene05845:intron 35.0%
TGTCACCGTGTTTATGAAAT+TGG + chr4.4:2539623-2539642 None:intergenic 35.0%
TTCAGGTATACCTTTCAATC+TGG - chr4.4:2539037-2539056 MS.gene05845:CDS 35.0%
TTCATTACTAGGTTCCTAGT+GGG + chr4.4:2538582-2538601 None:intergenic 35.0%
TTCCCAGATAACATTGCTTA+GGG + chr4.4:2539688-2539707 None:intergenic 35.0%
TTCCCTAAGCAATGTTATCT+GGG - chr4.4:2539683-2539702 MS.gene05845:CDS 35.0%
TTCTCAACAAATGTCACAGA+TGG - chr4.4:2538866-2538885 MS.gene05845:intron 35.0%
TTTGTTGAGAAGTCCAATGA+AGG + chr4.4:2538857-2538876 None:intergenic 35.0%
! AACGGAGAAACTCAGTTTTA+TGG + chr4.4:2543798-2543817 None:intergenic 35.0%
! ACATCTGAAGGTGATTTTAC+GGG + chr4.4:2542618-2542637 None:intergenic 35.0%
! AGCTAAACATCGATCAGTTT+TGG - chr4.4:2538808-2538827 MS.gene05845:intron 35.0%
! ATCCTTCTTTAGAAGAAGAG+AGG - chr4.4:2539817-2539836 MS.gene05845:intron 35.0%
! CTATGAGATTTGGGTTCAAA+TGG - chr4.4:2542374-2542393 MS.gene05845:CDS 35.0%
! GACATCTGAAGGTGATTTTA+CGG + chr4.4:2542619-2542638 None:intergenic 35.0%
! TCCAATACTAGGGCTTTTTA+TGG + chr4.4:2544582-2544601 None:intergenic 35.0%
! TCGCTATTAAGTGTTGTCAA+TGG - chr4.4:2540254-2540273 MS.gene05845:CDS 35.0%
! TCTTTAGAAGAAGAGAGGAA+CGG - chr4.4:2539822-2539841 MS.gene05845:intron 35.0%
! TGTATCTAAAGGTTGACTTC+AGG + chr4.4:2540119-2540138 None:intergenic 35.0%
! TTCCTCTCTTCTTCTAAAGA+AGG + chr4.4:2539822-2539841 None:intergenic 35.0%
! TTGTCAATTTAGTTCCCTAC+AGG - chr4.4:2541266-2541285 MS.gene05845:intron 35.0%
!! AACTCCTCTAAAGGACTTTT+AGG - chr4.4:2544336-2544355 MS.gene05845:CDS 35.0%
!! ATTTCTGATATTTTTGCGGC+AGG + chr4.4:2540067-2540086 None:intergenic 35.0%
!! ATTTTTGTTTGTTTAGCGGG+TGG - chr4.4:2540419-2540438 MS.gene05845:intron 35.0%
!! CGACTTATCTGAAGTCTTTT+TGG + chr4.4:2543962-2543981 None:intergenic 35.0%
!! CTGTTTCTATATGGTACATG+GGG + chr4.4:2542995-2543014 None:intergenic 35.0%
!! GCTGTTTCTATATGGTACAT+GGG + chr4.4:2542996-2543015 None:intergenic 35.0%
!! GTAAGCTTGCTGTTTCTATA+TGG + chr4.4:2543004-2543023 None:intergenic 35.0%
!! GTCATTAAGTTGATGGACAT+TGG - chr4.4:2542636-2542655 MS.gene05845:intron 35.0%
!! GTCGTAGTTTGTTTAGTATC+TGG + chr4.4:2538931-2538950 None:intergenic 35.0%
!! TATGAGTTTTAGCCCTTCTA+TGG - chr4.4:2539519-2539538 MS.gene05845:CDS 35.0%
!! TGCTGTTTCTATATGGTACA+TGG + chr4.4:2542997-2543016 None:intergenic 35.0%
!! TGGTTATTTTCCCTTTGTGA+AGG - chr4.4:2539848-2539867 MS.gene05845:intron 35.0%
!! TGTCTTTGATTTTACTGCAC+AGG - chr4.4:2543122-2543141 MS.gene05845:CDS 35.0%
!!! AGTTTTAAGCACCTTGTTGA+AGG - chr4.4:2543523-2543542 MS.gene05845:intron 35.0%
!!! CACTGTCTCTTTTGTTGTTT+AGG - chr4.4:2539300-2539319 MS.gene05845:CDS 35.0%
!!! CCATTTTTGAGATTAGGCTA+TGG - chr4.4:2541921-2541940 MS.gene05845:CDS 35.0%
AACAAGCACATGCAGAAAGA+AGG + chr4.4:2539578-2539597 None:intergenic 40.0%
AACTGACGTCTGAGTTAATC+TGG + chr4.4:2543175-2543194 None:intergenic 40.0%
ACAAGCACATGCAGAAAGAA+GGG + chr4.4:2539577-2539596 None:intergenic 40.0%
ACAGTTGGAAGAAGAAACCA+GGG - chr4.4:2541095-2541114 MS.gene05845:CDS 40.0%
ACATCTTTCCCTTCTTTGGA+GGG + chr4.4:2541831-2541850 None:intergenic 40.0%
ACGGAGAAATACCTCATGTA+TGG - chr4.4:2540306-2540325 MS.gene05845:CDS 40.0%
ACTACAGTACCCAGAGAATT+GGG - chr4.4:2538621-2538640 MS.gene05845:intron 40.0%
ACTGTAGTCTTTATGCCAGA+TGG + chr4.4:2538609-2538628 None:intergenic 40.0%
AGAACTGAGGAATGCAGTTA+AGG - chr4.4:2541170-2541189 MS.gene05845:intron 40.0%
AGAGTTTCCTCAGTTGAACT+AGG - chr4.4:2543233-2543252 MS.gene05845:intron 40.0%
AGATCGATCTGATGTAACTG+GGG - chr4.4:2542889-2542908 MS.gene05845:CDS 40.0%
AGGGAAAACCGTTTATGTAG+AGG - chr4.4:2541415-2541434 MS.gene05845:CDS 40.0%
AGTAAACAGTCAATGTGAGG+TGG - chr4.4:2538689-2538708 MS.gene05845:intron 40.0%
ATATTCGCTTATGGCCAAAC+CGG - chr4.4:2542143-2542162 MS.gene05845:CDS 40.0%
ATCTACCACATCTGTAGCAA+AGG - chr4.4:2544168-2544187 MS.gene05845:intron 40.0%
CAAGGAGACGAGAGAATTAT+TGG - chr4.4:2543271-2543290 MS.gene05845:intron 40.0%
CAGATGGGGAATTCATTACT+AGG + chr4.4:2538593-2538612 None:intergenic 40.0%
CAGTGTAAGAAAGTGACATG+AGG + chr4.4:2540573-2540592 None:intergenic 40.0%
CCCAAATCTCATAGTCTATG+AGG + chr4.4:2542368-2542387 None:intergenic 40.0%
CCCACAATGATTTCAGTTTC+TGG + chr4.4:2541370-2541389 None:intergenic 40.0%
CGGATTCAAAATATCAGGAG+TGG - chr4.4:2541208-2541227 MS.gene05845:intron 40.0%
CTAGTAATGAATTCCCCATC+TGG - chr4.4:2538591-2538610 MS.gene05845:CDS 40.0%
CTGTAGTCTTTATGCCAGAT+GGG + chr4.4:2538608-2538627 None:intergenic 40.0%
CTTCCCAGATAACATTGCTT+AGG + chr4.4:2539689-2539708 None:intergenic 40.0%
CTTGTTGAGAAAGGTTTCAC+AGG - chr4.4:2540446-2540465 MS.gene05845:intron 40.0%
GAACACCTAAAGCTCCAAAA+CGG - chr4.4:2544600-2544619 MS.gene05845:CDS 40.0%
GAATGCAGTTAAGGAGATTG+AGG - chr4.4:2541179-2541198 MS.gene05845:intron 40.0%
GACAACACTTAATAGCGACT+GGG + chr4.4:2540252-2540271 None:intergenic 40.0%
GACGAGAGAATTATTGGAAC+AGG - chr4.4:2543277-2543296 MS.gene05845:intron 40.0%
GCCTCATAGACTATGAGATT+TGG - chr4.4:2542364-2542383 MS.gene05845:CDS 40.0%
GTAAATTGAATACGTCGGTG+TGG - chr4.4:2543317-2543336 MS.gene05845:intron 40.0%
GTAGATCGATCTGATGTAAC+TGG - chr4.4:2542887-2542906 MS.gene05845:CDS 40.0%
GTCACCTTGAAAGTAAGACA+AGG + chr4.4:2543394-2543413 None:intergenic 40.0%
GTCCGGAAAAACTTACACAA+TGG - chr4.4:2542166-2542185 MS.gene05845:CDS 40.0%
GTTCAAGCGGTAAGGAAATT+TGG - chr4.4:2544136-2544155 MS.gene05845:intron 40.0%
TAAACATTACGTGCACAGTG+TGG - chr4.4:2542775-2542794 MS.gene05845:intron 40.0%
TACATCTTTCCCTTCTTTGG+AGG + chr4.4:2541832-2541851 None:intergenic 40.0%
TACCTGATGATTTCTTTGGG+GGG + chr4.4:2544195-2544214 None:intergenic 40.0%
TAGACACGGGATAATACAAG+AGG - chr4.4:2540885-2540904 MS.gene05845:CDS 40.0%
TCATTTGCAAGCCATACATG+AGG + chr4.4:2540320-2540339 None:intergenic 40.0%
TCTCTTAGAAATACCACCGA+CGG + chr4.4:2543707-2543726 None:intergenic 40.0%
TCTGCCTTGTCTTACTTTCA+AGG - chr4.4:2543387-2543406 MS.gene05845:intron 40.0%
TGACAACACTTAATAGCGAC+TGG + chr4.4:2540253-2540272 None:intergenic 40.0%
TGGTAAATCCCTCCAAAGAA+GGG - chr4.4:2541820-2541839 MS.gene05845:intron 40.0%
TGGTCTCAATTCATGTTCGT+GGG - chr4.4:2542795-2542814 MS.gene05845:intron 40.0%
TGTAACTGGGGATAGACTTA+AGG - chr4.4:2542901-2542920 MS.gene05845:CDS 40.0%
TGTAGTCTTTATGCCAGATG+GGG + chr4.4:2538607-2538626 None:intergenic 40.0%
TTACCTTCAACTGTTGAAGC+TGG + chr4.4:2540822-2540841 None:intergenic 40.0%
TTCAGAATTTCCACAAGCAG+AGG - chr4.4:2542339-2542358 MS.gene05845:intron 40.0%
TTCTACTCTGAATGATGCAC+AGG - chr4.4:2542059-2542078 MS.gene05845:CDS 40.0%
TTTCATTCTTCCCCACCATT+TGG - chr4.4:2539451-2539470 MS.gene05845:CDS 40.0%
TTTCTGACAACAAGGAGTCT+CGG - chr4.4:2543662-2543681 MS.gene05845:CDS 40.0%
TTTGCTACAGATGTGGTAGA+TGG + chr4.4:2544169-2544188 None:intergenic 40.0%
TTTGTAAGATCGGTACTCGA+TGG - chr4.4:2542107-2542126 MS.gene05845:CDS 40.0%
! AGTCCGAAGGACATTTTCAA+TGG - chr4.4:2538645-2538664 MS.gene05845:intron 40.0%
! ATCACCTTCTTTTCTCAGAC+TGG - chr4.4:2542258-2542277 MS.gene05845:intron 40.0%
! CATCTGAAGGTGATTTTACG+GGG + chr4.4:2542617-2542636 None:intergenic 40.0%
! GACAACAATAGTCTTGCTCT+CGG - chr4.4:2543892-2543911 MS.gene05845:intron 40.0%
! GCTTTAGGTGTTCCAATACT+AGG + chr4.4:2544593-2544612 None:intergenic 40.0%
! GTATGGATTACTTGAGCTTG+AGG + chr4.4:2540377-2540396 None:intergenic 40.0%
! GTTCTGCTTGTGTTGATATG+CGG + chr4.4:2540482-2540501 None:intergenic 40.0%
! TAGGTTGACGAAAATGCTAG+AGG - chr4.4:2540999-2541018 MS.gene05845:intron 40.0%
! TGCTTGTGGAAATTCTGAAG+AGG + chr4.4:2542338-2542357 None:intergenic 40.0%
! TTCTCACTTGTTGCTCCATT+TGG + chr4.4:2542285-2542304 None:intergenic 40.0%
!! ACGTTTCTGAAAGCTTTGGA+TGG - chr4.4:2539123-2539142 MS.gene05845:intron 40.0%
!! AGGTGAAAGTGATTTGGTTG+TGG - chr4.4:2541800-2541819 MS.gene05845:CDS 40.0%
!! ATCGATCAGTTTTGGTCCAA+TGG - chr4.4:2538816-2538835 MS.gene05845:intron 40.0%
!! ATGGGGACTCTTTTGAGAAA+GGG + chr4.4:2542978-2542997 None:intergenic 40.0%
!! CTGAAAGCTTTGGATGGATT+GGG - chr4.4:2539129-2539148 MS.gene05845:intron 40.0%
!! CTTTGATTTTACTGCACAGG+CGG - chr4.4:2543125-2543144 MS.gene05845:CDS 40.0%
!! GCATGTGCTTGTTGTACATA+AGG - chr4.4:2539585-2539604 MS.gene05845:CDS 40.0%
!! GTCAAGAATAAGAGTACTCG+AGG - chr4.4:2540638-2540657 MS.gene05845:CDS 40.0%
!! TCCTTGATTTGCACACACTT+GGG - chr4.4:2542538-2542557 MS.gene05845:CDS 40.0%
!! TCGAGTACCGATCTTACAAA+AGG + chr4.4:2542107-2542126 None:intergenic 40.0%
!! TCGTGACTTGTTATCAACTG+AGG - chr4.4:2542419-2542438 MS.gene05845:intron 40.0%
!! TCTGAAAGCTTTGGATGGAT+TGG - chr4.4:2539128-2539147 MS.gene05845:intron 40.0%
!! TTCCTTGATTTGCACACACT+TGG - chr4.4:2542537-2542556 MS.gene05845:CDS 40.0%
!! TTCTGAGATGCATGTATGAG+TGG + chr4.4:2541564-2541583 None:intergenic 40.0%
!! TTTTCTCAGACTGGTCCAAA+TGG - chr4.4:2542267-2542286 MS.gene05845:intron 40.0%
!!! CTTTTTGGCTTCACTCATAC+TGG + chr4.4:2543947-2543966 None:intergenic 40.0%
AAAGAAGTAGCCGTTCTCAC+AGG - chr4.4:2542697-2542716 MS.gene05845:CDS 45.0%
AACAAATCGCTTTCTGCCCT+CGG - chr4.4:2542938-2542957 MS.gene05845:CDS 45.0%
AACACTTAATAGCGACTGGG+TGG + chr4.4:2540249-2540268 None:intergenic 45.0%
AACAGTCAATGTGAGGTGGA+AGG - chr4.4:2538693-2538712 MS.gene05845:intron 45.0%
AATACGTCGGTGTGGTTATG+CGG - chr4.4:2543325-2543344 MS.gene05845:intron 45.0%
AATAGCATGACCTCTGAGCA+AGG + chr4.4:2544265-2544284 None:intergenic 45.0%
ACACTTAATAGCGACTGGGT+GGG + chr4.4:2540248-2540267 None:intergenic 45.0%
AGGAGCTGCACGAAATAACA+AGG - chr4.4:2543253-2543272 MS.gene05845:intron 45.0%
ATAGGATGAGAAGGTCACAG+AGG - chr4.4:2540945-2540964 MS.gene05845:intron 45.0%
ATTACCATAGTTACGGGACC+AGG + chr4.4:2538953-2538972 None:intergenic 45.0%
CAACTTCTGCAAACGTCTCT+TGG - chr4.4:2543025-2543044 MS.gene05845:intron 45.0%
CAAGCACATGCAGAAAGAAG+GGG + chr4.4:2539576-2539595 None:intergenic 45.0%
CAATTCTGCTTTAGCATCCC+TGG + chr4.4:2541115-2541134 None:intergenic 45.0%
CACAGTTGGAAGAAGAAACC+AGG - chr4.4:2541094-2541113 MS.gene05845:CDS 45.0%
CAGATGTGGTAGATGGCATT+CGG + chr4.4:2544162-2544181 None:intergenic 45.0%
CTCAATTCATGTTCGTGGGA+AGG - chr4.4:2542799-2542818 MS.gene05845:intron 45.0%
CTCCAAAACGGTGGCAATAA+TGG - chr4.4:2544612-2544631 MS.gene05845:CDS 45.0%
CTTAGAAATACCACTGACGG+AGG + chr4.4:2543479-2543498 None:intergenic 45.0%
CTTATTGCACGCTCCTTGAT+GGG - chr4.4:2539273-2539292 MS.gene05845:CDS 45.0%
GACTACAGTACCCAGAGAAT+TGG - chr4.4:2538620-2538639 MS.gene05845:intron 45.0%
GGAAGATCTGAATAGCTTCC+AGG + chr4.4:2540046-2540065 None:intergenic 45.0%
GGAAGCTTACATCTGAGTCA+AGG - chr4.4:2539485-2539504 MS.gene05845:CDS 45.0%
GGAGCAACAAGTGAGAAACT+CGG - chr4.4:2542288-2542307 MS.gene05845:intron 45.0%
GGCAAAGATTACATCTCCGA+GGG + chr4.4:2542957-2542976 None:intergenic 45.0%
GGTCACAGAGGAAGAAAAGA+AGG - chr4.4:2540957-2540976 MS.gene05845:intron 45.0%
GTGGTAAATCCCTCCAAAGA+AGG - chr4.4:2541819-2541838 MS.gene05845:intron 45.0%
GTGGTCTCAATTCATGTTCG+TGG - chr4.4:2542794-2542813 MS.gene05845:intron 45.0%
GTTTCTCCATTCGCCTGAAA+AGG - chr4.4:2543582-2543601 MS.gene05845:intron 45.0%
GTTTCTCCGTTCACCTGAAA+AGG - chr4.4:2543807-2543826 MS.gene05845:CDS 45.0%
TAGCCAGCTTCAACAGTTGA+AGG - chr4.4:2540816-2540835 MS.gene05845:CDS 45.0%
TATTCGCTTATGGCCAAACC+GGG - chr4.4:2542144-2542163 MS.gene05845:CDS 45.0%
TCAATGTGAGGTGGAAGGTA+TGG - chr4.4:2538698-2538717 MS.gene05845:intron 45.0%
TCCCAAGTGTGTGCAAATCA+AGG + chr4.4:2542542-2542561 None:intergenic 45.0%
TGAAGCGAAATGCTCACAGT+TGG - chr4.4:2541080-2541099 MS.gene05845:CDS 45.0%
TGAGGTGCAAGTCATTCACA+TGG + chr4.4:2540359-2540378 None:intergenic 45.0%
TGGAACTAGAGAAGAGAGTG+AGG - chr4.4:2540671-2540690 MS.gene05845:intron 45.0%
TGGACCAGTCTGAGAAAAGA+AGG + chr4.4:2542265-2542284 None:intergenic 45.0%
TGTTGTCCACACCAAATGGT+GGG + chr4.4:2539465-2539484 None:intergenic 45.0%
TTCCTGTTGTCCACACCAAA+TGG + chr4.4:2539469-2539488 None:intergenic 45.0%
TTCGGACTACCCAATTCTCT+GGG + chr4.4:2538633-2538652 None:intergenic 45.0%
! AATAAACCTTGAGTTGCGGC+AGG + chr4.4:2541888-2541907 None:intergenic 45.0%
! ATAAACCTTGAGTTGCGGCA+GGG + chr4.4:2541887-2541906 None:intergenic 45.0%
! GTGGAAGGTATGGTGATCAT+TGG - chr4.4:2538708-2538727 MS.gene05845:intron 45.0%
! TGTGTAAGTTTTTCCGGACC+CGG + chr4.4:2542165-2542184 None:intergenic 45.0%
! TTAAGAGCATGCTTGAGCAG+TGG - chr4.4:2538893-2538912 MS.gene05845:intron 45.0%
!! AAGTCTGGTTCTACCATGCA+TGG - chr4.4:2542827-2542846 MS.gene05845:intron 45.0%
!! AGTATCGACTCGAAGAACTG+AGG - chr4.4:2541157-2541176 MS.gene05845:intron 45.0%
!! AGTTTTAGCCCTTCTATGGC+GGG - chr4.4:2539523-2539542 MS.gene05845:CDS 45.0%
!! CATGGGGACTCTTTTGAGAA+AGG + chr4.4:2542979-2542998 None:intergenic 45.0%
!! GAAAGCGTCGAGAGAAGAAA+CGG - chr4.4:2540287-2540306 MS.gene05845:CDS 45.0%
!! GAGTTTTAGCCCTTCTATGG+CGG - chr4.4:2539522-2539541 MS.gene05845:CDS 45.0%
AAGGCTAGGCGAGTAACTCA+AGG - chr4.4:2543601-2543620 MS.gene05845:intron 50.0%
CACCTAAAGCTCCAAAACGG+TGG - chr4.4:2544603-2544622 MS.gene05845:CDS 50.0%
CAGAGAATTGGGTAGTCCGA+AGG - chr4.4:2538632-2538651 MS.gene05845:intron 50.0%
CCAGAACTGTTCAAGCGGTA+AGG - chr4.4:2544128-2544147 MS.gene05845:intron 50.0%
CCTTACCGCTTGAACAGTTC+TGG + chr4.4:2544131-2544150 None:intergenic 50.0%
CGTGGAACTTATGACCAACC+TGG + chr4.4:2540006-2540025 None:intergenic 50.0%
CTGTTGTCCACACCAAATGG+TGG + chr4.4:2539466-2539485 None:intergenic 50.0%
CTTCGGACTACCCAATTCTC+TGG + chr4.4:2538634-2538653 None:intergenic 50.0%
GAAGAAGAGAGGAACGGAAG+TGG - chr4.4:2539828-2539847 MS.gene05845:intron 50.0%
GACCCCCCAAAGAAATCATC+AGG - chr4.4:2544190-2544209 MS.gene05845:intron 50.0%
GCTTATTGCACGCTCCTTGA+TGG - chr4.4:2539272-2539291 MS.gene05845:CDS 50.0%
GGGATCTATGAAGCCTGTTG+TGG - chr4.4:2539321-2539340 MS.gene05845:CDS 50.0%
GGGCAAAGATTACATCTCCG+AGG + chr4.4:2542958-2542977 None:intergenic 50.0%
GTTGTCCACACCAAATGGTG+GGG + chr4.4:2539464-2539483 None:intergenic 50.0%
TATGAGGCTTCCTCTGCTTG+TGG + chr4.4:2542352-2542371 None:intergenic 50.0%
TCCATTCGCCTGAAAAGGCT+AGG - chr4.4:2543587-2543606 MS.gene05845:intron 50.0%
TCCGTTCACCTGAAAAGGCT+AGG - chr4.4:2543812-2543831 MS.gene05845:CDS 50.0%
TCGAAGATCCATACCCACGA+GGG + chr4.4:2539429-2539448 None:intergenic 50.0%
TGCAGCTCCTAGTTCAACTG+AGG + chr4.4:2543243-2543262 None:intergenic 50.0%
TGTCTGTCATCCTTGCTCAG+AGG - chr4.4:2544252-2544271 MS.gene05845:CDS 50.0%
! AAGTTTTTCCGGACCCGGTT+TGG + chr4.4:2542160-2542179 None:intergenic 50.0%
! CGTGGGAAGGATTTCAAGTC+TGG - chr4.4:2542812-2542831 MS.gene05845:intron 50.0%
! GGTGGCATGCTTGTTGAGAA+AGG - chr4.4:2540437-2540456 MS.gene05845:intron 50.0%
! GGTTGGTCATAAGTTCCACG+AGG - chr4.4:2540006-2540025 MS.gene05845:CDS 50.0%
! TTCTTCCCCACCATTTGGTG+TGG - chr4.4:2539456-2539475 MS.gene05845:CDS 50.0%
!! CACCATTTGGTGTGGACAAC+AGG - chr4.4:2539464-2539483 MS.gene05845:CDS 50.0%
!! GTTACTCGCCTAGCCTTTTC+AGG + chr4.4:2543598-2543617 None:intergenic 50.0%
!! TGGATGGATTGGGATTGCCA+AGG - chr4.4:2539139-2539158 MS.gene05845:intron 50.0%
!! TGGGAGCATTCTGCAACAAC+AGG + chr4.4:2540229-2540248 None:intergenic 50.0%
!!! GCCTAGCCTTTTCAGGTGAA+CGG + chr4.4:2543816-2543835 None:intergenic 50.0%
!!! TGCCACCGTTTTGGAGCTTT+AGG + chr4.4:2544608-2544627 None:intergenic 50.0%
AAATCACTGAGCGCGTCCGT+CGG - chr4.4:2543688-2543707 MS.gene05845:CDS 55.0%
ACGACCTGGTCCCGTAACTA+TGG - chr4.4:2538946-2538965 MS.gene05845:intron 55.0%
ACGGGGAACATGCTAGCATC+TGG + chr4.4:2542600-2542619 None:intergenic 55.0%
CCAATGCATCAAGCCCTCGT+GGG - chr4.4:2539413-2539432 MS.gene05845:CDS 55.0%
CTCGAAGATCCATACCCACG+AGG + chr4.4:2539430-2539449 None:intergenic 55.0%
GAGACAGTGGCAACCCATCA+AGG + chr4.4:2539289-2539308 None:intergenic 55.0%
GCTCTCGGCACAGAAACTGA+TGG - chr4.4:2543907-2543926 MS.gene05845:intron 55.0%
GGGGTCCTTTGCTACAGATG+TGG + chr4.4:2544176-2544195 None:intergenic 55.0%
TCCAATGCATCAAGCCCTCG+TGG - chr4.4:2539412-2539431 MS.gene05845:CDS 55.0%
! GTACTCGAGGCACTTGCATC+TGG - chr4.4:2540651-2540670 MS.gene05845:CDS 55.0%
!! GCCTAGCCTTTTCAGGCGAA+TGG + chr4.4:2543591-2543610 None:intergenic 55.0%
CCCACGAGGGCTTGATGCAT+TGG + chr4.4:2539416-2539435 None:intergenic 60.0%
GCATCAAGCCCTCGTGGGTA+TGG - chr4.4:2539418-2539437 MS.gene05845:CDS 60.0%
GCTTATGGCCAAACCGGGTC+CGG - chr4.4:2542149-2542168 MS.gene05845:CDS 60.0%
TCACCGGACCCGCCATAGAA+GGG + chr4.4:2539534-2539553 None:intergenic 60.0%
TCACTGAACGCCTCCGTCAG+TGG - chr4.4:2543466-2543485 MS.gene05845:intron 60.0%
TTCACCGGACCCGCCATAGA+AGG + chr4.4:2539535-2539554 None:intergenic 60.0%
!! TAGCCCTTCTATGGCGGGTC+CGG - chr4.4:2539528-2539547 MS.gene05845:CDS 60.0%
TTCGGCCCTGCCGCAACTCA+AGG - chr4.4:2541879-2541898 MS.gene05845:intron 65.0%
TCACTGAGCGCGTCCGTCGG+TGG - chr4.4:2543691-2543710 MS.gene05845:CDS 70.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 2538570 2544631 2538570 ID=MS.gene05845
chr4.4 mRNA 2538570 2544631 2538570 ID=MS.gene05845.t1;Parent=MS.gene05845
chr4.4 exon 2544487 2544631 2544487 ID=MS.gene05845.t1.exon1;Parent=MS.gene05845.t1
chr4.4 CDS 2544487 2544631 2544487 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2544234 2544391 2544234 ID=MS.gene05845.t1.exon2;Parent=MS.gene05845.t1
chr4.4 CDS 2544234 2544391 2544234 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2544016 2544126 2544016 ID=MS.gene05845.t1.exon3;Parent=MS.gene05845.t1
chr4.4 CDS 2544016 2544126 2544016 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2543657 2543879 2543657 ID=MS.gene05845.t1.exon4;Parent=MS.gene05845.t1
chr4.4 CDS 2543657 2543879 2543657 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2543093 2543220 2543093 ID=MS.gene05845.t1.exon5;Parent=MS.gene05845.t1
chr4.4 CDS 2543093 2543220 2543093 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2542879 2542962 2542879 ID=MS.gene05845.t1.exon6;Parent=MS.gene05845.t1
chr4.4 CDS 2542879 2542962 2542879 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2542689 2542766 2542689 ID=MS.gene05845.t1.exon7;Parent=MS.gene05845.t1
chr4.4 CDS 2542689 2542766 2542689 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2542509 2542601 2542509 ID=MS.gene05845.t1.exon8;Parent=MS.gene05845.t1
chr4.4 CDS 2542509 2542601 2542509 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2542364 2542393 2542364 ID=MS.gene05845.t1.exon9;Parent=MS.gene05845.t1
chr4.4 CDS 2542364 2542393 2542364 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2541914 2542252 2541914 ID=MS.gene05845.t1.exon10;Parent=MS.gene05845.t1
chr4.4 CDS 2541914 2542252 2541914 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2541749 2541830 2541749 ID=MS.gene05845.t1.exon11;Parent=MS.gene05845.t1
chr4.4 CDS 2541749 2541830 2541749 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2541559 2541654 2541559 ID=MS.gene05845.t1.exon12;Parent=MS.gene05845.t1
chr4.4 CDS 2541559 2541654 2541559 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2541301 2541477 2541301 ID=MS.gene05845.t1.exon13;Parent=MS.gene05845.t1
chr4.4 CDS 2541301 2541477 2541301 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2541014 2541120 2541014 ID=MS.gene05845.t1.exon14;Parent=MS.gene05845.t1
chr4.4 CDS 2541014 2541120 2541014 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2540774 2540925 2540774 ID=MS.gene05845.t1.exon15;Parent=MS.gene05845.t1
chr4.4 CDS 2540774 2540925 2540774 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2540483 2540680 2540483 ID=MS.gene05845.t1.exon16;Parent=MS.gene05845.t1
chr4.4 CDS 2540483 2540680 2540483 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2540155 2540408 2540155 ID=MS.gene05845.t1.exon17;Parent=MS.gene05845.t1
chr4.4 CDS 2540155 2540408 2540155 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2539903 2540057 2539903 ID=MS.gene05845.t1.exon18;Parent=MS.gene05845.t1
chr4.4 CDS 2539903 2540057 2539903 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2539215 2539792 2539215 ID=MS.gene05845.t1.exon19;Parent=MS.gene05845.t1
chr4.4 CDS 2539215 2539792 2539215 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2538990 2539087 2538990 ID=MS.gene05845.t1.exon20;Parent=MS.gene05845.t1
chr4.4 CDS 2538990 2539087 2538990 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
chr4.4 exon 2538570 2538625 2538570 ID=MS.gene05845.t1.exon21;Parent=MS.gene05845.t1
chr4.4 CDS 2538570 2538625 2538570 ID=cds.MS.gene05845.t1;Parent=MS.gene05845.t1
Gene Sequence

>MS.gene05845

GTTGCTTGTCCCACTAGGAACCTAGTAATGAATTCCCCATCTGGCATAAAGACTACAGTACCCAGAGAATTGGGTAGTCCGAAGGACATTTTCAATGGAATTGATAGAATTGGGAATGTAGTAAACAGTCAATGTGAGGTGGAAGGTATGGTGATCATTGGACTTAAACTCTCTTTGTAATTTGCATATTATTCATTTATGCGTTGAATTTGAATTACTCTTCTTTATGAATATTTTCAGCTAAACATCGATCAGTTTTGGTCCAATGGTTAAATAGTCTTCTTCCTTCATTGGACTTCTCAACAAATGTCACAGATGGTGAGTTAAGAGCATGCTTGAGCAGTGGTACAGTTTTGTGCCAGATACTAAACAAACTACGACCTGGTCCCGTAACTATGGTAATACTTTCTTAACTTTCAGAGTTTCAATTTACTTCAACAATACATTGGACAATTTTGCTTTCAGAATTCAGGTATACCTTTCAATCTGGATTTTTTTGTTGTAGGTCAGTGAATCTGATCATTCTCTGCCATCACAATCAGAAAATGTTAAAACGTTTCTGAAAGCTTTGGATGGATTGGGATTGCCAAGGTTTGAAATATCAGACCTAGAGAAGGTATAAGATACCTAGCACCTATTTTTTTTGTACCGTGATTTTATGCATAGATTATTGTATCTGTTGATAATTTAAGATCTTCACGAGCTTATTGCACGCTCCTTGATGGGTTGCCACTGTCTCTTTTGTTGTTTAGGGATCTATGAAGCCTGTTGTGGATTGTCTTTTAATACTCAGAGCGAAAAGTTTGATGAATTCTTTGGGAGATAATGCTTCTTTAAGTAATTCCAATGCATCAAGCCCTCGTGGGTATGGATCTTCGAGTTTTCATTCTTCCCCACCATTTGGTGTGGACAACAGGAAGCTTACATCTGAGTCAAGGTTTCAACGTGTTATGAGTTTTAGCCCTTCTATGGCGGGTCCGGTGAATTTTATTAAACTCATCATCCCCTTCTTTCTGCATGTGCTTGTTGTACATAAGGAGATAATAAAATCCAATTTCATAAACACGGTGACATGTTAATGAGAAAACTTATCTAGGATGTATGTAATTTGAATTCCCTAAGCAATGTTATCTGGGAAGTCCTAACTTGTACTATAAAAACGAAACATTTAATTTTGTAAGACACACTTTTTCTTTGAACTTTAAATTCTTAATTATATATGTGTGTGACTATCTTTTTTCATTTAAATCCTTCTTTAGAAGAAGAGAGGAACGGAAGTGGTTATTTTCCCTTTGTGAAGGACATTTGTAGTGCTTGAAAGTTAAACATCTATGTTGATATTCATTAGACCGATTATATTGCGTTCTTGTATTTATAAGTGATTGGTTCTATTCATTTGAATCTTGTGCAGAACCATCAGCTTCATTAATATACCAGGTTGGTCATAAGTTCCACGAGGTTTTTCAAATTAAACCTGGAAGCTATTCAGATCTTCCTGCCGCAAAAATATCAGAAATGATGAAATCAAACAGTTTAGATGTAAGTTCCTGAAGTCAACCTTTAGATACATGTATTCAGATTAAAAAAATTGTGTGTACATGTGTATATAGATATGCGTGTATTCTTTGTTTGATTCATGACTGATTTATTTTATTGCCTGTTGTTGCAGAATGCTCCCACCCAGTCGCTATTAAGTGTTGTCAATGGTATTCTTGAAGAAAGCGTCGAGAGAAGAAACGGAGAAATACCTCATGTATGGCTTGCAAATGAAAATACAAGTATATATCCATGTGAATGACTTGCACCTCAAGCTCAAGTAATCCATACAGTTTCATAAATATTGTTTGTTATTTTTGTTTGTTTAGCGGGTGGCATGCTTGTTGAGAAAGGTTTCACAGGAGATCGAACGCCGCATATCAACACAAGCAGAACACATACGAACTGTATGTCCGTTACATCGTTCTTAACATCTATGTAATTTTGCTCTTCTCACTCAGTTTCCTCATGTCACTTTCTTACACTGTATTCAGCAAAGTAATCTTTTTAAGGCTCGGGAAGAAAAATATCAGTCAAGAATAAGAGTACTCGAGGCACTTGCATCTGGAACTAGAGAAGAGAGTGAGGTATCTCAAAATATCATTGTCTAGTCATATTTTTAAAAGTGGATCCTTATATATTCCTTCAAATTTTGAAAATTGGTACAAGTTCTATACTTATCAGAGCGAACTTTTGCAACAGATGATTTCTAGCCAGCTTCAACAGTTGAAGGTAATGATTTCATACTTTGCATCATAAGTAATAATATTGATATACTATAGACACGGGATAATACAAGAGGCTTTAATTAGACTATTTTCATGTTCCGACTCTTCAATATAGGATGAGAAGGTCACAGAGGAAGAAAAGAAGGAAAACGAAAAAGAAATAATTAGGTTGACGAAAATGCTAGAGGACAAAAATTTGGAAATTTCAGAATTGAAGCAAAAACTGGAAGCAACCAAAAAAACATATGAAGCGAAATGCTCACAGTTGGAAGAAGAAACCAGGGATGCTAAAGCAGAATTGAGACAGAAATCTCAAGAATATGAGTATCGACTCGAAGAACTGAGGAATGCAGTTAAGGAGATTGAGGATTCTTCGGATTCAAAATATCAGGAGTGGAGCGTGAAAGAGAACCAATTGCAGACTGTTATAAATTGTCAATTTAGTTCCCTACAGGTACACTTAAAAATGTGTCAATGTCAATGTTATAATTGTGGTGCCAAACATTACAATTTTGTGCTTGATTTGCAAACATCCAGAAACTGAAATCATTGTGGGAGTCCATTAAGCAAGATGCTATGAAAGGGAAAACCGTTTATGTAGAGGAGTGTAATCGATTACGTAAGCCTTTGTTGTTAGAATGTCATTTTAGTGCTCCCTTTCATATTCTTCTACTGGGATTTAACCTTTAATCATTTGAATGTAATTTGTTCAGGTGTAAATCTCAAACCACTCATACATGCATCTCAGAACTATCAAGCCGTCCTTGCTGAAAATAAAAAAATGTTTAATGAAGTTCAAGAATTAAAAGGTATCATTATCCATGTCTTTTTTCTCCCTTTTGTATATTATGTAAGTGTAATATGAATTCACACATTGTTTTATGATACAGGAAATATCAGAGTATTTTGTCGAATTAGACCATTCCTTATAGACAAAAAGGAAAAACAGTCTATTGTAGAAGACATAGGTGAAAGTGATTTGGTTGTGGTAAATCCCTCCAAAGAAGGGAAAGATGTACATCGATCATTTAAATTCAACAAGATTTTCGGCCCTGCCGCAACTCAAGGTTTATTTATATATTCTATTCCATTTTTGAGATTAGGCTATGGAGAAGTATTCCTTATATCCAGAGATGAAAATTTTGCATCATTATTCCTGTGTATCGATATTACAGTTTTTCCTTAGTTTTAGTTGTAATGTTTATATTCTGACGTTGTGCCATGATTCTACTCTGAATGATGCACAGGAGATGTATACGCTGACATTCAACCTTTTGTAAGATCGGTACTCGATGGATATAATGTATGTATATTCGCTTATGGCCAAACCGGGTCCGGAAAAACTTACACAATGGTATAAACCCTCTTGACATATTGATTTTATATTTTTCTTAATGCTATTAAAGAAATGCCTTATTGTACAAATCACCTTCTTTTCTCAGACTGGTCCAAATGGAGCAACAAGTGAGAAACTCGGTGTTAATTATCGAGCTCTAAATGACCTCTTCAGAATTTCCACAAGCAGAGGAAGCCTCATAGACTATGAGATTTGGGTTCAAATGGTTGAGATATATAACGAGCAAGTTCGTGACTTGTTATCAACTGAGGAATCTCCAAAAAGATATCCTTTTTTAAAAATATCTTTAGACAATTTTTTCTTTTTTTTGCATTAACTTTCCCTTATTAGCTTTTTCTTCTCTGGTTTCCTTGATTTGCACACACTTGGGATTTTGACTCAATCTCAATCATACGGTATAGCAGTACCAGATGCTAGCATGTTCCCCGTAAAATCACCTTCAGATGTCATTAAGTTGATGGACATTGGACTTAAAAATAGAGCAATCGGTTCAACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGGTTAAATCTTTTTTTTCTTTCCTTGAAATGAAAGCTTTTTATTATGATGACATGTATAAACATTACGTGCACAGTGTGGTCTCAATTCATGTTCGTGGGAAGGATTTCAAGTCTGGTTCTACCATGCATGGTAATCTTCATTTGGTAGATTTGGCTGGAAGTGAAAGAGTAGATCGATCTGATGTAACTGGGGATAGACTTAAGGAAGCACAACATATAAACAAATCGCTTTCTGCCCTCGGAGATGTAATCTTTGCCCTTTCTCAAAAGAGTCCCCATGTACCATATAGAAACAGCAAGCTTACTCAACTTCTGCAAACGTCTCTTGGTAAATCAATGTTCATCTGCTTAACTTTCGGTTTAGAATCTCTTTCAAGCTTCTACTATATTTTGATTTGAATATTGTCTTTGATTTTACTGCACAGGCGGTCAAGCAAAGACTCTCATGTTTGTCCAGATTAACTCAGACGTCAGTTCGTATTCTGAAACTTTGAGTACTTTAAAGTTTGCTGAGAGAGTTTCCTCAGTTGAACTAGGAGCTGCACGAAATAACAAGGAGACGAGAGAATTATTGGAACAGGTAATTTACCTTGTTCATGTAAATTGAATACGTCGGTGTGGTTATGCGGCGTACTTTCCTTTTGTTTCATGTACTCTGACAATTATTTTCTGCCTTGTCTTACTTTCAAGGTGACTTCTATGAAGAACACTATTTTGAAAAAAGATGAGGAGATTGAGAGGCTTAAATCACTGAACGCCTCCGTCAGTGGTATTTCTAAGAAAATTCAAAAAGTATCAAGTGGAAGTTTTAAGCACCTTGTTGAAGGTGATATCAAACAACGAATGGATGACCATAAAACTGAGTTTCTCCATTCGCCTGAAAAGGCTAGGCGAGTAACTCAAGGAGTCTCAGCTACAGATTTTCAACAAAGATCAAGTGATTTTTCTGACAACAAGGAGTCTCGGCTTAAATCACTGAGCGCGTCCGTCGGTGGTATTTCTAAGAGAATTCAAAAAGTATCAAGTGGAAGTTTTAAGCACCTTGTTGAAGGTGATATCAAACAACGAATGGATGACCATAAAACTGAGTTTCTCCGTTCACCTGAAAAGGCTAGGCGAGTAACTCAAGGAGTCTCAGCTACAGATTTTCAACAAAGATCAAGTGATTTTTCTGACAACAATAGTCTTGCTCTCGGCACAGAAACTGATGGTTCTTCTGATAGTTCCAGTATGAGTGAAGCCAAAAAGACTTCAGATAAGTCGAAGAAGTGAGTAGTGCTTATGCTAACTAACAGCATATTTTCAGAGGAACAACATATGCATCGCTTAGAATTCAAGTTTAAAATTAATGTATATGTGATATTTATTGTTAAAATTTTGATCTGTGTTTTGCAGGTCTAAAGTATTATCCAGAACTGTTCAAGCGGTAAGGAAATTTGGCCGAATGCCATCTACCACATCTGTAGCAAAGGACCCCCCAAAGAAATCATCAGGTATATGCAAGTTAAAATGAAATTGTCTCGATTTATGCTGTGTCTGTCATCCTTGCTCAGAGGTCATGCTATTCTTCACTTTGCTTTTAGTAAAGCATATGAATATTATACTAACAATGAATTTAACTCCTCTAAAGGACTTTTAGGAGATAAAAGTAAAATATATCGATAGTTAATGAATCATCGGTTAGTATTTAATTTGCATACATAACAAATTATAAATAGACTCAAATATCAATTGATGGTTCTCATCAATGATTCAAATATCTTAAAGTGATAATTTACTATATAGGTGTCAAACTAAGTAATCGTGAACTTCTTAAAATGTTTAAATTTTTCAACTTTCTTCACAATTTAATTTCAGGTACCATAAAAAGCCCTAGTATTGGAACACCTAAAGCTCCAAAACGGTGGCAATAA
Protein sequence

>MS.gene05845.t1

VACPTRNLVMNSPSGIKTTVPRELGSPKDIFNGIDRIGNVVNSQCEVEAKHRSVLVQWLNSLLPSLDFSTNVTDGELRACLSSGTVLCQILNKLRPGPVTMVSESDHSLPSQSENVKTFLKALDGLGLPRFEISDLEKGSMKPVVDCLLILRAKSLMNSLGDNASLSNSNASSPRGYGSSSFHSSPPFGVDNRKLTSESRFQRVMSFSPSMAEPSASLIYQVGHKFHEVFQIKPGSYSDLPAAKISEMMKSNSLDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVSQEIERRISTQAEHIRTQSNLFKAREEKYQSRIRVLEALASGTREESEMISSQLQQLKDEKVTEEEKKENEKEIIRLTKMLEDKNLEISELKQKLEATKKTYEAKCSQLEEETRDAKAELRQKSQEYEYRLEELRNAVKEIEDSSDSKYQEWSVKENQLQTVINCQFSSLQKLKSLWESIKQDAMKGKTVYVEECNRLRVNLKPLIHASQNYQAVLAENKKMFNEVQELKGNIRVFCRIRPFLIDKKEKQSIVEDIGESDLVVVNPSKEGKDVHRSFKFNKIFGPAATQGDVYADIQPFVRSVLDGYNVCIFAYGQTGSGKTYTMTGPNGATSEKLGVNYRALNDLFRISTSRGSLIDYEIWVQMVEIYNEQVRDFFFFSGFLDLHTLGILTQSQSYGIAVPDASMFPVKSPSDVIKLMDIGLKNRAIGSTAMNERSSRSHSVVSIHVRGKDFKSGSTMHGNLHLVDLAGSERVDRSDVTGDRLKEAQHINKSLSALGDVIFALSQKSPHVPYRNSKLTQLLQTSLGGQAKTLMFVQINSDVSSYSETLSTLKFAERVSSVELGAARNNKETRELLEQVTSMKNTILKKDEEIERLKSLNASVSGISKKIQKVSSGSFKHLVEGDIKQRMDDHKTEFLHSPEKARRVTQGVSATDFQQRSSDFSDNKESRLKSLSASVGGISKRIQKVSSGSFKHLVEGDIKQRMDDHKTEFLRSPEKARRVTQGVSATDFQQRSSDFSDNNSLALGTETDGSSDSSSMSEAKKTSDKSKKSKVLSRTVQAVRKFGRMPSTTSVAKDPPKKSSGTIKSPSIGTPKAPKRWQ