Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058706.t1 | XP_024626250.1 | 98.8 | 347 | 4 | 0 | 1 | 347 | 1 | 347 | 1.20E-198 | 702.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058706.t1 | Q9FFD2 | 71.8 | 347 | 98 | 0 | 1 | 347 | 1 | 347 | 8.5e-153 | 541.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058706.t1 | Q2HV87 | 98.8 | 347 | 4 | 0 | 1 | 347 | 1 | 347 | 8.6e-199 | 702.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058706 | MS.gene058707 | 0.805083 | 1.58E-49 | -1.69E-46 |
| MS.gene058706 | MS.gene51185 | 0.864581 | 1.10E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058706.t1 | MTR_7g079490 | 98.847 | 347 | 4 | 0 | 1 | 347 | 1 | 347 | 0.0 | 707 |
| MS.gene058706.t1 | MTR_2g461970 | 51.453 | 344 | 161 | 3 | 2 | 344 | 5 | 343 | 1.34e-131 | 380 |
| MS.gene058706.t1 | MTR_5g046030 | 48.529 | 340 | 169 | 3 | 9 | 347 | 13 | 347 | 1.61e-126 | 367 |
| MS.gene058706.t1 | MTR_6g015905 | 49.412 | 340 | 166 | 3 | 9 | 347 | 10 | 344 | 2.59e-126 | 366 |
| MS.gene058706.t1 | MTR_7g015970 | 49.112 | 338 | 166 | 3 | 9 | 345 | 10 | 342 | 6.40e-125 | 363 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058706.t1 | AT5G16510 | 71.758 | 347 | 98 | 0 | 1 | 347 | 1 | 347 | 0.0 | 542 |
| MS.gene058706.t1 | AT5G16510 | 71.758 | 347 | 98 | 0 | 1 | 347 | 1 | 347 | 0.0 | 542 |
| MS.gene058706.t1 | AT3G02230 | 48.844 | 346 | 171 | 3 | 1 | 345 | 12 | 352 | 6.55e-126 | 365 |
| MS.gene058706.t1 | AT5G15650 | 48.817 | 338 | 167 | 3 | 9 | 345 | 20 | 352 | 9.93e-125 | 362 |
| MS.gene058706.t1 | AT3G08900 | 49.118 | 340 | 167 | 3 | 9 | 347 | 16 | 350 | 1.41e-123 | 360 |
| MS.gene058706.t1 | AT5G50750 | 48.817 | 338 | 167 | 3 | 9 | 345 | 16 | 348 | 3.09e-123 | 359 |
Find 108 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTAAATCCTTCGGGAATT+TGG | 0.098316 | 7.4:-26414886 | None:intergenic |
| GGTTACGCTTGTAGATATTT+TGG | 0.181272 | 7.4:+26414974 | MS.gene058706:CDS |
| ACCCCACTTCGGAGGCTAAA+TGG | 0.182922 | 7.4:-26415187 | None:intergenic |
| GCCAACTAATTCTCGGTTAA+AGG | 0.225160 | 7.4:-26415365 | None:intergenic |
| GACTTCCATTCATTCATAAA+AGG | 0.270719 | 7.4:-26414806 | None:intergenic |
| CCCAGCATTGGTCCCAGCTT+TGG | 0.273271 | 7.4:+26415387 | MS.gene058706:CDS |
| TTCTTTCTTCAAGCTGTCTA+TGG | 0.288528 | 7.4:-26415551 | None:intergenic |
| AAGTTGTTCCTTCACTGATT+TGG | 0.332158 | 7.4:-26415674 | None:intergenic |
| CAGGATCTTTGACTATTATC+AGG | 0.362076 | 7.4:-26414847 | None:intergenic |
| ACCAAAGCTGGGACCAATGC+TGG | 0.375478 | 7.4:-26415388 | None:intergenic |
| TCCACTTCTATTCGCTTCTC+TGG | 0.381049 | 7.4:+26414953 | MS.gene058706:CDS |
| GACTATTATCAGGTGGAAAC+GGG | 0.402580 | 7.4:-26414837 | None:intergenic |
| ATGGGAAGGGGTGAAATTGA+TGG | 0.404928 | 7.4:+26415573 | MS.gene058706:CDS |
| CCCCACTTCGGAGGCTAAAT+GGG | 0.405485 | 7.4:-26415186 | None:intergenic |
| GTCCCAGCTTTGGTGTTGGC+AGG | 0.407640 | 7.4:+26415397 | MS.gene058706:CDS |
| ATCTCGACCACGCAGTCCTC+TGG | 0.407680 | 7.4:-26415649 | None:intergenic |
| GACATCTGCACTAAATCCTT+CGG | 0.408413 | 7.4:-26414894 | None:intergenic |
| TCTCCTGCCAACACCAAAGC+TGG | 0.408713 | 7.4:-26415400 | None:intergenic |
| GTGTGGACTGTGGCTCAATC+TGG | 0.418802 | 7.4:+26415225 | MS.gene058706:CDS |
| ACATCTGCACTAAATCCTTC+GGG | 0.431937 | 7.4:-26414893 | None:intergenic |
| TGACTATTATCAGGTGGAAA+CGG | 0.435701 | 7.4:-26414838 | None:intergenic |
| AAAGTGGGTTGCCGTATGTT+TGG | 0.450892 | 7.4:+26415509 | MS.gene058706:CDS |
| ACCCATTTAGCCTCCGAAGT+GGG | 0.451793 | 7.4:+26415185 | MS.gene058706:CDS |
| GCCTTTAACCGAGAATTAGT+TGG | 0.454901 | 7.4:+26415364 | MS.gene058706:CDS |
| GGGAAACTGTGGAAGATATA+TGG | 0.454942 | 7.4:+26415437 | MS.gene058706:CDS |
| TAGACAGCTTGAAGAAAGAA+TGG | 0.467447 | 7.4:+26415554 | MS.gene058706:CDS |
| CGCTGATGCCATGGCAGAGT+GGG | 0.477662 | 7.4:+26415726 | MS.gene058706:CDS |
| AATTTGGAGTTCTTCCTTGA+GGG | 0.480278 | 7.4:-26414870 | None:intergenic |
| TATCTTGAATTCCTCTGTGT+TGG | 0.484553 | 7.4:-26415280 | None:intergenic |
| GAACAAAATCTGCACCCTTA+CGG | 0.484567 | 7.4:-26415156 | None:intergenic |
| ATGCTGGGCCAACTAATTCT+CGG | 0.493427 | 7.4:-26415372 | None:intergenic |
| TTAAAGAAGAAAGGTGTGGC+AGG | 0.494908 | 7.4:-26415115 | None:intergenic |
| CTTTCATTTCTCCAAACATA+CGG | 0.497867 | 7.4:-26415520 | None:intergenic |
| GAGCCTGTGTTGGCGCATCT+AGG | 0.503951 | 7.4:-26415252 | None:intergenic |
| AACTTTACAGACTGAAAGAA+AGG | 0.511586 | 7.4:-26415607 | None:intergenic |
| TATAGTGTATTAAAGAAGAA+AGG | 0.512361 | 7.4:-26415124 | None:intergenic |
| TGGCAGAGTGGGTTAAGCTC+TGG | 0.517333 | 7.4:+26415737 | MS.gene058706:CDS |
| TGGAGTTCTTCCTTGAGGGC+AGG | 0.518206 | 7.4:-26414866 | None:intergenic |
| TTCGAAAGCCGCTGATGCCA+TGG | 0.519664 | 7.4:+26415717 | MS.gene058706:CDS |
| AGAATTAGTTGGCCCAGCAT+TGG | 0.520079 | 7.4:+26415375 | MS.gene058706:CDS |
| ATTGGTCCCAGCTTTGGTGT+TGG | 0.521152 | 7.4:+26415393 | MS.gene058706:CDS |
| GCTTTGGTGTTGGCAGGAGA+AGG | 0.521241 | 7.4:+26415403 | MS.gene058706:CDS |
| AAATCAGTGAAGGAACAACT+TGG | 0.521373 | 7.4:+26415676 | MS.gene058706:CDS |
| CTAAGCCTCGGTGTGAAAAG+TGG | 0.526128 | 7.4:+26415493 | MS.gene058706:CDS |
| AGACAGCTTGAAGAAAGAAT+GGG | 0.532129 | 7.4:+26415555 | MS.gene058706:CDS |
| CCAAAGCTGGGACCAATGCT+GGG | 0.532879 | 7.4:-26415387 | None:intergenic |
| CTCTGAAATTGAGCGAGTGG+TGG | 0.538006 | 7.4:+26414925 | MS.gene058706:CDS |
| AGTCAAAGATCCTGCCCTCA+AGG | 0.538904 | 7.4:+26414856 | MS.gene058706:CDS |
| ACTATATGATCCATTCCGTA+AGG | 0.553697 | 7.4:+26415141 | MS.gene058706:CDS |
| CAGGAGAAGGAAAGCTCAGG+TGG | 0.555962 | 7.4:+26415416 | MS.gene058706:CDS |
| CTCCTGCCAACACCAAAGCT+GGG | 0.557867 | 7.4:-26415399 | None:intergenic |
| GATTCCACTCACTGGCAACA+TGG | 0.560139 | 7.4:-26415335 | None:intergenic |
| CCCATTTAGCCTCCGAAGTG+GGG | 0.561643 | 7.4:+26415186 | MS.gene058706:CDS |
| ACCAGAGAAGCGAATAGAAG+TGG | 0.561782 | 7.4:-26414954 | None:intergenic |
| GTTGGCTTGAGAGCCTGTGT+TGG | 0.565124 | 7.4:-26415262 | None:intergenic |
| AGAGGACTGCGTGGTCGAGA+TGG | 0.569270 | 7.4:+26415651 | MS.gene058706:CDS |
| AAATCTGCACCCTTACGGAA+TGG | 0.569993 | 7.4:-26415151 | None:intergenic |
| TCTGGCGTCGTAGCTGATTG+TGG | 0.570688 | 7.4:-26415631 | None:intergenic |
| GAATTTGGAGTTCTTCCTTG+AGG | 0.571672 | 7.4:-26414871 | None:intergenic |
| TCTGAAATTGAGCGAGTGGT+GGG | 0.574447 | 7.4:+26414926 | MS.gene058706:CDS |
| GTTGATTGTGCTCTGTCGTG+TGG | 0.577748 | 7.4:+26415208 | MS.gene058706:CDS |
| AGACCTAGATGCGCCAACAC+AGG | 0.578067 | 7.4:+26415249 | MS.gene058706:CDS |
| GTTAAGCTCTGGAAGTCAGT+TGG | 0.579934 | 7.4:+26415748 | MS.gene058706:CDS |
| AACGAAGTTGACATTGTGAT+CGG | 0.584032 | 7.4:+26414761 | MS.gene058706:CDS |
| GCAATGTTGATTCCACTCAC+TGG | 0.584544 | 7.4:-26415343 | None:intergenic |
| TGGCAGGAGAAGGAAAGCTC+AGG | 0.584833 | 7.4:+26415413 | MS.gene058706:CDS |
| AGAGCCATGTTGCCAGTGAG+TGG | 0.586101 | 7.4:+26415331 | MS.gene058706:CDS |
| AAAGAAGAAAGGTGTGGCAG+GGG | 0.586422 | 7.4:-26415113 | None:intergenic |
| GCTTGAAGAAAGAATGGGAA+GGG | 0.593851 | 7.4:+26415560 | MS.gene058706:CDS |
| GAGCTTAACCCACTCTGCCA+TGG | 0.594397 | 7.4:-26415734 | None:intergenic |
| TAAGCCTCGGTGTGAAAAGT+GGG | 0.598697 | 7.4:+26415494 | MS.gene058706:CDS |
| CTATATGATCCATTCCGTAA+GGG | 0.604465 | 7.4:+26415142 | MS.gene058706:CDS |
| CCACTCTGCCATGGCATCAG+CGG | 0.607023 | 7.4:-26415725 | None:intergenic |
| GTGCTCTGTCGTGTGGACTG+TGG | 0.608262 | 7.4:+26415215 | MS.gene058706:CDS |
| TATGTTTGGAGAAATGAAAG+AGG | 0.608956 | 7.4:+26415523 | MS.gene058706:CDS |
| TGTATTAAAGAAGAAAGGTG+TGG | 0.611182 | 7.4:-26415119 | None:intergenic |
| AAGGTGTGGCAGGGGTCTTG+AGG | 0.612175 | 7.4:-26415105 | None:intergenic |
| AAAGCTCAGGTGGGAAACTG+TGG | 0.612768 | 7.4:+26415426 | MS.gene058706:CDS |
| CGAGATGGCCAAATCAGTGA+AGG | 0.615435 | 7.4:+26415666 | MS.gene058706:CDS |
| GATCTTTGACTATTATCAGG+TGG | 0.616826 | 7.4:-26414844 | None:intergenic |
| GTATGCGACCACCTAAGCCT+CGG | 0.617533 | 7.4:+26415481 | MS.gene058706:CDS |
| TAAAGAAGAAAGGTGTGGCA+GGG | 0.617653 | 7.4:-26415114 | None:intergenic |
| CCGCTGATGCCATGGCAGAG+TGG | 0.618375 | 7.4:+26415725 | MS.gene058706:CDS |
| AGTGAAGGAACAACTTGGGA+AGG | 0.619719 | 7.4:+26415681 | MS.gene058706:CDS |
| TACCCATTTAGCCTCCGAAG+TGG | 0.620536 | 7.4:+26415184 | MS.gene058706:CDS |
| AGAGAAGCGAATAGAAGTGG+AGG | 0.622245 | 7.4:-26414951 | None:intergenic |
| CAACATGGCTCTCGTAGGAA+CGG | 0.623643 | 7.4:-26415320 | None:intergenic |
| AATCAGTGAAGGAACAACTT+GGG | 0.624801 | 7.4:+26415677 | MS.gene058706:CDS |
| ATTCATTCATAAAAGGAGTG+AGG | 0.628201 | 7.4:-26414799 | None:intergenic |
| GGAAGGGGTGAAATTGATGG+AGG | 0.629194 | 7.4:+26415576 | MS.gene058706:CDS |
| AAACTCTGAAATTGAGCGAG+TGG | 0.630141 | 7.4:+26414922 | MS.gene058706:CDS |
| GAGCACAATCAACCCCACTT+CGG | 0.641756 | 7.4:-26415198 | None:intergenic |
| CACAATCAACCCCACTTCGG+AGG | 0.642239 | 7.4:-26415195 | None:intergenic |
| CTTGAAGAAAGAATGGGAAG+GGG | 0.643591 | 7.4:+26415561 | MS.gene058706:CDS |
| ACTGGCAACATGGCTCTCGT+AGG | 0.644873 | 7.4:-26415325 | None:intergenic |
| GTTCCAGCAAAAGATGACGC+GGG | 0.649072 | 7.4:+26415046 | MS.gene058706:CDS |
| AGCTTGAAGAAAGAATGGGA+AGG | 0.654031 | 7.4:+26415559 | MS.gene058706:CDS |
| TCAGCGGCTTTCGAAAACAT+AGG | 0.655253 | 7.4:-26415709 | None:intergenic |
| GGGGAATGTAGTAGATGCTG+TGG | 0.657954 | 7.4:+26415066 | MS.gene058706:CDS |
| TTCCAGCAAAAGATGACGCG+GGG | 0.659790 | 7.4:+26415047 | MS.gene058706:CDS |
| TGTTCCAGCAAAAGATGACG+CGG | 0.661904 | 7.4:+26415045 | MS.gene058706:CDS |
| GAAGAACTCCAAATTCCCGA+AGG | 0.676927 | 7.4:+26414878 | MS.gene058706:CDS |
| AGGAGAAGGAAAGCTCAGGT+GGG | 0.684548 | 7.4:+26415417 | MS.gene058706:CDS |
| ACAATCAGCTACGACGCCAG+AGG | 0.686961 | 7.4:+26415633 | MS.gene058706:CDS |
| ACTGTGGAAGATATATGGTG+TGG | 0.687243 | 7.4:+26415442 | MS.gene058706:CDS |
| ACAGAGGAATTCAAGATACG+TGG | 0.688219 | 7.4:+26415285 | MS.gene058706:CDS |
| TACGACGCCAGAGGACTGCG+TGG | 0.738114 | 7.4:+26415642 | MS.gene058706:CDS |
| AGGCTCTCAAGCCAACACAG+AGG | 0.778427 | 7.4:+26415269 | MS.gene058706:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAGTGTATTAAAGAAGAA+AGG | - | chr7.4:26415127-26415146 | None:intergenic | 20.0% |
| AACTTTACAGACTGAAAGAA+AGG | - | chr7.4:26415610-26415629 | None:intergenic | 30.0% | |
| ATTCATTCATAAAAGGAGTG+AGG | - | chr7.4:26414802-26414821 | None:intergenic | 30.0% | |
| CTTTCATTTCTCCAAACATA+CGG | - | chr7.4:26415523-26415542 | None:intergenic | 30.0% | |
| GACTTCCATTCATTCATAAA+AGG | - | chr7.4:26414809-26414828 | None:intergenic | 30.0% | |
| TATGTTTGGAGAAATGAAAG+AGG | + | chr7.4:26415523-26415542 | MS.gene058706:CDS | 30.0% | |
| TGTATTAAAGAAGAAAGGTG+TGG | - | chr7.4:26415122-26415141 | None:intergenic | 30.0% | |
| ! | TCACTCCTTTTATGAATGAA+TGG | + | chr7.4:26414801-26414820 | MS.gene058706:CDS | 30.0% |
| AAATCAGTGAAGGAACAACT+TGG | + | chr7.4:26415676-26415695 | MS.gene058706:CDS | 35.0% | |
| AACGAAGTTGACATTGTGAT+CGG | + | chr7.4:26414761-26414780 | MS.gene058706:CDS | 35.0% | |
| AATCAGTGAAGGAACAACTT+GGG | + | chr7.4:26415677-26415696 | MS.gene058706:CDS | 35.0% | |
| ACTATATGATCCATTCCGTA+AGG | + | chr7.4:26415141-26415160 | MS.gene058706:CDS | 35.0% | |
| AGACAGCTTGAAGAAAGAAT+GGG | + | chr7.4:26415555-26415574 | MS.gene058706:CDS | 35.0% | |
| CAGGATCTTTGACTATTATC+AGG | - | chr7.4:26414850-26414869 | None:intergenic | 35.0% | |
| CTATATGATCCATTCCGTAA+GGG | + | chr7.4:26415142-26415161 | MS.gene058706:CDS | 35.0% | |
| GATCTTTGACTATTATCAGG+TGG | - | chr7.4:26414847-26414866 | None:intergenic | 35.0% | |
| TAGACAGCTTGAAGAAAGAA+TGG | + | chr7.4:26415554-26415573 | MS.gene058706:CDS | 35.0% | |
| TATCTTGAATTCCTCTGTGT+TGG | - | chr7.4:26415283-26415302 | None:intergenic | 35.0% | |
| TGACTATTATCAGGTGGAAA+CGG | - | chr7.4:26414841-26414860 | None:intergenic | 35.0% | |
| TTCTTTCTTCAAGCTGTCTA+TGG | - | chr7.4:26415554-26415573 | None:intergenic | 35.0% | |
| ! | AAGTTGTTCCTTCACTGATT+TGG | - | chr7.4:26415677-26415696 | None:intergenic | 35.0% |
| ! | AATTTGGAGTTCTTCCTTGA+GGG | - | chr7.4:26414873-26414892 | None:intergenic | 35.0% |
| ! | GGTTACGCTTGTAGATATTT+TGG | + | chr7.4:26414974-26414993 | MS.gene058706:CDS | 35.0% |
| ACAGAGGAATTCAAGATACG+TGG | + | chr7.4:26415285-26415304 | MS.gene058706:CDS | 40.0% | |
| ACATCTGCACTAAATCCTTC+GGG | - | chr7.4:26414896-26414915 | None:intergenic | 40.0% | |
| ACTGTGGAAGATATATGGTG+TGG | + | chr7.4:26415442-26415461 | MS.gene058706:CDS | 40.0% | |
| AGCTTGAAGAAAGAATGGGA+AGG | + | chr7.4:26415559-26415578 | MS.gene058706:CDS | 40.0% | |
| CACTAAATCCTTCGGGAATT+TGG | - | chr7.4:26414889-26414908 | None:intergenic | 40.0% | |
| CTTGAAGAAAGAATGGGAAG+GGG | + | chr7.4:26415561-26415580 | MS.gene058706:CDS | 40.0% | |
| GAACAAAATCTGCACCCTTA+CGG | - | chr7.4:26415159-26415178 | None:intergenic | 40.0% | |
| GACATCTGCACTAAATCCTT+CGG | - | chr7.4:26414897-26414916 | None:intergenic | 40.0% | |
| GACTATTATCAGGTGGAAAC+GGG | - | chr7.4:26414840-26414859 | None:intergenic | 40.0% | |
| GCCAACTAATTCTCGGTTAA+AGG | - | chr7.4:26415368-26415387 | None:intergenic | 40.0% | |
| GCCTTTAACCGAGAATTAGT+TGG | + | chr7.4:26415364-26415383 | MS.gene058706:CDS | 40.0% | |
| GCTTGAAGAAAGAATGGGAA+GGG | + | chr7.4:26415560-26415579 | MS.gene058706:CDS | 40.0% | |
| GGGAAACTGTGGAAGATATA+TGG | + | chr7.4:26415437-26415456 | MS.gene058706:CDS | 40.0% | |
| ! | GAATTTGGAGTTCTTCCTTG+AGG | - | chr7.4:26414874-26414893 | None:intergenic | 40.0% |
| ! | TAAAGAAGAAAGGTGTGGCA+GGG | - | chr7.4:26415117-26415136 | None:intergenic | 40.0% |
| ! | TTAAAGAAGAAAGGTGTGGC+AGG | - | chr7.4:26415118-26415137 | None:intergenic | 40.0% |
| !! | AAACTCTGAAATTGAGCGAG+TGG | + | chr7.4:26414922-26414941 | MS.gene058706:CDS | 40.0% |
| AAATCTGCACCCTTACGGAA+TGG | - | chr7.4:26415154-26415173 | None:intergenic | 45.0% | |
| ACCAGAGAAGCGAATAGAAG+TGG | - | chr7.4:26414957-26414976 | None:intergenic | 45.0% | |
| AGAATTAGTTGGCCCAGCAT+TGG | + | chr7.4:26415375-26415394 | MS.gene058706:CDS | 45.0% | |
| AGAGAAGCGAATAGAAGTGG+AGG | - | chr7.4:26414954-26414973 | None:intergenic | 45.0% | |
| AGTGAAGGAACAACTTGGGA+AGG | + | chr7.4:26415681-26415700 | MS.gene058706:CDS | 45.0% | |
| ATGCTGGGCCAACTAATTCT+CGG | - | chr7.4:26415375-26415394 | None:intergenic | 45.0% | |
| ATGGGAAGGGGTGAAATTGA+TGG | + | chr7.4:26415573-26415592 | MS.gene058706:CDS | 45.0% | |
| GAAGAACTCCAAATTCCCGA+AGG | + | chr7.4:26414878-26414897 | MS.gene058706:CDS | 45.0% | |
| TCAGCGGCTTTCGAAAACAT+AGG | - | chr7.4:26415712-26415731 | None:intergenic | 45.0% | |
| TCCACTTCTATTCGCTTCTC+TGG | + | chr7.4:26414953-26414972 | MS.gene058706:CDS | 45.0% | |
| TGTTCCAGCAAAAGATGACG+CGG | + | chr7.4:26415045-26415064 | MS.gene058706:CDS | 45.0% | |
| ! | AAAGAAGAAAGGTGTGGCAG+GGG | - | chr7.4:26415116-26415135 | None:intergenic | 45.0% |
| ! | TAAGCCTCGGTGTGAAAAGT+GGG | + | chr7.4:26415494-26415513 | MS.gene058706:CDS | 45.0% |
| ! | TCTGAAATTGAGCGAGTGGT+GGG | + | chr7.4:26414926-26414945 | MS.gene058706:CDS | 45.0% |
| !! | AAAGTGGGTTGCCGTATGTT+TGG | + | chr7.4:26415509-26415528 | MS.gene058706:CDS | 45.0% |
| !! | AAGGGTGCAGATTTTGTTCG+CGG | + | chr7.4:26415160-26415179 | MS.gene058706:CDS | 45.0% |
| !! | GCAATGTTGATTCCACTCAC+TGG | - | chr7.4:26415346-26415365 | None:intergenic | 45.0% |
| !! | GTTAAGCTCTGGAAGTCAGT+TGG | + | chr7.4:26415748-26415767 | MS.gene058706:CDS | 45.0% |
| AAAGCTCAGGTGGGAAACTG+TGG | + | chr7.4:26415426-26415445 | MS.gene058706:CDS | 50.0% | |
| ACCCATTTAGCCTCCGAAGT+GGG | + | chr7.4:26415185-26415204 | MS.gene058706:CDS | 50.0% | |
| AGGAGAAGGAAAGCTCAGGT+GGG | + | chr7.4:26415417-26415436 | MS.gene058706:CDS | 50.0% | |
| AGTCAAAGATCCTGCCCTCA+AGG | + | chr7.4:26414856-26414875 | MS.gene058706:CDS | 50.0% | |
| CAACATGGCTCTCGTAGGAA+CGG | - | chr7.4:26415323-26415342 | None:intergenic | 50.0% | |
| CGAGATGGCCAAATCAGTGA+AGG | + | chr7.4:26415666-26415685 | MS.gene058706:CDS | 50.0% | |
| GAGCACAATCAACCCCACTT+CGG | - | chr7.4:26415201-26415220 | None:intergenic | 50.0% | |
| GATTCCACTCACTGGCAACA+TGG | - | chr7.4:26415338-26415357 | None:intergenic | 50.0% | |
| GGAAGGGGTGAAATTGATGG+AGG | + | chr7.4:26415576-26415595 | MS.gene058706:CDS | 50.0% | |
| GGGGAATGTAGTAGATGCTG+TGG | + | chr7.4:26415066-26415085 | MS.gene058706:CDS | 50.0% | |
| GTTCCAGCAAAAGATGACGC+GGG | + | chr7.4:26415046-26415065 | MS.gene058706:CDS | 50.0% | |
| GTTGATTGTGCTCTGTCGTG+TGG | + | chr7.4:26415208-26415227 | MS.gene058706:CDS | 50.0% | |
| TACCCATTTAGCCTCCGAAG+TGG | + | chr7.4:26415184-26415203 | MS.gene058706:CDS | 50.0% | |
| TTCCAGCAAAAGATGACGCG+GGG | + | chr7.4:26415047-26415066 | MS.gene058706:CDS | 50.0% | |
| ! | ATTGGTCCCAGCTTTGGTGT+TGG | + | chr7.4:26415393-26415412 | MS.gene058706:CDS | 50.0% |
| ! | CACTTTTCACACCGAGGCTT+AGG | - | chr7.4:26415495-26415514 | None:intergenic | 50.0% |
| ! | CTAAGCCTCGGTGTGAAAAG+TGG | + | chr7.4:26415493-26415512 | MS.gene058706:CDS | 50.0% |
| ! | TTTTCACACCGAGGCTTAGG+TGG | - | chr7.4:26415492-26415511 | None:intergenic | 50.0% |
| !! | CTCTGAAATTGAGCGAGTGG+TGG | + | chr7.4:26414925-26414944 | MS.gene058706:CDS | 50.0% |
| ACAATCAGCTACGACGCCAG+AGG | + | chr7.4:26415633-26415652 | MS.gene058706:CDS | 55.0% | |
| ACCAAAGCTGGGACCAATGC+TGG | - | chr7.4:26415391-26415410 | None:intergenic | 55.0% | |
| ACCCCACTTCGGAGGCTAAA+TGG | - | chr7.4:26415190-26415209 | None:intergenic | 55.0% | |
| ACTGGCAACATGGCTCTCGT+AGG | - | chr7.4:26415328-26415347 | None:intergenic | 55.0% | |
| AGACCTAGATGCGCCAACAC+AGG | + | chr7.4:26415249-26415268 | MS.gene058706:CDS | 55.0% | |
| AGAGCCATGTTGCCAGTGAG+TGG | + | chr7.4:26415331-26415350 | MS.gene058706:CDS | 55.0% | |
| AGGCTCTCAAGCCAACACAG+AGG | + | chr7.4:26415269-26415288 | MS.gene058706:CDS | 55.0% | |
| CACAATCAACCCCACTTCGG+AGG | - | chr7.4:26415198-26415217 | None:intergenic | 55.0% | |
| CAGGAGAAGGAAAGCTCAGG+TGG | + | chr7.4:26415416-26415435 | MS.gene058706:CDS | 55.0% | |
| CCAAAGCTGGGACCAATGCT+GGG | - | chr7.4:26415390-26415409 | None:intergenic | 55.0% | |
| CCCATTTAGCCTCCGAAGTG+GGG | + | chr7.4:26415186-26415205 | MS.gene058706:CDS | 55.0% | |
| CCCCACTTCGGAGGCTAAAT+GGG | - | chr7.4:26415189-26415208 | None:intergenic | 55.0% | |
| CTCCTGCCAACACCAAAGCT+GGG | - | chr7.4:26415402-26415421 | None:intergenic | 55.0% | |
| GAGCTTAACCCACTCTGCCA+TGG | - | chr7.4:26415737-26415756 | None:intergenic | 55.0% | |
| GTATGCGACCACCTAAGCCT+CGG | + | chr7.4:26415481-26415500 | MS.gene058706:CDS | 55.0% | |
| TCTCCTGCCAACACCAAAGC+TGG | - | chr7.4:26415403-26415422 | None:intergenic | 55.0% | |
| TCTGGCGTCGTAGCTGATTG+TGG | - | chr7.4:26415634-26415653 | None:intergenic | 55.0% | |
| TGGAGTTCTTCCTTGAGGGC+AGG | - | chr7.4:26414869-26414888 | None:intergenic | 55.0% | |
| TGGCAGGAGAAGGAAAGCTC+AGG | + | chr7.4:26415413-26415432 | MS.gene058706:CDS | 55.0% | |
| TTCGAAAGCCGCTGATGCCA+TGG | + | chr7.4:26415717-26415736 | MS.gene058706:CDS | 55.0% | |
| ! | GTGTGGACTGTGGCTCAATC+TGG | + | chr7.4:26415225-26415244 | MS.gene058706:CDS | 55.0% |
| ! | TTCCCCGCGTCATCTTTTGC+TGG | - | chr7.4:26415052-26415071 | None:intergenic | 55.0% |
| !! | GCAACCCACTTTTCACACCG+AGG | - | chr7.4:26415501-26415520 | None:intergenic | 55.0% |
| !! | GCTTTGGTGTTGGCAGGAGA+AGG | + | chr7.4:26415403-26415422 | MS.gene058706:CDS | 55.0% |
| !! | GTTGGCTTGAGAGCCTGTGT+TGG | - | chr7.4:26415265-26415284 | None:intergenic | 55.0% |
| !! | TGGCAGAGTGGGTTAAGCTC+TGG | + | chr7.4:26415737-26415756 | MS.gene058706:CDS | 55.0% |
| AAGGTGTGGCAGGGGTCTTG+AGG | - | chr7.4:26415108-26415127 | None:intergenic | 60.0% | |
| AGAGGACTGCGTGGTCGAGA+TGG | + | chr7.4:26415651-26415670 | MS.gene058706:CDS | 60.0% | |
| ATCTCGACCACGCAGTCCTC+TGG | - | chr7.4:26415652-26415671 | None:intergenic | 60.0% | |
| CCACTCTGCCATGGCATCAG+CGG | - | chr7.4:26415728-26415747 | None:intergenic | 60.0% | |
| CGCTGATGCCATGGCAGAGT+GGG | + | chr7.4:26415726-26415745 | MS.gene058706:CDS | 60.0% | |
| ! | GAGCCTGTGTTGGCGCATCT+AGG | - | chr7.4:26415255-26415274 | None:intergenic | 60.0% |
| ! | GTGCTCTGTCGTGTGGACTG+TGG | + | chr7.4:26415215-26415234 | MS.gene058706:CDS | 60.0% |
| !! | CCCAGCATTGGTCCCAGCTT+TGG | + | chr7.4:26415387-26415406 | MS.gene058706:CDS | 60.0% |
| !! | GTCCCAGCTTTGGTGTTGGC+AGG | + | chr7.4:26415397-26415416 | MS.gene058706:CDS | 60.0% |
| CCGCTGATGCCATGGCAGAG+TGG | + | chr7.4:26415725-26415744 | MS.gene058706:CDS | 65.0% | |
| TACGACGCCAGAGGACTGCG+TGG | + | chr7.4:26415642-26415661 | MS.gene058706:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 26414737 | 26415780 | 26414737 | ID=MS.gene058706 |
| chr7.4 | mRNA | 26414737 | 26415780 | 26414737 | ID=MS.gene058706.t1;Parent=MS.gene058706 |
| chr7.4 | exon | 26414737 | 26415780 | 26414737 | ID=MS.gene058706.t1.exon1;Parent=MS.gene058706.t1 |
| chr7.4 | CDS | 26414737 | 26415780 | 26414737 | ID=cds.MS.gene058706.t1;Parent=MS.gene058706.t1 |
| Gene Sequence |
| Protein sequence |
