Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51185.t1 | XP_024626250.1 | 98.8 | 347 | 4 | 0 | 1 | 347 | 1 | 347 | 1.20E-198 | 702.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51185.t1 | Q9FFD2 | 71.8 | 347 | 98 | 0 | 1 | 347 | 1 | 347 | 8.5e-153 | 541.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51185.t1 | Q2HV87 | 98.8 | 347 | 4 | 0 | 1 | 347 | 1 | 347 | 8.6e-199 | 702.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055251 | MS.gene51185 | 0.810451 | 1.15E-50 | -1.69E-46 |
| MS.gene058706 | MS.gene51185 | 0.864581 | 1.10E-64 | -1.69E-46 |
| MS.gene061044 | MS.gene51185 | 0.839635 | 1.41E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51185.t1 | MTR_7g079490 | 98.847 | 347 | 4 | 0 | 1 | 347 | 1 | 347 | 0.0 | 707 |
| MS.gene51185.t1 | MTR_2g461970 | 51.453 | 344 | 161 | 3 | 2 | 344 | 5 | 343 | 1.34e-131 | 380 |
| MS.gene51185.t1 | MTR_5g046030 | 48.529 | 340 | 169 | 3 | 9 | 347 | 13 | 347 | 1.61e-126 | 367 |
| MS.gene51185.t1 | MTR_6g015905 | 49.412 | 340 | 166 | 3 | 9 | 347 | 10 | 344 | 2.59e-126 | 366 |
| MS.gene51185.t1 | MTR_7g015970 | 49.112 | 338 | 166 | 3 | 9 | 345 | 10 | 342 | 6.40e-125 | 363 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51185.t1 | AT5G16510 | 71.758 | 347 | 98 | 0 | 1 | 347 | 1 | 347 | 0.0 | 542 |
| MS.gene51185.t1 | AT5G16510 | 71.758 | 347 | 98 | 0 | 1 | 347 | 1 | 347 | 0.0 | 542 |
| MS.gene51185.t1 | AT3G02230 | 48.844 | 346 | 171 | 3 | 1 | 345 | 12 | 352 | 6.55e-126 | 365 |
| MS.gene51185.t1 | AT5G15650 | 48.817 | 338 | 167 | 3 | 9 | 345 | 20 | 352 | 9.93e-125 | 362 |
| MS.gene51185.t1 | AT3G08900 | 49.118 | 340 | 167 | 3 | 9 | 347 | 16 | 350 | 1.41e-123 | 360 |
| MS.gene51185.t1 | AT5G50750 | 48.817 | 338 | 167 | 3 | 9 | 345 | 16 | 348 | 3.09e-123 | 359 |
Find 108 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTAAATCCTTCGGGAATT+TGG | 0.098316 | 7.3:-27633368 | None:intergenic |
| GGTTACGCTTGTAGATATTT+TGG | 0.181272 | 7.3:+27633456 | MS.gene51185:CDS |
| ACCCCACTTCGGAGGCTAAA+TGG | 0.182922 | 7.3:-27633669 | None:intergenic |
| GCCAACTAATTCTCGGTTAA+AGG | 0.225160 | 7.3:-27633847 | None:intergenic |
| GACTTCCATTCATTCATAAA+AGG | 0.270719 | 7.3:-27633288 | None:intergenic |
| CCCAGCATTGGTCCCAGCTT+TGG | 0.273271 | 7.3:+27633869 | MS.gene51185:CDS |
| TTCTTTCTTCAAGCTGTCTA+TGG | 0.288528 | 7.3:-27634033 | None:intergenic |
| AAGTTGTTCCTTCACTGATT+TGG | 0.332158 | 7.3:-27634156 | None:intergenic |
| CAGGATCTTTGACTATTATC+AGG | 0.362076 | 7.3:-27633329 | None:intergenic |
| ACCAAAGCTGGGACCAATGC+TGG | 0.375478 | 7.3:-27633870 | None:intergenic |
| TCCACTTCTATTCGCTTCTC+TGG | 0.381049 | 7.3:+27633435 | MS.gene51185:CDS |
| GACTATTATCAGGTGGAAAC+GGG | 0.402580 | 7.3:-27633319 | None:intergenic |
| ATGGGAAGGGGTGAAATTGA+TGG | 0.404928 | 7.3:+27634055 | MS.gene51185:CDS |
| CCCCACTTCGGAGGCTAAAT+GGG | 0.405485 | 7.3:-27633668 | None:intergenic |
| GTCCCAGCTTTGGTGTTGGC+AGG | 0.407640 | 7.3:+27633879 | MS.gene51185:CDS |
| ATCTCGACCACGCAGTCCTC+TGG | 0.407680 | 7.3:-27634131 | None:intergenic |
| GACATCTGCACTAAATCCTT+CGG | 0.408413 | 7.3:-27633376 | None:intergenic |
| TCTCCTGCCAACACCAAAGC+TGG | 0.408713 | 7.3:-27633882 | None:intergenic |
| GTGTGGACTGTGGCTCAATC+TGG | 0.418802 | 7.3:+27633707 | MS.gene51185:CDS |
| ACATCTGCACTAAATCCTTC+GGG | 0.431937 | 7.3:-27633375 | None:intergenic |
| TGACTATTATCAGGTGGAAA+CGG | 0.435701 | 7.3:-27633320 | None:intergenic |
| AAAGTGGGTTGCCGTATGTT+TGG | 0.450892 | 7.3:+27633991 | MS.gene51185:CDS |
| ACCCATTTAGCCTCCGAAGT+GGG | 0.451793 | 7.3:+27633667 | MS.gene51185:CDS |
| GCCTTTAACCGAGAATTAGT+TGG | 0.454901 | 7.3:+27633846 | MS.gene51185:CDS |
| GGGAAACTGTGGAAGATATA+TGG | 0.454942 | 7.3:+27633919 | MS.gene51185:CDS |
| TAGACAGCTTGAAGAAAGAA+TGG | 0.467447 | 7.3:+27634036 | MS.gene51185:CDS |
| CGCTGATGCCATGGCAGAGT+GGG | 0.477662 | 7.3:+27634208 | MS.gene51185:CDS |
| AATTTGGAGTTCTTCCTTGA+GGG | 0.480278 | 7.3:-27633352 | None:intergenic |
| TATCTTGAATTCCTCTGTGT+TGG | 0.484553 | 7.3:-27633762 | None:intergenic |
| GAACAAAATCTGCACCCTTA+CGG | 0.484567 | 7.3:-27633638 | None:intergenic |
| ATGCTGGGCCAACTAATTCT+CGG | 0.493427 | 7.3:-27633854 | None:intergenic |
| TTAAAGAAGAAAGGTGTGGC+AGG | 0.494908 | 7.3:-27633597 | None:intergenic |
| CTTTCATTTCTCCAAACATA+CGG | 0.497867 | 7.3:-27634002 | None:intergenic |
| GAGCCTGTGTTGGCGCATCT+AGG | 0.503951 | 7.3:-27633734 | None:intergenic |
| AACTTTACAGACTGAAAGAA+AGG | 0.511586 | 7.3:-27634089 | None:intergenic |
| TATAGTGTATTAAAGAAGAA+AGG | 0.512361 | 7.3:-27633606 | None:intergenic |
| TGGCAGAGTGGGTTAAGCTC+TGG | 0.517333 | 7.3:+27634219 | MS.gene51185:CDS |
| TGGAGTTCTTCCTTGAGGGC+AGG | 0.518206 | 7.3:-27633348 | None:intergenic |
| TTCGAAAGCCGCTGATGCCA+TGG | 0.519664 | 7.3:+27634199 | MS.gene51185:CDS |
| AGAATTAGTTGGCCCAGCAT+TGG | 0.520079 | 7.3:+27633857 | MS.gene51185:CDS |
| ATTGGTCCCAGCTTTGGTGT+TGG | 0.521152 | 7.3:+27633875 | MS.gene51185:CDS |
| GCTTTGGTGTTGGCAGGAGA+AGG | 0.521241 | 7.3:+27633885 | MS.gene51185:CDS |
| AAATCAGTGAAGGAACAACT+TGG | 0.521373 | 7.3:+27634158 | MS.gene51185:CDS |
| CTAAGCCTCGGTGTGAAAAG+TGG | 0.526128 | 7.3:+27633975 | MS.gene51185:CDS |
| AGACAGCTTGAAGAAAGAAT+GGG | 0.532129 | 7.3:+27634037 | MS.gene51185:CDS |
| CCAAAGCTGGGACCAATGCT+GGG | 0.532879 | 7.3:-27633869 | None:intergenic |
| CTCTGAAATTGAGCGAGTGG+TGG | 0.538006 | 7.3:+27633407 | MS.gene51185:CDS |
| AGTCAAAGATCCTGCCCTCA+AGG | 0.538904 | 7.3:+27633338 | MS.gene51185:CDS |
| ACTATATGATCCATTCCGTA+AGG | 0.553697 | 7.3:+27633623 | MS.gene51185:CDS |
| CAGGAGAAGGAAAGCTCAGG+TGG | 0.555962 | 7.3:+27633898 | MS.gene51185:CDS |
| CTCCTGCCAACACCAAAGCT+GGG | 0.557867 | 7.3:-27633881 | None:intergenic |
| GATTCCACTCACTGGCAACA+TGG | 0.560139 | 7.3:-27633817 | None:intergenic |
| CCCATTTAGCCTCCGAAGTG+GGG | 0.561643 | 7.3:+27633668 | MS.gene51185:CDS |
| ACCAGAGAAGCGAATAGAAG+TGG | 0.561782 | 7.3:-27633436 | None:intergenic |
| GTTGGCTTGAGAGCCTGTGT+TGG | 0.565124 | 7.3:-27633744 | None:intergenic |
| AGAGGACTGCGTGGTCGAGA+TGG | 0.569270 | 7.3:+27634133 | MS.gene51185:CDS |
| AAATCTGCACCCTTACGGAA+TGG | 0.569993 | 7.3:-27633633 | None:intergenic |
| TCTGGCGTCGTAGCTGATTG+TGG | 0.570688 | 7.3:-27634113 | None:intergenic |
| GAATTTGGAGTTCTTCCTTG+AGG | 0.571672 | 7.3:-27633353 | None:intergenic |
| TCTGAAATTGAGCGAGTGGT+GGG | 0.574447 | 7.3:+27633408 | MS.gene51185:CDS |
| GTTGATTGTGCTCTGTCGTG+TGG | 0.577748 | 7.3:+27633690 | MS.gene51185:CDS |
| AGACCTAGATGCGCCAACAC+AGG | 0.578067 | 7.3:+27633731 | MS.gene51185:CDS |
| GTTAAGCTCTGGAAGTCAGT+TGG | 0.579934 | 7.3:+27634230 | MS.gene51185:CDS |
| AACGAAGTTGACATTGTGAT+CGG | 0.584032 | 7.3:+27633243 | MS.gene51185:CDS |
| GCAATGTTGATTCCACTCAC+TGG | 0.584544 | 7.3:-27633825 | None:intergenic |
| TGGCAGGAGAAGGAAAGCTC+AGG | 0.584833 | 7.3:+27633895 | MS.gene51185:CDS |
| AGAGCCATGTTGCCAGTGAG+TGG | 0.586101 | 7.3:+27633813 | MS.gene51185:CDS |
| AAAGAAGAAAGGTGTGGCAG+GGG | 0.586422 | 7.3:-27633595 | None:intergenic |
| GCTTGAAGAAAGAATGGGAA+GGG | 0.593851 | 7.3:+27634042 | MS.gene51185:CDS |
| GAGCTTAACCCACTCTGCCA+TGG | 0.594397 | 7.3:-27634216 | None:intergenic |
| TAAGCCTCGGTGTGAAAAGT+GGG | 0.598697 | 7.3:+27633976 | MS.gene51185:CDS |
| CTATATGATCCATTCCGTAA+GGG | 0.604465 | 7.3:+27633624 | MS.gene51185:CDS |
| CCACTCTGCCATGGCATCAG+CGG | 0.607023 | 7.3:-27634207 | None:intergenic |
| GTGCTCTGTCGTGTGGACTG+TGG | 0.608262 | 7.3:+27633697 | MS.gene51185:CDS |
| TATGTTTGGAGAAATGAAAG+AGG | 0.608956 | 7.3:+27634005 | MS.gene51185:CDS |
| TGTATTAAAGAAGAAAGGTG+TGG | 0.611182 | 7.3:-27633601 | None:intergenic |
| AAGGTGTGGCAGGGGTCTTG+AGG | 0.612175 | 7.3:-27633587 | None:intergenic |
| AAAGCTCAGGTGGGAAACTG+TGG | 0.612768 | 7.3:+27633908 | MS.gene51185:CDS |
| CGAGATGGCCAAATCAGTGA+AGG | 0.615435 | 7.3:+27634148 | MS.gene51185:CDS |
| GATCTTTGACTATTATCAGG+TGG | 0.616826 | 7.3:-27633326 | None:intergenic |
| GTATGCGACCACCTAAGCCT+CGG | 0.617533 | 7.3:+27633963 | MS.gene51185:CDS |
| TAAAGAAGAAAGGTGTGGCA+GGG | 0.617653 | 7.3:-27633596 | None:intergenic |
| CCGCTGATGCCATGGCAGAG+TGG | 0.618375 | 7.3:+27634207 | MS.gene51185:CDS |
| AGTGAAGGAACAACTTGGGA+AGG | 0.619719 | 7.3:+27634163 | MS.gene51185:CDS |
| TACCCATTTAGCCTCCGAAG+TGG | 0.620536 | 7.3:+27633666 | MS.gene51185:CDS |
| AGAGAAGCGAATAGAAGTGG+AGG | 0.622245 | 7.3:-27633433 | None:intergenic |
| CAACATGGCTCTCGTAGGAA+CGG | 0.623643 | 7.3:-27633802 | None:intergenic |
| AATCAGTGAAGGAACAACTT+GGG | 0.624801 | 7.3:+27634159 | MS.gene51185:CDS |
| ATTCATTCATAAAAGGAGTG+AGG | 0.628201 | 7.3:-27633281 | None:intergenic |
| GGAAGGGGTGAAATTGATGG+AGG | 0.629194 | 7.3:+27634058 | MS.gene51185:CDS |
| AAACTCTGAAATTGAGCGAG+TGG | 0.630141 | 7.3:+27633404 | MS.gene51185:CDS |
| GAGCACAATCAACCCCACTT+CGG | 0.641756 | 7.3:-27633680 | None:intergenic |
| CACAATCAACCCCACTTCGG+AGG | 0.642239 | 7.3:-27633677 | None:intergenic |
| CTTGAAGAAAGAATGGGAAG+GGG | 0.643591 | 7.3:+27634043 | MS.gene51185:CDS |
| ACTGGCAACATGGCTCTCGT+AGG | 0.644873 | 7.3:-27633807 | None:intergenic |
| GTTCCAGCAAAAGATGACGC+GGG | 0.649072 | 7.3:+27633528 | MS.gene51185:CDS |
| AGCTTGAAGAAAGAATGGGA+AGG | 0.654031 | 7.3:+27634041 | MS.gene51185:CDS |
| TCAGCGGCTTTCGAAAACAT+AGG | 0.655253 | 7.3:-27634191 | None:intergenic |
| GGGGAATGTAGTAGATGCTG+TGG | 0.657954 | 7.3:+27633548 | MS.gene51185:CDS |
| TTCCAGCAAAAGATGACGCG+GGG | 0.659790 | 7.3:+27633529 | MS.gene51185:CDS |
| TGTTCCAGCAAAAGATGACG+CGG | 0.661904 | 7.3:+27633527 | MS.gene51185:CDS |
| GAAGAACTCCAAATTCCCGA+AGG | 0.676927 | 7.3:+27633360 | MS.gene51185:CDS |
| AGGAGAAGGAAAGCTCAGGT+GGG | 0.684548 | 7.3:+27633899 | MS.gene51185:CDS |
| ACAATCAGCTACGACGCCAG+AGG | 0.686961 | 7.3:+27634115 | MS.gene51185:CDS |
| ACTGTGGAAGATATATGGTG+TGG | 0.687243 | 7.3:+27633924 | MS.gene51185:CDS |
| ACAGAGGAATTCAAGATACG+TGG | 0.688219 | 7.3:+27633767 | MS.gene51185:CDS |
| TACGACGCCAGAGGACTGCG+TGG | 0.738114 | 7.3:+27634124 | MS.gene51185:CDS |
| AGGCTCTCAAGCCAACACAG+AGG | 0.778427 | 7.3:+27633751 | MS.gene51185:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAGTGTATTAAAGAAGAA+AGG | - | chr7.3:27633609-27633628 | None:intergenic | 20.0% |
| AACTTTACAGACTGAAAGAA+AGG | - | chr7.3:27634092-27634111 | None:intergenic | 30.0% | |
| ATTCATTCATAAAAGGAGTG+AGG | - | chr7.3:27633284-27633303 | None:intergenic | 30.0% | |
| CTTTCATTTCTCCAAACATA+CGG | - | chr7.3:27634005-27634024 | None:intergenic | 30.0% | |
| GACTTCCATTCATTCATAAA+AGG | - | chr7.3:27633291-27633310 | None:intergenic | 30.0% | |
| TATGTTTGGAGAAATGAAAG+AGG | + | chr7.3:27634005-27634024 | MS.gene51185:CDS | 30.0% | |
| TGTATTAAAGAAGAAAGGTG+TGG | - | chr7.3:27633604-27633623 | None:intergenic | 30.0% | |
| ! | TCACTCCTTTTATGAATGAA+TGG | + | chr7.3:27633283-27633302 | MS.gene51185:CDS | 30.0% |
| AAATCAGTGAAGGAACAACT+TGG | + | chr7.3:27634158-27634177 | MS.gene51185:CDS | 35.0% | |
| AACGAAGTTGACATTGTGAT+CGG | + | chr7.3:27633243-27633262 | MS.gene51185:CDS | 35.0% | |
| AATCAGTGAAGGAACAACTT+GGG | + | chr7.3:27634159-27634178 | MS.gene51185:CDS | 35.0% | |
| ACTATATGATCCATTCCGTA+AGG | + | chr7.3:27633623-27633642 | MS.gene51185:CDS | 35.0% | |
| AGACAGCTTGAAGAAAGAAT+GGG | + | chr7.3:27634037-27634056 | MS.gene51185:CDS | 35.0% | |
| CAGGATCTTTGACTATTATC+AGG | - | chr7.3:27633332-27633351 | None:intergenic | 35.0% | |
| CTATATGATCCATTCCGTAA+GGG | + | chr7.3:27633624-27633643 | MS.gene51185:CDS | 35.0% | |
| GATCTTTGACTATTATCAGG+TGG | - | chr7.3:27633329-27633348 | None:intergenic | 35.0% | |
| TAGACAGCTTGAAGAAAGAA+TGG | + | chr7.3:27634036-27634055 | MS.gene51185:CDS | 35.0% | |
| TATCTTGAATTCCTCTGTGT+TGG | - | chr7.3:27633765-27633784 | None:intergenic | 35.0% | |
| TGACTATTATCAGGTGGAAA+CGG | - | chr7.3:27633323-27633342 | None:intergenic | 35.0% | |
| TTCTTTCTTCAAGCTGTCTA+TGG | - | chr7.3:27634036-27634055 | None:intergenic | 35.0% | |
| ! | AAGTTGTTCCTTCACTGATT+TGG | - | chr7.3:27634159-27634178 | None:intergenic | 35.0% |
| ! | AATTTGGAGTTCTTCCTTGA+GGG | - | chr7.3:27633355-27633374 | None:intergenic | 35.0% |
| ! | GGTTACGCTTGTAGATATTT+TGG | + | chr7.3:27633456-27633475 | MS.gene51185:CDS | 35.0% |
| ACAGAGGAATTCAAGATACG+TGG | + | chr7.3:27633767-27633786 | MS.gene51185:CDS | 40.0% | |
| ACATCTGCACTAAATCCTTC+GGG | - | chr7.3:27633378-27633397 | None:intergenic | 40.0% | |
| ACTGTGGAAGATATATGGTG+TGG | + | chr7.3:27633924-27633943 | MS.gene51185:CDS | 40.0% | |
| AGCTTGAAGAAAGAATGGGA+AGG | + | chr7.3:27634041-27634060 | MS.gene51185:CDS | 40.0% | |
| CACTAAATCCTTCGGGAATT+TGG | - | chr7.3:27633371-27633390 | None:intergenic | 40.0% | |
| CTTGAAGAAAGAATGGGAAG+GGG | + | chr7.3:27634043-27634062 | MS.gene51185:CDS | 40.0% | |
| GAACAAAATCTGCACCCTTA+CGG | - | chr7.3:27633641-27633660 | None:intergenic | 40.0% | |
| GACATCTGCACTAAATCCTT+CGG | - | chr7.3:27633379-27633398 | None:intergenic | 40.0% | |
| GACTATTATCAGGTGGAAAC+GGG | - | chr7.3:27633322-27633341 | None:intergenic | 40.0% | |
| GCCAACTAATTCTCGGTTAA+AGG | - | chr7.3:27633850-27633869 | None:intergenic | 40.0% | |
| GCCTTTAACCGAGAATTAGT+TGG | + | chr7.3:27633846-27633865 | MS.gene51185:CDS | 40.0% | |
| GCTTGAAGAAAGAATGGGAA+GGG | + | chr7.3:27634042-27634061 | MS.gene51185:CDS | 40.0% | |
| GGGAAACTGTGGAAGATATA+TGG | + | chr7.3:27633919-27633938 | MS.gene51185:CDS | 40.0% | |
| ! | GAATTTGGAGTTCTTCCTTG+AGG | - | chr7.3:27633356-27633375 | None:intergenic | 40.0% |
| ! | TAAAGAAGAAAGGTGTGGCA+GGG | - | chr7.3:27633599-27633618 | None:intergenic | 40.0% |
| ! | TTAAAGAAGAAAGGTGTGGC+AGG | - | chr7.3:27633600-27633619 | None:intergenic | 40.0% |
| !! | AAACTCTGAAATTGAGCGAG+TGG | + | chr7.3:27633404-27633423 | MS.gene51185:CDS | 40.0% |
| AAATCTGCACCCTTACGGAA+TGG | - | chr7.3:27633636-27633655 | None:intergenic | 45.0% | |
| ACCAGAGAAGCGAATAGAAG+TGG | - | chr7.3:27633439-27633458 | None:intergenic | 45.0% | |
| AGAATTAGTTGGCCCAGCAT+TGG | + | chr7.3:27633857-27633876 | MS.gene51185:CDS | 45.0% | |
| AGAGAAGCGAATAGAAGTGG+AGG | - | chr7.3:27633436-27633455 | None:intergenic | 45.0% | |
| AGTGAAGGAACAACTTGGGA+AGG | + | chr7.3:27634163-27634182 | MS.gene51185:CDS | 45.0% | |
| ATGCTGGGCCAACTAATTCT+CGG | - | chr7.3:27633857-27633876 | None:intergenic | 45.0% | |
| ATGGGAAGGGGTGAAATTGA+TGG | + | chr7.3:27634055-27634074 | MS.gene51185:CDS | 45.0% | |
| GAAGAACTCCAAATTCCCGA+AGG | + | chr7.3:27633360-27633379 | MS.gene51185:CDS | 45.0% | |
| TCAGCGGCTTTCGAAAACAT+AGG | - | chr7.3:27634194-27634213 | None:intergenic | 45.0% | |
| TCCACTTCTATTCGCTTCTC+TGG | + | chr7.3:27633435-27633454 | MS.gene51185:CDS | 45.0% | |
| TGTTCCAGCAAAAGATGACG+CGG | + | chr7.3:27633527-27633546 | MS.gene51185:CDS | 45.0% | |
| ! | AAAGAAGAAAGGTGTGGCAG+GGG | - | chr7.3:27633598-27633617 | None:intergenic | 45.0% |
| ! | TAAGCCTCGGTGTGAAAAGT+GGG | + | chr7.3:27633976-27633995 | MS.gene51185:CDS | 45.0% |
| ! | TCTGAAATTGAGCGAGTGGT+GGG | + | chr7.3:27633408-27633427 | MS.gene51185:CDS | 45.0% |
| !! | AAAGTGGGTTGCCGTATGTT+TGG | + | chr7.3:27633991-27634010 | MS.gene51185:CDS | 45.0% |
| !! | AAGGGTGCAGATTTTGTTCG+CGG | + | chr7.3:27633642-27633661 | MS.gene51185:CDS | 45.0% |
| !! | GCAATGTTGATTCCACTCAC+TGG | - | chr7.3:27633828-27633847 | None:intergenic | 45.0% |
| !! | GTTAAGCTCTGGAAGTCAGT+TGG | + | chr7.3:27634230-27634249 | MS.gene51185:CDS | 45.0% |
| AAAGCTCAGGTGGGAAACTG+TGG | + | chr7.3:27633908-27633927 | MS.gene51185:CDS | 50.0% | |
| ACCCATTTAGCCTCCGAAGT+GGG | + | chr7.3:27633667-27633686 | MS.gene51185:CDS | 50.0% | |
| AGGAGAAGGAAAGCTCAGGT+GGG | + | chr7.3:27633899-27633918 | MS.gene51185:CDS | 50.0% | |
| AGTCAAAGATCCTGCCCTCA+AGG | + | chr7.3:27633338-27633357 | MS.gene51185:CDS | 50.0% | |
| CAACATGGCTCTCGTAGGAA+CGG | - | chr7.3:27633805-27633824 | None:intergenic | 50.0% | |
| CGAGATGGCCAAATCAGTGA+AGG | + | chr7.3:27634148-27634167 | MS.gene51185:CDS | 50.0% | |
| GAGCACAATCAACCCCACTT+CGG | - | chr7.3:27633683-27633702 | None:intergenic | 50.0% | |
| GATTCCACTCACTGGCAACA+TGG | - | chr7.3:27633820-27633839 | None:intergenic | 50.0% | |
| GGAAGGGGTGAAATTGATGG+AGG | + | chr7.3:27634058-27634077 | MS.gene51185:CDS | 50.0% | |
| GGGGAATGTAGTAGATGCTG+TGG | + | chr7.3:27633548-27633567 | MS.gene51185:CDS | 50.0% | |
| GTTCCAGCAAAAGATGACGC+GGG | + | chr7.3:27633528-27633547 | MS.gene51185:CDS | 50.0% | |
| GTTGATTGTGCTCTGTCGTG+TGG | + | chr7.3:27633690-27633709 | MS.gene51185:CDS | 50.0% | |
| TACCCATTTAGCCTCCGAAG+TGG | + | chr7.3:27633666-27633685 | MS.gene51185:CDS | 50.0% | |
| TTCCAGCAAAAGATGACGCG+GGG | + | chr7.3:27633529-27633548 | MS.gene51185:CDS | 50.0% | |
| ! | ATTGGTCCCAGCTTTGGTGT+TGG | + | chr7.3:27633875-27633894 | MS.gene51185:CDS | 50.0% |
| ! | CACTTTTCACACCGAGGCTT+AGG | - | chr7.3:27633977-27633996 | None:intergenic | 50.0% |
| ! | CTAAGCCTCGGTGTGAAAAG+TGG | + | chr7.3:27633975-27633994 | MS.gene51185:CDS | 50.0% |
| ! | TTTTCACACCGAGGCTTAGG+TGG | - | chr7.3:27633974-27633993 | None:intergenic | 50.0% |
| !! | CTCTGAAATTGAGCGAGTGG+TGG | + | chr7.3:27633407-27633426 | MS.gene51185:CDS | 50.0% |
| ACAATCAGCTACGACGCCAG+AGG | + | chr7.3:27634115-27634134 | MS.gene51185:CDS | 55.0% | |
| ACCAAAGCTGGGACCAATGC+TGG | - | chr7.3:27633873-27633892 | None:intergenic | 55.0% | |
| ACCCCACTTCGGAGGCTAAA+TGG | - | chr7.3:27633672-27633691 | None:intergenic | 55.0% | |
| ACTGGCAACATGGCTCTCGT+AGG | - | chr7.3:27633810-27633829 | None:intergenic | 55.0% | |
| AGACCTAGATGCGCCAACAC+AGG | + | chr7.3:27633731-27633750 | MS.gene51185:CDS | 55.0% | |
| AGAGCCATGTTGCCAGTGAG+TGG | + | chr7.3:27633813-27633832 | MS.gene51185:CDS | 55.0% | |
| AGGCTCTCAAGCCAACACAG+AGG | + | chr7.3:27633751-27633770 | MS.gene51185:CDS | 55.0% | |
| CACAATCAACCCCACTTCGG+AGG | - | chr7.3:27633680-27633699 | None:intergenic | 55.0% | |
| CAGGAGAAGGAAAGCTCAGG+TGG | + | chr7.3:27633898-27633917 | MS.gene51185:CDS | 55.0% | |
| CCAAAGCTGGGACCAATGCT+GGG | - | chr7.3:27633872-27633891 | None:intergenic | 55.0% | |
| CCCATTTAGCCTCCGAAGTG+GGG | + | chr7.3:27633668-27633687 | MS.gene51185:CDS | 55.0% | |
| CCCCACTTCGGAGGCTAAAT+GGG | - | chr7.3:27633671-27633690 | None:intergenic | 55.0% | |
| CTCCTGCCAACACCAAAGCT+GGG | - | chr7.3:27633884-27633903 | None:intergenic | 55.0% | |
| GAGCTTAACCCACTCTGCCA+TGG | - | chr7.3:27634219-27634238 | None:intergenic | 55.0% | |
| GTATGCGACCACCTAAGCCT+CGG | + | chr7.3:27633963-27633982 | MS.gene51185:CDS | 55.0% | |
| TCTCCTGCCAACACCAAAGC+TGG | - | chr7.3:27633885-27633904 | None:intergenic | 55.0% | |
| TCTGGCGTCGTAGCTGATTG+TGG | - | chr7.3:27634116-27634135 | None:intergenic | 55.0% | |
| TGGAGTTCTTCCTTGAGGGC+AGG | - | chr7.3:27633351-27633370 | None:intergenic | 55.0% | |
| TGGCAGGAGAAGGAAAGCTC+AGG | + | chr7.3:27633895-27633914 | MS.gene51185:CDS | 55.0% | |
| TTCGAAAGCCGCTGATGCCA+TGG | + | chr7.3:27634199-27634218 | MS.gene51185:CDS | 55.0% | |
| ! | GTGTGGACTGTGGCTCAATC+TGG | + | chr7.3:27633707-27633726 | MS.gene51185:CDS | 55.0% |
| ! | TTCCCCGCGTCATCTTTTGC+TGG | - | chr7.3:27633534-27633553 | None:intergenic | 55.0% |
| !! | GCAACCCACTTTTCACACCG+AGG | - | chr7.3:27633983-27634002 | None:intergenic | 55.0% |
| !! | GCTTTGGTGTTGGCAGGAGA+AGG | + | chr7.3:27633885-27633904 | MS.gene51185:CDS | 55.0% |
| !! | GTTGGCTTGAGAGCCTGTGT+TGG | - | chr7.3:27633747-27633766 | None:intergenic | 55.0% |
| !! | TGGCAGAGTGGGTTAAGCTC+TGG | + | chr7.3:27634219-27634238 | MS.gene51185:CDS | 55.0% |
| AAGGTGTGGCAGGGGTCTTG+AGG | - | chr7.3:27633590-27633609 | None:intergenic | 60.0% | |
| AGAGGACTGCGTGGTCGAGA+TGG | + | chr7.3:27634133-27634152 | MS.gene51185:CDS | 60.0% | |
| ATCTCGACCACGCAGTCCTC+TGG | - | chr7.3:27634134-27634153 | None:intergenic | 60.0% | |
| CCACTCTGCCATGGCATCAG+CGG | - | chr7.3:27634210-27634229 | None:intergenic | 60.0% | |
| CGCTGATGCCATGGCAGAGT+GGG | + | chr7.3:27634208-27634227 | MS.gene51185:CDS | 60.0% | |
| ! | GAGCCTGTGTTGGCGCATCT+AGG | - | chr7.3:27633737-27633756 | None:intergenic | 60.0% |
| ! | GTGCTCTGTCGTGTGGACTG+TGG | + | chr7.3:27633697-27633716 | MS.gene51185:CDS | 60.0% |
| !! | CCCAGCATTGGTCCCAGCTT+TGG | + | chr7.3:27633869-27633888 | MS.gene51185:CDS | 60.0% |
| !! | GTCCCAGCTTTGGTGTTGGC+AGG | + | chr7.3:27633879-27633898 | MS.gene51185:CDS | 60.0% |
| CCGCTGATGCCATGGCAGAG+TGG | + | chr7.3:27634207-27634226 | MS.gene51185:CDS | 65.0% | |
| TACGACGCCAGAGGACTGCG+TGG | + | chr7.3:27634124-27634143 | MS.gene51185:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 27633219 | 27634262 | 27633219 | ID=MS.gene51185 |
| chr7.3 | mRNA | 27633219 | 27634262 | 27633219 | ID=MS.gene51185.t1;Parent=MS.gene51185 |
| chr7.3 | exon | 27633219 | 27634262 | 27633219 | ID=MS.gene51185.t1.exon1;Parent=MS.gene51185.t1 |
| chr7.3 | CDS | 27633219 | 27634262 | 27633219 | ID=cds.MS.gene51185.t1;Parent=MS.gene51185.t1 |
| Gene Sequence |
| Protein sequence |
