Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058724.t1 | XP_003624167.1 | 98.5 | 202 | 3 | 0 | 1 | 202 | 1 | 202 | 7.20E-111 | 409.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058724.t1 | Q681Z2 | 66.5 | 197 | 65 | 1 | 3 | 198 | 1 | 197 | 2.1e-74 | 280.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058724.t1 | Q2HVZ9 | 98.5 | 202 | 3 | 0 | 1 | 202 | 1 | 202 | 5.2e-111 | 409.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058724 | MS.gene07397 | 0.805321 | 1.41E-49 | -1.69E-46 |
| MS.gene058724 | MS.gene24491 | 0.808926 | 2.44E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058724.t1 | MTR_7g079970 | 98.515 | 202 | 3 | 0 | 1 | 202 | 1 | 202 | 6.59e-150 | 414 |
| MS.gene058724.t1 | MTR_5g085300 | 61.212 | 165 | 64 | 0 | 5 | 169 | 46 | 210 | 1.87e-74 | 224 |
| MS.gene058724.t1 | MTR_5g085300 | 63.576 | 151 | 55 | 0 | 5 | 155 | 46 | 196 | 2.61e-70 | 213 |
| MS.gene058724.t1 | MTR_4g132810 | 58.385 | 161 | 67 | 0 | 9 | 169 | 27 | 187 | 4.72e-69 | 209 |
| MS.gene058724.t1 | MTR_5g085300 | 59.483 | 116 | 47 | 0 | 5 | 120 | 46 | 161 | 2.85e-44 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058724.t1 | AT3G02800 | 66.497 | 197 | 65 | 1 | 3 | 198 | 1 | 197 | 4.23e-98 | 283 |
| MS.gene058724.t1 | AT5G16480 | 65.049 | 206 | 64 | 3 | 1 | 201 | 1 | 203 | 3.64e-95 | 276 |
| MS.gene058724.t1 | AT1G05000 | 64.238 | 151 | 54 | 0 | 17 | 167 | 53 | 203 | 2.21e-68 | 208 |
| MS.gene058724.t1 | AT4G03960 | 57.419 | 155 | 66 | 0 | 15 | 169 | 27 | 181 | 3.94e-63 | 194 |
| MS.gene058724.t1 | AT1G05000 | 53.514 | 185 | 54 | 2 | 17 | 169 | 53 | 237 | 8.36e-63 | 195 |
| MS.gene058724.t1 | AT2G32960 | 48.691 | 191 | 64 | 1 | 13 | 169 | 57 | 247 | 1.52e-61 | 192 |
| MS.gene058724.t1 | AT5G16480 | 70.238 | 84 | 22 | 1 | 1 | 84 | 1 | 81 | 5.54e-35 | 119 |
| MS.gene058724.t1 | AT1G05000 | 71.642 | 67 | 19 | 0 | 17 | 83 | 53 | 119 | 3.35e-28 | 104 |
Find 54 sgRNAs with CRISPR-Local
Find 109 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTTGCAATGAACCAAAAT+AGG | 0.169489 | 7.4:+26219383 | None:intergenic |
| TGTGAGAAATCACCCTATTT+TGG | 0.209389 | 7.4:-26219396 | MS.gene058724:CDS |
| ACCCTATCCCGAAGAGAATT+TGG | 0.260001 | 7.4:-26220351 | MS.gene058724:CDS |
| AGAGAATTTGGAGTTCTTAA+AGG | 0.262009 | 7.4:-26220339 | MS.gene058724:CDS |
| TCTTCAACCATGGAGAAATT+TGG | 0.290243 | 7.4:+26220547 | None:intergenic |
| TGCTCTGAGGGATTCTATTA+TGG | 0.312759 | 7.4:-26219566 | MS.gene058724:CDS |
| CATAGGACAGGTTGCCTTGT+TGG | 0.318667 | 7.4:-26219242 | MS.gene058724:CDS |
| AAGAACTCCAAATTCTCTTC+GGG | 0.335320 | 7.4:+26220344 | None:intergenic |
| TTCTCTTCGGGATAGGGTTC+AGG | 0.342295 | 7.4:+26220356 | None:intergenic |
| GCTTCAGAAAGTTGCAGAAT+TGG | 0.346755 | 7.4:-26219217 | MS.gene058724:CDS |
| GAGGAGTATCAGCGATTTGC+TGG | 0.359295 | 7.4:-26219176 | MS.gene058724:CDS |
| GTTTGCAATGAACCAAAATA+GGG | 0.378578 | 7.4:+26219384 | None:intergenic |
| AAGGGAAAACTGGAAGGTTT+AGG | 0.384197 | 7.4:+26220502 | None:intergenic |
| TAAGAACTCCAAATTCTCTT+CGG | 0.390807 | 7.4:+26220343 | None:intergenic |
| GGTTTGAAGAAAGGGAAAAC+TGG | 0.396149 | 7.4:+26220492 | None:intergenic |
| TCCAAATTCTCTTCGGGATA+GGG | 0.404516 | 7.4:+26220350 | None:intergenic |
| AAGGTTGAGGGTTTGAAGAA+AGG | 0.421342 | 7.4:+26220483 | None:intergenic |
| GTGTTTGTCTTCCGCGTTTG+AGG | 0.428171 | 7.4:-26219195 | MS.gene058724:CDS |
| GATTTGCTGGTGTTAAATCC+AGG | 0.432715 | 7.4:-26219163 | MS.gene058724:CDS |
| AGGTTGAGGGTTTGAAGAAA+GGG | 0.440281 | 7.4:+26220484 | None:intergenic |
| GGTTTGACCTCGTAAGTCTT+AGG | 0.449851 | 7.4:-26219115 | MS.gene058724:CDS |
| GACTCTGTAAATTCTCATCT+TGG | 0.454525 | 7.4:+26219030 | None:intergenic |
| ATCTTTATGCAGCATAGGAC+AGG | 0.458017 | 7.4:-26219254 | MS.gene058724:intron |
| CTCCAAATTCTCTTCGGGAT+AGG | 0.463257 | 7.4:+26220349 | None:intergenic |
| AAATGTTAAATCCGCTGCCC+TGG | 0.469169 | 7.4:+26219145 | None:intergenic |
| CATGATAGAGCGAAGGTTGA+GGG | 0.471110 | 7.4:+26220471 | None:intergenic |
| ATAAATGCAATCTTCAACCA+TGG | 0.485613 | 7.4:+26220537 | None:intergenic |
| TCTTTGAAGCACCTTGGTAC+TGG | 0.489070 | 7.4:+26219069 | None:intergenic |
| GCAGCTAAAATGATGTCAGC+CGG | 0.526267 | 7.4:+26219006 | None:intergenic |
| CGGATTTAACATTTATAGAG+AGG | 0.527211 | 7.4:-26219136 | MS.gene058724:CDS |
| GGTTCATTGCAAACAAGGAA+AGG | 0.528428 | 7.4:-26219375 | MS.gene058724:intron |
| ACATGATAGAGCGAAGGTTG+AGG | 0.535379 | 7.4:+26220470 | None:intergenic |
| CAGCTAAAATGATGTCAGCC+GGG | 0.536546 | 7.4:+26219007 | None:intergenic |
| TCCTCCACCAAATTTCTCCA+TGG | 0.537020 | 7.4:-26220554 | MS.gene058724:CDS |
| AGAATCCCTCAGAGCAGGTA+AGG | 0.540312 | 7.4:+26219573 | None:intergenic |
| TCAACCATGGAGAAATTTGG+TGG | 0.540768 | 7.4:+26220550 | None:intergenic |
| AGTTTCCTTACCTGCTCTGA+GGG | 0.541367 | 7.4:-26219578 | MS.gene058724:CDS |
| ATAATAGAATCCCTCAGAGC+AGG | 0.553968 | 7.4:+26219568 | None:intergenic |
| ATTTGGAATCGAGGGCAAAA+CGG | 0.561591 | 7.4:-26220294 | MS.gene058724:intron |
| ATGAGAATTTACAGAGTCCC+CGG | 0.562012 | 7.4:-26219025 | MS.gene058724:CDS |
| TGCGCTTCTTTGAAGCACCT+TGG | 0.567421 | 7.4:+26219063 | None:intergenic |
| TGAAGAAAGGGAAAACTGGA+AGG | 0.573241 | 7.4:+26220496 | None:intergenic |
| TCTGAGGGATTCTATTATGG+AGG | 0.578245 | 7.4:-26219563 | MS.gene058724:CDS |
| TGGTGTTAAATCCAGGGCAG+CGG | 0.584305 | 7.4:-26219156 | MS.gene058724:CDS |
| ATTTGCTGGTGTTAAATCCA+GGG | 0.594403 | 7.4:-26219162 | MS.gene058724:CDS |
| ACCATGGAGAAATTTGGTGG+AGG | 0.596016 | 7.4:+26220553 | None:intergenic |
| ACTTTCTGAAGCAGCCAACA+AGG | 0.599002 | 7.4:+26219228 | None:intergenic |
| AAGGTGCTTCAAAGAAGCGC+AGG | 0.614369 | 7.4:-26219061 | MS.gene058724:CDS |
| AAGTTTCCTTACCTGCTCTG+AGG | 0.620871 | 7.4:-26219579 | MS.gene058724:CDS |
| AAACTAACATGATAGAGCGA+AGG | 0.636224 | 7.4:+26220464 | None:intergenic |
| AGCTAAAATGATGTCAGCCG+GGG | 0.678842 | 7.4:+26219008 | None:intergenic |
| AGCATCATCTACCAGTACCA+AGG | 0.693429 | 7.4:-26219080 | MS.gene058724:CDS |
| GACACTGCCTAAGACTTACG+AGG | 0.727290 | 7.4:+26219108 | None:intergenic |
| TCGCTGATACTCCTCAAACG+CGG | 0.736711 | 7.4:+26219184 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAAACATAAAATTAGA+AGG | + | chr7.4:26220309-26220328 | None:intergenic | 10.0% |
| !! | CATTAGAATTATAGAATTAT+AGG | + | chr7.4:26220333-26220352 | None:intergenic | 15.0% |
| !! | AGTTTATCATAAATATGAGT+TGG | - | chr7.4:26219888-26219907 | MS.gene058724:intron | 20.0% |
| !! | TTTGAAGGAAATTAGATTAT+GGG | - | chr7.4:26219638-26219657 | MS.gene058724:intron | 20.0% |
| !!! | AATATTCGTCTTTTTCAATT+TGG | - | chr7.4:26219306-26219325 | MS.gene058724:intron | 20.0% |
| !!! | TGTTTGTAACTTTATTCTTT+TGG | - | chr7.4:26219514-26219533 | MS.gene058724:intron | 20.0% |
| ! | AAAAAAAAACGGTTCTTGAA+AGG | + | chr7.4:26219186-26219205 | None:intergenic | 25.0% |
| ! | GGTTTGTGATTAATTGAAAT+AGG | - | chr7.4:26219411-26219430 | MS.gene058724:intron | 25.0% |
| ! | GTCAATAATTCCAATAACAA+AGG | + | chr7.4:26219992-26220011 | None:intergenic | 25.0% |
| ! | GTTTGAAGGAAATTAGATTA+TGG | - | chr7.4:26219637-26219656 | MS.gene058724:intron | 25.0% |
| ! | TTAGATTATGGGTTTATGTT+TGG | - | chr7.4:26219649-26219668 | MS.gene058724:intron | 25.0% |
| ! | TTATGTGATTGTTTGTTTGA+AGG | - | chr7.4:26219623-26219642 | MS.gene058724:intron | 25.0% |
| ! | TTGCAAATTTATCATCTCAT+TGG | - | chr7.4:26220276-26220295 | MS.gene058724:intron | 25.0% |
| ! | TTTAGTTATTGTCATGTTTG+TGG | - | chr7.4:26219912-26219931 | MS.gene058724:intron | 25.0% |
| !! | GAAATTTTCCTTAAAAAGTC+CGG | + | chr7.4:26219562-26219581 | None:intergenic | 25.0% |
| !! | GTTTCTATTTTCTTAACTAG+TGG | - | chr7.4:26219819-26219838 | MS.gene058724:intron | 25.0% |
| !! | TGCTATTTGAATGTTGTTTA+AGG | - | chr7.4:26219390-26219409 | MS.gene058724:CDS | 25.0% |
| !!! | AACTTTATTCTTTTGGTGAT+TGG | - | chr7.4:26219521-26219540 | MS.gene058724:intron | 25.0% |
| ATAAATGCAATCTTCAACCA+TGG | + | chr7.4:26219083-26219102 | None:intergenic | 30.0% | |
| ATTATGGGTTTATGTTTGGT+TGG | - | chr7.4:26219653-26219672 | MS.gene058724:intron | 30.0% | |
| CGGATTTAACATTTATAGAG+AGG | - | chr7.4:26220481-26220500 | MS.gene058724:CDS | 30.0% | |
| GTTTGCAATGAACCAAAATA+GGG | + | chr7.4:26220236-26220255 | None:intergenic | 30.0% | |
| TAAGAACTCCAAATTCTCTT+CGG | + | chr7.4:26219277-26219296 | None:intergenic | 30.0% | |
| TGTTTGCAATGAACCAAAAT+AGG | + | chr7.4:26220237-26220256 | None:intergenic | 30.0% | |
| ! | AGAGAATTTGGAGTTCTTAA+AGG | - | chr7.4:26219278-26219297 | MS.gene058724:intron | 30.0% |
| ! | ATCTCGAAATTTTCATGAAG+TGG | - | chr7.4:26219739-26219758 | MS.gene058724:intron | 30.0% |
| ! | ATTATGAAGTTTGAAGCATG+TGG | - | chr7.4:26219938-26219957 | MS.gene058724:intron | 30.0% |
| ! | TATGTTTGGTTGGCTATTTA+GGG | - | chr7.4:26219663-26219682 | MS.gene058724:intron | 30.0% |
| ! | TCTGAAAGCACACATAATTA+AGG | + | chr7.4:26220201-26220220 | None:intergenic | 30.0% |
| ! | TTATGTTTGGTTGGCTATTT+AGG | - | chr7.4:26219662-26219681 | MS.gene058724:intron | 30.0% |
| ! | TTTTCATCTTTATGCAGCAT+AGG | - | chr7.4:26220358-26220377 | MS.gene058724:CDS | 30.0% |
| !!! | ATTTTGGTTCATTGCAAACA+AGG | - | chr7.4:26220237-26220256 | MS.gene058724:intron | 30.0% |
| !!! | CTTTTTCAATTTGGAATCGA+GGG | - | chr7.4:26219315-26219334 | MS.gene058724:intron | 30.0% |
| !!! | TCTTTTTCAATTTGGAATCG+AGG | - | chr7.4:26219314-26219333 | MS.gene058724:intron | 30.0% |
| AAACTAACATGATAGAGCGA+AGG | + | chr7.4:26219156-26219175 | None:intergenic | 35.0% | |
| AAGAACTCCAAATTCTCTTC+GGG | + | chr7.4:26219276-26219295 | None:intergenic | 35.0% | |
| AGTTATTGTCATGTTTGTGG+AGG | - | chr7.4:26219915-26219934 | MS.gene058724:intron | 35.0% | |
| CAAAGGGCAAATAACACATA+GGG | + | chr7.4:26220014-26220033 | None:intergenic | 35.0% | |
| GACTCTGTAAATTCTCATCT+TGG | + | chr7.4:26220590-26220609 | None:intergenic | 35.0% | |
| TCTTCAACCATGGAGAAATT+TGG | + | chr7.4:26219073-26219092 | None:intergenic | 35.0% | |
| TTTCATGAAGTGGTGAAAAG+TGG | - | chr7.4:26219749-26219768 | MS.gene058724:intron | 35.0% | |
| ! | AATGCTAAAAAGTGTGTCTG+AGG | - | chr7.4:26219698-26219717 | MS.gene058724:intron | 35.0% |
| ! | ATTTGCTGGTGTTAAATCCA+GGG | - | chr7.4:26220455-26220474 | MS.gene058724:intron | 35.0% |
| ! | ATTTTCTTAACTAGTGGCCA+TGG | - | chr7.4:26219825-26219844 | MS.gene058724:intron | 35.0% |
| ! | TGTGAGAAATCACCCTATTT+TGG | - | chr7.4:26220221-26220240 | MS.gene058724:intron | 35.0% |
| !!! | GAGGCTTTGAAAGTTTTAGT+TGG | - | chr7.4:26220073-26220092 | MS.gene058724:intron | 35.0% |
| AAGGGAAAACTGGAAGGTTT+AGG | + | chr7.4:26219118-26219137 | None:intergenic | 40.0% | |
| AAGGTTGAGGGTTTGAAGAA+AGG | + | chr7.4:26219137-26219156 | None:intergenic | 40.0% | |
| AATTTCCCTTTCCTTTACCG+AGG | + | chr7.4:26219865-26219884 | None:intergenic | 40.0% | |
| AGGTTGAGGGTTTGAAGAAA+GGG | + | chr7.4:26219136-26219155 | None:intergenic | 40.0% | |
| ATAATAGAATCCCTCAGAGC+AGG | + | chr7.4:26220052-26220071 | None:intergenic | 40.0% | |
| ATCTTTATGCAGCATAGGAC+AGG | - | chr7.4:26220363-26220382 | MS.gene058724:CDS | 40.0% | |
| ATGAGAATTTACAGAGTCCC+CGG | - | chr7.4:26220592-26220611 | MS.gene058724:CDS | 40.0% | |
| CGGTAAAGGAAAGGGAAATT+TGG | - | chr7.4:26219865-26219884 | MS.gene058724:intron | 40.0% | |
| GCAAAGGGCAAATAACACAT+AGG | + | chr7.4:26220015-26220034 | None:intergenic | 40.0% | |
| GCTTCAGAAAGTTGCAGAAT+TGG | - | chr7.4:26220400-26220419 | MS.gene058724:intron | 40.0% | |
| GGTTCATTGCAAACAAGGAA+AGG | - | chr7.4:26220242-26220261 | MS.gene058724:intron | 40.0% | |
| GGTTTGAAGAAAGGGAAAAC+TGG | + | chr7.4:26219128-26219147 | None:intergenic | 40.0% | |
| GTAAGGAAACTTCCTGCAAA+GGG | + | chr7.4:26220030-26220049 | None:intergenic | 40.0% | |
| TCAACCATGGAGAAATTTGG+TGG | + | chr7.4:26219070-26219089 | None:intergenic | 40.0% | |
| TCCAAATTCTCTTCGGGATA+GGG | + | chr7.4:26219270-26219289 | None:intergenic | 40.0% | |
| TCTGAGGGATTCTATTATGG+AGG | - | chr7.4:26220054-26220073 | MS.gene058724:intron | 40.0% | |
| TGAAGAAAGGGAAAACTGGA+AGG | + | chr7.4:26219124-26219143 | None:intergenic | 40.0% | |
| ! | ATTTGGAATCGAGGGCAAAA+CGG | - | chr7.4:26219323-26219342 | MS.gene058724:intron | 40.0% |
| ! | GTTTCGTCTGCCTTTGTTAT+TGG | - | chr7.4:26219979-26219998 | MS.gene058724:intron | 40.0% |
| ! | TTGGTTGGCTATTTAGGGTT+CGG | - | chr7.4:26219668-26219687 | MS.gene058724:intron | 40.0% |
| !! | ATGTGTTATTTGCCCTTTGC+AGG | - | chr7.4:26220015-26220034 | MS.gene058724:intron | 40.0% |
| !! | GATTTGCTGGTGTTAAATCC+AGG | - | chr7.4:26220454-26220473 | MS.gene058724:intron | 40.0% |
| !! | TGCTCTGAGGGATTCTATTA+TGG | - | chr7.4:26220051-26220070 | MS.gene058724:intron | 40.0% |
| !! | TTGGTCTTTTACCTTTGTGC+CGG | - | chr7.4:26219540-26219559 | MS.gene058724:intron | 40.0% |
| AAATGTTAAATCCGCTGCCC+TGG | + | chr7.4:26220475-26220494 | None:intergenic | 45.0% | |
| AAGTTTCCTTACCTGCTCTG+AGG | - | chr7.4:26220038-26220057 | MS.gene058724:intron | 45.0% | |
| ACATGATAGAGCGAAGGTTG+AGG | + | chr7.4:26219150-26219169 | None:intergenic | 45.0% | |
| ACCCTATCCCGAAGAGAATT+TGG | - | chr7.4:26219266-26219285 | MS.gene058724:intron | 45.0% | |
| AGCATCATCTACCAGTACCA+AGG | - | chr7.4:26220537-26220556 | MS.gene058724:CDS | 45.0% | |
| AGGCAGACGAAACCAAAACT+CGG | + | chr7.4:26219972-26219991 | None:intergenic | 45.0% | |
| AGGCATGCTAACATGTACCA+TGG | + | chr7.4:26219845-26219864 | None:intergenic | 45.0% | |
| AGTTTCCTTACCTGCTCTGA+GGG | - | chr7.4:26220039-26220058 | MS.gene058724:intron | 45.0% | |
| ATGTTAGCATGCCTCGGTAA+AGG | - | chr7.4:26219851-26219870 | MS.gene058724:intron | 45.0% | |
| CATGATAGAGCGAAGGTTGA+GGG | + | chr7.4:26219149-26219168 | None:intergenic | 45.0% | |
| CCTTAAAAAGTCCGGCACAA+AGG | + | chr7.4:26219554-26219573 | None:intergenic | 45.0% | |
| CTCCAAATTCTCTTCGGGAT+AGG | + | chr7.4:26219271-26219290 | None:intergenic | 45.0% | |
| GGTAAGGAAACTTCCTGCAA+AGG | + | chr7.4:26220031-26220050 | None:intergenic | 45.0% | |
| GGTTTGACCTCGTAAGTCTT+AGG | - | chr7.4:26220502-26220521 | MS.gene058724:CDS | 45.0% | |
| TCCTCCACCAAATTTCTCCA+TGG | - | chr7.4:26219063-26219082 | MS.gene058724:CDS | 45.0% | |
| TGGTACATGTTAGCATGCCT+CGG | - | chr7.4:26219845-26219864 | MS.gene058724:intron | 45.0% | |
| ! | ACCATGGAGAAATTTGGTGG+AGG | + | chr7.4:26219067-26219086 | None:intergenic | 45.0% |
| ! | CCTTTGTGCCGGACTTTTTA+AGG | - | chr7.4:26219551-26219570 | MS.gene058724:CDS | 45.0% |
| ! | GTGGATTCTTGACCGAGTTT+TGG | - | chr7.4:26219957-26219976 | MS.gene058724:intron | 45.0% |
| ! | TGGTTGGCTATTTAGGGTTC+GGG | - | chr7.4:26219669-26219688 | MS.gene058724:intron | 45.0% |
| !! | ACTTTCTGAAGCAGCCAACA+AGG | + | chr7.4:26220392-26220411 | None:intergenic | 45.0% |
| !! | TCTTTGAAGCACCTTGGTAC+TGG | + | chr7.4:26220551-26220570 | None:intergenic | 45.0% |
| !! | AATAATAAACAAAAAAAAAA+CGG | + | chr7.4:26219197-26219216 | None:intergenic | 5.0% |
| !!! | TTTATATATTTTTTTAAGTT+TGG | - | chr7.4:26220146-26220165 | MS.gene058724:intron | 5.0% |
| AGAATCCCTCAGAGCAGGTA+AGG | + | chr7.4:26220047-26220066 | None:intergenic | 50.0% | |
| AGCATGCCTCGGTAAAGGAA+AGG | - | chr7.4:26219856-26219875 | MS.gene058724:intron | 50.0% | |
| CATAGGACAGGTTGCCTTGT+TGG | - | chr7.4:26220375-26220394 | MS.gene058724:intron | 50.0% | |
| GACACTGCCTAAGACTTACG+AGG | + | chr7.4:26220512-26220531 | None:intergenic | 50.0% | |
| GCATGCCTCGGTAAAGGAAA+GGG | - | chr7.4:26219857-26219876 | MS.gene058724:intron | 50.0% | |
| GTGTTTGTCTTCCGCGTTTG+AGG | - | chr7.4:26220422-26220441 | MS.gene058724:intron | 50.0% | |
| TCGCTGATACTCCTCAAACG+CGG | + | chr7.4:26220436-26220455 | None:intergenic | 50.0% | |
| TTCTCTTCGGGATAGGGTTC+AGG | + | chr7.4:26219264-26219283 | None:intergenic | 50.0% | |
| ! | AAGGTGCTTCAAAGAAGCGC+AGG | - | chr7.4:26220556-26220575 | MS.gene058724:CDS | 50.0% |
| ! | GCTATTTAGGGTTCGGGATG+GGG | - | chr7.4:26219675-26219694 | MS.gene058724:intron | 50.0% |
| ! | GGCTATTTAGGGTTCGGGAT+GGG | - | chr7.4:26219674-26219693 | MS.gene058724:intron | 50.0% |
| ! | TGGCTATTTAGGGTTCGGGA+TGG | - | chr7.4:26219673-26219692 | MS.gene058724:intron | 50.0% |
| ! | TGGTGTTAAATCCAGGGCAG+CGG | - | chr7.4:26220461-26220480 | MS.gene058724:intron | 50.0% |
| !! | GAGGAGTATCAGCGATTTGC+TGG | - | chr7.4:26220441-26220460 | MS.gene058724:intron | 50.0% |
| !! | TGCGCTTCTTTGAAGCACCT+TGG | + | chr7.4:26220557-26220576 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 26219010 | 26220629 | 26219010 | ID=MS.gene058724 |
| chr7.4 | mRNA | 26219010 | 26220629 | 26219010 | ID=MS.gene058724.t1;Parent=MS.gene058724 |
| chr7.4 | exon | 26220472 | 26220629 | 26220472 | ID=MS.gene058724.t1.exon1;Parent=MS.gene058724.t1 |
| chr7.4 | CDS | 26220472 | 26220629 | 26220472 | ID=cds.MS.gene058724.t1;Parent=MS.gene058724.t1 |
| chr7.4 | exon | 26220295 | 26220388 | 26220295 | ID=MS.gene058724.t1.exon2;Parent=MS.gene058724.t1 |
| chr7.4 | CDS | 26220295 | 26220388 | 26220295 | ID=cds.MS.gene058724.t1;Parent=MS.gene058724.t1 |
| chr7.4 | exon | 26219545 | 26219602 | 26219545 | ID=MS.gene058724.t1.exon3;Parent=MS.gene058724.t1 |
| chr7.4 | CDS | 26219545 | 26219602 | 26219545 | ID=cds.MS.gene058724.t1;Parent=MS.gene058724.t1 |
| chr7.4 | exon | 26219376 | 26219419 | 26219376 | ID=MS.gene058724.t1.exon4;Parent=MS.gene058724.t1 |
| chr7.4 | CDS | 26219376 | 26219419 | 26219376 | ID=cds.MS.gene058724.t1;Parent=MS.gene058724.t1 |
| chr7.4 | exon | 26219010 | 26219264 | 26219010 | ID=MS.gene058724.t1.exon5;Parent=MS.gene058724.t1 |
| chr7.4 | CDS | 26219010 | 26219264 | 26219010 | ID=cds.MS.gene058724.t1;Parent=MS.gene058724.t1 |
| Gene Sequence |
| Protein sequence |
