AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059008

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059008.t1 MTR_1g069105 97.952 293 4 1 209 499 154 446 0.0 577
MS.gene059008.t1 MTR_7g099640 96.928 293 7 1 209 499 153 445 0.0 572
MS.gene059008.t1 MTR_7g099640 96.629 267 7 1 209 473 153 419 0.0 517
MS.gene059008.t1 MTR_1g069105 96.380 221 6 1 209 427 154 374 1.50e-147 428
MS.gene059008.t1 MTR_3g062510 57.509 273 116 0 208 480 126 398 1.29e-113 342
MS.gene059008.t1 MTR_4g094270 58.065 279 114 2 214 491 131 407 3.09e-110 333
MS.gene059008.t1 MTR_1g083330 55.678 273 121 0 218 490 144 416 3.15e-106 323
MS.gene059008.t1 MTR_4g033235 55.678 273 121 0 218 490 145 417 3.91e-106 323
MS.gene059008.t1 MTR_1g095660 51.736 288 125 4 222 499 99 382 4.02e-100 306
MS.gene059008.t1 MTR_3g117230 52.000 275 132 0 216 490 114 388 2.96e-95 294
MS.gene059008.t1 MTR_3g062510 61.009 218 85 0 208 425 126 343 7.31e-95 292
MS.gene059008.t1 MTR_3g112260 51.636 275 133 0 216 490 111 385 3.54e-94 291
MS.gene059008.t1 MTR_8g023550 49.458 277 121 3 225 499 149 408 4.29e-90 281
MS.gene059008.t1 MTR_7g101870 47.137 227 117 1 243 469 208 431 9.19e-61 213
MS.gene059008.t1 MTR_7g101870 39.357 249 151 0 235 483 473 721 6.84e-53 191
MS.gene059008.t1 MTR_1g063380 47.137 227 117 2 243 469 207 430 4.90e-60 211
MS.gene059008.t1 MTR_1g063380 41.453 234 137 0 235 468 472 705 1.01e-53 194
MS.gene059008.t1 MTR_7g010800 44.490 245 135 1 242 486 207 450 7.34e-60 209
MS.gene059008.t1 MTR_4g094662 40.816 245 144 1 242 486 230 473 3.99e-57 202
MS.gene059008.t1 MTR_2g438140 41.224 245 143 1 242 486 287 530 2.21e-56 199
MS.gene059008.t1 MTR_2g438140 41.224 245 143 1 242 486 227 470 2.43e-56 199
MS.gene059008.t1 MTR_7g088850 38.683 243 149 0 226 468 267 509 8.82e-55 192
MS.gene059008.t1 MTR_7g088850 26.496 234 158 4 264 485 36 267 4.46e-18 87.4
MS.gene059008.t1 MTR_4g064350 43.320 247 136 3 243 486 322 567 9.52e-55 196
MS.gene059008.t1 MTR_7g078570 39.649 285 158 5 215 486 156 439 2.21e-54 193
MS.gene059008.t1 MTR_2g095320 45.374 227 117 3 243 469 155 374 2.44e-54 194
MS.gene059008.t1 MTR_2g095320 38.261 230 129 2 239 468 419 635 7.42e-42 159
MS.gene059008.t1 MTR_8g099605 39.442 251 143 2 243 485 165 414 1.62e-53 191
MS.gene059008.t1 MTR_7g096060 42.972 249 134 4 243 486 242 487 4.49e-53 191
MS.gene059008.t1 MTR_2g095210 39.163 263 150 1 235 497 400 652 5.43e-53 191
MS.gene059008.t1 MTR_2g095210 51.899 79 38 0 243 321 209 287 5.10e-20 94.0
MS.gene059008.t1 MTR_6g059690 40.647 278 157 5 215 486 169 444 1.02e-52 189
MS.gene059008.t1 MTR_8g099605 39.442 251 143 2 243 485 406 655 1.08e-52 192
MS.gene059008.t1 MTR_3g115110 40.000 245 146 1 242 486 250 493 1.46e-52 189
MS.gene059008.t1 MTR_0376s0020 41.870 246 140 2 243 486 3 247 8.59e-52 184
MS.gene059008.t1 MTR_5g069780 42.063 252 142 3 236 484 308 558 1.44e-51 187
MS.gene059008.t1 MTR_3g462930 41.667 252 143 3 236 484 299 549 1.92e-50 184
MS.gene059008.t1 MTR_7g088980 37.786 262 161 1 226 485 121 382 1.76e-49 175
MS.gene059008.t1 MTR_7g088980 37.786 262 161 1 226 485 203 464 6.75e-49 175
MS.gene059008.t1 MTR_7g088980 29.452 146 97 3 320 461 28 171 1.19e-11 67.4
MS.gene059008.t1 MTR_7g088980 37.786 262 161 1 226 485 271 532 1.04e-48 176
MS.gene059008.t1 MTR_7g088980 29.545 220 149 3 246 461 22 239 4.51e-24 105
MS.gene059008.t1 MTR_3g104470 38.722 266 152 3 222 487 212 466 1.14e-48 178
MS.gene059008.t1 MTR_7g088980 37.786 262 161 1 226 485 297 558 1.35e-48 176
MS.gene059008.t1 MTR_7g088980 29.442 197 133 3 269 461 71 265 2.82e-20 94.4
MS.gene059008.t1 MTR_2g101290 39.683 252 148 2 243 491 417 667 7.52e-48 176
MS.gene059008.t1 MTR_7g088830 40.161 249 146 2 239 485 656 903 8.11e-48 177
MS.gene059008.t1 MTR_7g088830 34.579 214 124 5 280 482 432 640 1.02e-28 120
MS.gene059008.t1 MTR_2g101290 39.683 252 148 2 243 491 417 667 1.79e-47 176
MS.gene059008.t1 MTR_2g078630 37.607 234 137 3 240 467 65 295 9.37e-47 175
MS.gene059008.t1 MTR_7g089040 41.365 249 143 2 239 485 683 930 2.66e-46 173
MS.gene059008.t1 MTR_7g089040 32.636 239 152 4 240 474 385 618 1.06e-30 127
MS.gene059008.t1 MTR_2g078630 37.607 234 137 3 240 467 593 823 3.45e-46 173
MS.gene059008.t1 MTR_6g016600 40.486 247 141 3 243 487 319 561 3.85e-46 170
MS.gene059008.t1 MTR_1g028390 37.600 250 147 3 240 487 328 570 5.60e-46 171
MS.gene059008.t1 MTR_3g104480 38.934 244 145 2 244 487 225 464 1.17e-45 170
MS.gene059008.t1 MTR_4g067100 39.754 244 138 3 242 479 381 621 3.29e-45 170
MS.gene059008.t1 MTR_4g067100 39.754 244 138 3 242 479 381 621 3.32e-45 170
MS.gene059008.t1 MTR_5g075340 36.918 279 163 4 209 487 206 471 1.76e-44 167
MS.gene059008.t1 MTR_7g089290 39.062 256 143 8 231 477 629 880 1.90e-43 165
MS.gene059008.t1 MTR_7g089290 39.062 256 143 8 231 477 657 908 2.19e-43 165
MS.gene059008.t1 MTR_2g007010 38.938 226 136 2 243 467 240 464 1.87e-41 159
MS.gene059008.t1 MTR_2g007010 38.627 233 138 3 239 469 526 755 1.31e-39 153
MS.gene059008.t1 MTR_4g011810 36.538 260 151 5 235 485 236 490 3.94e-41 155
MS.gene059008.t1 MTR_1g088730 38.528 231 133 5 242 468 933 1158 5.50e-41 158
MS.gene059008.t1 MTR_1g101870 38.261 230 134 5 242 468 506 730 5.60e-40 154
MS.gene059008.t1 MTR_1g101870 34.286 280 166 7 202 468 508 782 7.33e-40 154
MS.gene059008.t1 MTR_7g075520 36.214 243 146 5 229 468 200 436 8.63e-40 150
MS.gene059008.t1 MTR_1g088750 33.904 292 176 8 184 468 834 1115 1.24e-39 154
MS.gene059008.t1 MTR_1g088750 33.904 292 176 8 184 468 883 1164 1.39e-39 154
MS.gene059008.t1 MTR_5g009840 36.087 230 139 4 242 468 517 741 1.62e-39 153
MS.gene059008.t1 MTR_1g099470 37.391 230 135 5 242 468 435 658 1.84e-39 152
MS.gene059008.t1 MTR_3g096000 38.723 235 133 5 242 468 297 528 2.48e-39 152
MS.gene059008.t1 MTR_8g099065 34.783 230 142 4 242 468 535 759 5.38e-39 151
MS.gene059008.t1 MTR_4g053350 35.294 272 144 11 235 499 121 367 1.30e-38 146
MS.gene059008.t1 MTR_4g053350 35.294 272 144 11 235 499 121 367 1.33e-38 146
MS.gene059008.t1 MTR_3g089100 36.889 225 133 5 242 462 932 1151 3.76e-38 149
MS.gene059008.t1 MTR_3g089100 36.889 225 133 5 242 462 898 1117 4.39e-38 149
MS.gene059008.t1 MTR_2g086160 33.955 268 153 9 235 499 126 372 4.45e-38 144
MS.gene059008.t1 MTR_3g089100 36.889 225 133 5 242 462 903 1122 4.48e-38 149
MS.gene059008.t1 MTR_4g096870 36.596 235 142 5 235 467 113 342 6.80e-38 143
MS.gene059008.t1 MTR_2g086160 36.564 227 134 7 235 458 126 345 6.96e-38 142
MS.gene059008.t1 MTR_3g092070 32.381 315 171 9 158 468 30 306 1.61e-37 142
MS.gene059008.t1 MTR_3g092070 32.381 315 171 9 158 468 30 306 3.59e-37 140
MS.gene059008.t1 MTR_1g099480 36.957 230 137 5 242 468 469 693 4.91e-37 145
MS.gene059008.t1 MTR_3g023900 34.457 267 159 6 235 489 230 492 7.83e-37 145
MS.gene059008.t1 MTR_3g023900 34.351 262 151 4 226 469 516 774 2.03e-34 138
MS.gene059008.t1 MTR_6g033740 36.522 230 137 5 242 468 501 724 9.37e-37 145
MS.gene059008.t1 MTR_6g023875 37.398 246 140 8 230 469 371 608 1.61e-35 140
MS.gene059008.t1 MTR_4g088885 33.922 283 158 7 231 486 213 493 1.49e-34 138
MS.gene059008.t1 MTR_3g023890 36.981 265 140 5 226 468 370 629 2.35e-34 137
MS.gene059008.t1 MTR_3g023890 34.468 235 135 7 253 477 106 331 1.26e-28 120
MS.gene059008.t1 MTR_5g075360 33.969 262 166 3 229 487 1 258 2.39e-34 135
MS.gene059008.t1 MTR_3g092080 31.429 315 174 9 158 468 33 309 2.99e-34 132
MS.gene059008.t1 MTR_5g075360 33.700 273 172 4 220 487 166 434 3.68e-34 136
MS.gene059008.t1 MTR_3g092080 30.599 317 174 9 158 468 33 309 4.09e-34 132
MS.gene059008.t1 MTR_5g075360 34.979 243 154 2 244 486 69 307 4.80e-34 135
MS.gene059008.t1 MTR_3g104490 35.772 246 128 4 243 486 209 426 5.20e-34 136
MS.gene059008.t1 MTR_5g075360 34.979 243 154 2 244 486 245 483 9.73e-34 135
MS.gene059008.t1 MTR_6g023855 36.287 237 140 7 237 468 242 472 7.08e-33 131
MS.gene059008.t1 MTR_5g074850 35.317 252 145 6 244 484 501 745 1.00e-32 133
MS.gene059008.t1 MTR_1g044600 31.752 274 139 5 223 486 140 375 1.06e-32 130
MS.gene059008.t1 MTR_8g056860 31.727 249 156 3 249 488 477 720 1.30e-31 129
MS.gene059008.t1 MTR_4g112600 71.795 78 21 1 245 321 4 81 1.73e-31 116
MS.gene059008.t1 MTR_8g469460 34.553 246 123 4 243 486 209 418 2.59e-31 128
MS.gene059008.t1 MTR_2g024440 35.931 231 127 7 242 461 215 435 3.10e-31 126
MS.gene059008.t1 MTR_2g024440 35.931 231 127 7 242 461 298 518 9.67e-31 125
MS.gene059008.t1 MTR_2g024440 35.931 231 127 7 242 461 297 517 1.06e-30 125
MS.gene059008.t1 MTR_7g088980 30.916 262 136 2 226 485 297 515 4.61e-30 123
MS.gene059008.t1 MTR_7g088980 29.442 197 133 3 269 461 71 265 2.01e-20 94.7
MS.gene059008.t1 MTR_7g088980 30.916 262 136 2 226 485 271 489 5.35e-30 123
MS.gene059008.t1 MTR_7g088980 29.545 220 149 3 246 461 22 239 3.34e-24 106
MS.gene059008.t1 MTR_1g099480 40.351 171 95 4 242 409 469 635 5.29e-29 121
MS.gene059008.t1 MTR_4g074920 30.519 308 172 11 168 468 605 877 1.13e-28 120
MS.gene059008.t1 MTR_8g099065 37.427 171 99 4 242 409 535 700 2.81e-28 119
MS.gene059008.t1 MTR_6g023865 32.171 258 139 8 235 468 152 397 9.04e-28 116
MS.gene059008.t1 MTR_1g080430 30.041 243 153 6 226 464 659 888 5.17e-23 103
MS.gene059008.t1 MTR_1g080430 30.041 243 153 6 226 464 659 888 6.81e-23 103
MS.gene059008.t1 MTR_4g083460 28.689 244 115 6 243 468 839 1041 5.52e-16 81.6
MS.gene059008.t1 MTR_6g023845 30.159 252 121 11 230 468 105 314 7.53e-16 79.7
MS.gene059008.t1 MTR_4g020770 55.556 72 29 2 72 142 77 146 1.25e-14 73.6
MS.gene059008.t1 MTR_8g076920 34.884 172 98 6 245 410 225 388 4.20e-14 75.1
MS.gene059008.t1 MTR_5g020980 34.375 160 92 5 256 410 229 380 1.22e-13 73.6
MS.gene059008.t1 MTR_5g048690 36.585 123 29 3 87 162 96 216 3.62e-13 69.3
MS.gene059008.t1 MTR_5g020530 35.374 147 73 6 277 415 387 519 4.41e-13 72.0
MS.gene059008.t1 MTR_2g076840 30.435 184 111 7 248 423 477 651 5.42e-12 68.9
MS.gene059008.t1 MTR_6g042290 32.692 156 85 6 268 411 236 383 4.08e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059008.t1 AT4G29040 95.563 293 11 1 209 499 151 443 0.0 568
MS.gene059008.t1 AT2G20140 95.222 293 12 1 209 499 151 443 0.0 563
MS.gene059008.t1 AT5G58290 58.242 273 114 0 208 480 119 391 9.85e-115 345
MS.gene059008.t1 AT5G19990 57.348 279 116 2 214 491 133 409 4.05e-108 328
MS.gene059008.t1 AT5G19990 57.348 279 116 2 214 491 133 409 4.05e-108 328
MS.gene059008.t1 AT5G19990 57.348 279 116 2 214 491 75 351 4.19e-108 326
MS.gene059008.t1 AT5G20000 57.348 279 116 2 214 491 133 409 5.14e-108 328
MS.gene059008.t1 AT1G09100 56.044 273 120 0 218 490 144 416 2.58e-106 323
MS.gene059008.t1 AT3G05530 55.311 273 122 0 218 490 145 417 6.80e-106 322
MS.gene059008.t1 AT1G53750 53.214 280 127 2 222 499 146 423 5.81e-103 315
MS.gene059008.t1 AT1G53780 52.500 280 129 2 222 499 318 595 2.17e-96 303
MS.gene059008.t1 AT1G53780 52.500 280 129 2 222 499 318 595 2.17e-96 303
MS.gene059008.t1 AT1G53780 52.500 280 129 2 222 499 339 616 2.27e-96 304
MS.gene059008.t1 AT1G53780 52.500 280 129 2 222 499 317 594 2.59e-96 303
MS.gene059008.t1 AT1G45000 52.000 275 132 0 216 490 111 385 7.79e-95 293
MS.gene059008.t1 AT5G43010 51.636 275 133 0 216 490 111 385 1.39e-94 293
MS.gene059008.t1 AT3G53230 47.137 227 117 1 243 469 207 430 2.34e-60 212
MS.gene059008.t1 AT3G53230 40.323 248 148 0 235 482 472 719 4.55e-54 195
MS.gene059008.t1 AT3G09840 47.137 227 117 2 243 469 206 429 7.00e-60 211
MS.gene059008.t1 AT3G09840 41.702 235 136 1 235 468 471 705 5.95e-51 186
MS.gene059008.t1 AT5G03340 47.137 227 117 2 243 469 206 429 9.55e-60 211
MS.gene059008.t1 AT5G03340 41.453 234 137 0 235 468 471 704 1.39e-52 191
MS.gene059008.t1 AT2G30950 41.633 245 142 1 242 486 225 468 1.15e-57 203
MS.gene059008.t1 AT2G30950 41.633 245 142 1 242 486 225 468 1.15e-57 203
MS.gene059008.t1 AT2G30950 41.633 245 142 1 242 486 225 468 1.15e-57 203
MS.gene059008.t1 AT2G30950 41.633 245 142 1 242 486 229 472 1.20e-57 203
MS.gene059008.t1 AT1G45000 53.293 167 78 0 216 382 111 277 4.92e-56 190
MS.gene059008.t1 AT1G06430 40.408 245 145 1 242 486 218 461 7.83e-56 198
MS.gene059008.t1 AT1G06430 40.408 245 145 1 242 486 218 461 7.83e-56 198
MS.gene059008.t1 AT1G06430 40.408 245 145 1 242 486 218 461 7.83e-56 198
MS.gene059008.t1 AT5G15250 43.673 245 137 1 242 486 222 465 1.20e-55 197
MS.gene059008.t1 AT1G07510 43.725 247 135 3 243 486 326 571 5.75e-55 197
MS.gene059008.t1 AT3G47060 43.952 248 131 4 242 484 323 567 4.08e-54 195
MS.gene059008.t1 AT5G58870 43.952 248 131 4 242 484 327 571 8.93e-54 194
MS.gene059008.t1 AT1G50250 40.000 245 146 1 242 486 260 503 8.25e-53 190
MS.gene059008.t1 AT5G15250 39.925 268 137 2 242 486 222 488 1.86e-52 186
MS.gene059008.t1 AT2G29080 43.496 246 136 2 243 486 321 565 1.65e-51 187
MS.gene059008.t1 AT5G42270 38.776 245 149 1 242 486 248 491 3.25e-51 186
MS.gene059008.t1 AT4G23940 39.044 251 144 2 243 485 429 678 3.79e-51 187
MS.gene059008.t1 AT2G26140 40.408 245 142 2 243 487 226 466 2.16e-48 178
MS.gene059008.t1 AT3G15120 39.485 233 132 3 240 466 725 954 2.31e-48 180
MS.gene059008.t1 AT3G15120 39.485 233 132 3 240 466 715 944 2.33e-48 180
MS.gene059008.t1 AT2G03670 39.827 231 138 1 239 468 281 511 7.25e-48 175
MS.gene059008.t1 AT2G03670 32.661 248 160 3 244 485 22 268 2.63e-35 139
MS.gene059008.t1 AT3G56690 37.786 262 156 3 212 468 688 947 9.41e-48 177
MS.gene059008.t1 AT3G56690 42.640 197 107 3 273 467 413 605 4.05e-42 161
MS.gene059008.t1 AT1G05910 40.323 248 139 3 242 483 379 623 1.61e-47 177
MS.gene059008.t1 AT3G16290 39.749 239 143 1 243 481 409 646 2.12e-46 173
MS.gene059008.t1 AT5G53170 37.200 250 148 3 240 487 358 600 3.10e-46 172
MS.gene059008.t1 AT3G02450 40.000 265 151 4 237 497 327 587 4.92e-45 167
MS.gene059008.t1 AT2G45500 35.341 249 150 6 224 468 63 304 5.61e-43 156
MS.gene059008.t1 AT2G45500 35.341 249 150 6 224 468 63 304 5.61e-43 156
MS.gene059008.t1 AT1G03000 37.743 257 153 6 231 483 645 898 3.00e-42 161
MS.gene059008.t1 AT2G45500 34.783 253 154 6 220 468 192 437 9.67e-42 155
MS.gene059008.t1 AT2G45500 34.783 253 154 6 220 468 196 441 1.27e-41 155
MS.gene059008.t1 AT2G45500 34.783 253 154 6 220 468 202 447 1.40e-41 155
MS.gene059008.t1 AT4G02480 36.396 283 156 8 197 468 917 1186 1.40e-41 159
MS.gene059008.t1 AT1G02890 37.662 231 135 5 242 468 942 1167 5.03e-41 158
MS.gene059008.t1 AT1G80350 35.769 260 153 5 235 485 230 484 1.28e-40 153
MS.gene059008.t1 AT5G53540 37.826 230 133 5 243 468 86 309 2.55e-40 150
MS.gene059008.t1 AT4G28000 37.826 230 134 6 242 468 518 741 4.83e-40 154
MS.gene059008.t1 AT4G28000 37.826 230 134 6 242 468 518 741 4.86e-40 154
MS.gene059008.t1 AT4G28000 37.826 230 134 6 242 468 516 739 4.88e-40 154
MS.gene059008.t1 AT5G08470 36.726 226 140 1 243 468 843 1065 7.43e-40 154
MS.gene059008.t1 AT5G08470 36.726 226 140 1 243 468 834 1056 8.91e-40 154
MS.gene059008.t1 AT4G27680 32.595 316 169 10 158 468 30 306 4.91e-39 146
MS.gene059008.t1 AT2G34560 36.283 226 140 3 243 467 102 324 2.16e-38 144
MS.gene059008.t1 AT2G34560 36.283 226 140 3 243 467 111 333 3.06e-38 144
MS.gene059008.t1 AT1G64110 35.652 230 140 5 242 468 519 743 3.27e-38 149
MS.gene059008.t1 AT1G64110 35.652 230 140 5 242 468 519 743 3.27e-38 149
MS.gene059008.t1 AT1G64110 35.652 230 140 5 242 468 514 738 3.46e-38 149
MS.gene059008.t1 AT1G64110 35.652 230 140 5 242 468 517 741 3.82e-38 149
MS.gene059008.t1 AT1G64110 35.652 230 140 5 242 468 517 741 3.82e-38 149
MS.gene059008.t1 AT5G64580 37.447 235 136 6 242 468 314 545 5.39e-38 149
MS.gene059008.t1 AT3G01610 34.959 246 145 3 233 467 222 463 1.19e-37 147
MS.gene059008.t1 AT3G01610 35.931 231 143 3 239 468 523 749 6.74e-33 133
MS.gene059008.t1 AT5G52882 36.087 230 138 5 242 468 515 738 1.29e-37 147
MS.gene059008.t1 AT3G01610 34.959 246 145 3 233 467 222 463 1.44e-37 147
MS.gene059008.t1 AT3G01610 35.931 231 143 3 239 468 523 749 7.77e-33 133
MS.gene059008.t1 AT1G50140 37.500 232 132 6 243 468 713 937 2.92e-37 147
MS.gene059008.t1 AT1G50140 37.500 232 132 6 243 468 713 937 2.92e-37 147
MS.gene059008.t1 AT1G50140 37.500 232 132 6 243 468 713 937 2.92e-37 147
MS.gene059008.t1 AT1G50140 37.500 232 132 6 243 468 691 915 2.93e-37 146
MS.gene059008.t1 AT1G50140 37.500 232 132 6 243 468 691 915 2.93e-37 146
MS.gene059008.t1 AT2G03670 32.661 248 160 3 244 485 22 268 2.83e-36 139
MS.gene059008.t1 AT2G03670 38.028 142 87 1 239 379 281 422 8.88e-22 98.2
MS.gene059008.t1 AT2G27600 34.686 271 147 11 235 499 123 369 6.34e-36 139
MS.gene059008.t1 AT4G24860 35.065 231 141 5 242 468 816 1041 9.46e-36 142
MS.gene059008.t1 AT4G24860 35.065 231 141 5 242 468 818 1043 1.03e-35 142
MS.gene059008.t1 AT4G24860 35.065 231 141 5 242 468 791 1016 1.10e-35 142
MS.gene059008.t1 AT4G24860 35.065 231 141 5 242 468 814 1039 1.15e-35 142
MS.gene059008.t1 AT3G19740 36.087 230 138 5 243 468 703 927 1.41e-35 141
MS.gene059008.t1 AT3G27120 36.585 246 140 9 230 468 389 625 1.18e-34 138
MS.gene059008.t1 AT1G79560 32.653 245 151 3 249 484 497 736 2.66e-32 132
MS.gene059008.t1 AT4G04910 33.333 279 155 9 231 481 203 478 2.75e-32 131
MS.gene059008.t1 AT1G79560 32.653 245 151 3 249 484 497 736 3.70e-32 131
MS.gene059008.t1 AT1G79560 32.129 249 155 3 249 488 497 740 4.42e-32 131
MS.gene059008.t1 AT4G04180 35.808 229 130 6 242 461 317 537 9.20e-32 129
MS.gene059008.t1 AT4G04180 35.808 229 130 6 242 461 312 532 1.07e-31 129
MS.gene059008.t1 AT1G62130 32.143 224 133 6 242 462 751 958 7.34e-28 118
MS.gene059008.t1 AT1G62130 32.143 224 133 6 242 462 744 951 9.10e-28 118
MS.gene059008.t1 AT1G02890 33.333 231 117 6 242 468 942 1139 1.81e-26 114
MS.gene059008.t1 AT3G04340 31.863 204 134 3 226 425 763 965 5.75e-23 103
MS.gene059008.t1 AT5G08470 35.135 148 93 1 243 390 843 987 5.59e-20 94.4
MS.gene059008.t1 AT2G18193 34.568 162 93 6 254 410 219 372 8.87e-13 70.9
MS.gene059008.t1 AT2G18330 35.461 141 81 6 277 415 384 516 2.27e-11 66.6

Find 118 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTATATAATGTGGATATTT+TGG 0.154578 1.2:-51864203 None:intergenic
TACACCTATTGGATGGGTTT+TGG 0.246800 1.2:+51864121 MS.gene059008:CDS
TTGAATCAAAACCATCTAAT+TGG 0.246918 1.2:-51867376 None:intergenic
AGCAAGGTCTTTCCTGTTCC+AGG 0.251915 1.2:-51866342 None:intergenic
AAAAGTTCCCTCACAAGTTT+TGG 0.253191 1.2:-51867090 None:intergenic
TGGTTTAGATGCACAGATTC+AGG 0.261838 1.2:+51866224 MS.gene059008:CDS
TCTATCAAAATTGAAGAAAA+TGG 0.301142 1.2:+51864541 MS.gene059008:CDS
TGCTCATACCGGTAATTCTA+TGG 0.331734 1.2:+51864082 MS.gene059008:CDS
TTTCACATATATAGTCCTTC+TGG 0.335810 1.2:-51868824 None:intergenic
CTCTCTCACTCTACACCTAT+TGG 0.336200 1.2:+51864110 MS.gene059008:CDS
AGGAGATGTAAAAGTGATTC+TGG 0.336312 1.2:+51867400 MS.gene059008:CDS
AAGCTGGCTTACTTGCTCTA+AGG 0.338560 1.2:+51867763 MS.gene059008:CDS
TATCAGGTTCTTTCGGTTGT+TGG 0.341432 1.2:+51866120 MS.gene059008:intron
AAGACCACGCGATTCAATTC+CGG 0.348179 1.2:-51864435 None:intergenic
CACTGCAGAGACTCTAAATT+AGG 0.349529 1.2:-51864575 None:intergenic
CAATCGTCTGTCCCGTGTTC+CGG 0.354258 1.2:-51864409 None:intergenic
CCTGAACTATATGAAGATAT+TGG 0.377536 1.2:+51866282 MS.gene059008:CDS
GAAAGTCGAGAAGGCTCCTT+TGG 0.379073 1.2:+51866182 MS.gene059008:CDS
TCCTTTGCCTTCTTAAAGTC+AGG 0.394203 1.2:-51868770 None:intergenic
CTTGTCTGCCAACGAGTATA+AGG 0.399479 1.2:+51864010 MS.gene059008:CDS
ATTCTCTGGAGCTGATATAA+AGG 0.399716 1.2:+51867728 MS.gene059008:CDS
AAGCGACGATGGAGGAGTTC+AGG 0.403385 1.2:-51864506 None:intergenic
CCAATATCTTCATATAGTTC+AGG 0.405223 1.2:-51866282 None:intergenic
GCAGTGTGAGTCTTGTCAAT+TGG 0.414324 1.2:+51864592 MS.gene059008:CDS
CTCACTCTACACCTATTGGA+TGG 0.417954 1.2:+51864114 MS.gene059008:CDS
CATATAGTTCAGGATGTGTA+AGG 0.423583 1.2:-51866272 None:intergenic
GAGACAAACCATAGAATTAC+CGG 0.439253 1.2:-51864090 None:intergenic
GTACTTACTGTGAGAGAGAT+AGG 0.440211 1.2:+51863885 MS.gene059008:CDS
GCTACATTCTTGCGTGTAGT+AGG 0.441990 1.2:+51867033 MS.gene059008:CDS
GAACTCCTCCATCGTCGCTT+AGG 0.448097 1.2:+51864509 MS.gene059008:CDS
AATGGTCGAGGACGTGGTAG+AGG 0.456529 1.2:+51863842 None:intergenic
GAATCCAAAACCCATCCAAT+AGG 0.458742 1.2:-51864125 None:intergenic
CGACCAGGTCGTAGCAAAGC+TGG 0.459189 1.2:-51867449 None:intergenic
GAGTTGCTGAACCAATTAGA+TGG 0.459214 1.2:+51867365 MS.gene059008:CDS
ATGACCAAGGATGAATTCTC+TGG 0.461397 1.2:+51867714 MS.gene059008:CDS
TCTCTCACAGTAAGTACAAC+GGG 0.462045 1.2:-51863879 None:intergenic
GTGATGTTTAAGAAGAAAGA+AGG 0.471189 1.2:+51868797 MS.gene059008:CDS
AGTTCAAACCTTTGCAAGCA+AGG 0.479869 1.2:-51866358 None:intergenic
ACGGGACAGACGATTGGAAC+CGG 0.484028 1.2:+51864416 MS.gene059008:CDS
ATCAAGACTTTCAATTCTGT+TGG 0.488586 1.2:-51867426 None:intergenic
TTATATGGAGAACCTGGAAC+AGG 0.489995 1.2:+51866330 MS.gene059008:CDS
TGAATTGATACAAAAGTACT+TGG 0.490609 1.2:+51867059 MS.gene059008:CDS
CGTGGCAATGGTCGAGGACG+TGG 0.495173 1.2:+51863836 None:intergenic
CAGTGTGAGTCTTGTCAATT+GGG 0.500355 1.2:+51864593 MS.gene059008:CDS
TATTGGTATCAAGCCTCCTA+AGG 0.501403 1.2:+51866299 MS.gene059008:CDS
AAATTGAAGAAAATGGTGTC+TGG 0.501407 1.2:+51864548 MS.gene059008:CDS
TCACTCTACACCTATTGGAT+GGG 0.501677 1.2:+51864115 MS.gene059008:CDS
GCCTTTGACTCAGTCTGTAG+AGG 0.502285 1.2:-51863972 None:intergenic
GAATCTTATGCTGACATTGG+TGG 0.503180 1.2:+51866204 MS.gene059008:CDS
ATGGTCGAGGACGTGGTAGA+GGG 0.508592 1.2:+51863843 MS.gene059008:CDS
TACAACACATGTTGTAGAAG+TGG 0.508624 1.2:-51864474 None:intergenic
TACGACCTGGTCGTATCGAC+AGG 0.509099 1.2:+51867459 MS.gene059008:CDS
GATCAGTGCTACAATTTACA+TGG 0.509797 1.2:+51863917 MS.gene059008:CDS
CGTGGACGTGGCAATGGTCG+AGG 0.512426 1.2:+51863830 None:intergenic
AAGGCAATATGTACTGAAGC+TGG 0.512575 1.2:+51867747 MS.gene059008:CDS
TTGGAATCTTATGCTGACAT+TGG 0.515821 1.2:+51866201 MS.gene059008:CDS
CGGAACACGGGACAGACGAT+TGG 0.518135 1.2:+51864410 MS.gene059008:CDS
CTTATACTCGTTGGCAGACA+AGG 0.520756 1.2:-51864009 None:intergenic
GGTTCTAAAGTTGAAGCTAC+TGG 0.521511 1.2:+51864236 MS.gene059008:CDS
CAAATACTCCTTATACTCGT+TGG 0.526598 1.2:-51864018 None:intergenic
TTCTTCCAAGTTGACATCAT+CGG 0.531489 1.2:-51867685 None:intergenic
AGCTCCAGAGAATTCATCCT+TGG 0.532081 1.2:-51867718 None:intergenic
ACTTTCATGACCGATACCAT+TGG 0.536769 1.2:-51866165 None:intergenic
TAAGGAGTATTTGCAGCTAA+AGG 0.537357 1.2:+51864028 MS.gene059008:CDS
TTGATACAGGACCGGAACAC+GGG 0.537835 1.2:+51864398 MS.gene059008:intron
TCATCAATGAAAACAATAGC+AGG 0.540016 1.2:-51867135 None:intergenic
TCAGCTACTGTTGCTCATAC+CGG 0.542652 1.2:+51864071 MS.gene059008:CDS
TCTAAGGGAACGCCGAATGA+AGG 0.547948 1.2:+51867779 MS.gene059008:CDS
ATTGATGAAATTGATGCAGT+CGG 0.549849 1.2:+51867150 MS.gene059008:CDS
AGGAAAGACCTTGCTTGCAA+AGG 0.553721 1.2:+51866350 MS.gene059008:CDS
TGCAGGTATGATGCTCACTC+AGG 0.553816 1.2:+51867311 MS.gene059008:intron
ATCTTCCTGTCGATACGACC+AGG 0.559772 1.2:-51867464 None:intergenic
CTACAGACTGAGTCAAAGGC+TGG 0.560293 1.2:+51863975 MS.gene059008:CDS
GACTCATCCTGACTTTAAGA+AGG 0.562675 1.2:+51868763 MS.gene059008:CDS
ACCTCTACAGACTGAGTCAA+AGG 0.566463 1.2:+51863971 MS.gene059008:CDS
TCCTGACTTTAAGAAGGCAA+AGG 0.566993 1.2:+51868769 MS.gene059008:CDS
TGAAGTTGATCCAATGGTAT+CGG 0.567280 1.2:+51866155 MS.gene059008:CDS
GGTCGAGGACGTGGTAGAGG+GGG 0.568422 1.2:+51863845 MS.gene059008:CDS
GTCATATTATATGGAGAACC+TGG 0.570307 1.2:+51866324 MS.gene059008:CDS
GATCAACTTCATCTTGCAGA+AGG 0.572347 1.2:-51866143 None:intergenic
GATCCAGCTTTGCTACGACC+TGG 0.573418 1.2:+51867446 MS.gene059008:CDS
AAAGTTGAAGCTACTGGTGT+CGG 0.576733 1.2:+51864242 MS.gene059008:CDS
GCAAGATGAAGTTGATCCAA+TGG 0.579268 1.2:+51866149 MS.gene059008:CDS
TCCGCAACAGTTATATAATG+TGG 0.581003 1.2:-51864212 None:intergenic
GGAAGAATTTGTTATGACCA+AGG 0.583550 1.2:+51867701 MS.gene059008:CDS
ACAGATTCAGGAAATTAAAG+AGG 0.584322 1.2:+51866236 MS.gene059008:CDS
TGGTCGAGGACGTGGTAGAG+GGG 0.585864 1.2:+51863844 MS.gene059008:CDS
ATTAGCCGATGATGTCAACT+TGG 0.586264 1.2:+51867680 MS.gene059008:CDS
GTGGAGAACGTGAAATTCAA+AGG 0.587888 1.2:+51867333 MS.gene059008:CDS
AGCTGGCTTACTTGCTCTAA+GGG 0.591923 1.2:+51867764 MS.gene059008:CDS
ATATAGTTCAGGATGTGTAA+GGG 0.593502 1.2:-51866271 None:intergenic
ATACAAAAGTACTTGGGAGA+TGG 0.593824 1.2:+51867066 MS.gene059008:CDS
TGTAGAGGTTTGAGCAACGT+TGG 0.599996 1.2:-51863957 None:intergenic
CATTATATAACTGTTGCGGA+TGG 0.603493 1.2:+51864215 MS.gene059008:CDS
ATTGGTATCAAGCCTCCTAA+GGG 0.604521 1.2:+51866300 MS.gene059008:CDS
TTGGATGACCTAAGCGACGA+TGG 0.608398 1.2:-51864517 None:intergenic
AAGAAAGAAGGAGTGCCAGA+AGG 0.608420 1.2:+51868809 MS.gene059008:CDS
AGATGGTCCAAAACTTGTGA+GGG 0.610145 1.2:+51867083 MS.gene059008:CDS
TATAGTTCAGGATGTGTAAG+GGG 0.615490 1.2:-51866270 None:intergenic
TTTGATACAGGACCGGAACA+CGG 0.616085 1.2:+51864397 MS.gene059008:intron
CTCTCTCACAGTAAGTACAA+CGG 0.621944 1.2:-51863880 None:intergenic
TCCACATTATATAACTGTTG+CGG 0.624265 1.2:+51864211 MS.gene059008:CDS
GATGACCTAAGCGACGATGG+AGG 0.629095 1.2:-51864514 None:intergenic
TTGTAGAAGTGGAAGGATCG+AGG 0.630359 1.2:-51864463 None:intergenic
ATCGGTCATGAAAGTCGAGA+AGG 0.640029 1.2:+51866173 MS.gene059008:CDS
ACACATGTTGTAGAAGTGGA+AGG 0.644883 1.2:-51864470 None:intergenic
AGGTATGATGCTCACTCAGG+TGG 0.648079 1.2:+51867314 MS.gene059008:intron
GAGATGGTCCAAAACTTGTG+AGG 0.650908 1.2:+51867082 MS.gene059008:CDS
TGAGAGAGATAGGCACACTC+AGG 0.656995 1.2:+51863895 MS.gene059008:CDS
TTGATGCAGTCGGTACAAAG+AGG 0.660453 1.2:+51867160 MS.gene059008:CDS
AATAGCAGGAGAAAGATCAT+CGG 0.664706 1.2:-51867121 None:intergenic
ATGTCAGCATAAGATTCCAA+AGG 0.668551 1.2:-51866198 None:intergenic
TGGTATCAAGCCTCCTAAGG+GGG 0.672848 1.2:+51866302 MS.gene059008:CDS
GAATTGATACAAAAGTACTT+GGG 0.673200 1.2:+51867060 MS.gene059008:CDS
AAATTAAGATACACACATCG+AGG 0.673260 1.2:+51867652 MS.gene059008:intron
GGTATGAGCAACAGTAGCTG+AGG 0.682571 1.2:-51864069 None:intergenic
GGAACCGGAATTGAATCGCG+TGG 0.688113 1.2:+51864431 MS.gene059008:CDS
TTGGTATCAAGCCTCCTAAG+GGG 0.698104 1.2:+51866301 MS.gene059008:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCATCTTTTAATATTATTA+GGG + chr1.2:51868238-51868257 MS.gene059008:intron 10.0%
!!! TTTCATCTTTTAATATTATT+AGG + chr1.2:51868237-51868256 MS.gene059008:intron 10.0%
!! AATAGTAAGATATCATAAAT+TGG - chr1.2:51868722-51868741 None:intergenic 15.0%
!! AATATGTTCATTATATTATG+TGG + chr1.2:51864922-51864941 MS.gene059008:intron 15.0%
!! ATATGTTCATTATATTATGT+GGG + chr1.2:51864923-51864942 MS.gene059008:intron 15.0%
!! ATTTATATACAGCATTTATT+GGG + chr1.2:51868027-51868046 MS.gene059008:intron 15.0%
!! GAAATATTCTTTATAGAATT+AGG + chr1.2:51866036-51866055 MS.gene059008:intron 15.0%
!! GAATATACAGTTATATATAT+AGG + chr1.2:51864948-51864967 MS.gene059008:intron 15.0%
!! TAAAAAAACATAAGATTGAT+AGG - chr1.2:51868645-51868664 None:intergenic 15.0%
!! TACAATCAATACAATAAATA+AGG + chr1.2:51865017-51865036 MS.gene059008:intron 15.0%
!! TATTTATATACAGCATTTAT+TGG + chr1.2:51868026-51868045 MS.gene059008:intron 15.0%
!!! ACATCATTTTTTTTCATTTT+TGG + chr1.2:51866604-51866623 MS.gene059008:intron 15.0%
!!! ATAAATTTTTAACCTTCATT+CGG - chr1.2:51867794-51867813 None:intergenic 15.0%
!!! ATCAATCTTATGTTTTTTTA+AGG + chr1.2:51868645-51868664 MS.gene059008:intron 15.0%
!!! ATTATGATTGATTTTTTATC+AGG + chr1.2:51866104-51866123 MS.gene059008:intron 15.0%
!! ATTTGATACCATACTATAAT+TGG + chr1.2:51865959-51865978 MS.gene059008:intron 20.0%
!! CAAATTATACAAACAATAAC+AGG - chr1.2:51866067-51866086 None:intergenic 20.0%
!! CTGTATATAAATATGAAACT+AGG - chr1.2:51868019-51868038 None:intergenic 20.0%
!! CTTATAGAAATCAAATTGAA+GGG - chr1.2:51864326-51864345 None:intergenic 20.0%
!! GAAAAACAATATAAATTCCA+CGG - chr1.2:51866422-51866441 None:intergenic 20.0%
!! GAAACATTCTTTATAGAATT+AGG + chr1.2:51865513-51865532 MS.gene059008:intron 20.0%
!! TCTATCAAAATTGAAGAAAA+TGG + chr1.2:51864541-51864560 MS.gene059008:CDS 20.0%
!! TCTTTAAACAATTACTAAGT+TGG + chr1.2:51866904-51866923 MS.gene059008:intron 20.0%
!!! ATCTTTTAATATTATTAGGG+TGG + chr1.2:51868241-51868260 MS.gene059008:intron 20.0%
!!! ATTACTTTTATATCTTGTTC+AGG + chr1.2:51868739-51868758 MS.gene059008:intron 20.0%
!!! ATTGAGATCGTTTTATAAAA+GGG - chr1.2:51865329-51865348 None:intergenic 20.0%
!!! GTTATATAATGTGGATATTT+TGG - chr1.2:51864206-51864225 None:intergenic 20.0%
!!! TAACTATAGTTACATTTTGT+AGG + chr1.2:51868560-51868579 MS.gene059008:intron 20.0%
!!! TATTGAGATCGTTTTATAAA+AGG - chr1.2:51865330-51865349 None:intergenic 20.0%
!!! TTGAAAATTAGGAAAAGTTT+TGG + chr1.2:51866011-51866030 MS.gene059008:intron 20.0%
!!! TTTTTTACAATGTTACTTTC+TGG + chr1.2:51866522-51866541 MS.gene059008:intron 20.0%
! AACAACATTAATTCATCGAA+AGG - chr1.2:51865461-51865480 None:intergenic 25.0%
! AATCAAATTGAAGGGAAAAT+TGG - chr1.2:51864318-51864337 None:intergenic 25.0%
! ACATTCTTTATAGAATTAGG+AGG + chr1.2:51865516-51865535 MS.gene059008:intron 25.0%
! ACCCAAATATATTATGCTAA+AGG + chr1.2:51867884-51867903 MS.gene059008:intron 25.0%
! AGTAAGATATCATAAATTGG+AGG - chr1.2:51868719-51868738 None:intergenic 25.0%
! ATAAGATTGATAGGTAAAGA+TGG - chr1.2:51868636-51868655 None:intergenic 25.0%
! ATACAGTTATATATATAGGC+AGG + chr1.2:51864952-51864971 MS.gene059008:intron 25.0%
! ATACCATACTATAATTGGTT+TGG + chr1.2:51865964-51865983 MS.gene059008:intron 25.0%
! ATCAAATTGAAGGGAAAATT+GGG - chr1.2:51864317-51864336 None:intergenic 25.0%
! CCCAAATATATTATGCTAAA+GGG + chr1.2:51867885-51867904 MS.gene059008:intron 25.0%
! CCCTTTAGCATAATATATTT+GGG - chr1.2:51867888-51867907 None:intergenic 25.0%
! CCTATATGAATCCTAAAATT+GGG - chr1.2:51867200-51867219 None:intergenic 25.0%
! CTATATGAATCCTAAAATTG+GGG - chr1.2:51867199-51867218 None:intergenic 25.0%
! GATTCACTGAAGTAAAAAAT+TGG - chr1.2:51868608-51868627 None:intergenic 25.0%
! GCTTATAGAAATCAAATTGA+AGG - chr1.2:51864327-51864346 None:intergenic 25.0%
! TAAGATTGATAGGTAAAGAT+GGG - chr1.2:51868635-51868654 None:intergenic 25.0%
! TATATGAATCCTAAAATTGG+GGG - chr1.2:51867198-51867217 None:intergenic 25.0%
! TTCTATAAAGAATGTTTCAG+CGG - chr1.2:51865511-51865530 None:intergenic 25.0%
! TTGAATCAAAACCATCTAAT+TGG - chr1.2:51867379-51867398 None:intergenic 25.0%
!! AATTCCTTATGTACTGTTTT+GGG + chr1.2:51866673-51866692 MS.gene059008:intron 25.0%
!! AATTGAAATTGTGAGTTGAA+GGG - chr1.2:51865791-51865810 None:intergenic 25.0%
!! ACTATAGTTAGACAAAGTTT+TGG - chr1.2:51868550-51868569 None:intergenic 25.0%
!! ATTAATCTTCCCTATTGATT+GGG - chr1.2:51864994-51865013 None:intergenic 25.0%
!! CTATAGTTAGACAAAGTTTT+GGG - chr1.2:51868549-51868568 None:intergenic 25.0%
!! GATATATACTGTATTGATAC+TGG + chr1.2:51866725-51866744 MS.gene059008:intron 25.0%
!! GATTTGTCTGTATTATCTTT+TGG + chr1.2:51868667-51868686 MS.gene059008:intron 25.0%
!! TACCATACTATAATTGGTTT+GGG + chr1.2:51865965-51865984 MS.gene059008:intron 25.0%
!! TATAGTTAGACAAAGTTTTG+GGG - chr1.2:51868548-51868567 None:intergenic 25.0%
!! TTGTAGTTGTTTGAAATGAA+GGG - chr1.2:51868188-51868207 None:intergenic 25.0%
!!! AACAAAGCATTTTTACAGAA+AGG + chr1.2:51868135-51868154 MS.gene059008:intron 25.0%
!!! AATTTTAGGATTCATATAGG+CGG + chr1.2:51867200-51867219 MS.gene059008:intron 25.0%
!!! GAATTGATACAAAAGTACTT+GGG + chr1.2:51867060-51867079 MS.gene059008:CDS 25.0%
!!! GATTTTTTATCAGGTTCTTT+CGG + chr1.2:51866113-51866132 MS.gene059008:intron 25.0%
!!! GTTATGGTGCTAATTTTTTT+TGG + chr1.2:51867925-51867944 MS.gene059008:intron 25.0%
!!! TGAATTGATACAAAAGTACT+TGG + chr1.2:51867059-51867078 MS.gene059008:CDS 25.0%
!!! TTCTTCAATTTTGATAGACT+TGG - chr1.2:51864539-51864558 None:intergenic 25.0%
AAACGATCTCAATAGTGAAT+TGG + chr1.2:51865336-51865355 MS.gene059008:intron 30.0%
AAAGGTTATGGCACAATTTA+AGG - chr1.2:51864363-51864382 None:intergenic 30.0%
AAATTAAGATACACACATCG+AGG + chr1.2:51867652-51867671 MS.gene059008:intron 30.0%
AAATTGAAGAAAATGGTGTC+TGG + chr1.2:51864548-51864567 MS.gene059008:CDS 30.0%
AAGCTCATTACTTCTTCAAA+AGG - chr1.2:51865938-51865957 None:intergenic 30.0%
ACAGATTCAGGAAATTAAAG+AGG + chr1.2:51866236-51866255 MS.gene059008:CDS 30.0%
ATAAGTTGCTTATCCAAACA+AGG + chr1.2:51865672-51865691 MS.gene059008:intron 30.0%
ATATAGTTCAGGATGTGTAA+GGG - chr1.2:51866274-51866293 None:intergenic 30.0%
ATATTTCTTTGCTCATACGA+TGG - chr1.2:51865432-51865451 None:intergenic 30.0%
ATCAAGACTTTCAATTCTGT+TGG - chr1.2:51867429-51867448 None:intergenic 30.0%
ATGATTTCTCAAGATGTACT+TGG + chr1.2:51864753-51864772 MS.gene059008:intron 30.0%
ATTATCAGATCTGTAGAGTT+TGG + chr1.2:51866474-51866493 MS.gene059008:intron 30.0%
ATTGATGAAATTGATGCAGT+CGG + chr1.2:51867150-51867169 MS.gene059008:CDS 30.0%
CAAAAAGGAATCAGAAGTAA+AGG - chr1.2:51864381-51864400 None:intergenic 30.0%
CAAAACTAATCATGTTTACC+TGG - chr1.2:51867532-51867551 None:intergenic 30.0%
CAGTTAAACTCATGAATGTA+AGG - chr1.2:51867280-51867299 None:intergenic 30.0%
CCAATATCTTCATATAGTTC+AGG - chr1.2:51866285-51866304 None:intergenic 30.0%
CCTGAACTATATGAAGATAT+TGG + chr1.2:51866282-51866301 MS.gene059008:CDS 30.0%
CTCAGATATCCTGTAAATAT+AGG - chr1.2:51868483-51868502 None:intergenic 30.0%
GAATCAACAAAATCAGCATT+AGG - chr1.2:51867560-51867579 None:intergenic 30.0%
GATTAATCTTCCCTATTGAT+TGG - chr1.2:51864995-51865014 None:intergenic 30.0%
GCAACTTATTTATGTGCTTA+TGG - chr1.2:51865661-51865680 None:intergenic 30.0%
GCCCTTTAGCATAATATATT+TGG - chr1.2:51867889-51867908 None:intergenic 30.0%
GCCTATATGAATCCTAAAAT+TGG - chr1.2:51867201-51867220 None:intergenic 30.0%
GCTAACAATCCAAAAAGATA+TGG - chr1.2:51865217-51865236 None:intergenic 30.0%
GGTAACTTGAGTGTATATTT+AGG + chr1.2:51868581-51868600 MS.gene059008:intron 30.0%
GTCAAAACTAGCAAGTTAAT+AGG - chr1.2:51867847-51867866 None:intergenic 30.0%
GTGATGTTTAAGAAGAAAGA+AGG + chr1.2:51868797-51868816 MS.gene059008:CDS 30.0%
GTTTGATGTAACTAAAGCAT+GGG + chr1.2:51865240-51865259 MS.gene059008:intron 30.0%
TAGTTAATCCCCAATCAATA+GGG + chr1.2:51864982-51865001 MS.gene059008:intron 30.0%
TATACAGCATTTATTGGGTT+AGG + chr1.2:51868032-51868051 MS.gene059008:intron 30.0%
TATTTCTTTGCTCATACGAT+GGG - chr1.2:51865431-51865450 None:intergenic 30.0%
TCATCAATGAAAACAATAGC+AGG - chr1.2:51867138-51867157 None:intergenic 30.0%
TCCACATTATATAACTGTTG+CGG + chr1.2:51864211-51864230 MS.gene059008:CDS 30.0%
TGATTCAAATGAACAAAAGC+AGG - chr1.2:51868377-51868396 None:intergenic 30.0%
TGATTTCTCAAGATGTACTT+GGG + chr1.2:51864754-51864773 MS.gene059008:intron 30.0%
TGCTTCTTACTAATACAACT+TGG - chr1.2:51866847-51866866 None:intergenic 30.0%
TGTTTGATGTAACTAAAGCA+TGG + chr1.2:51865239-51865258 MS.gene059008:intron 30.0%
TTAAGCTGTTTATCCAAACA+AGG + chr1.2:51865191-51865210 MS.gene059008:intron 30.0%
TTGAACCTGGATTGAAAATT+AGG + chr1.2:51866000-51866019 MS.gene059008:intron 30.0%
! ACATATTTTCAGCCTCAATA+TGG - chr1.2:51864909-51864928 None:intergenic 30.0%
! ATTCCTTATGTACTGTTTTG+GGG + chr1.2:51866674-51866693 MS.gene059008:intron 30.0%
! CTTTTAGTATTAAGACGATG+AGG - chr1.2:51868113-51868132 None:intergenic 30.0%
! CTTTTCCTAATTTTCAATCC+AGG - chr1.2:51866008-51866027 None:intergenic 30.0%
! GAATTCCTTATGTACTGTTT+TGG + chr1.2:51866672-51866691 MS.gene059008:intron 30.0%
! GAATTGAAATTGTGAGTTGA+AGG - chr1.2:51865792-51865811 None:intergenic 30.0%
! GTTGTAGTTGTTTGAAATGA+AGG - chr1.2:51868189-51868208 None:intergenic 30.0%
! TGCATATTTAAGATACCACA+TGG - chr1.2:51867582-51867601 None:intergenic 30.0%
! TTAAAGAAGCAGCAGTTTTT+CGG - chr1.2:51866891-51866910 None:intergenic 30.0%
! TTAATCTTCCCTATTGATTG+GGG - chr1.2:51864993-51865012 None:intergenic 30.0%
! TTCTGATTCCTTTTTGATAC+AGG + chr1.2:51864385-51864404 MS.gene059008:intron 30.0%
! TTTTAGTGAAAGAAGTCTGT+TGG + chr1.2:51868214-51868233 MS.gene059008:intron 30.0%
!! ATAGTTAGACAAAGTTTTGG+GGG - chr1.2:51868547-51868566 None:intergenic 30.0%
!! ATTTGCTGTTTAATGTAGAC+TGG + chr1.2:51865371-51865390 MS.gene059008:intron 30.0%
!! TGGAAAGTATTTCTTTGACT+AGG + chr1.2:51867954-51867973 MS.gene059008:intron 30.0%
!! TTTGCTGTTTAATGTAGACT+GGG + chr1.2:51865372-51865391 MS.gene059008:intron 30.0%
!!! ATGGTGCTAATTTTTTTTGG+AGG + chr1.2:51867928-51867947 MS.gene059008:intron 30.0%
!!! ATTTTAGGATTCATATAGGC+GGG + chr1.2:51867201-51867220 MS.gene059008:intron 30.0%
!!! CCCAATTTTAGGATTCATAT+AGG + chr1.2:51867197-51867216 MS.gene059008:intron 30.0%
!!! TTAGATGGTTTTGATTCAAG+AGG + chr1.2:51867380-51867399 MS.gene059008:CDS 30.0%
AAAAACATGCACACTCACAA+AGG - chr1.2:51866778-51866797 None:intergenic 35.0%
AAATCATGGAAACTACTCCT+TGG + chr1.2:51868332-51868351 MS.gene059008:intron 35.0%
AATAGCAGGAGAAAGATCAT+CGG - chr1.2:51867124-51867143 None:intergenic 35.0%
ACTTATACCCTAAGACAGAA+GGG - chr1.2:51864715-51864734 None:intergenic 35.0%
AGCTCTGTTATTAGTACGAT+TGG - chr1.2:51864642-51864661 None:intergenic 35.0%
AGGAGATGTAAAAGTGATTC+TGG + chr1.2:51867400-51867419 MS.gene059008:CDS 35.0%
ATGTCAGCATAAGATTCCAA+AGG - chr1.2:51866201-51866220 None:intergenic 35.0%
ATTGCTCTGATACCATATTG+AGG + chr1.2:51864894-51864913 MS.gene059008:intron 35.0%
CAAATACTCCTTATACTCGT+TGG - chr1.2:51864021-51864040 None:intergenic 35.0%
CATATAGTTCAGGATGTGTA+AGG - chr1.2:51866275-51866294 None:intergenic 35.0%
CATTATATAACTGTTGCGGA+TGG + chr1.2:51864215-51864234 MS.gene059008:CDS 35.0%
CTAGTTAATCCCCAATCAAT+AGG + chr1.2:51864981-51865000 MS.gene059008:intron 35.0%
CTCCCAAACCAATTATAGTA+TGG - chr1.2:51865970-51865989 None:intergenic 35.0%
GAGACAAACCATAGAATTAC+CGG - chr1.2:51864093-51864112 None:intergenic 35.0%
GATCAGTGCTACAATTTACA+TGG + chr1.2:51863917-51863936 MS.gene059008:CDS 35.0%
GGAATCAGAAGTAAAGGTTA+TGG - chr1.2:51864375-51864394 None:intergenic 35.0%
GTCATATTATATGGAGAACC+TGG + chr1.2:51866324-51866343 MS.gene059008:CDS 35.0%
GTTTAATGTAGACTGGGAAT+GGG + chr1.2:51865378-51865397 MS.gene059008:intron 35.0%
TAACTGTTAATATGCCTTGC+AGG + chr1.2:51867294-51867313 MS.gene059008:intron 35.0%
TACAACACATGTTGTAGAAG+TGG - chr1.2:51864477-51864496 None:intergenic 35.0%
TACATAAGCACTTATGCTGT+AGG + chr1.2:51865161-51865180 MS.gene059008:intron 35.0%
TACTTATACCCTAAGACAGA+AGG - chr1.2:51864716-51864735 None:intergenic 35.0%
TATAGTTCAGGATGTGTAAG+GGG - chr1.2:51866273-51866292 None:intergenic 35.0%
TCAATAATGAATCAATGCCG+TGG + chr1.2:51866402-51866421 MS.gene059008:intron 35.0%
TCCGCAACAGTTATATAATG+TGG - chr1.2:51864215-51864234 None:intergenic 35.0%
TGATGCATTGTATCACTTCA+TGG + chr1.2:51867236-51867255 MS.gene059008:intron 35.0%
TGTTTAATGTAGACTGGGAA+TGG + chr1.2:51865377-51865396 MS.gene059008:intron 35.0%
TTGGAATCTTATGCTGACAT+TGG + chr1.2:51866201-51866220 MS.gene059008:CDS 35.0%
! AAAAGTTCCCTCACAAGTTT+TGG - chr1.2:51867093-51867112 None:intergenic 35.0%
! AACAAGAAGACGTATTTTCC+AGG + chr1.2:51867511-51867530 MS.gene059008:CDS 35.0%
! ATTCCTTTTTGATACAGGAC+CGG + chr1.2:51864390-51864409 MS.gene059008:intron 35.0%
! CAAACAAGGCCATATCTTTT+TGG + chr1.2:51865205-51865224 MS.gene059008:intron 35.0%
! CTATTGATTGGGGATTAACT+AGG - chr1.2:51864983-51865002 None:intergenic 35.0%
! GAGTATCTGAATTTTGAACC+TGG + chr1.2:51865987-51866006 MS.gene059008:intron 35.0%
! TCACTTCATGGACTCTTTTA+AGG + chr1.2:51867248-51867267 MS.gene059008:intron 35.0%
! TCCTTTTGATGTCGTTCATT+CGG + chr1.2:51864667-51864686 MS.gene059008:intron 35.0%
! TCTGAAGTTATGACTCAGTT+TGG + chr1.2:51864830-51864849 MS.gene059008:intron 35.0%
! TGAAGTTGATCCAATGGTAT+CGG + chr1.2:51866155-51866174 MS.gene059008:CDS 35.0%
! TTCTTCCAAGTTGACATCAT+CGG - chr1.2:51867688-51867707 None:intergenic 35.0%
!! AGCACTTTTTATTCTGACAC+TGG - chr1.2:51868439-51868458 None:intergenic 35.0%
!! ATACAAAAGTACTTGGGAGA+TGG + chr1.2:51867066-51867085 MS.gene059008:CDS 35.0%
!! ATTCTCTGGAGCTGATATAA+AGG + chr1.2:51867728-51867747 MS.gene059008:CDS 35.0%
!! CAAAAAGATATGGCCTTGTT+TGG - chr1.2:51865207-51865226 None:intergenic 35.0%
!! GCATGTCTTGACTTTAGAAT+GGG + chr1.2:51868509-51868528 MS.gene059008:intron 35.0%
!! GGAAGAATTTGTTATGACCA+AGG + chr1.2:51867701-51867720 MS.gene059008:CDS 35.0%
!! GTTTGCTGTTTAATGTAGAC+TGG + chr1.2:51865848-51865867 MS.gene059008:intron 35.0%
!! TAAGGAGTATTTGCAGCTAA+AGG + chr1.2:51864028-51864047 MS.gene059008:CDS 35.0%
!! TAGAATTAGGAGGTATCTCT+AGG + chr1.2:51865526-51865545 MS.gene059008:intron 35.0%
!!! CGTCTTCTTGTTTTGATATC+AGG - chr1.2:51867503-51867522 None:intergenic 35.0%
!!! CTAATTTTTTTTGGAGGAGC+TGG + chr1.2:51867934-51867953 MS.gene059008:intron 35.0%
!!! CTGATTTTGTTGATTCCATG+TGG + chr1.2:51867564-51867583 MS.gene059008:intron 35.0%
!!! CTTGTTTTGATATCAGGAAG+AGG - chr1.2:51867497-51867516 None:intergenic 35.0%
!!! TTTTAGGATTCATATAGGCG+GGG + chr1.2:51867202-51867221 MS.gene059008:intron 35.0%
AAAGTCTCTCTGTGAGTTTG+GGG + chr1.2:51866644-51866663 MS.gene059008:intron 40.0%
AAAGTTGAAGCTACTGGTGT+CGG + chr1.2:51864242-51864261 MS.gene059008:CDS 40.0%
AACTACTCTGATGTCTCAAC+TGG - chr1.2:51865831-51865850 None:intergenic 40.0%
AAGGCAATATGTACTGAAGC+TGG + chr1.2:51867747-51867766 MS.gene059008:CDS 40.0%
ACACATGTTGTAGAAGTGGA+AGG - chr1.2:51864473-51864492 None:intergenic 40.0%
ACAGAACTCAGAGACAAAGA+AGG - chr1.2:51864284-51864303 None:intergenic 40.0%
ACTTTCATGACCGATACCAT+TGG - chr1.2:51866168-51866187 None:intergenic 40.0%
AGATGGTCCAAAACTTGTGA+GGG + chr1.2:51867083-51867102 MS.gene059008:CDS 40.0%
AGTTCAAACCTTTGCAAGCA+AGG - chr1.2:51866361-51866380 None:intergenic 40.0%
ATATATGCTCTTGTGCCTTC+AGG + chr1.2:51866990-51867009 MS.gene059008:intron 40.0%
ATGACCAAGGATGAATTCTC+TGG + chr1.2:51867714-51867733 MS.gene059008:CDS 40.0%
ATGTCGTTCATTCGGATGTT+TGG + chr1.2:51864675-51864694 MS.gene059008:intron 40.0%
ATTAGCCGATGATGTCAACT+TGG + chr1.2:51867680-51867699 MS.gene059008:CDS 40.0%
ATTATGCTAAAGGGCGAGTT+GGG + chr1.2:51867894-51867913 MS.gene059008:intron 40.0%
ATTGGTATCAAGCCTCCTAA+GGG + chr1.2:51866300-51866319 MS.gene059008:CDS 40.0%
CAAATGAACAAAAGCAGGCT+TGG - chr1.2:51868372-51868391 None:intergenic 40.0%
CACTGCAGAGACTCTAAATT+AGG - chr1.2:51864578-51864597 None:intergenic 40.0%
CATCACATGCACTATCAGTT+AGG + chr1.2:51866963-51866982 MS.gene059008:intron 40.0%
CCATATAATATGACCCCCTT+AGG - chr1.2:51866318-51866337 None:intergenic 40.0%
CCTAAGGGGGTCATATTATA+TGG + chr1.2:51866315-51866334 MS.gene059008:CDS 40.0%
CTCAGAGACAAAGAAGGAAT+AGG - chr1.2:51864278-51864297 None:intergenic 40.0%
CTCTCTCACAGTAAGTACAA+CGG - chr1.2:51863883-51863902 None:intergenic 40.0%
GAAAGTCTCTCTGTGAGTTT+GGG + chr1.2:51866643-51866662 MS.gene059008:intron 40.0%
GAATCCAAAACCCATCCAAT+AGG - chr1.2:51864128-51864147 None:intergenic 40.0%
GAATCTTATGCTGACATTGG+TGG + chr1.2:51866204-51866223 MS.gene059008:CDS 40.0%
GAGTTGCTGAACCAATTAGA+TGG + chr1.2:51867365-51867384 MS.gene059008:CDS 40.0%
GATCAACTTCATCTTGCAGA+AGG - chr1.2:51866146-51866165 None:intergenic 40.0%
GATGTAACTAAAGCATGGGA+GGG + chr1.2:51865244-51865263 MS.gene059008:intron 40.0%
GCTAACAAGCCAAAAAGACA+AGG - chr1.2:51865698-51865717 None:intergenic 40.0%
GGAGGGTTGAGAATTGATAA+TGG + chr1.2:51865747-51865766 MS.gene059008:intron 40.0%
GTACTTACTGTGAGAGAGAT+AGG + chr1.2:51863885-51863904 MS.gene059008:CDS 40.0%
GTGGAGAACGTGAAATTCAA+AGG + chr1.2:51867333-51867352 MS.gene059008:CDS 40.0%
TATAATATGACCCCCTTAGG+AGG - chr1.2:51866315-51866334 None:intergenic 40.0%
TATCAGGTTCTTTCGGTTGT+TGG + chr1.2:51866120-51866139 MS.gene059008:intron 40.0%
TATTATGCTAAAGGGCGAGT+TGG + chr1.2:51867893-51867912 MS.gene059008:intron 40.0%
TATTGGTATCAAGCCTCCTA+AGG + chr1.2:51866299-51866318 MS.gene059008:CDS 40.0%
TCACTCTACACCTATTGGAT+GGG + chr1.2:51864115-51864134 MS.gene059008:CDS 40.0%
TCCGAATGAACGACATCAAA+AGG - chr1.2:51864671-51864690 None:intergenic 40.0%
TCCTTTGCCTTCTTAAAGTC+AGG - chr1.2:51868773-51868792 None:intergenic 40.0%
TCTCTCACAGTAAGTACAAC+GGG - chr1.2:51863882-51863901 None:intergenic 40.0%
TGAAAGTCTCTCTGTGAGTT+TGG + chr1.2:51866642-51866661 MS.gene059008:intron 40.0%
TGATGTAACTAAAGCATGGG+AGG + chr1.2:51865243-51865262 MS.gene059008:intron 40.0%
TGCTCATACCGGTAATTCTA+TGG + chr1.2:51864082-51864101 MS.gene059008:CDS 40.0%
TGGTTTAGATGCACAGATTC+AGG + chr1.2:51866224-51866243 MS.gene059008:CDS 40.0%
TGTCGTTCATTCGGATGTTT+GGG + chr1.2:51864676-51864695 MS.gene059008:intron 40.0%
TTATATGGAGAACCTGGAAC+AGG + chr1.2:51866330-51866349 MS.gene059008:CDS 40.0%
TTGATTGGGGATTAACTAGG+AGG - chr1.2:51864980-51864999 None:intergenic 40.0%
! CAGTGTGAGTCTTGTCAATT+GGG + chr1.2:51864593-51864612 MS.gene059008:CDS 40.0%
! CTAACTGATAGTGCATGTGA+TGG - chr1.2:51866965-51866984 None:intergenic 40.0%
! GACTCATCCTGACTTTAAGA+AGG + chr1.2:51868763-51868782 MS.gene059008:CDS 40.0%
! GCAAGATGAAGTTGATCCAA+TGG + chr1.2:51866149-51866168 MS.gene059008:CDS 40.0%
! GCTATTTGTCTGTTGCTTAC+AGG + chr1.2:51866559-51866578 MS.gene059008:intron 40.0%
! GGCATGTCTTGACTTTAGAA+TGG + chr1.2:51868508-51868527 MS.gene059008:intron 40.0%
! GTTGTTTGAAATGAAGGGAG+AGG - chr1.2:51868183-51868202 None:intergenic 40.0%
! TATTGGGTTAGGTTGTCTGT+GGG + chr1.2:51868043-51868062 MS.gene059008:intron 40.0%
! TCCTGACTTTAAGAAGGCAA+AGG + chr1.2:51868769-51868788 MS.gene059008:CDS 40.0%
! TTATTGGGTTAGGTTGTCTG+TGG + chr1.2:51868042-51868061 MS.gene059008:intron 40.0%
! TTTAGGATTCATATAGGCGG+GGG + chr1.2:51867203-51867222 MS.gene059008:intron 40.0%
!! CAAAAAGACAAGGCCTTGTT+TGG - chr1.2:51865688-51865707 None:intergenic 40.0%
!! CAAACAAGGCCTTGTCTTTT+TGG + chr1.2:51865686-51865705 MS.gene059008:intron 40.0%
!! GGTTCTAAAGTTGAAGCTAC+TGG + chr1.2:51864236-51864255 MS.gene059008:CDS 40.0%
!! TACACCTATTGGATGGGTTT+TGG + chr1.2:51864121-51864140 MS.gene059008:CDS 40.0%
!!! AGCAGGCTTGGTGTTTTAAA+AGG - chr1.2:51868360-51868379 None:intergenic 40.0%
!!! ATTGGATGGGTTTTGGATTC+TGG + chr1.2:51864128-51864147 MS.gene059008:CDS 40.0%
!!! TGGTGTTTTAAAAGGCACCA+AGG - chr1.2:51868352-51868371 None:intergenic 40.0%
AAGACCACGCGATTCAATTC+CGG - chr1.2:51864438-51864457 None:intergenic 45.0%
AAGTCTCTCTGTGAGTTTGG+GGG + chr1.2:51866645-51866664 MS.gene059008:intron 45.0%
AAGTGCTTGTTCGATTCCAC+TGG + chr1.2:51868452-51868471 MS.gene059008:intron 45.0%
AATCATCATACTTTCCCGCG+AGG + chr1.2:51868392-51868411 MS.gene059008:intron 45.0%
ACCTCTACAGACTGAGTCAA+AGG + chr1.2:51863971-51863990 MS.gene059008:CDS 45.0%
AGCTCCAGAGAATTCATCCT+TGG - chr1.2:51867721-51867740 None:intergenic 45.0%
AGGAAAGACCTTGCTTGCAA+AGG + chr1.2:51866350-51866369 MS.gene059008:CDS 45.0%
AGTGCTTGTTCGATTCCACT+GGG + chr1.2:51868453-51868472 MS.gene059008:intron 45.0%
ATCATCATACTTTCCCGCGA+GGG + chr1.2:51868393-51868412 MS.gene059008:intron 45.0%
ATCGGTCATGAAAGTCGAGA+AGG + chr1.2:51866173-51866192 MS.gene059008:CDS 45.0%
CCACCCCAAAACAGTACATA+AGG - chr1.2:51866680-51866699 None:intergenic 45.0%
CTAAAGTCAAGACATGCCTC+AGG - chr1.2:51868506-51868525 None:intergenic 45.0%
CTCACTCTACACCTATTGGA+TGG + chr1.2:51864114-51864133 MS.gene059008:CDS 45.0%
CTCTCTCACTCTACACCTAT+TGG + chr1.2:51864110-51864129 MS.gene059008:CDS 45.0%
CTGGGTGGTCCTATATTTAC+AGG + chr1.2:51868471-51868490 MS.gene059008:intron 45.0%
CTTATACTCGTTGGCAGACA+AGG - chr1.2:51864012-51864031 None:intergenic 45.0%
CTTGTCTGCCAACGAGTATA+AGG + chr1.2:51864010-51864029 MS.gene059008:CDS 45.0%
GAGATGGTCCAAAACTTGTG+AGG + chr1.2:51867082-51867101 MS.gene059008:CDS 45.0%
GCTACATTCTTGCGTGTAGT+AGG + chr1.2:51867033-51867052 MS.gene059008:CDS 45.0%
GTAAATATAGGACCACCCAG+TGG - chr1.2:51868471-51868490 None:intergenic 45.0%
GTCGTTCATTCGGATGTTTG+GGG + chr1.2:51864677-51864696 MS.gene059008:intron 45.0%
GTTCCGGTCCTGTATCAAAA+AGG - chr1.2:51864396-51864415 None:intergenic 45.0%
TAGACTGGGAATGGGAATCA+AGG + chr1.2:51865863-51865882 MS.gene059008:intron 45.0%
TCAGCTACTGTTGCTCATAC+CGG + chr1.2:51864071-51864090 MS.gene059008:CDS 45.0%
TGTAGAGGTTTGAGCAACGT+TGG - chr1.2:51863960-51863979 None:intergenic 45.0%
TTACAGGATATCTGAGCCTG+AGG + chr1.2:51868487-51868506 MS.gene059008:intron 45.0%
TTATGCTAAAGGGCGAGTTG+GGG + chr1.2:51867895-51867914 MS.gene059008:intron 45.0%
TTGATGCAGTCGGTACAAAG+AGG + chr1.2:51867160-51867179 MS.gene059008:CDS 45.0%
TTGGTATCAAGCCTCCTAAG+GGG + chr1.2:51866301-51866320 MS.gene059008:CDS 45.0%
TTGTAGAAGTGGAAGGATCG+AGG - chr1.2:51864466-51864485 None:intergenic 45.0%
TTTCAGCGGCAATTACAGTG+TGG - chr1.2:51865497-51865516 None:intergenic 45.0%
TTTGATACAGGACCGGAACA+CGG + chr1.2:51864397-51864416 MS.gene059008:intron 45.0%
! AAGCTGGCTTACTTGCTCTA+AGG + chr1.2:51867763-51867782 MS.gene059008:CDS 45.0%
! ACAGTTTGCTCTTCTGTCTG+TGG + chr1.2:51866811-51866830 MS.gene059008:intron 45.0%
! AGCTGGCTTACTTGCTCTAA+GGG + chr1.2:51867764-51867783 MS.gene059008:CDS 45.0%
! GCAGTGTGAGTCTTGTCAAT+TGG + chr1.2:51864592-51864611 MS.gene059008:CDS 45.0%
! GTTTGAAATGAAGGGAGAGG+TGG - chr1.2:51868180-51868199 None:intergenic 45.0%
! TGTCTGTTGCTTACAGGTAC+TGG + chr1.2:51866565-51866584 MS.gene059008:intron 45.0%
!! AAGAAAGAAGGAGTGCCAGA+AGG + chr1.2:51868809-51868828 MS.gene059008:CDS 45.0%
!!! CCTTATGTACTGTTTTGGGG+TGG + chr1.2:51866677-51866696 MS.gene059008:intron 45.0%
!!! GTTTTGGGGTGGTTTTACTG+TGG + chr1.2:51866688-51866707 MS.gene059008:intron 45.0%
!! TTTAATTAAAAAATAAATCA+TGG + chr1.2:51868318-51868337 MS.gene059008:intron 5.0%
AAGACAGAAGGGACACGACT+AGG - chr1.2:51864704-51864723 None:intergenic 50.0%
AGCAAGGTCTTTCCTGTTCC+AGG - chr1.2:51866345-51866364 None:intergenic 50.0%
AGGTATGATGCTCACTCAGG+TGG + chr1.2:51867314-51867333 MS.gene059008:intron 50.0%
AGTCGTGTCCCTTCTGTCTT+AGG + chr1.2:51864704-51864723 MS.gene059008:intron 50.0%
AGTCTCTCTGTGAGTTTGGG+GGG + chr1.2:51866646-51866665 MS.gene059008:intron 50.0%
ATCTTCCTGTCGATACGACC+AGG - chr1.2:51867467-51867486 None:intergenic 50.0%
CTACAGACTGAGTCAAAGGC+TGG + chr1.2:51863975-51863994 MS.gene059008:CDS 50.0%
GAAAGTCGAGAAGGCTCCTT+TGG + chr1.2:51866182-51866201 MS.gene059008:CDS 50.0%
GAGTGAGCATCATACCTGCA+AGG - chr1.2:51867311-51867330 None:intergenic 50.0%
GCCTTTGACTCAGTCTGTAG+AGG - chr1.2:51863975-51863994 None:intergenic 50.0%
GGAGGGTTGAGAATTGAGAG+TGG + chr1.2:51865261-51865280 MS.gene059008:intron 50.0%
GGTATGAGCAACAGTAGCTG+AGG - chr1.2:51864072-51864091 None:intergenic 50.0%
GTCGTGTCCCTTCTGTCTTA+GGG + chr1.2:51864705-51864724 MS.gene059008:intron 50.0%
TAGACTGGGAATGGGAGTTG+TGG + chr1.2:51865386-51865405 MS.gene059008:intron 50.0%
TCTAAGGGAACGCCGAATGA+AGG + chr1.2:51867779-51867798 MS.gene059008:CDS 50.0%
TGAGAGAGATAGGCACACTC+AGG + chr1.2:51863895-51863914 MS.gene059008:CDS 50.0%
TGCAGGTATGATGCTCACTC+AGG + chr1.2:51867311-51867330 MS.gene059008:intron 50.0%
TGGTATCAAGCCTCCTAAGG+GGG + chr1.2:51866302-51866321 MS.gene059008:CDS 50.0%
TTGAGTTTGCCACAGCCTGA+AGG - chr1.2:51867008-51867027 None:intergenic 50.0%
TTGATACAGGACCGGAACAC+GGG + chr1.2:51864398-51864417 MS.gene059008:intron 50.0%
TTGGATGACCTAAGCGACGA+TGG - chr1.2:51864520-51864539 None:intergenic 50.0%
! CTTTTGCATTATCGCTGCGC+AGG - chr1.2:51864871-51864890 None:intergenic 50.0%
! GCAACGTTGGCAGTTTTGCT+TGG - chr1.2:51863947-51863966 None:intergenic 50.0%
! GCTGCTGAACCCCCAATTTT+AGG + chr1.2:51867186-51867205 MS.gene059008:intron 50.0%
!! GAGTTGGGGTGGATTGGTTA+TGG + chr1.2:51867909-51867928 MS.gene059008:intron 50.0%
AAGCGACGATGGAGGAGTTC+AGG - chr1.2:51864509-51864528 None:intergenic 55.0%
ACACTGGAATCCTCCCCGTT+GGG - chr1.2:51868423-51868442 None:intergenic 55.0%
ACGGGACAGACGATTGGAAC+CGG + chr1.2:51864416-51864435 MS.gene059008:CDS 55.0%
AGCGGCAATTACAGTGTGGC+TGG - chr1.2:51865493-51865512 None:intergenic 55.0%
ATGCAGCGCAACTGAAGCGT+GGG + chr1.2:51865726-51865745 MS.gene059008:intron 55.0%
ATGGTCGAGGACGTGGTAGA+GGG + chr1.2:51863843-51863862 MS.gene059008:CDS 55.0%
CAATCGTCTGTCCCGTGTTC+CGG - chr1.2:51864412-51864431 None:intergenic 55.0%
GAACTCCTCCATCGTCGCTT+AGG + chr1.2:51864509-51864528 MS.gene059008:CDS 55.0%
GATCCAGCTTTGCTACGACC+TGG + chr1.2:51867446-51867465 MS.gene059008:CDS 55.0%
GATGACCTAAGCGACGATGG+AGG - chr1.2:51864517-51864536 None:intergenic 55.0%
GCTTGTTCGATTCCACTGGG+TGG + chr1.2:51868456-51868475 MS.gene059008:intron 55.0%
GGAACCGGAATTGAATCGCG+TGG + chr1.2:51864431-51864450 MS.gene059008:CDS 55.0%
TCATACTTTCCCGCGAGGGT+TGG + chr1.2:51868397-51868416 MS.gene059008:intron 55.0%
! GGTTAGGTTGTCTGTGGGTG+TGG + chr1.2:51868048-51868067 MS.gene059008:intron 55.0%
! TACGACCTGGTCGTATCGAC+AGG + chr1.2:51867459-51867478 MS.gene059008:CDS 55.0%
AGCGCAACTGAAGCGTGGGA+GGG + chr1.2:51865730-51865749 MS.gene059008:intron 60.0%
CGACCAGGTCGTAGCAAAGC+TGG - chr1.2:51867452-51867471 None:intergenic 60.0%
CGGAACACGGGACAGACGAT+TGG + chr1.2:51864410-51864429 MS.gene059008:CDS 60.0%
GACACTGGAATCCTCCCCGT+TGG - chr1.2:51868424-51868443 None:intergenic 60.0%
GATGCAGCGCAACTGAAGCG+TGG + chr1.2:51865725-51865744 MS.gene059008:intron 60.0%
GCTCTTGTGCCTTCAGGCTG+TGG + chr1.2:51866996-51867015 MS.gene059008:intron 60.0%
TGGTCGAGGACGTGGTAGAG+GGG + chr1.2:51863844-51863863 MS.gene059008:CDS 60.0%
! AAGGGCGAGTTGGGGTGGAT+TGG + chr1.2:51867903-51867922 MS.gene059008:intron 60.0%
! TGCTAAAGGGCGAGTTGGGG+TGG + chr1.2:51867898-51867917 MS.gene059008:intron 60.0%
CAGCGCAACTGAAGCGTGGG+AGG + chr1.2:51865729-51865748 MS.gene059008:intron 65.0%
GGACGTGGTAGAGGGGGTAG+AGG + chr1.2:51863851-51863870 MS.gene059008:CDS 65.0%
GGTCGAGGACGTGGTAGAGG+GGG + chr1.2:51863845-51863864 MS.gene059008:CDS 65.0%
!! TCCCGCGAGGGTTGGCCCAA+CGG + chr1.2:51868405-51868424 MS.gene059008:intron 70.0%
CCCCGTTGGGCCAACCCTCG+CGG - chr1.2:51868410-51868429 None:intergenic 75.0%
CCCGTTGGGCCAACCCTCGC+GGG - chr1.2:51868409-51868428 None:intergenic 75.0%
!! CCCGCGAGGGTTGGCCCAAC+GGG + chr1.2:51868406-51868425 MS.gene059008:intron 75.0%
!! CCGCGAGGGTTGGCCCAACG+GGG + chr1.2:51868407-51868426 MS.gene059008:intron 75.0%
!! CGAGGGTTGGCCCAACGGGG+AGG + chr1.2:51868410-51868429 MS.gene059008:intron 75.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 51863843 51868844 51863843 ID=MS.gene059008
chr1.2 mRNA 51863843 51868844 51863843 ID=MS.gene059008.t1;Parent=MS.gene059008
chr1.2 exon 51863843 51864268 51863843 ID=MS.gene059008.t1.exon1;Parent=MS.gene059008.t1
chr1.2 CDS 51863843 51864268 51863843 ID=cds.MS.gene059008.t1;Parent=MS.gene059008.t1
chr1.2 exon 51864407 51864622 51864407 ID=MS.gene059008.t1.exon2;Parent=MS.gene059008.t1
chr1.2 CDS 51864407 51864622 51864407 ID=cds.MS.gene059008.t1;Parent=MS.gene059008.t1
chr1.2 exon 51866126 51866371 51866126 ID=MS.gene059008.t1.exon3;Parent=MS.gene059008.t1
chr1.2 CDS 51866126 51866371 51866126 ID=cds.MS.gene059008.t1;Parent=MS.gene059008.t1
chr1.2 exon 51867012 51867181 51867012 ID=MS.gene059008.t1.exon4;Parent=MS.gene059008.t1
chr1.2 CDS 51867012 51867181 51867012 ID=cds.MS.gene059008.t1;Parent=MS.gene059008.t1
chr1.2 exon 51867316 51867532 51867316 ID=MS.gene059008.t1.exon5;Parent=MS.gene059008.t1
chr1.2 CDS 51867316 51867532 51867316 ID=cds.MS.gene059008.t1;Parent=MS.gene059008.t1
chr1.2 exon 51867660 51867800 51867660 ID=MS.gene059008.t1.exon6;Parent=MS.gene059008.t1
chr1.2 CDS 51867660 51867800 51867660 ID=cds.MS.gene059008.t1;Parent=MS.gene059008.t1
chr1.2 exon 51868761 51868844 51868761 ID=MS.gene059008.t1.exon7;Parent=MS.gene059008.t1
chr1.2 CDS 51868761 51868844 51868761 ID=cds.MS.gene059008.t1;Parent=MS.gene059008.t1
Gene Sequence

>MS.gene059008

ATGGTCGAGGACGTGGTAGAGGGGGTAGAGGTAACTCCCGTTGTACTTACTGTGAGAGAGATAGGCACACTCAGGATCAGTGCTACAATTTACATGGTTTTCCAAGCAAAACTGCCAACGTTGCTCAAACCTCTACAGACTGAGTCAAAGGCTGGATCTGAAACTACCTTGTCTGCCAACGAGTATAAGGAGTATTTGCAGCTAAAGGCATCACAACATGCAACTTCCTCAGCTACTGTTGCTCATACCGGTAATTCTATGGTTTGTCTCTCTCACTCTACACCTATTGGATGGGTTTTGGATTCTGGTGCTTCAGATCACGTAACTAGTAATTCTGCTCTTTTCTCTGAATTATCAACACCAAAATATCCACATTATATAACTGTTGCGGATGGTTCTAAAGTTGAAGCTACTGGTGTCGGACAAGTTTCACCTATTCCTTCTTTGTCTCTGAGTTCTGTTTTATTGATTCCCAATTTTCCCTTCAATTTGATTTCTATAAGCAAATTAACTCGTTCCTTAAATTGTGCCATAACCTTTACTTCTGATTCCTTTTTGATACAGGACCGGAACACGGGACAGACGATTGGAACCGGAATTGAATCGCGTGGTCTTTACTACCTCGATCCTTCCACTTCTACAACATGTGTTGTAGTTGAATCTCCTGAACTCCTCCATCGTCGCTTAGGTCATCCAAGTCTATCAAAATTGAAGAAAATGGTGTCTGGTCTTCCTAATTTAGAGTCTCTGCAGTGTGAGTCTTGTCAATTGGGAAAGCATGTTAGAGTTTCTTTTTCCAATCGTACTAATAACAGAGCTATGTCTCCTTTTGATGTCGTTCATTCGGATGTTTGGGGTCCTAGTCGTGTCCCTTCTGTCTTAGGGTATAAGTATTATGTTACATTCATTGATGATTTCTCAAGATGTACTTGGGTATTTTTAATGAAAGATCGTTCTGAGTTGTTTAATATTTTTAAGAATTTTTGTTCTGAAGTTATGACTCAGTTTGGCAAAACAATTCGCATCCTGCGCAGCGATAATGCAAAAGAATATTGCTCTGATACCATATTGAGGCTGAAAATATGTTCATTATATTATGTGGGCAGAATATACAGTTATATATATAGGCAGGAGCCTCCTAGTTAATCCCCAATCAATAGGGAAGATTAATCAATACAATCAATACAATAAATAAGGAAGATAAAACTAAACAGTCACAACTATTCAATATCTCAACAAAACTCTTTATGATAGCTTACAAAACAGCTTATAGTTTATATGAAATACTTCATTTTATTTTTTGCTATTGAAATAGTTATACATAAGCACTTATGCTGTAGGTGTTTAATTAAGCTGTTTATCCAAACAAGGCCATATCTTTTTGGATTGTTAGCTATGTTTGATGTAACTAAAGCATGGGAGGGTTGAGAATTGAGAGTGGAGTTTTAACTCAATTATTAGAATTTGACTCGCAATTTCTCAACCCTTTTATAAAACGATCTCAATAGTGAATTGGAGCATCAGAGTAATTTGCTGTTTAATGTAGACTGGGAATGGGAGTTGTGGACAATTGTCTAATAATATACCCATCGTATGAGCAAAGAAATATTCGTATCCTTTCGATGAATTAATGTTGTTTACGTGATACCAGCCACACTGTAATTGCCGCTGAAACATTCTTTATAGAATTAGGAGGTATCTCTAGGATAGCTTACTAAACAGCTTATAGTTTATATGAAAACAATTATACTTTATTTTATCTTTTGTTATTGAAATAGTGTATATATTTAAGCACAAATGTGATAAACGCATATGCCATAAGCACATAAATAAGTTGCTTATCCAAACAAGGCCTTGTCTTTTTGGCTTGTTAGCTATGTGTGATGCAGCGCAACTGAAGCGTGGGAGGGTTGAGAATTGATAATGGAGTTTAACTCAATTGTTACCCTTCAACTCACAATTTCAATTCTTTTATAAAACGAGAACCAGTTGAGACATCAGAGTAGTTTGCTGTTTAATGTAGACTGGGAATGGGAATCAAGGAGATTTTTCTAATAATATACTCATTGTATGATCAAAGAAGCATTCATATCCTTTTGAAGAAGTAATGAGCTTAATTTGATACCATACTATAATTGGTTTGGGAGTATCTGAATTTTGAACCTGGATTGAAAATTAGGAAAAGTTTTGGTTGAAATATTCTTTATAGAATTAGGCATCTCCTGTTATTGTTTGTATAATTTGATCTAGATGATATGATGATTATGATTGATTTTTTATCAGGTTCTTTCGGTTGTTGGCCTTCTGCAAGATGAAGTTGATCCAATGGTATCGGTCATGAAAGTCGAGAAGGCTCCTTTGGAATCTTATGCTGACATTGGTGGTTTAGATGCACAGATTCAGGAAATTAAAGAGGCAGTTGAGCTACCCCTTACACATCCTGAACTATATGAAGATATTGGTATCAAGCCTCCTAAGGGGGTCATATTATATGGAGAACCTGGAACAGGAAAGACCTTGCTTGCAAAGGTTTGAACTTTTTCACTTTGCTTAACTTGTTCAATAATGAATCAATGCCGTGGAATTTATATTGTTTTTCTCTGTTGTACATGTACAAAATAGATTTGTGTGATTATCAGATCTGTAGAGTTTGGAAATGACTTTGTCTGCAATTCTGCATTTTTTACAATGTTACTTTCTGGAGTTCTAGTTATTTGCTATTTGTCTGTTGCTTACAGGTACTGGAAGATATTTTGTAAGAACATCATTTTTTTTCATTTTTGGATATTAAGATTAAGATGAAAGTCTCTCTGTGAGTTTGGGGGGATAGAATTCCTTATGTACTGTTTTGGGGTGGTTTTACTGTGGACACATTTAAAGATGATATATACTGTATTGATACTGGTGACATATGTTGCAATGTCGTTTTTATCCTTTGTGAGTGTGCATGTTTTTAAAAAATTAGAATACAGTTTGCTCTTCTGTCTGTGGTTGTCAGTCACCAAGTTGTATTAGTAAGAAGCAACTGATATGAAGAAAAAGCAACCGAAAAACTGCTGCTTCTTTAAACAATTACTAAGTTGGTATATTATATTTTATATTGCTTGTAATTCGTGATACCATCACATGCACTATCAGTTAGGTCTAATATATGCTCTTGTGCCTTCAGGCTGTGGCAAACTCAACATCAGCTACATTCTTGCGTGTAGTAGGTAGTGAATTGATACAAAAGTACTTGGGAGATGGTCCAAAACTTGTGAGGGAACTTTTCAGAGTCGCCGATGATCTTTCTCCTGCTATTGTTTTCATTGATGAAATTGATGCAGTCGGTACAAAGAGGTAAGCTGCTGAACCCCCAATTTTAGGATTCATATAGGCGGGGGTGTAGTAGAGTGATGCATTGTATCACTTCATGGACTCTTTTAAGGTTTTCTCCTTACATTCATGAGTTTAACTGTTAATATGCCTTGCAGGTATGATGCTCACTCAGGTGGAGAACGTGAAATTCAAAGGACTATGTTAGAGTTGCTGAACCAATTAGATGGTTTTGATTCAAGAGGAGATGTAAAAGTGATTCTGGCTACCAACAGAATTGAAAGTCTTGATCCAGCTTTGCTACGACCTGGTCGTATCGACAGGAAGATTGAATTTCCTCTTCCTGATATCAAAACAAGAAGACGTATTTTCCAGGTAAACATGATTAGTTTTGTGAATCCTAATGCTGATTTTGTTGATTCCATGTGGTATCTTAAATATGCATATTCTGTTTGATCATGCGACTGCGACTGAATGACTTAATGCTTGCTTTTAAATTAAGATACACACATCGAGGATGACATTAGCCGATGATGTCAACTTGGAAGAATTTGTTATGACCAAGGATGAATTCTCTGGAGCTGATATAAAGGCAATATGTACTGAAGCTGGCTTACTTGCTCTAAGGGAACGCCGAATGAAGGTTAAAAATTTATTCACGTTTCTATTGATAATGCTGTTTGTAACCTATTAACTTGCTAGTTTTGACAAGCTCATTTTAATATGACCCAAATATATTATGCTAAAGGGCGAGTTGGGGTGGATTGGTTATGGTGCTAATTTTTTTTGGAGGAGCTGGAAAGTATTTCTTTGACTAGGTCTCTGAATTTTGAGACAAGAAAATATTAAGAATGCTGACCTAGTTTCATATTTATATACAGCATTTATTGGGTTAGGTTGTCTGTGGGTGTGGATATATCATATTAAGCTACTTAAAAAATTTGCATCACATCCTCATCGTCTTAATACTAAAAGAAAACAAAGCATTTTTACAGAAAGGAAAAACTTTGTAGTTTTTTCCACCTCTCCCTTCATTTCAAACAACTACAACTTAGTTTTTAGTGAAAGAAGTCTGTTGGTTTCATCTTTTAATATTATTAGGGTGGAGAAATATGCAAGCAAAAGTAGCATACTCTAATTAAATCAATTCAGAAAATTATTTTAATTAAAAAATAAATCATGGAAACTACTCCTTGGTGCCTTTTAAAACACCAAGCCTGCTTTTGTTCATTTGAATCATCATACTTTCCCGCGAGGGTTGGCCCAACGGGGAGGATTCCAGTGTCAGAATAAAAAGTGCTTGTTCGATTCCACTGGGTGGTCCTATATTTACAGGATATCTGAGCCTGAGGCATGTCTTGACTTTAGAATGGGACAACATTCACTCCCCCAAAACTTTGTCTAACTATAGTTACATTTTGTAGGTAACTTGAGTGTATATTTAGGTCCAATTTTTTACTTCAGTGAATCACTTCCCATCTTTACCTATCAATCTTATGTTTTTTTAAGGATTTGTCTGTATTATCTTTTGGTTTGTACATTTCATTTTAAGTTTGATCCTCCAATTTATGATATCTTACTATTACTTTTATATCTTGTTCAGGTGACTCATCCTGACTTTAAGAAGGCAAAGGATAAAGTGATGTTTAAGAAGAAAGAAGGAGTGCCAGAAGGACTATATATGTGA
Protein sequence

>MS.gene059008.t1

MVEDVVEGVEVTPVVLTVREIGTLRISATIYMVFQAKLPTLLKPLQTESKAGSETTLSANEYKEYLQLKASQHATSSATVAHTGNSMVCLSHSTPIGWVLDSGASDHVTSNSALFSELSTPKYPHYITVADGSKVEATGVGQDRNTGQTIGTGIESRGLYYLDPSTSTTCVVVESPELLHRRLGHPSLSKLKKMVSGLPNLESLQCESCQLGKHVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPAIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKAKDKVMFKKKEGVPEGLYM