Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059017.t1 | XP_013468383.1 | 94.3 | 843 | 42 | 2 | 1 | 839 | 1 | 841 | 0.00E+00 | 1531.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059017.t1 | A0A072VWH9 | 94.3 | 843 | 42 | 2 | 1 | 839 | 1 | 841 | 0.0e+00 | 1531.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059017 | MS.gene24029 | 0.84054 | 8.18E-58 | -1.69E-46 |
| MS.gene059017 | MS.gene94801 | 0.813672 | 2.27E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059017.t1 | MTR_1g069190 | 94.425 | 843 | 41 | 2 | 1 | 839 | 1 | 841 | 0.0 | 1525 |
| MS.gene059017.t1 | MTR_7g099410 | 56.775 | 893 | 318 | 23 | 1 | 839 | 22 | 900 | 0.0 | 818 |
| MS.gene059017.t1 | MTR_7g099410 | 56.775 | 893 | 318 | 23 | 1 | 839 | 103 | 981 | 0.0 | 817 |
| MS.gene059017.t1 | MTR_1g067570 | 28.341 | 434 | 221 | 19 | 1 | 382 | 73 | 468 | 1.39e-17 | 88.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059017.t1 | AT4G28760 | 34.894 | 897 | 452 | 30 | 1 | 837 | 99 | 923 | 2.50e-117 | 378 |
| MS.gene059017.t1 | AT4G28760 | 34.894 | 897 | 452 | 30 | 1 | 837 | 99 | 923 | 2.50e-117 | 378 |
| MS.gene059017.t1 | AT5G43880 | 34.035 | 855 | 400 | 37 | 1 | 817 | 77 | 805 | 1.17e-84 | 288 |
| MS.gene059017.t1 | AT5G43880 | 34.035 | 855 | 400 | 37 | 1 | 817 | 77 | 805 | 1.17e-84 | 288 |
| MS.gene059017.t1 | AT5G43880 | 34.035 | 855 | 400 | 37 | 1 | 817 | 77 | 805 | 1.17e-84 | 288 |
| MS.gene059017.t1 | AT5G43880 | 34.035 | 855 | 400 | 37 | 1 | 817 | 77 | 805 | 1.17e-84 | 288 |
| MS.gene059017.t1 | AT2G20240 | 33.205 | 780 | 342 | 26 | 87 | 836 | 82 | 712 | 9.69e-84 | 283 |
| MS.gene059017.t1 | AT3G53540 | 34.524 | 168 | 94 | 5 | 1 | 162 | 72 | 229 | 3.27e-15 | 80.9 |
| MS.gene059017.t1 | AT3G53540 | 34.524 | 168 | 94 | 5 | 1 | 162 | 103 | 260 | 3.57e-15 | 80.5 |
Find 198 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGACATGTATGGTCATTT+AGG | 0.154963 | 1.2:-51995939 | MS.gene059017:CDS |
| CCTTATTCTACACAATCTTT+AGG | 0.208775 | 1.2:-51995093 | MS.gene059017:CDS |
| TCAAGAGGGTTCATGTTTAA+TGG | 0.218673 | 1.2:-51992875 | MS.gene059017:CDS |
| TAATGTAGTTGCTAAATTAA+TGG | 0.232485 | 1.2:-51996030 | MS.gene059017:CDS |
| TGGTGATTTGTCAATTAAAT+TGG | 0.255525 | 1.2:+51993326 | None:intergenic |
| TTGCTATTAATTCATTCATT+TGG | 0.255927 | 1.2:+51992839 | None:intergenic |
| AATGTAGTTGCTAAATTAAT+GGG | 0.258803 | 1.2:-51996029 | MS.gene059017:CDS |
| TTTGGCAATGACAAATCTTC+TGG | 0.278607 | 1.2:-51995537 | MS.gene059017:CDS |
| TTCCTTAGACACTAAGTTAG+AGG | 0.280175 | 1.2:-51993208 | MS.gene059017:CDS |
| CACCAATGCCAAGGCATTCT+TGG | 0.282646 | 1.2:-51995140 | MS.gene059017:CDS |
| CTTATTCTACACAATCTTTA+GGG | 0.283530 | 1.2:-51995092 | MS.gene059017:CDS |
| CAAATGGGATGAAGTTTGTT+TGG | 0.291147 | 1.2:-51992819 | MS.gene059017:CDS |
| AATTTAGCAACTACATTAGA+TGG | 0.294516 | 1.2:+51996035 | None:intergenic |
| GGAGATTCTAACACTGATAT+TGG | 0.294543 | 1.2:+51993715 | None:intergenic |
| TTCTCAGGCCTTCATGCATT+TGG | 0.296383 | 1.2:+51995265 | None:intergenic |
| CCTAAAGATTGTGTAGAATA+AGG | 0.296581 | 1.2:+51995093 | None:intergenic |
| ATCAAACCTTTGAAGATGTT+TGG | 0.307670 | 1.2:-51995555 | MS.gene059017:CDS |
| TGCTATTAATTCATTCATTT+GGG | 0.311745 | 1.2:+51992840 | None:intergenic |
| AGTAAGAAATCATCATTTAA+AGG | 0.317903 | 1.2:-51994682 | MS.gene059017:CDS |
| AACAAATGATCTTAAGGCTT+TGG | 0.324183 | 1.2:-51995382 | MS.gene059017:CDS |
| AATCTCTTTAGCCACTTCTA+TGG | 0.332582 | 1.2:+51995293 | None:intergenic |
| GTATGGGAGAACAGGAATTA+TGG | 0.340913 | 1.2:-51995456 | MS.gene059017:CDS |
| ATCCTCTAACTTAGTGTCTA+AGG | 0.342936 | 1.2:+51993206 | None:intergenic |
| CTTTGAGGCGATGGATTTGT+TGG | 0.343660 | 1.2:+51995354 | None:intergenic |
| AAGAATCTTCATCCCATGAT+AGG | 0.352056 | 1.2:+51993280 | None:intergenic |
| CTTCTCTTGGCCTCATTAAG+AGG | 0.356613 | 1.2:+51993027 | None:intergenic |
| TGACAAATCATATCATGATT+TGG | 0.357422 | 1.2:-51995172 | MS.gene059017:CDS |
| TAATCAACCTGTTCTGTGCT+TGG | 0.362030 | 1.2:+51995843 | None:intergenic |
| CTTCTAATCACCGATAAATT+CGG | 0.363877 | 1.2:+51995981 | None:intergenic |
| GTCATGACATCTAACGAAAA+AGG | 0.364074 | 1.2:-51995000 | MS.gene059017:CDS |
| ACTATCCATTAAAACCTCTA+AGG | 0.368536 | 1.2:-51993236 | MS.gene059017:CDS |
| GAGAATGGAGATTGATGCTT+TGG | 0.368829 | 1.2:-51992719 | MS.gene059017:CDS |
| ATGAATGAATTAATAGCAAA+TGG | 0.370571 | 1.2:-51992835 | MS.gene059017:CDS |
| AAGACATGTATGGTCATTTA+GGG | 0.374102 | 1.2:-51995938 | MS.gene059017:CDS |
| GAATAAAACTTCACATTCTT+CGG | 0.376331 | 1.2:-51995232 | MS.gene059017:CDS |
| TGTTTCGGTGGCAATAGTTT+CGG | 0.382934 | 1.2:+51994579 | None:intergenic |
| TCTAAGGAACAAGTCCTTAG+AGG | 0.385073 | 1.2:+51993222 | None:intergenic |
| AGAATGGAGATTGATGCTTT+GGG | 0.385840 | 1.2:-51992718 | MS.gene059017:CDS |
| CAAAGTTTCTATCAGAGAAA+TGG | 0.385972 | 1.2:-51995336 | MS.gene059017:CDS |
| AACATTGGAAAGTGGAAGAT+AGG | 0.388053 | 1.2:-51995905 | MS.gene059017:CDS |
| AAAAGGAGAGCCGAATTTAT+CGG | 0.390146 | 1.2:-51995991 | MS.gene059017:CDS |
| TTGGAAGTTGTTGGCTATGA+TGG | 0.400242 | 1.2:-51992952 | MS.gene059017:CDS |
| TTTCTCTGATAGAAACTTTG+AGG | 0.402390 | 1.2:+51995339 | None:intergenic |
| AAATGGGATGAAGTTTGTTT+GGG | 0.403555 | 1.2:-51992818 | MS.gene059017:CDS |
| TCATTTATGTCCCTCAATGA+TGG | 0.404068 | 1.2:+51993069 | None:intergenic |
| CATCTTCAAATTGCTTCGAT+TGG | 0.408190 | 1.2:+51995688 | None:intergenic |
| ACCAATGCCAAGGCATTCTT+GGG | 0.408772 | 1.2:-51995139 | MS.gene059017:CDS |
| TCCACTTTCCAATGTTTCAA+TGG | 0.409462 | 1.2:+51995912 | None:intergenic |
| TTGTGTTAATGCTGCACTAT+TGG | 0.418432 | 1.2:-51992971 | MS.gene059017:CDS |
| AAGCTCAAACAATGAACTCT+TGG | 0.423027 | 1.2:-51995652 | MS.gene059017:CDS |
| AGGAAAGAGGTTGTGCAGAG+TGG | 0.423258 | 1.2:-51992757 | MS.gene059017:CDS |
| TACTGATGGAACTGATGTTT+CGG | 0.425769 | 1.2:+51994564 | None:intergenic |
| GTAAGAAATCATCATTTAAA+GGG | 0.426376 | 1.2:-51994681 | MS.gene059017:CDS |
| ATGGGTCCAATGGGCTTTCA+AGG | 0.426820 | 1.2:+51993088 | None:intergenic |
| GGGTGGGGACAGTCACAGCC+TGG | 0.428898 | 1.2:-51992797 | MS.gene059017:CDS |
| ATTATGATCAAGCAGCTGTA+TGG | 0.429931 | 1.2:-51995473 | MS.gene059017:CDS |
| CCCTCAATGATGGGTCCAAT+GGG | 0.432400 | 1.2:+51993079 | None:intergenic |
| GTTCCATCAGTAAATTCATC+TGG | 0.434878 | 1.2:-51994553 | MS.gene059017:CDS |
| GTAAATTCATCTGGAGTCCT+TGG | 0.441528 | 1.2:-51994544 | MS.gene059017:CDS |
| AAGCAGCTGTATGGGAGAAC+AGG | 0.444633 | 1.2:-51995464 | MS.gene059017:CDS |
| TCATCATCCAAGCACAGAAC+AGG | 0.447661 | 1.2:-51995850 | MS.gene059017:CDS |
| GATGAAGTTTGTTTGGGGTG+GGG | 0.447920 | 1.2:-51992812 | MS.gene059017:CDS |
| TGGGAGAACAAATGATCTTA+AGG | 0.453216 | 1.2:-51995388 | MS.gene059017:CDS |
| TCATTTGTTCTCCCAGGACT+AGG | 0.456729 | 1.2:+51995396 | None:intergenic |
| GGATGAAGTTTGTTTGGGGT+GGG | 0.457347 | 1.2:-51992813 | MS.gene059017:CDS |
| TCCTTGGAATGCACGAAAGA+TGG | 0.457734 | 1.2:-51993664 | MS.gene059017:CDS |
| AGAAAATGTTGTTAGGAAAG+AGG | 0.458595 | 1.2:-51992770 | MS.gene059017:CDS |
| TGGTTGTAGAAAATGTTGTT+AGG | 0.459275 | 1.2:-51992777 | MS.gene059017:CDS |
| TGTGCAGAGTGGGTTGGTTG+AGG | 0.460054 | 1.2:-51992746 | MS.gene059017:CDS |
| GTCAAATGAGTTCTCATCAC+TGG | 0.460647 | 1.2:+51995191 | None:intergenic |
| CAATACAGCTCATGAATCCT+TGG | 0.464219 | 1.2:-51993680 | MS.gene059017:CDS |
| GGCTTTGACTCATTCAGTCC+AGG | 0.465246 | 1.2:+51993781 | None:intergenic |
| ACCACTATTCGAGTAGATTC+CGG | 0.465298 | 1.2:+51995426 | None:intergenic |
| CAGTGGCTAGGACCCTATCA+TGG | 0.471424 | 1.2:-51993293 | MS.gene059017:CDS |
| TCATAGACTGTTGAAGATGC+AGG | 0.472164 | 1.2:+51994769 | None:intergenic |
| AACGTGTTCTCCTGAGTCCT+CGG | 0.472642 | 1.2:-51995064 | MS.gene059017:CDS |
| GGGCTTGAAACCCTTTCAAA+AGG | 0.477681 | 1.2:-51996008 | MS.gene059017:CDS |
| GGAAAGAGGTTGTGCAGAGT+GGG | 0.478282 | 1.2:-51992756 | MS.gene059017:CDS |
| TACATTAGATGGACTGTGCT+TGG | 0.482853 | 1.2:+51996046 | None:intergenic |
| AGATAGGTTTATGATGGATG+AGG | 0.484563 | 1.2:-51995889 | MS.gene059017:CDS |
| GTGTCGAGAAACTCTACTTT+GGG | 0.485906 | 1.2:-51994958 | MS.gene059017:CDS |
| TCAATTAAATTGGACTTCAT+CGG | 0.485939 | 1.2:+51993336 | None:intergenic |
| TCCGGAATCTACTCGAATAG+TGG | 0.486429 | 1.2:-51995427 | MS.gene059017:CDS |
| CAAACAATGAACTCTTGGTC+AGG | 0.487112 | 1.2:-51995647 | MS.gene059017:CDS |
| GAACAGGTTGATTACAAAGA+TGG | 0.487334 | 1.2:-51995834 | MS.gene059017:CDS |
| AGTGGAAGATAGGTTTATGA+TGG | 0.488085 | 1.2:-51995895 | MS.gene059017:CDS |
| GAAGCAATTTGAAGATGCAT+TGG | 0.489886 | 1.2:-51995682 | MS.gene059017:CDS |
| TGTGTCGAGAAACTCTACTT+TGG | 0.491632 | 1.2:-51994959 | MS.gene059017:CDS |
| ACTGTTGAAGATGCAGGGTC+AGG | 0.493191 | 1.2:+51994775 | None:intergenic |
| TGAACCCTCTTGAACAAAGA+AGG | 0.493825 | 1.2:+51992885 | None:intergenic |
| TGATAGAAACTTTGAGGCGA+TGG | 0.494215 | 1.2:+51995345 | None:intergenic |
| CATTTATGTCCCTCAATGAT+GGG | 0.494789 | 1.2:+51993070 | None:intergenic |
| TTTGGAATCTCTGGCACCAA+GGG | 0.495428 | 1.2:+51993760 | None:intergenic |
| GAAAGAGTAAGAAGAAGGAT+AGG | 0.496544 | 1.2:-51995515 | MS.gene059017:CDS |
| CCCATTGGACCCATCATTGA+GGG | 0.497319 | 1.2:-51993079 | MS.gene059017:CDS |
| GGGATGAAGTTTGTTTGGGG+TGG | 0.498767 | 1.2:-51992814 | MS.gene059017:CDS |
| AGAAACGACTTTCTGAAAGA+TGG | 0.500107 | 1.2:-51995026 | MS.gene059017:CDS |
| GATTCTCCTCAAAACAATTG+TGG | 0.500159 | 1.2:-51994805 | MS.gene059017:CDS |
| TCCCAAGAATGCCTTGGCAT+TGG | 0.500183 | 1.2:+51995138 | None:intergenic |
| GTGGTATTGAAGCCTAGTCC+TGG | 0.500707 | 1.2:-51995408 | MS.gene059017:CDS |
| TTAAGATCATTTGTTCTCCC+AGG | 0.502592 | 1.2:+51995390 | None:intergenic |
| AGATGTTGATGAGGGGAAGA+TGG | 0.504294 | 1.2:-51995769 | MS.gene059017:CDS |
| TTCTACACAATCTTTAGGGC+GGG | 0.506332 | 1.2:-51995088 | MS.gene059017:CDS |
| TCCCTCAATGATGGGTCCAA+TGG | 0.507615 | 1.2:+51993078 | None:intergenic |
| GCTGTATTGTAATCTTCAAA+TGG | 0.510016 | 1.2:+51993694 | None:intergenic |
| GTTGGTTGAGGTTATGAGAA+TGG | 0.510683 | 1.2:-51992734 | MS.gene059017:CDS |
| TCAAATTCCCTCTACTCCAC+AGG | 0.512881 | 1.2:-51995601 | MS.gene059017:CDS |
| ATTCTCCTCAAAACAATTGT+GGG | 0.513750 | 1.2:-51994804 | MS.gene059017:CDS |
| ACCATCTTTCGTGCATTCCA+AGG | 0.518813 | 1.2:+51993663 | None:intergenic |
| AATAAGGACTGCCACATACA+TGG | 0.520139 | 1.2:+51995109 | None:intergenic |
| TAGGGTGGCCATTGAAACAT+TGG | 0.520221 | 1.2:-51995920 | MS.gene059017:CDS |
| GCTGCACTATTGGAAGTTGT+TGG | 0.521163 | 1.2:-51992961 | MS.gene059017:CDS |
| GATTATTATCAAGACATGTA+TGG | 0.523774 | 1.2:-51995948 | MS.gene059017:CDS |
| TGAATGAATTAATAGCAAAT+GGG | 0.524504 | 1.2:-51992834 | MS.gene059017:CDS |
| TTATGATCAAGCAGCTGTAT+GGG | 0.524672 | 1.2:-51995472 | MS.gene059017:CDS |
| GATAGGTTTATGATGGATGA+GGG | 0.530714 | 1.2:-51995888 | MS.gene059017:CDS |
| TGGAGGGAAGATGTTGATGA+GGG | 0.531365 | 1.2:-51995777 | MS.gene059017:CDS |
| CTCATCACTGGAATAGCCAC+TGG | 0.537890 | 1.2:+51995203 | None:intergenic |
| CTAGCCACTGATTCTATATG+TGG | 0.540349 | 1.2:+51993306 | None:intergenic |
| TTCTGGAAAGAGTAAGAAGA+AGG | 0.543740 | 1.2:-51995520 | MS.gene059017:CDS |
| TCATTGCCAAACATCTTCAA+AGG | 0.543744 | 1.2:+51995549 | None:intergenic |
| TCTCAAAGCTTCAATGTTGG+TGG | 0.547700 | 1.2:-51994511 | MS.gene059017:CDS |
| GCTTTGGGGAGGGAAATAGA+AGG | 0.550557 | 1.2:-51992703 | MS.gene059017:CDS |
| GGAGATTGATGCTTTGGGGA+GGG | 0.550626 | 1.2:-51992713 | MS.gene059017:CDS |
| CTGTACTCAGCCTCTTAATG+AGG | 0.553577 | 1.2:-51993037 | MS.gene059017:CDS |
| GTATTCCCTTGAAAGCCCAT+TGG | 0.555850 | 1.2:-51993094 | MS.gene059017:CDS |
| TGCATCATCCTGTGGAGTAG+AGG | 0.559463 | 1.2:+51995593 | None:intergenic |
| GCATCATCCTGTGGAGTAGA+GGG | 0.559621 | 1.2:+51995594 | None:intergenic |
| ATGTTGCAGATTTCTTTACA+AGG | 0.559791 | 1.2:+51994917 | None:intergenic |
| CATTCTTCGGTATTCTCCAG+TGG | 0.563247 | 1.2:-51995219 | MS.gene059017:CDS |
| TGGGATTGCATCCATGTATG+TGG | 0.563606 | 1.2:-51995120 | MS.gene059017:CDS |
| AAGGCCCTTCTTTGTTCAAG+AGG | 0.564043 | 1.2:-51992890 | MS.gene059017:CDS |
| AGGCCCTTCTTTGTTCAAGA+GGG | 0.565387 | 1.2:-51992889 | MS.gene059017:CDS |
| GTGGAGGGAAGATGTTGATG+AGG | 0.565512 | 1.2:-51995778 | MS.gene059017:CDS |
| ATGTTTAATGGACCACATTG+TGG | 0.570896 | 1.2:-51992863 | MS.gene059017:CDS |
| GCCCATTGGACCCATCATTG+AGG | 0.570908 | 1.2:-51993080 | MS.gene059017:CDS |
| TGGAGATTGATGCTTTGGGG+AGG | 0.573132 | 1.2:-51992714 | MS.gene059017:CDS |
| AGAATCTTCATCCCATGATA+GGG | 0.573830 | 1.2:+51993281 | None:intergenic |
| CTCTTAATGAGGCCAAGAGA+AGG | 0.573920 | 1.2:-51993026 | MS.gene059017:CDS |
| ATGACTCATTTCACACAAGA+TGG | 0.574580 | 1.2:-51993116 | MS.gene059017:CDS |
| GCCATTGAAACATTGGAAAG+TGG | 0.577706 | 1.2:-51995913 | MS.gene059017:CDS |
| AGAGGTTGTGCAGAGTGGGT+TGG | 0.578519 | 1.2:-51992752 | MS.gene059017:CDS |
| GAACCCTCTTGAACAAAGAA+GGG | 0.579700 | 1.2:+51992886 | None:intergenic |
| GGATGCAATCTCAGAGAGGA+AGG | 0.583915 | 1.2:-51995800 | MS.gene059017:CDS |
| TCTATGCACACCGAGGACTC+AGG | 0.584334 | 1.2:+51995054 | None:intergenic |
| ACTCCAGATGAATTTACTGA+TGG | 0.584574 | 1.2:+51994550 | None:intergenic |
| AGTCTCTAGTGAACCACAAG+AGG | 0.584725 | 1.2:-51994455 | MS.gene059017:CDS |
| CAGGAATTATGGATACTCTC+CGG | 0.585899 | 1.2:-51995445 | MS.gene059017:CDS |
| ATGCAATCCCAAGAATGCCT+TGG | 0.586761 | 1.2:+51995132 | None:intergenic |
| ATCTCAGAGAGGAAGGTGGA+GGG | 0.587948 | 1.2:-51995793 | MS.gene059017:CDS |
| GAACAAAGAAGGGCCTTCTG+TGG | 0.587999 | 1.2:+51992896 | None:intergenic |
| AACAAAGAAGGGCCTTCTGT+GGG | 0.588640 | 1.2:+51992897 | None:intergenic |
| TGTGCAGTGGGACCCACAGA+AGG | 0.588825 | 1.2:-51992909 | MS.gene059017:CDS |
| AGTGGCTAGGACCCTATCAT+GGG | 0.590425 | 1.2:-51993292 | MS.gene059017:CDS |
| AATCTCAGAGAGGAAGGTGG+AGG | 0.592424 | 1.2:-51995794 | MS.gene059017:CDS |
| ATTTGGAATCTCTGGCACCA+AGG | 0.593391 | 1.2:+51993759 | None:intergenic |
| TGTACTTGAATCCATAGAAG+TGG | 0.594058 | 1.2:-51995304 | MS.gene059017:CDS |
| TGGTATTGAAGCCTAGTCCT+GGG | 0.594500 | 1.2:-51995407 | MS.gene059017:CDS |
| TCATGGGATGAAGATTCTTG+TGG | 0.595361 | 1.2:-51993276 | MS.gene059017:CDS |
| ACTGAATGAGTCAAAGCCCT+TGG | 0.595715 | 1.2:-51993776 | MS.gene059017:CDS |
| AGGCCAAGAGAAGGAAAATG+AGG | 0.596909 | 1.2:-51993017 | MS.gene059017:CDS |
| GCATCATCAACACCGAGGCT+AGG | 0.600474 | 1.2:+51994745 | None:intergenic |
| TTTGAGACACATTATCTCCA+AGG | 0.601654 | 1.2:+51994527 | None:intergenic |
| CATTCATTTGGGCCACAATG+TGG | 0.603105 | 1.2:+51992851 | None:intergenic |
| TGAGTCCTCGGTGTGCATAG+AGG | 0.603550 | 1.2:-51995052 | MS.gene059017:CDS |
| ATGTAGTTGCTAAATTAATG+GGG | 0.607079 | 1.2:-51996028 | MS.gene059017:CDS |
| TCACAAAGAACATGGCTCCA+AGG | 0.608900 | 1.2:-51994722 | MS.gene059017:CDS |
| TGTTGCAGATTTCTTTACAA+GGG | 0.609571 | 1.2:+51994918 | None:intergenic |
| TGGGTCCAATGGGCTTTCAA+GGG | 0.610068 | 1.2:+51993089 | None:intergenic |
| ATTACACTCCAAATGCATGA+AGG | 0.610756 | 1.2:-51995273 | MS.gene059017:CDS |
| ACAGTCTATGAACCTAGCCT+CGG | 0.617926 | 1.2:-51994757 | MS.gene059017:CDS |
| CATAGACTGTTGAAGATGCA+GGG | 0.622353 | 1.2:+51994770 | None:intergenic |
| TCTAACACTGATATTGGACT+AGG | 0.624156 | 1.2:+51993721 | None:intergenic |
| ATCACCACATATAGAATCAG+TGG | 0.630942 | 1.2:-51993310 | MS.gene059017:CDS |
| CACATATAGAATCAGTGGCT+AGG | 0.630949 | 1.2:-51993305 | MS.gene059017:CDS |
| AATTACTTCAAGATGTGCAG+TGG | 0.633827 | 1.2:-51992922 | MS.gene059017:CDS |
| GGAGGGAAGATGTTGATGAG+GGG | 0.637253 | 1.2:-51995776 | MS.gene059017:CDS |
| ATTACTTCAAGATGTGCAGT+GGG | 0.638167 | 1.2:-51992921 | MS.gene059017:CDS |
| ATGCACGAAAGATGGTCACA+TGG | 0.639883 | 1.2:-51993656 | MS.gene059017:CDS |
| ATTCTACACAATCTTTAGGG+CGG | 0.643315 | 1.2:-51995089 | MS.gene059017:CDS |
| AAGCTATGTCACCAATGCCA+AGG | 0.643366 | 1.2:-51995149 | MS.gene059017:CDS |
| TGCAATCTCAGAGAGGAAGG+TGG | 0.652012 | 1.2:-51995797 | MS.gene059017:CDS |
| TGCACGAAAGATGGTCACAT+GGG | 0.654570 | 1.2:-51993655 | MS.gene059017:intron |
| GAATGGAGATTGATGCTTTG+GGG | 0.655462 | 1.2:-51992717 | MS.gene059017:CDS |
| ACATGTATGGTCATTTAGGG+TGG | 0.658765 | 1.2:-51995935 | MS.gene059017:CDS |
| ACAAAGATGGATATGAAACA+TGG | 0.662592 | 1.2:-51995821 | MS.gene059017:CDS |
| AATGGGATGAAGTTTGTTTG+GGG | 0.665298 | 1.2:-51992817 | MS.gene059017:CDS |
| GTGTCTCAAAGCTTCAATGT+TGG | 0.674820 | 1.2:-51994514 | MS.gene059017:CDS |
| ATGTGATTTGCATCATCCTG+TGG | 0.677544 | 1.2:+51995585 | None:intergenic |
| TGATGGAACTGATGTTTCGG+TGG | 0.677793 | 1.2:+51994567 | None:intergenic |
| AGTGTGATCATGTCCTCTTG+TGG | 0.683426 | 1.2:+51994442 | None:intergenic |
| GAGGGACATAAATGACAACA+AGG | 0.687568 | 1.2:-51993061 | MS.gene059017:CDS |
| AGAGGACATGATCACACTAG+AGG | 0.690396 | 1.2:-51994437 | MS.gene059017:intron |
| GATGATGCTCACAAAGAACA+TGG | 0.702506 | 1.2:-51994730 | MS.gene059017:CDS |
| CAAAGAACATGGCTCCAAGG+TGG | 0.704136 | 1.2:-51994719 | MS.gene059017:CDS |
| CTTTGCCTCTATGCACACCG+AGG | 0.706128 | 1.2:+51995047 | None:intergenic |
| ACATGGATGCAATCTCAGAG+AGG | 0.725851 | 1.2:-51995804 | MS.gene059017:CDS |
| TGTGAGCATCATCAACACCG+AGG | 0.796608 | 1.2:+51994740 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATTAATTCCATTAATT+AGG | + | chr1.2:51994492-51994511 | None:intergenic | 10.0% |
| !!! | ATAAAACAAGTTTTTATCAA+GGG | + | chr1.2:51994681-51994700 | None:intergenic | 15.0% |
| !!! | TATAAAACAAGTTTTTATCA+AGG | + | chr1.2:51994682-51994701 | None:intergenic | 15.0% |
| !! | AAACAAATCAAAGATTTCAT+TGG | + | chr1.2:51994902-51994921 | None:intergenic | 20.0% |
| !! | AATGTAGTTGCTAAATTAAT+GGG | - | chr1.2:51992684-51992703 | MS.gene059017:CDS | 20.0% |
| !! | AGATAAAAGATCCTAAATAA+TGG | + | chr1.2:51994412-51994431 | None:intergenic | 20.0% |
| !! | AGTAAGAAATCATCATTTAA+AGG | - | chr1.2:51994031-51994050 | MS.gene059017:intron | 20.0% |
| !! | ATGAATGAATTAATAGCAAA+TGG | - | chr1.2:51995878-51995897 | MS.gene059017:CDS | 20.0% |
| !! | GTAAGAAATCATCATTTAAA+GGG | - | chr1.2:51994032-51994051 | MS.gene059017:intron | 20.0% |
| !! | TAATGTAGTTGCTAAATTAA+TGG | - | chr1.2:51992683-51992702 | MS.gene059017:CDS | 20.0% |
| !! | TCTTCTAGTGATATTTATTT+AGG | - | chr1.2:51994369-51994388 | MS.gene059017:intron | 20.0% |
| !! | TGAATGAATTAATAGCAAAT+GGG | - | chr1.2:51995879-51995898 | MS.gene059017:CDS | 20.0% |
| !! | TGCTATTAATTCATTCATTT+GGG | + | chr1.2:51995876-51995895 | None:intergenic | 20.0% |
| !! | TTCAAACTTAACCATTATTT+AGG | - | chr1.2:51994398-51994417 | MS.gene059017:intron | 20.0% |
| !!! | ATAATGGTTAAGTTTGAAAT+AGG | + | chr1.2:51994396-51994415 | None:intergenic | 20.0% |
| !!! | ATTGAGTTTTGCTTATATTT+TGG | - | chr1.2:51994786-51994805 | MS.gene059017:CDS | 20.0% |
| !!! | CTTGATAATAATCTTTTGTT+TGG | + | chr1.2:51992758-51992777 | None:intergenic | 20.0% |
| !!! | TTGCTATTAATTCATTCATT+TGG | + | chr1.2:51995877-51995896 | None:intergenic | 20.0% |
| ! | AACTCAAGATTTCACAATTA+TGG | + | chr1.2:51994448-51994467 | None:intergenic | 25.0% |
| ! | AATTTAGCAACTACATTAGA+TGG | + | chr1.2:51992681-51992700 | None:intergenic | 25.0% |
| ! | ATGTAGTTGCTAAATTAATG+GGG | - | chr1.2:51992685-51992704 | MS.gene059017:CDS | 25.0% |
| ! | CTTATTCTACACAATCTTTA+GGG | - | chr1.2:51993621-51993640 | MS.gene059017:intron | 25.0% |
| ! | GAATAAAACTTCACATTCTT+CGG | - | chr1.2:51993481-51993500 | MS.gene059017:intron | 25.0% |
| ! | GATTATTATCAAGACATGTA+TGG | - | chr1.2:51992765-51992784 | MS.gene059017:CDS | 25.0% |
| ! | TAAAAATGTCTGACTTCTAT+CGG | - | chr1.2:51995235-51995254 | MS.gene059017:CDS | 25.0% |
| ! | TAGAAAGTAGCAAATAGTTA+AGG | + | chr1.2:51995154-51995173 | None:intergenic | 25.0% |
| ! | TATTACACCAAAAAAACTAG+AGG | + | chr1.2:51994635-51994654 | None:intergenic | 25.0% |
| ! | TCAAAGATTTCATTGGTATA+TGG | + | chr1.2:51994895-51994914 | None:intergenic | 25.0% |
| ! | TCAATTAAATTGGACTTCAT+CGG | + | chr1.2:51995380-51995399 | None:intergenic | 25.0% |
| ! | TGACAAATCATATCATGATT+TGG | - | chr1.2:51993541-51993560 | MS.gene059017:intron | 25.0% |
| ! | TTCCAAATGAAAAACAAGAT+CGG | - | chr1.2:51994969-51994988 | MS.gene059017:CDS | 25.0% |
| ! | TTTATCAAATAAGAGCTTCT+TGG | + | chr1.2:51995128-51995147 | None:intergenic | 25.0% |
| !! | GTCAGACATTTTTAATGATT+TGG | + | chr1.2:51995229-51995248 | None:intergenic | 25.0% |
| !! | TGGTGATTTGTCAATTAAAT+TGG | + | chr1.2:51995390-51995409 | None:intergenic | 25.0% |
| !!! | AGATGAACTAGATTTTTTCT+TGG | + | chr1.2:51994098-51994117 | None:intergenic | 25.0% |
| !!! | ATGCTCATTTTTTCTTTGAA+AGG | + | chr1.2:51993884-51993903 | None:intergenic | 25.0% |
| AAAAAGGTCATCAAGAACAA+AGG | - | chr1.2:51993729-51993748 | MS.gene059017:CDS | 30.0% | |
| AAAGACACTGATAAAGAAAG+AGG | + | chr1.2:51995100-51995119 | None:intergenic | 30.0% | |
| AACAAATGATCTTAAGGCTT+TGG | - | chr1.2:51993331-51993350 | MS.gene059017:CDS | 30.0% | |
| AAGACATGTATGGTCATTTA+GGG | - | chr1.2:51992775-51992794 | MS.gene059017:CDS | 30.0% | |
| ACAAAGATGGATATGAAACA+TGG | - | chr1.2:51992892-51992911 | MS.gene059017:CDS | 30.0% | |
| ACTAAAAAACCCTATGTTTG+TGG | + | chr1.2:51994858-51994877 | None:intergenic | 30.0% | |
| ACTATCCATTAAAACCTCTA+AGG | - | chr1.2:51995477-51995496 | MS.gene059017:CDS | 30.0% | |
| AGAAAATGTTGTTAGGAAAG+AGG | - | chr1.2:51995943-51995962 | MS.gene059017:CDS | 30.0% | |
| ATGTTGCAGATTTCTTTACA+AGG | + | chr1.2:51993799-51993818 | None:intergenic | 30.0% | |
| ATTCTCCTCAAAACAATTGT+GGG | - | chr1.2:51993909-51993928 | MS.gene059017:intron | 30.0% | |
| CAAAGTTTCTATCAGAGAAA+TGG | - | chr1.2:51993377-51993396 | MS.gene059017:intron | 30.0% | |
| CCTAAAGATTGTGTAGAATA+AGG | + | chr1.2:51993623-51993642 | None:intergenic | 30.0% | |
| CCTTATTCTACACAATCTTT+AGG | - | chr1.2:51993620-51993639 | MS.gene059017:intron | 30.0% | |
| CTTCTAATCACCGATAAATT+CGG | + | chr1.2:51992735-51992754 | None:intergenic | 30.0% | |
| GCTGTATTGTAATCTTCAAA+TGG | + | chr1.2:51995022-51995041 | None:intergenic | 30.0% | |
| GTCACTCGGATAATAATAAT+AGG | + | chr1.2:51995327-51995346 | None:intergenic | 30.0% | |
| TAATATATCCTTCTGTGTGT+TGG | - | chr1.2:51994504-51994523 | MS.gene059017:CDS | 30.0% | |
| TCTCTTCTCTTCCTAATTAA+TGG | - | chr1.2:51994478-51994497 | MS.gene059017:CDS | 30.0% | |
| TGGTTGTAGAAAATGTTGTT+AGG | - | chr1.2:51995936-51995955 | MS.gene059017:CDS | 30.0% | |
| TGTTGCAGATTTCTTTACAA+GGG | + | chr1.2:51993798-51993817 | None:intergenic | 30.0% | |
| TTTCTCTGATAGAAACTTTG+AGG | + | chr1.2:51993377-51993396 | None:intergenic | 30.0% | |
| ! | AAATGGGATGAAGTTTGTTT+GGG | - | chr1.2:51995895-51995914 | MS.gene059017:CDS | 30.0% |
| ! | ACAAAATGTTTGGAGTTTGA+TGG | + | chr1.2:51994813-51994832 | None:intergenic | 30.0% |
| ! | ATCAAACCTTTGAAGATGTT+TGG | - | chr1.2:51993158-51993177 | MS.gene059017:CDS | 30.0% |
| ! | CAGATTTTCTTTGTTCTTCT+TGG | + | chr1.2:51993847-51993866 | None:intergenic | 30.0% |
| ! | TAACAACATTTTCTACAACC+AGG | + | chr1.2:51995937-51995956 | None:intergenic | 30.0% |
| ! | TTTTGTATGTATAGGATCAC+TGG | - | chr1.2:51995352-51995371 | MS.gene059017:CDS | 30.0% |
| !! | AGAGGTTTTAATGGATAGTA+AGG | + | chr1.2:51995476-51995495 | None:intergenic | 30.0% |
| !! | TATTCTTTTGATAGCTTCTC+AGG | + | chr1.2:51993466-51993485 | None:intergenic | 30.0% |
| !! | TGTTTTTCATTTGGAATCTC+TGG | + | chr1.2:51994965-51994984 | None:intergenic | 30.0% |
| !!! | ACAATCTCCTCTAGTTTTTT+TGG | - | chr1.2:51994625-51994644 | MS.gene059017:CDS | 30.0% |
| !!! | AGTTTTTATCAAGGGCATTT+TGG | + | chr1.2:51994673-51994692 | None:intergenic | 30.0% |
| !!! | GACACTTGTTTTGTATGTAT+AGG | - | chr1.2:51995344-51995363 | MS.gene059017:CDS | 30.0% |
| AAAAGGAGAGCCGAATTTAT+CGG | - | chr1.2:51992722-51992741 | MS.gene059017:CDS | 35.0% | |
| AACATTGGAAAGTGGAAGAT+AGG | - | chr1.2:51992808-51992827 | MS.gene059017:CDS | 35.0% | |
| AAGAATCTTCATCCCATGAT+AGG | + | chr1.2:51995436-51995455 | None:intergenic | 35.0% | |
| AAGCTCAAACAATGAACTCT+TGG | - | chr1.2:51993061-51993080 | MS.gene059017:CDS | 35.0% | |
| AATCTCTTTAGCCACTTCTA+TGG | + | chr1.2:51993423-51993442 | None:intergenic | 35.0% | |
| AATTACTTCAAGATGTGCAG+TGG | - | chr1.2:51995791-51995810 | MS.gene059017:CDS | 35.0% | |
| ACCAATCATACATGTGACTT+TGG | + | chr1.2:51995269-51995288 | None:intergenic | 35.0% | |
| ACTCCAGATGAATTTACTGA+TGG | + | chr1.2:51994166-51994185 | None:intergenic | 35.0% | |
| AGAATCTTCATCCCATGATA+GGG | + | chr1.2:51995435-51995454 | None:intergenic | 35.0% | |
| AGAATGGAGATTGATGCTTT+GGG | - | chr1.2:51995995-51996014 | MS.gene059017:CDS | 35.0% | |
| AGTGGAAGATAGGTTTATGA+TGG | - | chr1.2:51992818-51992837 | MS.gene059017:CDS | 35.0% | |
| ATCACCACATATAGAATCAG+TGG | - | chr1.2:51995403-51995422 | MS.gene059017:CDS | 35.0% | |
| ATCCTCTAACTTAGTGTCTA+AGG | + | chr1.2:51995510-51995529 | None:intergenic | 35.0% | |
| ATGACTCATTTCACACAAGA+TGG | - | chr1.2:51995597-51995616 | MS.gene059017:CDS | 35.0% | |
| ATTACACTCCAAATGCATGA+AGG | - | chr1.2:51993440-51993459 | MS.gene059017:intron | 35.0% | |
| ATTACTTCAAGATGTGCAGT+GGG | - | chr1.2:51995792-51995811 | MS.gene059017:CDS | 35.0% | |
| ATTATGATCAAGCAGCTGTA+TGG | - | chr1.2:51993240-51993259 | MS.gene059017:CDS | 35.0% | |
| CAAAAACTACTATCAGCATC+TGG | - | chr1.2:51995551-51995570 | MS.gene059017:CDS | 35.0% | |
| CAAATAAGAGCTTCTTGGAA+TGG | + | chr1.2:51995123-51995142 | None:intergenic | 35.0% | |
| CAAGACATGTATGGTCATTT+AGG | - | chr1.2:51992774-51992793 | MS.gene059017:CDS | 35.0% | |
| CACTGATAAAGAAAGAGGTA+AGG | + | chr1.2:51995095-51995114 | None:intergenic | 35.0% | |
| CATCTTCAAATTGCTTCGAT+TGG | + | chr1.2:51993028-51993047 | None:intergenic | 35.0% | |
| CATTTATGTCCCTCAATGAT+GGG | + | chr1.2:51995646-51995665 | None:intergenic | 35.0% | |
| GAAAGAGTAAGAAGAAGGAT+AGG | - | chr1.2:51993198-51993217 | MS.gene059017:CDS | 35.0% | |
| GAAGCAATTTGAAGATGCAT+TGG | - | chr1.2:51993031-51993050 | MS.gene059017:CDS | 35.0% | |
| GATTCTCCTCAAAACAATTG+TGG | - | chr1.2:51993908-51993927 | MS.gene059017:intron | 35.0% | |
| GGAGATTCTAACACTGATAT+TGG | + | chr1.2:51995001-51995020 | None:intergenic | 35.0% | |
| GTCATGACATCTAACGAAAA+AGG | - | chr1.2:51993713-51993732 | MS.gene059017:CDS | 35.0% | |
| GTTCCATCAGTAAATTCATC+TGG | - | chr1.2:51994160-51994179 | MS.gene059017:intron | 35.0% | |
| TACAGACTTCCACAAACATA+GGG | - | chr1.2:51994846-51994865 | MS.gene059017:CDS | 35.0% | |
| TACTGATGGAACTGATGTTT+CGG | + | chr1.2:51994152-51994171 | None:intergenic | 35.0% | |
| TCAAGAGGGTTCATGTTTAA+TGG | - | chr1.2:51995838-51995857 | MS.gene059017:CDS | 35.0% | |
| TCATTGCCAAACATCTTCAA+AGG | + | chr1.2:51993167-51993186 | None:intergenic | 35.0% | |
| TCATTTATGTCCCTCAATGA+TGG | + | chr1.2:51995647-51995666 | None:intergenic | 35.0% | |
| TCCAAAGTCACATGTATGAT+TGG | - | chr1.2:51995265-51995284 | MS.gene059017:CDS | 35.0% | |
| TCCACTTTCCAATGTTTCAA+TGG | + | chr1.2:51992804-51992823 | None:intergenic | 35.0% | |
| TCTAACACTGATATTGGACT+AGG | + | chr1.2:51994995-51995014 | None:intergenic | 35.0% | |
| TGGGAGAACAAATGATCTTA+AGG | - | chr1.2:51993325-51993344 | MS.gene059017:CDS | 35.0% | |
| TGTACTTGAATCCATAGAAG+TGG | - | chr1.2:51993409-51993428 | MS.gene059017:intron | 35.0% | |
| TTAAGATCATTTGTTCTCCC+AGG | + | chr1.2:51993326-51993345 | None:intergenic | 35.0% | |
| TTATGATCAAGCAGCTGTAT+GGG | - | chr1.2:51993241-51993260 | MS.gene059017:CDS | 35.0% | |
| TTCAGACCACACAAAATGTT+TGG | + | chr1.2:51994823-51994842 | None:intergenic | 35.0% | |
| TTCCTTAGACACTAAGTTAG+AGG | - | chr1.2:51995505-51995524 | MS.gene059017:CDS | 35.0% | |
| TTGTGTTAATGCTGCACTAT+TGG | - | chr1.2:51995742-51995761 | MS.gene059017:CDS | 35.0% | |
| TTTGGCAATGACAAATCTTC+TGG | - | chr1.2:51993176-51993195 | MS.gene059017:CDS | 35.0% | |
| ! | AATCTTGTGCTCGATTTTAC+AGG | - | chr1.2:51996058-51996077 | MS.gene059017:CDS | 35.0% |
| ! | AATGGGATGAAGTTTGTTTG+GGG | - | chr1.2:51995896-51995915 | MS.gene059017:CDS | 35.0% |
| ! | ACTTTTCTTAGTCAGCACAT+TGG | - | chr1.2:51994594-51994613 | MS.gene059017:CDS | 35.0% |
| ! | AGAAACGACTTTCTGAAAGA+TGG | - | chr1.2:51993687-51993706 | MS.gene059017:CDS | 35.0% |
| ! | ATGTTTAATGGACCACATTG+TGG | - | chr1.2:51995850-51995869 | MS.gene059017:CDS | 35.0% |
| ! | ATTCTACACAATCTTTAGGG+CGG | - | chr1.2:51993624-51993643 | MS.gene059017:intron | 35.0% |
| ! | CAAACTCCAAACATTTTGTG+TGG | - | chr1.2:51994814-51994833 | MS.gene059017:CDS | 35.0% |
| ! | CAAATGGGATGAAGTTTGTT+TGG | - | chr1.2:51995894-51995913 | MS.gene059017:CDS | 35.0% |
| ! | CAGATGCTGATAGTAGTTTT+TGG | + | chr1.2:51995553-51995572 | None:intergenic | 35.0% |
| ! | CATACAAAACAAGTGTCACT+CGG | + | chr1.2:51995341-51995360 | None:intergenic | 35.0% |
| ! | GCTGCTTGATCATAATTTTC+TGG | + | chr1.2:51993236-51993255 | None:intergenic | 35.0% |
| ! | TTCTGGAAAGAGTAAGAAGA+AGG | - | chr1.2:51993193-51993212 | MS.gene059017:CDS | 35.0% |
| ! | TTTGAGACACATTATCTCCA+AGG | + | chr1.2:51994189-51994208 | None:intergenic | 35.0% |
| !! | AGATAGGTTTATGATGGATG+AGG | - | chr1.2:51992824-51992843 | MS.gene059017:CDS | 35.0% |
| !! | ATTTGTTTGTTTTCACAGCC+TGG | - | chr1.2:51994914-51994933 | MS.gene059017:CDS | 35.0% |
| !! | CAAGTCCTTAGAGGTTTTAA+TGG | + | chr1.2:51995485-51995504 | None:intergenic | 35.0% |
| !! | GAACAGGTTGATTACAAAGA+TGG | - | chr1.2:51992879-51992898 | MS.gene059017:CDS | 35.0% |
| !! | GATAGGTTTATGATGGATGA+GGG | - | chr1.2:51992825-51992844 | MS.gene059017:CDS | 35.0% |
| !!! | GTGCTTGGAGTTTTTTTCTT+TGG | + | chr1.2:51992655-51992674 | None:intergenic | 35.0% |
| AATAAGGACTGCCACATACA+TGG | + | chr1.2:51993607-51993626 | None:intergenic | 40.0% | |
| ACATGTATGGTCATTTAGGG+TGG | - | chr1.2:51992778-51992797 | MS.gene059017:CDS | 40.0% | |
| ACCACTATTCGAGTAGATTC+CGG | + | chr1.2:51993290-51993309 | None:intergenic | 40.0% | |
| ACTAGAGGAGATTGTCTACT+AGG | + | chr1.2:51994620-51994639 | None:intergenic | 40.0% | |
| CAAACAATGAACTCTTGGTC+AGG | - | chr1.2:51993066-51993085 | MS.gene059017:CDS | 40.0% | |
| CAATACAGCTCATGAATCCT+TGG | - | chr1.2:51995033-51995052 | MS.gene059017:CDS | 40.0% | |
| CACATATAGAATCAGTGGCT+AGG | - | chr1.2:51995408-51995427 | MS.gene059017:CDS | 40.0% | |
| CAGGAATTATGGATACTCTC+CGG | - | chr1.2:51993268-51993287 | MS.gene059017:CDS | 40.0% | |
| CATAGACTGTTGAAGATGCA+GGG | + | chr1.2:51993946-51993965 | None:intergenic | 40.0% | |
| CTACAGACTTCCACAAACAT+AGG | - | chr1.2:51994845-51994864 | MS.gene059017:CDS | 40.0% | |
| GAACCCTCTTGAACAAAGAA+GGG | + | chr1.2:51995830-51995849 | None:intergenic | 40.0% | |
| GAATGGAGATTGATGCTTTG+GGG | - | chr1.2:51995996-51996015 | MS.gene059017:CDS | 40.0% | |
| GAGAATGGAGATTGATGCTT+TGG | - | chr1.2:51995994-51996013 | MS.gene059017:CDS | 40.0% | |
| GAGGGACATAAATGACAACA+AGG | - | chr1.2:51995652-51995671 | MS.gene059017:CDS | 40.0% | |
| GATGATGCTCACAAAGAACA+TGG | - | chr1.2:51993983-51994002 | MS.gene059017:intron | 40.0% | |
| GCCATTGAAACATTGGAAAG+TGG | - | chr1.2:51992800-51992819 | MS.gene059017:CDS | 40.0% | |
| GTATGGGAGAACAGGAATTA+TGG | - | chr1.2:51993257-51993276 | MS.gene059017:CDS | 40.0% | |
| GTCAAATGAGTTCTCATCAC+TGG | + | chr1.2:51993525-51993544 | None:intergenic | 40.0% | |
| GTGTCGAGAAACTCTACTTT+GGG | - | chr1.2:51993755-51993774 | MS.gene059017:CDS | 40.0% | |
| GTGTCTCAAAGCTTCAATGT+TGG | - | chr1.2:51994199-51994218 | MS.gene059017:intron | 40.0% | |
| GTTGGTTGAGGTTATGAGAA+TGG | - | chr1.2:51995979-51995998 | MS.gene059017:CDS | 40.0% | |
| TAATCAACCTGTTCTGTGCT+TGG | + | chr1.2:51992873-51992892 | None:intergenic | 40.0% | |
| TAGGAAGAGAAGAGACAGAT+AGG | + | chr1.2:51994473-51994492 | None:intergenic | 40.0% | |
| TATCCTTCTGTGTGTTGGAA+TGG | - | chr1.2:51994509-51994528 | MS.gene059017:CDS | 40.0% | |
| TCATAGACTGTTGAAGATGC+AGG | + | chr1.2:51993947-51993966 | None:intergenic | 40.0% | |
| TCATGGGATGAAGATTCTTG+TGG | - | chr1.2:51995437-51995456 | MS.gene059017:CDS | 40.0% | |
| TCTAAGGAACAAGTCCTTAG+AGG | + | chr1.2:51995494-51995513 | None:intergenic | 40.0% | |
| TCTCAAAGCTTCAATGTTGG+TGG | - | chr1.2:51994202-51994221 | MS.gene059017:intron | 40.0% | |
| TGAACCCTCTTGAACAAAGA+AGG | + | chr1.2:51995831-51995850 | None:intergenic | 40.0% | |
| TGGTCACATGGGTAATACTT+AGG | - | chr1.2:51995069-51995088 | MS.gene059017:CDS | 40.0% | |
| TGTGTCGAGAAACTCTACTT+TGG | - | chr1.2:51993754-51993773 | MS.gene059017:CDS | 40.0% | |
| TGTTTCGGTGGCAATAGTTT+CGG | + | chr1.2:51994137-51994156 | None:intergenic | 40.0% | |
| ! | AATTCGGCTCTCCTTTTGAA+AGG | + | chr1.2:51992719-51992738 | None:intergenic | 40.0% |
| ! | ATGTGATTTGCATCATCCTG+TGG | + | chr1.2:51993131-51993150 | None:intergenic | 40.0% |
| ! | GTAAATTCATCTGGAGTCCT+TGG | - | chr1.2:51994169-51994188 | MS.gene059017:intron | 40.0% |
| ! | TGACCTCATTTTCCTTCTCT+TGG | + | chr1.2:51995702-51995721 | None:intergenic | 40.0% |
| ! | TTGGAAGTTGTTGGCTATGA+TGG | - | chr1.2:51995761-51995780 | MS.gene059017:CDS | 40.0% |
| !! | ATTCGGCTCTCCTTTTGAAA+GGG | + | chr1.2:51992718-51992737 | None:intergenic | 40.0% |
| !! | CTAGCCACTGATTCTATATG+TGG | + | chr1.2:51995410-51995429 | None:intergenic | 40.0% |
| !! | TACATTAGATGGACTGTGCT+TGG | + | chr1.2:51992670-51992689 | None:intergenic | 40.0% |
| !! | TGATAGAAACTTTGAGGCGA+TGG | + | chr1.2:51993371-51993390 | None:intergenic | 40.0% |
| !! | TTCGACCCACAATTGTTTTG+AGG | + | chr1.2:51993917-51993936 | None:intergenic | 40.0% |
| !! | TTCTACACAATCTTTAGGGC+GGG | - | chr1.2:51993625-51993644 | MS.gene059017:intron | 40.0% |
| !!! | CTTTGACTTTTTCACCACCT+TGG | + | chr1.2:51994011-51994030 | None:intergenic | 40.0% |
| !!! | GGCCGATCTTGTTTTTCATT+TGG | + | chr1.2:51994974-51994993 | None:intergenic | 40.0% |
| AACAAAGAAGGGCCTTCTGT+GGG | + | chr1.2:51995819-51995838 | None:intergenic | 45.0% | |
| AAGCTATGTCACCAATGCCA+AGG | - | chr1.2:51993564-51993583 | MS.gene059017:intron | 45.0% | |
| AAGGCCCTTCTTTGTTCAAG+AGG | - | chr1.2:51995823-51995842 | MS.gene059017:CDS | 45.0% | |
| ACAGTCTATGAACCTAGCCT+CGG | - | chr1.2:51993956-51993975 | MS.gene059017:intron | 45.0% | |
| ACATGGATGCAATCTCAGAG+AGG | - | chr1.2:51992909-51992928 | MS.gene059017:CDS | 45.0% | |
| ACCATCTTTCGTGCATTCCA+AGG | + | chr1.2:51995053-51995072 | None:intergenic | 45.0% | |
| ACTGAATGAGTCAAAGCCCT+TGG | - | chr1.2:51994937-51994956 | MS.gene059017:CDS | 45.0% | |
| AGAGGACATGATCACACTAG+AGG | - | chr1.2:51994276-51994295 | MS.gene059017:intron | 45.0% | |
| AGGCCAAGAGAAGGAAAATG+AGG | - | chr1.2:51995696-51995715 | MS.gene059017:CDS | 45.0% | |
| AGGCCCTTCTTTGTTCAAGA+GGG | - | chr1.2:51995824-51995843 | MS.gene059017:CDS | 45.0% | |
| AGTCTCTAGTGAACCACAAG+AGG | - | chr1.2:51994258-51994277 | MS.gene059017:intron | 45.0% | |
| AGTGTGATCATGTCCTCTTG+TGG | + | chr1.2:51994274-51994293 | None:intergenic | 45.0% | |
| ATGCAATCCCAAGAATGCCT+TGG | + | chr1.2:51993584-51993603 | None:intergenic | 45.0% | |
| ATGCACGAAAGATGGTCACA+TGG | - | chr1.2:51995057-51995076 | MS.gene059017:CDS | 45.0% | |
| CATTCATTTGGGCCACAATG+TGG | + | chr1.2:51995865-51995884 | None:intergenic | 45.0% | |
| CATTCTTCGGTATTCTCCAG+TGG | - | chr1.2:51993494-51993513 | MS.gene059017:intron | 45.0% | |
| CTCTTAATGAGGCCAAGAGA+AGG | - | chr1.2:51995687-51995706 | MS.gene059017:CDS | 45.0% | |
| CTGTACTCAGCCTCTTAATG+AGG | - | chr1.2:51995676-51995695 | MS.gene059017:CDS | 45.0% | |
| CTTCTCTTGGCCTCATTAAG+AGG | + | chr1.2:51995689-51995708 | None:intergenic | 45.0% | |
| GCTGCACTATTGGAAGTTGT+TGG | - | chr1.2:51995752-51995771 | MS.gene059017:CDS | 45.0% | |
| GGGCTTGAAACCCTTTCAAA+AGG | - | chr1.2:51992705-51992724 | MS.gene059017:CDS | 45.0% | |
| GTATTCCCTTGAAAGCCCAT+TGG | - | chr1.2:51995619-51995638 | MS.gene059017:CDS | 45.0% | |
| TAGGGTGGCCATTGAAACAT+TGG | - | chr1.2:51992793-51992812 | MS.gene059017:CDS | 45.0% | |
| TCAAATTCCCTCTACTCCAC+AGG | - | chr1.2:51993112-51993131 | MS.gene059017:CDS | 45.0% | |
| TCACAAAGAACATGGCTCCA+AGG | - | chr1.2:51993991-51994010 | MS.gene059017:intron | 45.0% | |
| TCACCATTCCAACACACAGA+AGG | + | chr1.2:51994515-51994534 | None:intergenic | 45.0% | |
| TCATCATCCAAGCACAGAAC+AGG | - | chr1.2:51992863-51992882 | MS.gene059017:CDS | 45.0% | |
| TCATTTGTTCTCCCAGGACT+AGG | + | chr1.2:51993320-51993339 | None:intergenic | 45.0% | |
| TCCGGAATCTACTCGAATAG+TGG | - | chr1.2:51993286-51993305 | MS.gene059017:CDS | 45.0% | |
| TCCTTGGAATGCACGAAAGA+TGG | - | chr1.2:51995049-51995068 | MS.gene059017:CDS | 45.0% | |
| TGATGGAACTGATGTTTCGG+TGG | + | chr1.2:51994149-51994168 | None:intergenic | 45.0% | |
| TGCACGAAAGATGGTCACAT+GGG | - | chr1.2:51995058-51995077 | MS.gene059017:CDS | 45.0% | |
| TGGGATTGCATCCATGTATG+TGG | - | chr1.2:51993593-51993612 | MS.gene059017:intron | 45.0% | |
| TTCTCAGGCCTTCATGCATT+TGG | + | chr1.2:51993451-51993470 | None:intergenic | 45.0% | |
| ! | ACCAATGCCAAGGCATTCTT+GGG | - | chr1.2:51993574-51993593 | MS.gene059017:intron | 45.0% |
| ! | AGATGTTGATGAGGGGAAGA+TGG | - | chr1.2:51992944-51992963 | MS.gene059017:CDS | 45.0% |
| ! | ATTTGGAATCTCTGGCACCA+AGG | + | chr1.2:51994957-51994976 | None:intergenic | 45.0% |
| ! | GATGAAGTTTGTTTGGGGTG+GGG | - | chr1.2:51995901-51995920 | MS.gene059017:CDS | 45.0% |
| ! | GGATGAAGTTTGTTTGGGGT+GGG | - | chr1.2:51995900-51995919 | MS.gene059017:CDS | 45.0% |
| ! | TGGAGGGAAGATGTTGATGA+GGG | - | chr1.2:51992936-51992955 | MS.gene059017:CDS | 45.0% |
| ! | TGGTATTGAAGCCTAGTCCT+GGG | - | chr1.2:51993306-51993325 | MS.gene059017:CDS | 45.0% |
| ! | TTTGGAATCTCTGGCACCAA+GGG | + | chr1.2:51994956-51994975 | None:intergenic | 45.0% |
| !! | CTTTGAGGCGATGGATTTGT+TGG | + | chr1.2:51993362-51993381 | None:intergenic | 45.0% |
| AACGTGTTCTCCTGAGTCCT+CGG | - | chr1.2:51993649-51993668 | MS.gene059017:intron | 50.0% | |
| AAGCAGCTGTATGGGAGAAC+AGG | - | chr1.2:51993249-51993268 | MS.gene059017:CDS | 50.0% | |
| AATCTCAGAGAGGAAGGTGG+AGG | - | chr1.2:51992919-51992938 | MS.gene059017:CDS | 50.0% | |
| ACTGTTGAAGATGCAGGGTC+AGG | + | chr1.2:51993941-51993960 | None:intergenic | 50.0% | |
| AGGAAAGAGGTTGTGCAGAG+TGG | - | chr1.2:51995956-51995975 | MS.gene059017:CDS | 50.0% | |
| AGTGGCTAGGACCCTATCAT+GGG | - | chr1.2:51995421-51995440 | MS.gene059017:CDS | 50.0% | |
| ATCTCAGAGAGGAAGGTGGA+GGG | - | chr1.2:51992920-51992939 | MS.gene059017:CDS | 50.0% | |
| CAAAGAACATGGCTCCAAGG+TGG | - | chr1.2:51993994-51994013 | MS.gene059017:intron | 50.0% | |
| CCCATTGGACCCATCATTGA+GGG | - | chr1.2:51995634-51995653 | MS.gene059017:CDS | 50.0% | |
| CTCATCACTGGAATAGCCAC+TGG | + | chr1.2:51993513-51993532 | None:intergenic | 50.0% | |
| GAACAAAGAAGGGCCTTCTG+TGG | + | chr1.2:51995820-51995839 | None:intergenic | 50.0% | |
| GCATCATCCTGTGGAGTAGA+GGG | + | chr1.2:51993122-51993141 | None:intergenic | 50.0% | |
| GGAAAGAGGTTGTGCAGAGT+GGG | - | chr1.2:51995957-51995976 | MS.gene059017:CDS | 50.0% | |
| GGATGCAATCTCAGAGAGGA+AGG | - | chr1.2:51992913-51992932 | MS.gene059017:CDS | 50.0% | |
| GTGGAGGGAAGATGTTGATG+AGG | - | chr1.2:51992935-51992954 | MS.gene059017:CDS | 50.0% | |
| TCCCAAGAATGCCTTGGCAT+TGG | + | chr1.2:51993578-51993597 | None:intergenic | 50.0% | |
| TGCAATCTCAGAGAGGAAGG+TGG | - | chr1.2:51992916-51992935 | MS.gene059017:CDS | 50.0% | |
| TGCATCATCCTGTGGAGTAG+AGG | + | chr1.2:51993123-51993142 | None:intergenic | 50.0% | |
| TGTGAGCATCATCAACACCG+AGG | + | chr1.2:51993976-51993995 | None:intergenic | 50.0% | |
| ! | ATGGGTCCAATGGGCTTTCA+AGG | + | chr1.2:51995628-51995647 | None:intergenic | 50.0% |
| ! | CACCAATGCCAAGGCATTCT+TGG | - | chr1.2:51993573-51993592 | MS.gene059017:intron | 50.0% |
| ! | GGAGGGAAGATGTTGATGAG+GGG | - | chr1.2:51992937-51992956 | MS.gene059017:CDS | 50.0% |
| ! | GGCTTTGACTCATTCAGTCC+AGG | + | chr1.2:51994935-51994954 | None:intergenic | 50.0% |
| ! | GGGATGAAGTTTGTTTGGGG+TGG | - | chr1.2:51995899-51995918 | MS.gene059017:CDS | 50.0% |
| ! | GTGGTATTGAAGCCTAGTCC+TGG | - | chr1.2:51993305-51993324 | MS.gene059017:CDS | 50.0% |
| ! | TGGGTCCAATGGGCTTTCAA+GGG | + | chr1.2:51995627-51995646 | None:intergenic | 50.0% |
| !! | CCCTCAATGATGGGTCCAAT+GGG | + | chr1.2:51995637-51995656 | None:intergenic | 50.0% |
| !! | GCTTTGGGGAGGGAAATAGA+AGG | - | chr1.2:51996010-51996029 | MS.gene059017:CDS | 50.0% |
| !! | GGAGATTGATGCTTTGGGGA+GGG | - | chr1.2:51996000-51996019 | MS.gene059017:CDS | 50.0% |
| !! | TCCCTCAATGATGGGTCCAA+TGG | + | chr1.2:51995638-51995657 | None:intergenic | 50.0% |
| !! | TGGAGATTGATGCTTTGGGG+AGG | - | chr1.2:51995999-51996018 | MS.gene059017:CDS | 50.0% |
| AGAGGTTGTGCAGAGTGGGT+TGG | - | chr1.2:51995961-51995980 | MS.gene059017:CDS | 55.0% | |
| CAGTGGCTAGGACCCTATCA+TGG | - | chr1.2:51995420-51995439 | MS.gene059017:CDS | 55.0% | |
| CTTTGCCTCTATGCACACCG+AGG | + | chr1.2:51993669-51993688 | None:intergenic | 55.0% | |
| GCATCATCAACACCGAGGCT+AGG | + | chr1.2:51993971-51993990 | None:intergenic | 55.0% | |
| GCCCATTGGACCCATCATTG+AGG | - | chr1.2:51995633-51995652 | MS.gene059017:CDS | 55.0% | |
| TCTATGCACACCGAGGACTC+AGG | + | chr1.2:51993662-51993681 | None:intergenic | 55.0% | |
| ! | TGAGTCCTCGGTGTGCATAG+AGG | - | chr1.2:51993661-51993680 | MS.gene059017:CDS | 55.0% |
| !! | TGTGCAGAGTGGGTTGGTTG+AGG | - | chr1.2:51995967-51995986 | MS.gene059017:CDS | 55.0% |
| TGTGCAGTGGGACCCACAGA+AGG | - | chr1.2:51995804-51995823 | MS.gene059017:CDS | 60.0% | |
| GGGTGGGGACAGTCACAGCC+TGG | - | chr1.2:51995916-51995935 | MS.gene059017:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 51992648 | 51996087 | 51992648 | ID=MS.gene059017 |
| chr1.2 | mRNA | 51992648 | 51996087 | 51992648 | ID=MS.gene059017.t1;Parent=MS.gene059017 |
| chr1.2 | exon | 51994438 | 51996087 | 51994438 | ID=MS.gene059017.t1.exon1;Parent=MS.gene059017.t1 |
| chr1.2 | CDS | 51994438 | 51996087 | 51994438 | ID=cds.MS.gene059017.t1;Parent=MS.gene059017.t1 |
| chr1.2 | exon | 51993656 | 51993803 | 51993656 | ID=MS.gene059017.t1.exon2;Parent=MS.gene059017.t1 |
| chr1.2 | CDS | 51993656 | 51993803 | 51993656 | ID=cds.MS.gene059017.t1;Parent=MS.gene059017.t1 |
| chr1.2 | exon | 51992648 | 51993369 | 51992648 | ID=MS.gene059017.t1.exon3;Parent=MS.gene059017.t1 |
| chr1.2 | CDS | 51992648 | 51993369 | 51992648 | ID=cds.MS.gene059017.t1;Parent=MS.gene059017.t1 |
| Gene Sequence |
| Protein sequence |
