Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059687.t1 | XP_003611447.1 | 98.6 | 289 | 4 | 0 | 1 | 289 | 1 | 289 | 9.10E-160 | 572.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059687.t1 | Q9C5W7 | 62.8 | 288 | 99 | 3 | 2 | 289 | 1 | 280 | 2.0e-99 | 363.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059687.t1 | G7JZV0 | 98.6 | 289 | 4 | 0 | 1 | 289 | 1 | 289 | 6.6e-160 | 572.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059687 | MS.gene06652 | 0.8082 | 3.48E-50 | -1.69E-46 |
| MS.gene059687 | MS.gene82978 | 0.800361 | 1.49E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059687.t1 | MTR_5g014080 | 98.616 | 289 | 4 | 0 | 1 | 289 | 1 | 289 | 0.0 | 586 |
| MS.gene059687.t1 | MTR_4g098860 | 78.125 | 288 | 55 | 2 | 2 | 289 | 1 | 280 | 2.61e-159 | 445 |
| MS.gene059687.t1 | MTR_1g069185 | 37.643 | 263 | 136 | 7 | 3 | 261 | 5 | 243 | 6.50e-51 | 168 |
| MS.gene059687.t1 | MTR_4g022920 | 34.956 | 226 | 118 | 4 | 5 | 230 | 4 | 200 | 7.76e-30 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059687.t1 | AT1G32400 | 66.783 | 286 | 87 | 3 | 4 | 289 | 3 | 280 | 1.54e-122 | 352 |
| MS.gene059687.t1 | AT1G32400 | 66.783 | 286 | 87 | 3 | 4 | 289 | 3 | 280 | 1.54e-122 | 352 |
| MS.gene059687.t1 | AT1G32400 | 66.783 | 286 | 87 | 3 | 4 | 289 | 3 | 280 | 1.54e-122 | 352 |
| MS.gene059687.t1 | AT2G20230 | 33.829 | 269 | 157 | 6 | 3 | 260 | 5 | 263 | 9.75e-39 | 137 |
| MS.gene059687.t1 | AT4G28770 | 35.238 | 210 | 119 | 5 | 64 | 267 | 82 | 280 | 2.53e-33 | 123 |
| MS.gene059687.t1 | AT4G28770 | 37.097 | 186 | 104 | 4 | 84 | 267 | 150 | 324 | 5.46e-33 | 124 |
| MS.gene059687.t1 | AT2G20740 | 30.739 | 257 | 123 | 8 | 5 | 253 | 6 | 215 | 1.33e-30 | 114 |
| MS.gene059687.t1 | AT2G20740 | 36.723 | 177 | 90 | 5 | 85 | 253 | 12 | 174 | 2.00e-30 | 113 |
| MS.gene059687.t1 | AT2G20740 | 31.111 | 135 | 71 | 5 | 125 | 251 | 3 | 123 | 1.21e-13 | 67.0 |
Find 78 sgRNAs with CRISPR-Local
Find 378 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTCGTTGTTTCTTGTTT+TGG | 0.175657 | 5.1:+6927478 | MS.gene059687:CDS |
| CTCCATGCATCATTTCTATT+TGG | 0.183792 | 5.1:-6930391 | None:intergenic |
| TCTTGTTAGCCCTTATTGTT+AGG | 0.196919 | 5.1:+6930230 | MS.gene059687:CDS |
| GGTTTGGCTATTGTGGGTTA+TGG | 0.213085 | 5.1:+6926271 | MS.gene059687:CDS |
| GATAGTGCTCTAATTCAATT+TGG | 0.215025 | 5.1:+6926382 | MS.gene059687:CDS |
| GTTTGGCTATTGTGGGTTAT+GGG | 0.276554 | 5.1:+6926272 | MS.gene059687:CDS |
| ATTTGGGCGGCCGATGCTTT+TGG | 0.288143 | 5.1:+6926399 | MS.gene059687:CDS |
| AGGTTTATTTACTTATTTAT+TGG | 0.292003 | 5.1:+6927442 | MS.gene059687:intron |
| TATTTACAGCCCTAACAATA+AGG | 0.297511 | 5.1:-6930240 | None:intergenic |
| TTGGCTGTGAGTTTGCTTGC+TGG | 0.304573 | 5.1:-6931825 | None:intergenic |
| TCCATGCATCATTTCTATTT+GGG | 0.305941 | 5.1:-6930390 | None:intergenic |
| TGGTGTGTTGTAGAGGCTTC+TGG | 0.307436 | 5.1:+6926206 | MS.gene059687:CDS |
| ATGGGTTTCTCAGAGAGAAT+TGG | 0.349575 | 5.1:+6927960 | MS.gene059687:CDS |
| GGCTGCCGAACTTGCTGCCT+TGG | 0.360568 | 5.1:-6930301 | None:intergenic |
| TTATTGTTAGGGCTGTAAAT+AGG | 0.366779 | 5.1:+6930242 | MS.gene059687:CDS |
| ACCTATTCTTTGACAAAAGC+TGG | 0.371812 | 5.1:+6927778 | MS.gene059687:CDS |
| TCTTGGGATTGTCATCTTTG+AGG | 0.385647 | 5.1:+6928003 | MS.gene059687:CDS |
| CTTGTTAGCCCTTATTGTTA+GGG | 0.391844 | 5.1:+6930231 | MS.gene059687:CDS |
| GAAATTCCAACAGATAAAAC+TGG | 0.392680 | 5.1:+6927920 | MS.gene059687:CDS |
| GTGACTGGTTTGGCTATTGT+GGG | 0.393036 | 5.1:+6926265 | MS.gene059687:CDS |
| GGGTTATGGGATCTATTTGC+TGG | 0.393501 | 5.1:+6926285 | MS.gene059687:CDS |
| CCATCAGGGTTACCAGTTGC+TGG | 0.403929 | 5.1:+6930352 | MS.gene059687:CDS |
| ACTGTTGATCTTGGTAGAGC+TGG | 0.404760 | 5.1:+6927743 | MS.gene059687:CDS |
| TGGTCCGTTGTCCCAGCAAC+TGG | 0.408522 | 5.1:-6930364 | None:intergenic |
| TGTGACTGGTTTGGCTATTG+TGG | 0.417410 | 5.1:+6926264 | MS.gene059687:CDS |
| CATATTGACTGTGACTGGTT+TGG | 0.419696 | 5.1:+6926255 | MS.gene059687:CDS |
| AGACAAGCAGGTCCACCATC+AGG | 0.420726 | 5.1:+6930337 | MS.gene059687:CDS |
| ATTGTGAGATGGGTTGCTCT+TGG | 0.423628 | 5.1:+6927986 | MS.gene059687:CDS |
| TTGTGAGATGGGTTGCTCTT+GGG | 0.426805 | 5.1:+6927987 | MS.gene059687:CDS |
| TGGGTTTCTCAGAGAGAATT+GGG | 0.427310 | 5.1:+6927961 | MS.gene059687:CDS |
| TTAATCCAAGGCAGCAAGTT+CGG | 0.433091 | 5.1:+6930296 | MS.gene059687:CDS |
| TTTAGTGGCACTGTTGATCT+TGG | 0.436265 | 5.1:+6927734 | MS.gene059687:CDS |
| AACTTCATATTGACTGTGAC+TGG | 0.442128 | 5.1:+6926250 | MS.gene059687:CDS |
| ATAGTGCTCTAATTCAATTT+GGG | 0.450779 | 5.1:+6926383 | MS.gene059687:CDS |
| CATCATTTCTATTTGGGCGC+TGG | 0.458958 | 5.1:-6930384 | None:intergenic |
| GGTGTGTTGTAGAGGCTTCT+GGG | 0.459724 | 5.1:+6926207 | MS.gene059687:CDS |
| TGGAACCTTTGCGACTCGGA+TGG | 0.465746 | 5.1:-6931805 | None:intergenic |
| CCGCTGACCGGAGAAATATC+TGG | 0.468496 | 5.1:-6926358 | None:intergenic |
| TTGACAAATTGCCTAAGGCT+TGG | 0.479937 | 5.1:+6926446 | MS.gene059687:CDS |
| ATTTACTTATTTATTGGTGT+CGG | 0.480194 | 5.1:+6927448 | MS.gene059687:CDS |
| TTGCTGGAACCTTTGCGACT+CGG | 0.481319 | 5.1:-6931809 | None:intergenic |
| TGAAGTTTAAAAGCTTCAAA+AGG | 0.481784 | 5.1:-6926234 | None:intergenic |
| TTGATAAGGATACACAAATC+AGG | 0.492833 | 5.1:-6927534 | None:intergenic |
| AGAAAGATGGTGTGTTGTAG+AGG | 0.492994 | 5.1:+6926199 | None:intergenic |
| GAATTGGGATATTGTGAGAT+GGG | 0.497392 | 5.1:+6927976 | MS.gene059687:CDS |
| AGAATTGGGATATTGTGAGA+TGG | 0.498426 | 5.1:+6927975 | MS.gene059687:CDS |
| ATTTACAGCCCTAACAATAA+GGG | 0.500669 | 5.1:-6930239 | None:intergenic |
| GGAACCTTTGCGACTCGGAT+GGG | 0.508031 | 5.1:-6931804 | None:intergenic |
| ATCTGGCGTTGGAGAAATGT+CGG | 0.508214 | 5.1:-6926341 | None:intergenic |
| ATGCATGGAGTACACGGATG+AGG | 0.508700 | 5.1:+6930404 | MS.gene059687:CDS |
| TTTATCGTCATCAGAAGTCT+TGG | 0.522604 | 5.1:-6926317 | None:intergenic |
| TCCAACGCCAGATATTTCTC+CGG | 0.526278 | 5.1:+6926351 | MS.gene059687:CDS |
| TCTGGCGTTGGAGAAATGTC+GGG | 0.528483 | 5.1:-6926340 | None:intergenic |
| CATCAGGGTTACCAGTTGCT+GGG | 0.538957 | 5.1:+6930353 | MS.gene059687:CDS |
| TTGCTCAATAATAGACAAGC+AGG | 0.539753 | 5.1:+6930325 | MS.gene059687:CDS |
| CTGTTGATCTTGGTAGAGCT+GGG | 0.542791 | 5.1:+6927744 | MS.gene059687:CDS |
| ACCGGAGAAATATCTGGCGT+TGG | 0.558113 | 5.1:-6926352 | None:intergenic |
| TCATCACTATCGTAATCTGC+TGG | 0.565871 | 5.1:-6930265 | None:intergenic |
| GTTACCAGTTGCTGGGACAA+CGG | 0.574204 | 5.1:+6930360 | MS.gene059687:CDS |
| ATTGGAGCTACGACACGGAA+TGG | 0.578523 | 5.1:+6927505 | MS.gene059687:CDS |
| ACAACCCATCCGAGTCGCAA+AGG | 0.579835 | 5.1:+6931800 | MS.gene059687:CDS |
| GCTTGTCTATTATTGAGCAA+TGG | 0.590849 | 5.1:-6930322 | None:intergenic |
| ATGATGAGCTTATTAATCCA+AGG | 0.592571 | 5.1:+6930284 | MS.gene059687:CDS |
| AAGCAAGCATACCAAGCCTT+AGG | 0.594368 | 5.1:-6926457 | None:intergenic |
| GAGTACACGGATGAGGGAGA+AGG | 0.602719 | 5.1:+6930411 | MS.gene059687:CDS |
| TGCATGGAGTACACGGATGA+GGG | 0.603602 | 5.1:+6930405 | MS.gene059687:CDS |
| GACAAGCAGGTCCACCATCA+GGG | 0.606528 | 5.1:+6930338 | MS.gene059687:CDS |
| AGAGCACTATCACCGCTGAC+CGG | 0.609186 | 5.1:-6926370 | None:intergenic |
| GTGCTCTAATTCAATTTGGG+CGG | 0.609501 | 5.1:+6926386 | MS.gene059687:CDS |
| AGAGACACAGCCAAAAGCAT+CGG | 0.614496 | 5.1:-6926409 | None:intergenic |
| GAAATGATGCATGGAGTACA+CGG | 0.615934 | 5.1:+6930398 | MS.gene059687:CDS |
| GCAACTGGTAACCCTGATGG+TGG | 0.644952 | 5.1:-6930349 | None:intergenic |
| GAGATTACATGATGGTGCAG+CGG | 0.647361 | 5.1:-6931861 | None:intergenic |
| GTTGTATTGGAGCTACGACA+CGG | 0.649188 | 5.1:+6927500 | MS.gene059687:CDS |
| CCAGCAACTGGTAACCCTGA+TGG | 0.655467 | 5.1:-6930352 | None:intergenic |
| CCAGATATTTCTCCGGTCAG+CGG | 0.660823 | 5.1:+6926358 | MS.gene059687:CDS |
| GCCCAAATAGAAATGATGCA+TGG | 0.669694 | 5.1:+6930389 | MS.gene059687:CDS |
| GACATGAAGAGATTACATGA+TGG | 0.674922 | 5.1:-6931869 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACATTACATAAAATTC+CGG | - | chr5.1:6931493-6931512 | None:intergenic | 15.0% |
| !! | AATAAAATTATTAACCAAGA+TGG | - | chr5.1:6929623-6929642 | None:intergenic | 15.0% |
| !! | AATAAAGAAATGTGAAAAAT+TGG | - | chr5.1:6929974-6929993 | None:intergenic | 15.0% |
| !! | AGGTTTATTTACTTATTTAT+TGG | + | chr5.1:6927442-6927461 | MS.gene059687:intron | 15.0% |
| !! | TATTGTTAACTTAATAACTA+TGG | - | chr5.1:6926701-6926720 | None:intergenic | 15.0% |
| !!! | TACATCTATAGTTTTTTTAA+AGG | + | chr5.1:6930998-6931017 | MS.gene059687:intron | 15.0% |
| !!! | TAGAGGAATATATTTTAATT+TGG | + | chr5.1:6930643-6930662 | MS.gene059687:intron | 15.0% |
| !!! | TTCTTATTATATTTTGTCTA+AGG | + | chr5.1:6930178-6930197 | MS.gene059687:intron | 15.0% |
| !!! | TTTGGTTTTTTATTGTATTA+TGG | - | chr5.1:6928848-6928867 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTTCTTTCC+AGG | + | chr5.1:6927898-6927917 | MS.gene059687:intron | 15.0% |
| !! | AAAACACAAATTATAGAGAA+AGG | - | chr5.1:6928370-6928389 | None:intergenic | 20.0% |
| !! | AAACACAAATTATAGAGAAA+GGG | - | chr5.1:6928369-6928388 | None:intergenic | 20.0% |
| !! | AAACATGTGTAGAAAAAATA+AGG | - | chr5.1:6927096-6927115 | None:intergenic | 20.0% |
| !! | AATTATGGCTAAAATGTAAT+TGG | + | chr5.1:6926741-6926760 | MS.gene059687:intron | 20.0% |
| !! | ATGATAACAAATAAAGCTTT+AGG | - | chr5.1:6927240-6927259 | None:intergenic | 20.0% |
| !! | ATTAACATTGAATGAACATT+AGG | - | chr5.1:6928527-6928546 | None:intergenic | 20.0% |
| !! | ATTATGGCTAAAATGTAATT+GGG | + | chr5.1:6926742-6926761 | MS.gene059687:intron | 20.0% |
| !! | ATTTACTTATTTATTGGTGT+CGG | + | chr5.1:6927448-6927467 | MS.gene059687:CDS | 20.0% |
| !! | CTAAATCCAAAAATATTTCA+TGG | + | chr5.1:6927567-6927586 | MS.gene059687:intron | 20.0% |
| !! | GAAAAATGTCTTATGTAAAA+AGG | - | chr5.1:6931547-6931566 | None:intergenic | 20.0% |
| !! | GCTTCATAATGTAAAATTAA+AGG | + | chr5.1:6926944-6926963 | MS.gene059687:intron | 20.0% |
| !! | TAAACAAAAAGTTGTTTGAT+TGG | + | chr5.1:6928026-6928045 | MS.gene059687:intron | 20.0% |
| !! | TATCAAATTAACAAACTTGT+CGG | - | chr5.1:6928615-6928634 | None:intergenic | 20.0% |
| !! | TTAATCGTTAAACGAATTAT+TGG | + | chr5.1:6927681-6927700 | MS.gene059687:intron | 20.0% |
| !! | TTGAAAATACTTGGATAAAA+GGG | - | chr5.1:6929276-6929295 | None:intergenic | 20.0% |
| !! | TTTCAATTTCAAATTGGATT+GGG | + | chr5.1:6929484-6929503 | MS.gene059687:intron | 20.0% |
| !!! | AACAAAGTATTCAATTTTAG+TGG | + | chr5.1:6927719-6927738 | MS.gene059687:intron | 20.0% |
| !!! | AATTTATGATCTGAAATTGA+AGG | + | chr5.1:6927828-6927847 | MS.gene059687:intron | 20.0% |
| !!! | ACTATGGATTTTATCATATA+CGG | - | chr5.1:6926685-6926704 | None:intergenic | 20.0% |
| !!! | AGTTTCTTTTCTTAAACAAA+AGG | - | chr5.1:6927012-6927031 | None:intergenic | 20.0% |
| !!! | GAGATTTTGATATGATATAT+GGG | + | chr5.1:6927942-6927961 | MS.gene059687:CDS | 20.0% |
| !!! | GATAGAAATTGTTTTTCATT+TGG | + | chr5.1:6930925-6930944 | MS.gene059687:intron | 20.0% |
| !!! | TTGATAATGATTGAAAATGA+AGG | + | chr5.1:6928629-6928648 | MS.gene059687:intron | 20.0% |
| !!! | TTGTATTATGGATTTTCTTA+TGG | - | chr5.1:6928836-6928855 | None:intergenic | 20.0% |
| ! | AAATATCATCCCATGAATAT+TGG | + | chr5.1:6928132-6928151 | MS.gene059687:intron | 25.0% |
| ! | AATGTAAATGGATCAAAGTT+AGG | + | chr5.1:6929334-6929353 | MS.gene059687:intron | 25.0% |
| ! | ACCTAATGTTCATTCAATAA+AGG | + | chr5.1:6928429-6928448 | MS.gene059687:intron | 25.0% |
| ! | ACTTATCAACCAATATTCAT+GGG | - | chr5.1:6928144-6928163 | None:intergenic | 25.0% |
| ! | ATAATCTTTGATAGATTTCC+TGG | + | chr5.1:6930849-6930868 | MS.gene059687:intron | 25.0% |
| ! | ATAGTGCTCTAATTCAATTT+GGG | + | chr5.1:6926383-6926402 | MS.gene059687:CDS | 25.0% |
| ! | ATGACCATTCTTATAGATAT+AGG | + | chr5.1:6928715-6928734 | MS.gene059687:intron | 25.0% |
| ! | ATTACATAAAATTCCGGTTA+AGG | - | chr5.1:6931487-6931506 | None:intergenic | 25.0% |
| ! | ATTGATTATTAACACCATCT+TGG | + | chr5.1:6929606-6929625 | MS.gene059687:intron | 25.0% |
| ! | CAAATCCAAGCATAAAAATA+TGG | - | chr5.1:6926852-6926871 | None:intergenic | 25.0% |
| ! | CATGTATTAGTATAAGGAAA+GGG | + | chr5.1:6929738-6929757 | MS.gene059687:intron | 25.0% |
| ! | CCTAATGTTCATTCAATAAA+GGG | + | chr5.1:6928430-6928449 | MS.gene059687:intron | 25.0% |
| ! | CTCTATCATGTATTAGTATA+AGG | + | chr5.1:6929732-6929751 | MS.gene059687:intron | 25.0% |
| ! | CTTTCAATTTCAAATTGGAT+TGG | + | chr5.1:6929483-6929502 | MS.gene059687:intron | 25.0% |
| ! | GAATATCATTCCTTTCAAAA+AGG | - | chr5.1:6928880-6928899 | None:intergenic | 25.0% |
| ! | GAATTGTGATCAATATGTTA+GGG | + | chr5.1:6931640-6931659 | MS.gene059687:intron | 25.0% |
| ! | GTTGAAAATACTTGGATAAA+AGG | - | chr5.1:6929277-6929296 | None:intergenic | 25.0% |
| ! | TACTTAGCTAATTATTTGTC+TGG | - | chr5.1:6928691-6928710 | None:intergenic | 25.0% |
| ! | TACTTATCAACCAATATTCA+TGG | - | chr5.1:6928145-6928164 | None:intergenic | 25.0% |
| ! | TATATTAGTTGAAACTTGTG+TGG | - | chr5.1:6927593-6927612 | None:intergenic | 25.0% |
| ! | TCAAAAAGGAATTCTTAGTT+TGG | - | chr5.1:6928866-6928885 | None:intergenic | 25.0% |
| ! | TCATGTATTAGTATAAGGAA+AGG | + | chr5.1:6929737-6929756 | MS.gene059687:intron | 25.0% |
| ! | TCTAATATCAACATTTCTTC+TGG | - | chr5.1:6930818-6930837 | None:intergenic | 25.0% |
| ! | TGAAGTTTAAAAGCTTCAAA+AGG | - | chr5.1:6926237-6926256 | None:intergenic | 25.0% |
| ! | TGAATTGTGATCAATATGTT+AGG | + | chr5.1:6931639-6931658 | MS.gene059687:intron | 25.0% |
| ! | TGCTCTTTAGACAAATAAAT+AGG | + | chr5.1:6928185-6928204 | MS.gene059687:intron | 25.0% |
| ! | TGTTTGTCAAACAAAAAATC+TGG | + | chr5.1:6930151-6930170 | MS.gene059687:intron | 25.0% |
| ! | TTAATTGCATGTTTCATGTT+TGG | + | chr5.1:6927418-6927437 | MS.gene059687:intron | 25.0% |
| ! | TTACAGTAATGACAAATACA+AGG | - | chr5.1:6927198-6927217 | None:intergenic | 25.0% |
| ! | TTAGCATAAGACATTTGATA+AGG | - | chr5.1:6927551-6927570 | None:intergenic | 25.0% |
| ! | TTGAATACTTTGTTCACTTA+AGG | - | chr5.1:6927713-6927732 | None:intergenic | 25.0% |
| ! | TTTCAGATCATAAATTACCA+TGG | - | chr5.1:6927824-6927843 | None:intergenic | 25.0% |
| !! | AACTTGCTTCAGAAAAATTA+TGG | + | chr5.1:6926726-6926745 | MS.gene059687:intron | 25.0% |
| !! | ACTAAGAATTCCTTTTTGAA+AGG | + | chr5.1:6928867-6928886 | MS.gene059687:intron | 25.0% |
| !! | ATATTCATGGGATGATATTT+TGG | - | chr5.1:6928132-6928151 | None:intergenic | 25.0% |
| !! | ATCTGAAATTGAAGGTATAT+GGG | + | chr5.1:6927836-6927855 | MS.gene059687:intron | 25.0% |
| !! | TACTTTTGCGACATTATTTT+GGG | - | chr5.1:6929073-6929092 | None:intergenic | 25.0% |
| !! | TATATTTTGCTGCATTAGTT+TGG | + | chr5.1:6926571-6926590 | MS.gene059687:intron | 25.0% |
| !! | TGATATTATGAGTTGAACAT+TGG | - | chr5.1:6927298-6927317 | None:intergenic | 25.0% |
| !! | TTATTTGTCTAAAGAGCATA+CGG | - | chr5.1:6928183-6928202 | None:intergenic | 25.0% |
| !!! | ACTTTTAATTGTACAGAAAC+AGG | - | chr5.1:6930613-6930632 | None:intergenic | 25.0% |
| !!! | CATATTTTTATGCTTGGATT+TGG | + | chr5.1:6926850-6926869 | MS.gene059687:intron | 25.0% |
| !!! | GCTTTATTTGTTATCATTCA+TGG | + | chr5.1:6927243-6927262 | MS.gene059687:intron | 25.0% |
| !!! | GGAGATTTTGATATGATATA+TGG | + | chr5.1:6927941-6927960 | MS.gene059687:CDS | 25.0% |
| !!! | TTTCTTATGGTTTTAGTTCT+TGG | - | chr5.1:6928823-6928842 | None:intergenic | 25.0% |
| !!! | TTTTGAGAACAGAAAAACAA+GGG | + | chr5.1:6929577-6929596 | MS.gene059687:intron | 25.0% |
| AAATGCTGTGGAAATCATAT+TGG | + | chr5.1:6928933-6928952 | MS.gene059687:intron | 30.0% | |
| AAGAATTACGTCAAAGTGAA+AGG | - | chr5.1:6927335-6927354 | None:intergenic | 30.0% | |
| AATGCAATGACATTATAGTC+AGG | - | chr5.1:6931339-6931358 | None:intergenic | 30.0% | |
| AATGTATTCCAATCTCTTAG+AGG | - | chr5.1:6926652-6926671 | None:intergenic | 30.0% | |
| ACCAAAACATTCAGAAAGAA+AGG | + | chr5.1:6928285-6928304 | MS.gene059687:intron | 30.0% | |
| ATAATGATATGCCCCAAAAA+TGG | - | chr5.1:6926498-6926517 | None:intergenic | 30.0% | |
| ATATTGATCACAATTCAGAG+TGG | - | chr5.1:6931636-6931655 | None:intergenic | 30.0% | |
| ATCAAACTGAATACACATAG+TGG | - | chr5.1:6926828-6926847 | None:intergenic | 30.0% | |
| ATGACAGTTGTACTATAATC+AGG | - | chr5.1:6931182-6931201 | None:intergenic | 30.0% | |
| ATGATGAGCTTATTAATCCA+AGG | + | chr5.1:6930284-6930303 | MS.gene059687:CDS | 30.0% | |
| ATTTACAGCCCTAACAATAA+GGG | - | chr5.1:6930242-6930261 | None:intergenic | 30.0% | |
| ATTTGGTATATCTAAGCACT+TGG | + | chr5.1:6930660-6930679 | MS.gene059687:intron | 30.0% | |
| CAAGGACAAAATACTACATA+TGG | - | chr5.1:6927180-6927199 | None:intergenic | 30.0% | |
| CAATTAAAGTAAGACAGTAC+TGG | - | chr5.1:6927405-6927424 | None:intergenic | 30.0% | |
| CATCAATTCTACAGCAATAA+GGG | + | chr5.1:6929309-6929328 | MS.gene059687:intron | 30.0% | |
| CCCTTTATTGAATGAACATT+AGG | - | chr5.1:6928433-6928452 | None:intergenic | 30.0% | |
| CGTATGCATATTGTTTGTAT+AGG | + | chr5.1:6927359-6927378 | MS.gene059687:intron | 30.0% | |
| CTAGGAACTTGGTTATTATT+GGG | - | chr5.1:6930782-6930801 | None:intergenic | 30.0% | |
| CTGTCATCAAATATGATTCA+TGG | - | chr5.1:6931251-6931270 | None:intergenic | 30.0% | |
| CTGTGCTTAAGTAATAACTA+GGG | + | chr5.1:6926922-6926941 | MS.gene059687:intron | 30.0% | |
| GAAATTCCAACAGATAAAAC+TGG | + | chr5.1:6927920-6927939 | MS.gene059687:CDS | 30.0% | |
| GAAGTAAGTAAAATTCTCCA+TGG | + | chr5.1:6927804-6927823 | MS.gene059687:intron | 30.0% | |
| GATAGTGCTCTAATTCAATT+TGG | + | chr5.1:6926382-6926401 | MS.gene059687:CDS | 30.0% | |
| GATTATCCACCATCAAAAAA+AGG | + | chr5.1:6930054-6930073 | MS.gene059687:intron | 30.0% | |
| GCAATAAGGGTAAATGTAAA+TGG | + | chr5.1:6929322-6929341 | MS.gene059687:intron | 30.0% | |
| GCTAAGCTTATTTCGTTATT+TGG | + | chr5.1:6926966-6926985 | MS.gene059687:intron | 30.0% | |
| GGATCCTATATCTATAAGAA+TGG | - | chr5.1:6928722-6928741 | None:intergenic | 30.0% | |
| TAGTGGTTGTTGAAAATACT+TGG | - | chr5.1:6929285-6929304 | None:intergenic | 30.0% | |
| TATCTGATATTATGTTCTGC+TGG | + | chr5.1:6930465-6930484 | MS.gene059687:intron | 30.0% | |
| TATTTACAGCCCTAACAATA+AGG | - | chr5.1:6930243-6930262 | None:intergenic | 30.0% | |
| TCATCAATTCTACAGCAATA+AGG | + | chr5.1:6929308-6929327 | MS.gene059687:intron | 30.0% | |
| TCCATGCATCATTTCTATTT+GGG | - | chr5.1:6930393-6930412 | None:intergenic | 30.0% | |
| TCTGTGCTTAAGTAATAACT+AGG | + | chr5.1:6926921-6926940 | MS.gene059687:intron | 30.0% | |
| TGTAGAATTGATGAACTTAG+TGG | - | chr5.1:6929302-6929321 | None:intergenic | 30.0% | |
| TTATTGTTAGGGCTGTAAAT+AGG | + | chr5.1:6930242-6930261 | MS.gene059687:CDS | 30.0% | |
| TTGATAAGGATACACAAATC+AGG | - | chr5.1:6927537-6927556 | None:intergenic | 30.0% | |
| TTGATGTCTCAATTCTCAAA+TGG | + | chr5.1:6931450-6931469 | MS.gene059687:intron | 30.0% | |
| TTTAGTCACATAGCTGATAA+TGG | + | chr5.1:6931695-6931714 | MS.gene059687:intron | 30.0% | |
| TTTCACACATGCAATCATTA+AGG | + | chr5.1:6928336-6928355 | MS.gene059687:intron | 30.0% | |
| TTTGGTATATCTAAGCACTT+GGG | + | chr5.1:6930661-6930680 | MS.gene059687:intron | 30.0% | |
| ! | ACCTTTCTTTCTGAATGTTT+TGG | - | chr5.1:6928289-6928308 | None:intergenic | 30.0% |
| ! | ATTATTGTCCTCTAAGAGAT+TGG | + | chr5.1:6926641-6926660 | MS.gene059687:intron | 30.0% |
| ! | CCAATTTGAAATTGAAAGCT+CGG | - | chr5.1:6929481-6929500 | None:intergenic | 30.0% |
| ! | GAAAAGATTTAGAGGTACAA+TGG | + | chr5.1:6929881-6929900 | MS.gene059687:intron | 30.0% |
| ! | GATCTGAAATTGAAGGTATA+TGG | + | chr5.1:6927835-6927854 | MS.gene059687:intron | 30.0% |
| ! | TATTTGTCTAAAGAGCATAC+GGG | - | chr5.1:6928182-6928201 | None:intergenic | 30.0% |
| ! | TCTCTCTAGAAAAGATTTAG+AGG | + | chr5.1:6929873-6929892 | MS.gene059687:intron | 30.0% |
| ! | TTACTTCTTTGACTCGTAAA+AGG | + | chr5.1:6926535-6926554 | MS.gene059687:intron | 30.0% |
| ! | TTTCAGTCTGAAATTTCCAA+TGG | + | chr5.1:6928553-6928572 | MS.gene059687:intron | 30.0% |
| ! | TTTTATCTGTTGGAATTTCC+TGG | - | chr5.1:6927919-6927938 | None:intergenic | 30.0% |
| !! | AAATCTCCAGTTTTATCTGT+TGG | - | chr5.1:6927929-6927948 | None:intergenic | 30.0% |
| !! | ATTCTGTTTTGTGCTTTTTG+TGG | - | chr5.1:6931522-6931541 | None:intergenic | 30.0% |
| !! | CTACTTTTGCGACATTATTT+TGG | - | chr5.1:6929074-6929093 | None:intergenic | 30.0% |
| !! | CTTTTGAGAACAGAAAAACA+AGG | + | chr5.1:6929576-6929595 | MS.gene059687:intron | 30.0% |
| !! | TGATGCCATATTTTTATGCT+TGG | + | chr5.1:6926844-6926863 | MS.gene059687:intron | 30.0% |
| !!! | CTTTTTTGACAAATTGCCTA+AGG | + | chr5.1:6926441-6926460 | MS.gene059687:CDS | 30.0% |
| !!! | GTTTCTTGTTTTGGTTGTAT+TGG | + | chr5.1:6927487-6927506 | MS.gene059687:CDS | 30.0% |
| !!! | TATGGTTTTAGTTCTTGGTT+GGG | - | chr5.1:6928818-6928837 | None:intergenic | 30.0% |
| !!! | TTATGGTTTTAGTTCTTGGT+TGG | - | chr5.1:6928819-6928838 | None:intergenic | 30.0% |
| !!! | TTTTTGATGGTGGATAATCA+GGG | - | chr5.1:6930053-6930072 | None:intergenic | 30.0% |
| !!! | TTTTTTGATGGTGGATAATC+AGG | - | chr5.1:6930054-6930073 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTGTGCAGAACC+AGG | - | chr5.1:6930870-6930889 | None:intergenic | 30.0% |
| AAATTTCCAATGGTCATGCA+AGG | + | chr5.1:6928563-6928582 | MS.gene059687:intron | 35.0% | |
| AATACGATAAACTGTGCTTC+AGG | + | chr5.1:6929131-6929150 | MS.gene059687:intron | 35.0% | |
| AATAGCATTAGAGTAGGTGA+AGG | - | chr5.1:6928406-6928425 | None:intergenic | 35.0% | |
| ACACAAAACGTCACATACAA+AGG | - | chr5.1:6927646-6927665 | None:intergenic | 35.0% | |
| ACCTATTCTTTGACAAAAGC+TGG | + | chr5.1:6927778-6927797 | MS.gene059687:CDS | 35.0% | |
| AGAATTGGGATATTGTGAGA+TGG | + | chr5.1:6927975-6927994 | MS.gene059687:CDS | 35.0% | |
| AGATAGTCCAATAGCTATAG+AGG | + | chr5.1:6929834-6929853 | MS.gene059687:intron | 35.0% | |
| AGATTGCTAAATAACAGAGC+TGG | - | chr5.1:6931572-6931591 | None:intergenic | 35.0% | |
| AGGTCCTACATTATGAACTT+TGG | - | chr5.1:6928743-6928762 | None:intergenic | 35.0% | |
| AGGTCTAATTATGCAAACCT+AGG | + | chr5.1:6928305-6928324 | MS.gene059687:intron | 35.0% | |
| AGTGAATCCCAAAGAATACA+GGG | + | chr5.1:6928964-6928983 | MS.gene059687:intron | 35.0% | |
| ATCCAACACAAAAACACCTA+TGG | - | chr5.1:6929170-6929189 | None:intergenic | 35.0% | |
| ATCTCGTGTTTGAACATTGA+CGG | + | chr5.1:6929015-6929034 | MS.gene059687:intron | 35.0% | |
| ATTACGTCAAAGTGAAAGGA+AGG | - | chr5.1:6927331-6927350 | None:intergenic | 35.0% | |
| CACAAAACGTCACATACAAA+GGG | - | chr5.1:6927645-6927664 | None:intergenic | 35.0% | |
| CCGAGCTTTCAATTTCAAAT+TGG | + | chr5.1:6929478-6929497 | MS.gene059687:intron | 35.0% | |
| CTAATTATTTGTCTGGCAAC+TGG | - | chr5.1:6928684-6928703 | None:intergenic | 35.0% | |
| CTCCATGCATCATTTCTATT+TGG | - | chr5.1:6930394-6930413 | None:intergenic | 35.0% | |
| CTGGAATTAATGGAACTGTA+AGG | - | chr5.1:6928665-6928684 | None:intergenic | 35.0% | |
| CTTGTTAGCCCTTATTGTTA+GGG | + | chr5.1:6930231-6930250 | MS.gene059687:CDS | 35.0% | |
| GAATGCTTGAAATCTTGATG+AGG | + | chr5.1:6929522-6929541 | MS.gene059687:intron | 35.0% | |
| GAATTGGGATATTGTGAGAT+GGG | + | chr5.1:6927976-6927995 | MS.gene059687:CDS | 35.0% | |
| GAGACATCAAATCAACAGAA+TGG | - | chr5.1:6931440-6931459 | None:intergenic | 35.0% | |
| GATAGTCCAATAGCTATAGA+GGG | + | chr5.1:6929835-6929854 | MS.gene059687:intron | 35.0% | |
| GCGATTCTACGAGAAAATTT+GGG | - | chr5.1:6929389-6929408 | None:intergenic | 35.0% | |
| GCTAGGAACTTGGTTATTAT+TGG | - | chr5.1:6930783-6930802 | None:intergenic | 35.0% | |
| GCTGAAGACTAACATAATTG+TGG | + | chr5.1:6929103-6929122 | MS.gene059687:intron | 35.0% | |
| GCTTGTCTATTATTGAGCAA+TGG | - | chr5.1:6930325-6930344 | None:intergenic | 35.0% | |
| GCTTTATACACTTCCTAGAA+TGG | + | chr5.1:6927044-6927063 | MS.gene059687:intron | 35.0% | |
| GGATCCAAAGTTCATAATGT+AGG | + | chr5.1:6928736-6928755 | MS.gene059687:intron | 35.0% | |
| GGTCTAATTATGCAAACCTA+GGG | + | chr5.1:6928306-6928325 | MS.gene059687:intron | 35.0% | |
| GTCATTACTGTAAATTGACG+AGG | + | chr5.1:6927205-6927224 | MS.gene059687:intron | 35.0% | |
| TAAAAGCTAGTGATCAAGGA+GGG | + | chr5.1:6930695-6930714 | MS.gene059687:intron | 35.0% | |
| TAAAGAGAAATGAAGTCACG+AGG | + | chr5.1:6929993-6930012 | MS.gene059687:intron | 35.0% | |
| TAGGTGTACAATACACCAAA+TGG | - | chr5.1:6928508-6928527 | None:intergenic | 35.0% | |
| TCACCTCTTACACACATAAA+TGG | + | chr5.1:6931140-6931159 | MS.gene059687:intron | 35.0% | |
| TCTTGTTAGCCCTTATTGTT+AGG | + | chr5.1:6930230-6930249 | MS.gene059687:CDS | 35.0% | |
| TGACCATTTATGTGTGTAAG+AGG | - | chr5.1:6931146-6931165 | None:intergenic | 35.0% | |
| TGCGATTCTACGAGAAAATT+TGG | - | chr5.1:6929390-6929409 | None:intergenic | 35.0% | |
| TGTACAATACACCAAATGGT+GGG | - | chr5.1:6928504-6928523 | None:intergenic | 35.0% | |
| TGTCTCAATTCTCAAATGGA+TGG | + | chr5.1:6931454-6931473 | MS.gene059687:intron | 35.0% | |
| TTAAAAGCTAGTGATCAAGG+AGG | + | chr5.1:6930694-6930713 | MS.gene059687:intron | 35.0% | |
| TTGACAGTCATCAATGACAA+CGG | + | chr5.1:6929651-6929670 | MS.gene059687:intron | 35.0% | |
| TTGCTCAATAATAGACAAGC+AGG | + | chr5.1:6930325-6930344 | MS.gene059687:CDS | 35.0% | |
| TTTATCGTCATCAGAAGTCT+TGG | - | chr5.1:6926320-6926339 | None:intergenic | 35.0% | |
| ! | AAAAAGGAGAGAGGTATACT+TGG | + | chr5.1:6930070-6930089 | MS.gene059687:intron | 35.0% |
| ! | AAAAGGAGAGAGGTATACTT+GGG | + | chr5.1:6930071-6930090 | MS.gene059687:intron | 35.0% |
| ! | AAACAAAGCCTTTTCCCTTT+AGG | + | chr5.1:6929677-6929696 | MS.gene059687:intron | 35.0% |
| ! | AACTTCATATTGACTGTGAC+TGG | + | chr5.1:6926250-6926269 | MS.gene059687:CDS | 35.0% |
| ! | AGTTGATTCTTAAGTGTCTC+TGG | - | chr5.1:6926776-6926795 | None:intergenic | 35.0% |
| ! | GCTTTTGTCAAAGAATAGGT+AGG | - | chr5.1:6927778-6927797 | None:intergenic | 35.0% |
| ! | GTGTGGCCATGAAATATTTT+TGG | - | chr5.1:6927576-6927595 | None:intergenic | 35.0% |
| ! | TAAAAGTATGCTCTCACTAG+AGG | + | chr5.1:6930626-6930645 | MS.gene059687:intron | 35.0% |
| ! | TAAAGTAAGACAGTACTGGA+TGG | - | chr5.1:6927401-6927420 | None:intergenic | 35.0% |
| ! | TCCAGCTTTTGTCAAAGAAT+AGG | - | chr5.1:6927782-6927801 | None:intergenic | 35.0% |
| ! | TGGATAAAAGGGTTCACTTT+TGG | - | chr5.1:6929265-6929284 | None:intergenic | 35.0% |
| !! | CACTTTTTGTGTACCATTCT+AGG | - | chr5.1:6927060-6927079 | None:intergenic | 35.0% |
| !! | GGATAAAAGGGTTCACTTTT+GGG | - | chr5.1:6929264-6929283 | None:intergenic | 35.0% |
| !!! | ATCAATTAGCTTTTGAGGCA+TGG | + | chr5.1:6926802-6926821 | MS.gene059687:intron | 35.0% |
| !!! | CCTTGATCACTAGCTTTTAA+GGG | - | chr5.1:6930694-6930713 | None:intergenic | 35.0% |
| !!! | CTCTCATCAATTAGCTTTTG+AGG | + | chr5.1:6926797-6926816 | MS.gene059687:intron | 35.0% |
| !!! | CTCTTCGTTGTTTCTTGTTT+TGG | + | chr5.1:6927478-6927497 | MS.gene059687:CDS | 35.0% |
| !!! | TACCTCTCTCCTTTTTTTGA+TGG | - | chr5.1:6930066-6930085 | None:intergenic | 35.0% |
| !!! | TCCTTGATCACTAGCTTTTA+AGG | - | chr5.1:6930695-6930714 | None:intergenic | 35.0% |
| AATCCCAAAGAATACAGGGA+AGG | + | chr5.1:6928968-6928987 | MS.gene059687:intron | 40.0% | |
| ACTATGTGCAACGAAACCTA+TGG | - | chr5.1:6928784-6928803 | None:intergenic | 40.0% | |
| AGGAATGTGTATCGAATTGC+AGG | + | chr5.1:6930198-6930217 | MS.gene059687:intron | 40.0% | |
| ATACAAAGGGAGAGTGAAAG+AGG | - | chr5.1:6927632-6927651 | None:intergenic | 40.0% | |
| ATACTGCTCCTTGTTCAGTA+TGG | + | chr5.1:6931754-6931773 | MS.gene059687:intron | 40.0% | |
| ATAGTAGTCGTGTGGTACAT+GGG | + | chr5.1:6930754-6930773 | MS.gene059687:intron | 40.0% | |
| ATGGGTTTCTCAGAGAGAAT+TGG | + | chr5.1:6927960-6927979 | MS.gene059687:CDS | 40.0% | |
| ATGTACCACACGACTACTAT+GGG | - | chr5.1:6930754-6930773 | None:intergenic | 40.0% | |
| CACCATCAAAAAAAGGAGAG+AGG | + | chr5.1:6930061-6930080 | MS.gene059687:intron | 40.0% | |
| CATTGTCCCTCTATAGCTAT+TGG | - | chr5.1:6929844-6929863 | None:intergenic | 40.0% | |
| CCCTTAAAAGCTAGTGATCA+AGG | + | chr5.1:6930691-6930710 | MS.gene059687:intron | 40.0% | |
| CTGTGGAAATCATATTGGAG+CGG | + | chr5.1:6928938-6928957 | MS.gene059687:intron | 40.0% | |
| GAAATGATGCATGGAGTACA+CGG | + | chr5.1:6930398-6930417 | MS.gene059687:CDS | 40.0% | |
| GAGTGAATCCCAAAGAATAC+AGG | + | chr5.1:6928963-6928982 | MS.gene059687:intron | 40.0% | |
| GCCCAAATAGAAATGATGCA+TGG | + | chr5.1:6930389-6930408 | MS.gene059687:CDS | 40.0% | |
| GGTGTCAATAGCATTAGAGT+AGG | - | chr5.1:6928412-6928431 | None:intergenic | 40.0% | |
| GTATGATCATGCTAGGAACT+TGG | - | chr5.1:6930793-6930812 | None:intergenic | 40.0% | |
| GTGCTCTAATTCAATTTGGG+CGG | + | chr5.1:6926386-6926405 | MS.gene059687:CDS | 40.0% | |
| GTGTACAATACACCAAATGG+TGG | - | chr5.1:6928505-6928524 | None:intergenic | 40.0% | |
| GTTACACCGTTTAACCCTTA+CGG | - | chr5.1:6926882-6926901 | None:intergenic | 40.0% | |
| TACTGCTCCTTGTTCAGTAT+GGG | + | chr5.1:6931755-6931774 | MS.gene059687:intron | 40.0% | |
| TATCAAGCCCATACTGAACA+AGG | - | chr5.1:6931765-6931784 | None:intergenic | 40.0% | |
| TCATCACTATCGTAATCTGC+TGG | - | chr5.1:6930268-6930287 | None:intergenic | 40.0% | |
| TCATTCAATAAAGGGCAACC+CGG | + | chr5.1:6928438-6928457 | MS.gene059687:intron | 40.0% | |
| TCTCTCACTTGTAAATGCTG+TGG | + | chr5.1:6928921-6928940 | MS.gene059687:intron | 40.0% | |
| TCTGGTTGTATGATCATGCT+AGG | - | chr5.1:6930800-6930819 | None:intergenic | 40.0% | |
| TCTTGGGATTGTCATCTTTG+AGG | + | chr5.1:6928003-6928022 | MS.gene059687:CDS | 40.0% | |
| TGAAAAATTGGCCACTAGAG+CGG | - | chr5.1:6929962-6929981 | None:intergenic | 40.0% | |
| TGGGAGTTTCAAAGCAAGAA+AGG | - | chr5.1:6929245-6929264 | None:intergenic | 40.0% | |
| TGGGTTTCTCAGAGAGAATT+GGG | + | chr5.1:6927961-6927980 | MS.gene059687:CDS | 40.0% | |
| TGTCTGGCAACTGGAATTAA+TGG | - | chr5.1:6928675-6928694 | None:intergenic | 40.0% | |
| TGTGGAAATCATATTGGAGC+GGG | + | chr5.1:6928939-6928958 | MS.gene059687:intron | 40.0% | |
| TGTGTGAAAATGAATGCCCT+AGG | - | chr5.1:6928325-6928344 | None:intergenic | 40.0% | |
| TGTTAACCTTGCATGACCAT+TGG | - | chr5.1:6928572-6928591 | None:intergenic | 40.0% | |
| TTAATCCAAGGCAGCAAGTT+CGG | + | chr5.1:6930296-6930315 | MS.gene059687:CDS | 40.0% | |
| TTAATCCTAGGAGCTTCGAT+GGG | - | chr5.1:6929456-6929475 | None:intergenic | 40.0% | |
| TTACACCGTTTAACCCTTAC+GGG | - | chr5.1:6926881-6926900 | None:intergenic | 40.0% | |
| TTATGTGTGTAAGAGGTGAG+AGG | - | chr5.1:6931139-6931158 | None:intergenic | 40.0% | |
| TTGACAAATTGCCTAAGGCT+TGG | + | chr5.1:6926446-6926465 | MS.gene059687:CDS | 40.0% | |
| TTGCATGTTTCATGTTTGGC+AGG | + | chr5.1:6927422-6927441 | MS.gene059687:intron | 40.0% | |
| TTTAATCCTAGGAGCTTCGA+TGG | - | chr5.1:6929457-6929476 | None:intergenic | 40.0% | |
| TTTAGTGGCACTGTTGATCT+TGG | + | chr5.1:6927734-6927753 | MS.gene059687:CDS | 40.0% | |
| ! | AAAGGAGAGAGGTATACTTG+GGG | + | chr5.1:6930072-6930091 | MS.gene059687:intron | 40.0% |
| ! | AAGCAAGAAAGGCTTGTTTC+CGG | - | chr5.1:6929234-6929253 | None:intergenic | 40.0% |
| ! | CATATTGACTGTGACTGGTT+TGG | + | chr5.1:6926255-6926274 | MS.gene059687:CDS | 40.0% |
| ! | CGGAGGCTTTTATAGTTGAA+AGG | + | chr5.1:6929035-6929054 | MS.gene059687:intron | 40.0% |
| ! | GTTTGGCTATTGTGGGTTAT+GGG | + | chr5.1:6926272-6926291 | MS.gene059687:CDS | 40.0% |
| !! | GAAAGCTCGGTTTTAATCCT+AGG | - | chr5.1:6929468-6929487 | None:intergenic | 40.0% |
| !! | TGCCATAGGTGTTTTTGTGT+TGG | + | chr5.1:6929165-6929184 | MS.gene059687:intron | 40.0% |
| !! | TGCTCGGTGTAGTATTTAAG+TGG | - | chr5.1:6930730-6930749 | None:intergenic | 40.0% |
| !!! | CTCTCTCCTTTTTTTGATGG+TGG | - | chr5.1:6930063-6930082 | None:intergenic | 40.0% |
| !!! | CTCTTTTCCTGCCATTTTTG+GGG | + | chr5.1:6926484-6926503 | MS.gene059687:intron | 40.0% |
| !!! | GATCACTAGCTTTTAAGGGA+GGG | - | chr5.1:6930690-6930709 | None:intergenic | 40.0% |
| !!! | GCTCTTTTCCTGCCATTTTT+GGG | + | chr5.1:6926483-6926502 | MS.gene059687:intron | 40.0% |
| !!! | TGATCACTAGCTTTTAAGGG+AGG | - | chr5.1:6930691-6930710 | None:intergenic | 40.0% |
| !!! | TGCTCTTTTCCTGCCATTTT+TGG | + | chr5.1:6926482-6926501 | MS.gene059687:intron | 40.0% |
| AAGCAAGCATACCAAGCCTT+AGG | - | chr5.1:6926460-6926479 | None:intergenic | 45.0% | |
| AAGTCACGAGGATATACTCG+TGG | + | chr5.1:6930005-6930024 | MS.gene059687:intron | 45.0% | |
| ACTGTTGATCTTGGTAGAGC+TGG | + | chr5.1:6927743-6927762 | MS.gene059687:CDS | 45.0% | |
| AGGATACAAGCATGTGCCAT+AGG | + | chr5.1:6929151-6929170 | MS.gene059687:intron | 45.0% | |
| AGTATGCCTAAATCCAGGTC+AGG | - | chr5.1:6929939-6929958 | None:intergenic | 45.0% | |
| ATCCATACGACCTCACCTAA+AGG | - | chr5.1:6929695-6929714 | None:intergenic | 45.0% | |
| CAGCCTTCCCTGTATTCTTT+GGG | - | chr5.1:6928974-6928993 | None:intergenic | 45.0% | |
| CATAGTAGTCGTGTGGTACA+TGG | + | chr5.1:6930753-6930772 | MS.gene059687:intron | 45.0% | |
| CATCATTTCTATTTGGGCGC+TGG | - | chr5.1:6930387-6930406 | None:intergenic | 45.0% | |
| CATGTACCACACGACTACTA+TGG | - | chr5.1:6930755-6930774 | None:intergenic | 45.0% | |
| CTCCTCAATCATACCGAAAC+CGG | + | chr5.1:6929212-6929231 | MS.gene059687:intron | 45.0% | |
| CTGTTGATCTTGGTAGAGCT+GGG | + | chr5.1:6927744-6927763 | MS.gene059687:CDS | 45.0% | |
| GCACTATACTTGTGTGAGTG+TGG | + | chr5.1:6930547-6930566 | MS.gene059687:intron | 45.0% | |
| GGATGGCTAAACACCTTAAC+CGG | + | chr5.1:6931471-6931490 | MS.gene059687:intron | 45.0% | |
| GGGTATTCTCTTGCGTAGTT+TGG | + | chr5.1:6929758-6929777 | MS.gene059687:intron | 45.0% | |
| GGGTTATGGGATCTATTTGC+TGG | + | chr5.1:6926285-6926304 | MS.gene059687:CDS | 45.0% | |
| GGTGTAGTATTTAAGTGGCC+TGG | - | chr5.1:6930725-6930744 | None:intergenic | 45.0% | |
| GGTTTCGGTATGATTGAGGA+GGG | - | chr5.1:6929213-6929232 | None:intergenic | 45.0% | |
| GTATGCCTAAATCCAGGTCA+GGG | - | chr5.1:6929938-6929957 | None:intergenic | 45.0% | |
| GTGTGAGTGTGGTGTGTATA+TGG | + | chr5.1:6930558-6930577 | MS.gene059687:intron | 45.0% | |
| GTTGTATTGGAGCTACGACA+CGG | + | chr5.1:6927500-6927519 | MS.gene059687:CDS | 45.0% | |
| TACTTTCCCTTAGCAGCAAG+CGG | - | chr5.1:6928101-6928120 | None:intergenic | 45.0% | |
| TAGAATTTCAGTCCCTGACC+TGG | + | chr5.1:6929923-6929942 | MS.gene059687:intron | 45.0% | |
| TCATGCCCGTAAGGGTTAAA+CGG | + | chr5.1:6926873-6926892 | MS.gene059687:intron | 45.0% | |
| TCCAACGCCAGATATTTCTC+CGG | + | chr5.1:6926351-6926370 | MS.gene059687:CDS | 45.0% | |
| TCCATACGACCTCACCTAAA+GGG | - | chr5.1:6929694-6929713 | None:intergenic | 45.0% | |
| TCGTGTTTGAACATTGACGG+AGG | + | chr5.1:6929018-6929037 | MS.gene059687:intron | 45.0% | |
| TCTTGATGAGGAGAATGCAC+TGG | + | chr5.1:6929534-6929553 | MS.gene059687:intron | 45.0% | |
| TGATATGCCCCAAAAATGGC+AGG | - | chr5.1:6926494-6926513 | None:intergenic | 45.0% | |
| TTCCGGTTTCGGTATGATTG+AGG | - | chr5.1:6929217-6929236 | None:intergenic | 45.0% | |
| ! | AACAGGAGCATAAGACAGGA+AGG | - | chr5.1:6930596-6930615 | None:intergenic | 45.0% |
| ! | AAGCCTTTTCCCTTTAGGTG+AGG | + | chr5.1:6929682-6929701 | MS.gene059687:intron | 45.0% |
| ! | AAGGAGAGAGGTATACTTGG+GGG | + | chr5.1:6930073-6930092 | MS.gene059687:intron | 45.0% |
| ! | AGAGAAACCGACAGAAGTAC+CGG | + | chr5.1:6929789-6929808 | MS.gene059687:intron | 45.0% |
| ! | AGAGACACAGCCAAAAGCAT+CGG | - | chr5.1:6926412-6926431 | None:intergenic | 45.0% |
| ! | ATCTGGCGTTGGAGAAATGT+CGG | - | chr5.1:6926344-6926363 | None:intergenic | 45.0% |
| ! | CAGAAACAGGAGCATAAGAC+AGG | - | chr5.1:6930600-6930619 | None:intergenic | 45.0% |
| ! | GAAAGGCTTGTTTCCGGTTT+CGG | - | chr5.1:6929228-6929247 | None:intergenic | 45.0% |
| ! | GGTTTGGCTATTGTGGGTTA+TGG | + | chr5.1:6926271-6926290 | MS.gene059687:CDS | 45.0% |
| !! | ATTGTGAGATGGGTTGCTCT+TGG | + | chr5.1:6927986-6928005 | MS.gene059687:CDS | 45.0% |
| !! | GTGACTGGTTTGGCTATTGT+GGG | + | chr5.1:6926265-6926284 | MS.gene059687:CDS | 45.0% |
| !! | TGATGGTGGATAATCAGGGT+AGG | - | chr5.1:6930049-6930068 | None:intergenic | 45.0% |
| !! | TGTGACTGGTTTGGCTATTG+TGG | + | chr5.1:6926264-6926283 | MS.gene059687:CDS | 45.0% |
| !! | TTGTGAGATGGGTTGCTCTT+GGG | + | chr5.1:6927987-6928006 | MS.gene059687:CDS | 45.0% |
| !!! | CAGCGGCTTTTTTCTTCAGT+TGG | - | chr5.1:6931847-6931866 | None:intergenic | 45.0% |
| ACCGGAGAAATATCTGGCGT+TGG | - | chr5.1:6926355-6926374 | None:intergenic | 50.0% | |
| ACTTTCCCTTAGCAGCAAGC+GGG | - | chr5.1:6928100-6928119 | None:intergenic | 50.0% | |
| AGAATACAGGGAAGGCTGGA+AGG | + | chr5.1:6928976-6928995 | MS.gene059687:intron | 50.0% | |
| AGCATCCCATAGTAGTCGTG+TGG | + | chr5.1:6930746-6930765 | MS.gene059687:intron | 50.0% | |
| AGCGGAGTATGCCTAAATCC+AGG | - | chr5.1:6929944-6929963 | None:intergenic | 50.0% | |
| ATGCATGGAGTACACGGATG+AGG | + | chr5.1:6930404-6930423 | MS.gene059687:CDS | 50.0% | |
| ATGTACCCATCGAAGCTCCT+AGG | + | chr5.1:6929448-6929467 | MS.gene059687:intron | 50.0% | |
| ATTACATCCAGCCTCCTCAC+CGG | - | chr5.1:6929811-6929830 | None:intergenic | 50.0% | |
| ATTGGAGCTACGACACGGAA+TGG | + | chr5.1:6927505-6927524 | MS.gene059687:CDS | 50.0% | |
| CACGACTACTATGGGATGCT+CGG | - | chr5.1:6930746-6930765 | None:intergenic | 50.0% | |
| CATCAGGGTTACCAGTTGCT+GGG | + | chr5.1:6930353-6930372 | MS.gene059687:CDS | 50.0% | |
| CCAAAGAATACAGGGAAGGC+TGG | + | chr5.1:6928972-6928991 | MS.gene059687:intron | 50.0% | |
| CCAGATATTTCTCCGGTCAG+CGG | + | chr5.1:6926358-6926377 | MS.gene059687:CDS | 50.0% | |
| CCAGCCTTCCCTGTATTCTT+TGG | - | chr5.1:6928975-6928994 | None:intergenic | 50.0% | |
| CGACCTCACCTAAAGGGAAA+AGG | - | chr5.1:6929688-6929707 | None:intergenic | 50.0% | |
| CGGTTTCGGTATGATTGAGG+AGG | - | chr5.1:6929214-6929233 | None:intergenic | 50.0% | |
| GGGGGGGTCTAATGTAATGA+AGG | + | chr5.1:6930091-6930110 | MS.gene059687:intron | 50.0% | |
| GGTAGGCAGGGAGAAAAACT+AGG | - | chr5.1:6930032-6930051 | None:intergenic | 50.0% | |
| GGTGTGTTGTAGAGGCTTCT+GGG | + | chr5.1:6926207-6926226 | MS.gene059687:CDS | 50.0% | |
| GTGGATAATCAGGGTAGGCA+GGG | - | chr5.1:6930044-6930063 | None:intergenic | 50.0% | |
| GTTACCAGTTGCTGGGACAA+CGG | + | chr5.1:6930360-6930379 | MS.gene059687:CDS | 50.0% | |
| TACAGTGCTATGCTCGCCAT+AGG | + | chr5.1:6928765-6928784 | MS.gene059687:intron | 50.0% | |
| TCAGTCCCTGACCTGGATTT+AGG | + | chr5.1:6929930-6929949 | MS.gene059687:intron | 50.0% | |
| TCCCTTTAGGTGAGGTCGTA+TGG | + | chr5.1:6929690-6929709 | MS.gene059687:intron | 50.0% | |
| TGCATGGAGTACACGGATGA+GGG | + | chr5.1:6930405-6930424 | MS.gene059687:CDS | 50.0% | |
| TGGTGTGTTGTAGAGGCTTC+TGG | + | chr5.1:6926206-6926225 | MS.gene059687:CDS | 50.0% | |
| TTAGGCATACTCCGCTCTAG+TGG | + | chr5.1:6929948-6929967 | MS.gene059687:intron | 50.0% | |
| TTGCTGGAACCTTTGCGACT+CGG | - | chr5.1:6931812-6931831 | None:intergenic | 50.0% | |
| ! | AGGAGAGAGGTATACTTGGG+GGG | + | chr5.1:6930074-6930093 | MS.gene059687:intron | 50.0% |
| ! | GGATTTGGTCATGCCCGTAA+GGG | + | chr5.1:6926865-6926884 | MS.gene059687:intron | 50.0% |
| ! | TCTGGCGTTGGAGAAATGTC+GGG | - | chr5.1:6926343-6926362 | None:intergenic | 50.0% |
| ! | TGGATTTGGTCATGCCCGTA+AGG | + | chr5.1:6926864-6926883 | MS.gene059687:intron | 50.0% |
| ! | TTGGCTGTGAGTTTGCTTGC+TGG | - | chr5.1:6931828-6931847 | None:intergenic | 50.0% |
| ! | TTTGTCCCGCTTGCTGCTAA+GGG | + | chr5.1:6928092-6928111 | MS.gene059687:intron | 50.0% |
| ACAACCCATCCGAGTCGCAA+AGG | + | chr5.1:6931800-6931819 | MS.gene059687:CDS | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | + | chr5.1:6928464-6928483 | MS.gene059687:intron | 55.0% | |
| AGACAAGCAGGTCCACCATC+AGG | + | chr5.1:6930337-6930356 | MS.gene059687:CDS | 55.0% | |
| ATACAGGGAAGGCTGGAAGG+TGG | + | chr5.1:6928979-6928998 | MS.gene059687:intron | 55.0% | |
| CATATGCAGGGTCCAGGAAG+GGG | + | chr5.1:6928477-6928496 | MS.gene059687:intron | 55.0% | |
| CCAGCAACTGGTAACCCTGA+TGG | - | chr5.1:6930355-6930374 | None:intergenic | 55.0% | |
| CCATCAGGGTTACCAGTTGC+TGG | + | chr5.1:6930352-6930371 | MS.gene059687:CDS | 55.0% | |
| CCGCTGACCGGAGAAATATC+TGG | - | chr5.1:6926361-6926380 | None:intergenic | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | + | chr5.1:6928465-6928484 | MS.gene059687:intron | 55.0% | |
| CTCCTCACCGGTACTTCTGT+CGG | - | chr5.1:6929799-6929818 | None:intergenic | 55.0% | |
| CTTCCTGGACCCTGCATATG+CGG | - | chr5.1:6928477-6928496 | None:intergenic | 55.0% | |
| GACAAGCAGGTCCACCATCA+GGG | + | chr5.1:6930338-6930357 | MS.gene059687:CDS | 55.0% | |
| GAGTACACGGATGAGGGAGA+AGG | + | chr5.1:6930411-6930430 | MS.gene059687:CDS | 55.0% | |
| GCAACTGGTAACCCTGATGG+TGG | - | chr5.1:6930352-6930371 | None:intergenic | 55.0% | |
| GCATATGCAGGGTCCAGGAA+GGG | + | chr5.1:6928476-6928495 | MS.gene059687:intron | 55.0% | |
| GGCGAGCATAGCACTGTAGT+AGG | - | chr5.1:6928763-6928782 | None:intergenic | 55.0% | |
| GGTGAGGAGGCTGGATGTAA+TGG | + | chr5.1:6929810-6929829 | MS.gene059687:intron | 55.0% | |
| GGTGGATAATCAGGGTAGGC+AGG | - | chr5.1:6930045-6930064 | None:intergenic | 55.0% | |
| GTGATCAAGGAGGGAGAACC+AGG | + | chr5.1:6930704-6930723 | MS.gene059687:intron | 55.0% | |
| TTCCTGGACCCTGCATATGC+GGG | - | chr5.1:6928476-6928495 | None:intergenic | 55.0% | |
| ! | AGAGCACTATCACCGCTGAC+CGG | - | chr5.1:6926373-6926392 | None:intergenic | 55.0% |
| ! | ATTTGGGCGGCCGATGCTTT+TGG | + | chr5.1:6926399-6926418 | MS.gene059687:CDS | 55.0% |
| ! | CTTTGTCCCGCTTGCTGCTA+AGG | + | chr5.1:6928091-6928110 | MS.gene059687:intron | 55.0% |
| ! | GGAACCTTTGCGACTCGGAT+GGG | - | chr5.1:6931807-6931826 | None:intergenic | 55.0% |
| ! | GGAGAGAGGTATACTTGGGG+GGG | + | chr5.1:6930075-6930094 | MS.gene059687:intron | 55.0% |
| ! | TGGAACCTTTGCGACTCGGA+TGG | - | chr5.1:6931808-6931827 | None:intergenic | 55.0% |
| !! | AACCGACAGAAGTACCGGTG+AGG | + | chr5.1:6929794-6929813 | MS.gene059687:intron | 55.0% |
| CAGGAAGGGGTCCCACCATT+TGG | + | chr5.1:6928490-6928509 | MS.gene059687:intron | 60.0% | |
| CGCATATGCAGGGTCCAGGA+AGG | + | chr5.1:6928475-6928494 | MS.gene059687:intron | 60.0% | |
| TGGTCCGTTGTCCCAGCAAC+TGG | - | chr5.1:6930367-6930386 | None:intergenic | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+TGG | - | chr5.1:6928492-6928511 | None:intergenic | 60.0% |
| !! | AGAAGTACCGGTGAGGAGGC+TGG | + | chr5.1:6929801-6929820 | MS.gene059687:intron | 60.0% |
| !! | CGACAGAAGTACCGGTGAGG+AGG | + | chr5.1:6929797-6929816 | MS.gene059687:intron | 60.0% |
| CTCCCGCATATGCAGGGTCC+AGG | + | chr5.1:6928471-6928490 | MS.gene059687:intron | 65.0% | |
| ! | ATGCGGGAGCTCTAGTGCGC+CGG | - | chr5.1:6928460-6928479 | None:intergenic | 65.0% |
| !! | GGCTGCCGAACTTGCTGCCT+TGG | - | chr5.1:6930304-6930323 | None:intergenic | 65.0% |
| ! | TGCGGGAGCTCTAGTGCGCC+GGG | - | chr5.1:6928459-6928478 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 6926205 | 6931879 | 6926205 | ID=MS.gene059687 |
| chr5.1 | mRNA | 6926205 | 6931879 | 6926205 | ID=MS.gene059687.t1;Parent=MS.gene059687 |
| chr5.1 | exon | 6926205 | 6926467 | 6926205 | ID=MS.gene059687.t1.exon1;Parent=MS.gene059687.t1 |
| chr5.1 | CDS | 6926205 | 6926467 | 6926205 | ID=cds.MS.gene059687.t1;Parent=MS.gene059687.t1 |
| chr5.1 | exon | 6927444 | 6927543 | 6927444 | ID=MS.gene059687.t1.exon2;Parent=MS.gene059687.t1 |
| chr5.1 | CDS | 6927444 | 6927543 | 6927444 | ID=cds.MS.gene059687.t1;Parent=MS.gene059687.t1 |
| chr5.1 | exon | 6927726 | 6927806 | 6927726 | ID=MS.gene059687.t1.exon3;Parent=MS.gene059687.t1 |
| chr5.1 | CDS | 6927726 | 6927806 | 6927726 | ID=cds.MS.gene059687.t1;Parent=MS.gene059687.t1 |
| chr5.1 | exon | 6927920 | 6928024 | 6927920 | ID=MS.gene059687.t1.exon4;Parent=MS.gene059687.t1 |
| chr5.1 | CDS | 6927920 | 6928024 | 6927920 | ID=cds.MS.gene059687.t1;Parent=MS.gene059687.t1 |
| chr5.1 | exon | 6930220 | 6930432 | 6930220 | ID=MS.gene059687.t1.exon5;Parent=MS.gene059687.t1 |
| chr5.1 | CDS | 6930220 | 6930432 | 6930220 | ID=cds.MS.gene059687.t1;Parent=MS.gene059687.t1 |
| chr5.1 | exon | 6931772 | 6931879 | 6931772 | ID=MS.gene059687.t1.exon6;Parent=MS.gene059687.t1 |
| chr5.1 | CDS | 6931772 | 6931879 | 6931772 | ID=cds.MS.gene059687.t1;Parent=MS.gene059687.t1 |
| Gene Sequence |
| Protein sequence |
