Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060478.t1 | XP_013444541.1 | 92.9 | 281 | 8 | 1 | 1 | 269 | 1 | 281 | 3.40E-116 | 427.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060478.t1 | Q9FI03 | 34.0 | 153 | 99 | 1 | 93 | 243 | 34 | 186 | 5.6e-19 | 96.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060478.t1 | A0A072TMX2 | 92.9 | 281 | 8 | 1 | 1 | 269 | 1 | 281 | 2.4e-116 | 427.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060478 | MS.gene08516 | 0.898523 | 4.88E-77 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050363 | MS.gene060478 | PPI |
| MS.gene060478 | MS.gene025640 | PPI |
| MS.gene007146 | MS.gene060478 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060478.t1 | MTR_8g024250 | 93.950 | 281 | 5 | 1 | 1 | 269 | 1 | 281 | 0.0 | 536 |
| MS.gene060478.t1 | MTR_7g118270 | 63.784 | 185 | 67 | 0 | 84 | 268 | 44 | 228 | 4.42e-89 | 264 |
| MS.gene060478.t1 | MTR_7g106050 | 37.013 | 154 | 97 | 0 | 90 | 243 | 24 | 177 | 7.49e-30 | 112 |
| MS.gene060478.t1 | MTR_4g051880 | 34.507 | 142 | 85 | 1 | 110 | 243 | 45 | 186 | 4.10e-22 | 91.7 |
| MS.gene060478.t1 | MTR_3g092790 | 33.333 | 150 | 99 | 1 | 109 | 258 | 49 | 197 | 6.37e-22 | 90.9 |
| MS.gene060478.t1 | MTR_2g086790 | 30.233 | 172 | 107 | 3 | 84 | 243 | 17 | 187 | 1.76e-20 | 87.4 |
| MS.gene060478.t1 | MTR_1g057420 | 30.464 | 151 | 105 | 0 | 105 | 255 | 39 | 189 | 2.51e-20 | 86.7 |
| MS.gene060478.t1 | MTR_2g011350 | 25.949 | 158 | 113 | 3 | 97 | 252 | 35 | 190 | 3.23e-15 | 72.8 |
| MS.gene060478.t1 | MTR_5g087760 | 26.705 | 176 | 117 | 6 | 83 | 247 | 60 | 234 | 9.71e-13 | 66.6 |
| MS.gene060478.t1 | MTR_4g119428 | 25.658 | 152 | 109 | 3 | 96 | 245 | 65 | 214 | 6.29e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060478.t1 | AT4G01410 | 49.462 | 186 | 94 | 0 | 83 | 268 | 41 | 226 | 7.97e-57 | 182 |
| MS.gene060478.t1 | AT3G44220 | 29.609 | 179 | 123 | 1 | 93 | 268 | 27 | 205 | 9.78e-25 | 98.6 |
| MS.gene060478.t1 | AT3G52470 | 30.058 | 173 | 119 | 2 | 84 | 255 | 17 | 188 | 9.82e-25 | 98.6 |
| MS.gene060478.t1 | AT5G53730 | 33.557 | 149 | 97 | 1 | 97 | 243 | 38 | 186 | 1.80e-24 | 97.8 |
| MS.gene060478.t1 | AT2G35960 | 30.968 | 155 | 107 | 0 | 101 | 255 | 36 | 190 | 9.63e-24 | 95.9 |
| MS.gene060478.t1 | AT5G22200 | 32.692 | 156 | 105 | 0 | 105 | 260 | 43 | 198 | 3.07e-23 | 94.7 |
| MS.gene060478.t1 | AT5G06330 | 35.220 | 159 | 93 | 7 | 105 | 257 | 39 | 193 | 4.00e-23 | 94.4 |
| MS.gene060478.t1 | AT3G11660 | 33.735 | 166 | 101 | 7 | 83 | 243 | 16 | 177 | 9.84e-23 | 93.2 |
| MS.gene060478.t1 | AT4G09590 | 29.814 | 161 | 113 | 0 | 87 | 247 | 23 | 183 | 1.02e-22 | 93.2 |
| MS.gene060478.t1 | AT2G35970 | 30.435 | 161 | 112 | 0 | 87 | 247 | 23 | 183 | 3.51e-22 | 91.7 |
| MS.gene060478.t1 | AT5G22870 | 27.933 | 179 | 122 | 2 | 72 | 244 | 9 | 186 | 8.22e-17 | 77.4 |
| MS.gene060478.t1 | AT4G05220 | 24.405 | 168 | 125 | 2 | 87 | 254 | 47 | 212 | 7.92e-16 | 75.1 |
| MS.gene060478.t1 | AT1G61760 | 27.374 | 179 | 127 | 2 | 87 | 264 | 45 | 221 | 1.91e-15 | 73.9 |
| MS.gene060478.t1 | AT2G35980 | 27.848 | 158 | 113 | 1 | 90 | 246 | 45 | 202 | 3.86e-13 | 67.4 |
| MS.gene060478.t1 | AT5G06320 | 29.787 | 188 | 117 | 6 | 88 | 268 | 51 | 230 | 5.88e-11 | 61.2 |
Find 69 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACGTGGTTGTTCCATTTC+AGG | 0.182704 | 8.1:-76036190 | None:intergenic |
| GTGGGTCAGATTCCTCTTAT+TGG | 0.186108 | 8.1:+76036838 | MS.gene060478:CDS |
| TGTCGTGGTTGTTCCATTTC+GGG | 0.198552 | 8.1:-76036232 | None:intergenic |
| GCATTATAATCCTCATCTTA+TGG | 0.245398 | 8.1:+76036371 | MS.gene060478:CDS |
| TTGTCGTGGTTGTTCCATTT+CGG | 0.261861 | 8.1:-76036233 | None:intergenic |
| CATATGCAGTGTTCACGTTT+TGG | 0.295207 | 8.1:-76036322 | None:intergenic |
| TTCAAAACATCCACCGAAAC+TGG | 0.309717 | 8.1:-76036667 | None:intergenic |
| TTGGTGTTGGATGAGAATTA+TGG | 0.323767 | 8.1:+76036694 | MS.gene060478:CDS |
| TGGTGTTGGATGAGAATTAT+GGG | 0.333006 | 8.1:+76036695 | MS.gene060478:CDS |
| TAAATGGATACACGTTTGTT+TGG | 0.340333 | 8.1:-76036514 | None:intergenic |
| GGAAAGCCTGTCAAAGTAAA+TGG | 0.359178 | 8.1:-76036530 | None:intergenic |
| TGTGAATGGGGTTGTTGGTT+AGG | 0.359389 | 8.1:-76036118 | None:intergenic |
| TATGCTTCCATCGCTTTACT+TGG | 0.363370 | 8.1:+76036594 | MS.gene060478:CDS |
| AGGCGTGCCGGTTCCAGTTT+CGG | 0.370573 | 8.1:+76036654 | MS.gene060478:CDS |
| GTCACAAGTGCTGCAATCTA+TGG | 0.378150 | 8.1:+76036427 | MS.gene060478:CDS |
| ACAATCTTCTTCCTCGTACT+TGG | 0.399240 | 8.1:+76036349 | MS.gene060478:CDS |
| AGCATATGATGAGGCGTAAT+CGG | 0.403211 | 8.1:-76036577 | None:intergenic |
| ACCGGCACGCCTCCTAAAAC+TGG | 0.405172 | 8.1:-76036643 | None:intergenic |
| GCCAAGTGTGATTTATTGTT+GGG | 0.416075 | 8.1:+76036799 | MS.gene060478:CDS |
| TGCAATTTACAATCTTCATA+AGG | 0.420084 | 8.1:+76036488 | MS.gene060478:CDS |
| GGCAGGTTGAGGTGGAAAAC+TGG | 0.421371 | 8.1:+76036745 | MS.gene060478:CDS |
| GGATGAGAATTATGGGGTGG+TGG | 0.422334 | 8.1:+76036702 | MS.gene060478:CDS |
| AACCATACCTTTGTGTTCCA+TGG | 0.429303 | 8.1:-76036275 | None:intergenic |
| TGCCAAGTGTGATTTATTGT+TGG | 0.432416 | 8.1:+76036798 | MS.gene060478:CDS |
| ACGTCGTCAATACCCTGAAA+TGG | 0.435785 | 8.1:+76036177 | MS.gene060478:CDS |
| GTGTATCCATTTACTTTGAC+AGG | 0.438624 | 8.1:+76036524 | MS.gene060478:CDS |
| CATGTATCCACATCACAAAC+TGG | 0.441248 | 8.1:-76036865 | None:intergenic |
| TTATTGTTGGGTTTGAAGAA+AGG | 0.446899 | 8.1:+76036811 | MS.gene060478:CDS |
| GACGTGGTTGTTCCATTTCA+GGG | 0.447247 | 8.1:-76036189 | None:intergenic |
| GATGAGAATTATGGGGTGGT+GGG | 0.453278 | 8.1:+76036703 | MS.gene060478:CDS |
| ACGTCATCAATATCCCGAAA+TGG | 0.462255 | 8.1:+76036219 | MS.gene060478:CDS |
| GATGTTGTGAATGGGGTTGT+TGG | 0.473428 | 8.1:-76036123 | None:intergenic |
| TGAAACTTATATTTCAAGGC+AGG | 0.482813 | 8.1:+76036728 | MS.gene060478:CDS |
| GGTGTGAAACTTATATTTCA+AGG | 0.486868 | 8.1:+76036724 | MS.gene060478:CDS |
| CAAACTGGAGCACCAATAAG+AGG | 0.488904 | 8.1:-76036850 | None:intergenic |
| ACATCCACCGAAACTGGAAC+CGG | 0.491068 | 8.1:-76036661 | None:intergenic |
| TGCATTGAGATTGACATGTC+TGG | 0.499930 | 8.1:-76036469 | None:intergenic |
| GGTTTGAAGAAAGGTCTTGT+GGG | 0.505112 | 8.1:+76036820 | MS.gene060478:CDS |
| TTATATTTCAAGGCAGGTTG+AGG | 0.505575 | 8.1:+76036734 | MS.gene060478:CDS |
| AGGGAAATGATGTTGTGAAT+GGG | 0.518707 | 8.1:-76036131 | None:intergenic |
| TAGGGAAATGATGTTGTGAA+TGG | 0.522309 | 8.1:-76036132 | None:intergenic |
| ACCATACCTTTGTGTTCCAT+GGG | 0.526647 | 8.1:-76036274 | None:intergenic |
| GGGTTTGAAGAAAGGTCTTG+TGG | 0.531873 | 8.1:+76036819 | MS.gene060478:CDS |
| TGACGACGTTGTTGTTGTTG+TGG | 0.538741 | 8.1:-76036163 | None:intergenic |
| TCCCATGGAACACAAAGGTA+TGG | 0.547214 | 8.1:+76036273 | MS.gene060478:CDS |
| GGTGTTGGATGAGAATTATG+GGG | 0.556537 | 8.1:+76036696 | MS.gene060478:CDS |
| TATTTCAAGGCAGGTTGAGG+TGG | 0.558650 | 8.1:+76036737 | MS.gene060478:CDS |
| TGCTTCTCCAAGTAAAGCGA+TGG | 0.561546 | 8.1:-76036601 | None:intergenic |
| TGGTGCTCCAGTTTGTGATG+TGG | 0.562878 | 8.1:+76036858 | MS.gene060478:CDS |
| GGGAAATGATGTTGTGAATG+GGG | 0.563425 | 8.1:-76036130 | None:intergenic |
| ACCCAACAATAAATCACACT+TGG | 0.575443 | 8.1:-76036800 | None:intergenic |
| TGATGTCGTTGTTGTTGTCG+TGG | 0.587065 | 8.1:-76036247 | None:intergenic |
| TATGATGAGGCGTAATCGGA+TGG | 0.604145 | 8.1:-76036573 | None:intergenic |
| CGTGCCGGTTCCAGTTTCGG+TGG | 0.607622 | 8.1:+76036657 | MS.gene060478:CDS |
| ACAACGACATCAATATCCCA+TGG | 0.615164 | 8.1:+76036258 | MS.gene060478:CDS |
| GCACTTGTGACTGTGATGTG+AGG | 0.630907 | 8.1:-76036415 | None:intergenic |
| TGATGACGTTGTTGTTGACG+TGG | 0.649666 | 8.1:-76036205 | None:intergenic |
| GGTATGCAAGCCATAAGATG+AGG | 0.669740 | 8.1:-76036381 | None:intergenic |
| ATGGTTTCTATATGACACAA+AGG | 0.671270 | 8.1:-76036554 | None:intergenic |
| AGCGATGGAAGCATATGATG+AGG | 0.674282 | 8.1:-76036586 | None:intergenic |
| GGATTATAATGCCAAGTACG+AGG | 0.674453 | 8.1:-76036360 | None:intergenic |
| CAATATCCCATGGAACACAA+AGG | 0.680881 | 8.1:+76036268 | MS.gene060478:CDS |
| GTTGGATGAGAATTATGGGG+TGG | 0.688698 | 8.1:+76036699 | MS.gene060478:CDS |
| GGAGAAGCATGAAACCGTGT+CGG | 0.692283 | 8.1:+76036615 | MS.gene060478:CDS |
| TAAAACTGGTGATACCGACA+CGG | 0.699605 | 8.1:-76036629 | None:intergenic |
| ATTGAGATTGACATGTCTGG+TGG | 0.701504 | 8.1:-76036466 | None:intergenic |
| GTTTCTATATGACACAAAGG+CGG | 0.718743 | 8.1:-76036551 | None:intergenic |
| GCATTAGGTACTCTATAACG+AGG | 0.741839 | 8.1:-76036298 | None:intergenic |
| CTGGTGGTGAAGTTGCATTG+AGG | 0.741850 | 8.1:-76036450 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TGCAATTTACAATCTTCATA+AGG | + | chr8.1:76036488-76036507 | MS.gene060478:CDS | 25.0% |
| ATGGTTTCTATATGACACAA+AGG | - | chr8.1:76036557-76036576 | None:intergenic | 30.0% | |
| GCATTATAATCCTCATCTTA+TGG | + | chr8.1:76036371-76036390 | MS.gene060478:CDS | 30.0% | |
| GGTGTGAAACTTATATTTCA+AGG | + | chr8.1:76036724-76036743 | MS.gene060478:CDS | 30.0% | |
| TAAATGGATACACGTTTGTT+TGG | - | chr8.1:76036517-76036536 | None:intergenic | 30.0% | |
| TGAAACTTATATTTCAAGGC+AGG | + | chr8.1:76036728-76036747 | MS.gene060478:CDS | 30.0% | |
| TTATTGTTGGGTTTGAAGAA+AGG | + | chr8.1:76036811-76036830 | MS.gene060478:CDS | 30.0% | |
| ACCCAACAATAAATCACACT+TGG | - | chr8.1:76036803-76036822 | None:intergenic | 35.0% | |
| AGGGAAATGATGTTGTGAAT+GGG | - | chr8.1:76036134-76036153 | None:intergenic | 35.0% | |
| GCCAAGTGTGATTTATTGTT+GGG | + | chr8.1:76036799-76036818 | MS.gene060478:CDS | 35.0% | |
| GTGTATCCATTTACTTTGAC+AGG | + | chr8.1:76036524-76036543 | MS.gene060478:CDS | 35.0% | |
| GTTTCTATATGACACAAAGG+CGG | - | chr8.1:76036554-76036573 | None:intergenic | 35.0% | |
| TAGGGAAATGATGTTGTGAA+TGG | - | chr8.1:76036135-76036154 | None:intergenic | 35.0% | |
| TGCCAAGTGTGATTTATTGT+TGG | + | chr8.1:76036798-76036817 | MS.gene060478:CDS | 35.0% | |
| TTATATTTCAAGGCAGGTTG+AGG | + | chr8.1:76036734-76036753 | MS.gene060478:CDS | 35.0% | |
| ! | GTTGTTGTGGCATTTTGTTA+GGG | - | chr8.1:76036153-76036172 | None:intergenic | 35.0% |
| ! | TGGTGTTGGATGAGAATTAT+GGG | + | chr8.1:76036695-76036714 | MS.gene060478:CDS | 35.0% |
| ! | TGTTGTTGTGGCATTTTGTT+AGG | - | chr8.1:76036154-76036173 | None:intergenic | 35.0% |
| !! | TTGGTGTTGGATGAGAATTA+TGG | + | chr8.1:76036694-76036713 | MS.gene060478:CDS | 35.0% |
| !!! | TGTTTTGAATGGTTTGGTGT+TGG | + | chr8.1:76036681-76036700 | MS.gene060478:CDS | 35.0% |
| AACCATACCTTTGTGTTCCA+TGG | - | chr8.1:76036278-76036297 | None:intergenic | 40.0% | |
| ACAACGACATCAATATCCCA+TGG | + | chr8.1:76036258-76036277 | MS.gene060478:CDS | 40.0% | |
| ACAATCTTCTTCCTCGTACT+TGG | + | chr8.1:76036349-76036368 | MS.gene060478:CDS | 40.0% | |
| ACCATACCTTTGTGTTCCAT+GGG | - | chr8.1:76036277-76036296 | None:intergenic | 40.0% | |
| ACGTCATCAATATCCCGAAA+TGG | + | chr8.1:76036219-76036238 | MS.gene060478:CDS | 40.0% | |
| AGCATATGATGAGGCGTAAT+CGG | - | chr8.1:76036580-76036599 | None:intergenic | 40.0% | |
| ATTGAGATTGACATGTCTGG+TGG | - | chr8.1:76036469-76036488 | None:intergenic | 40.0% | |
| CAATATCCCATGGAACACAA+AGG | + | chr8.1:76036268-76036287 | MS.gene060478:CDS | 40.0% | |
| CATGTATCCACATCACAAAC+TGG | - | chr8.1:76036868-76036887 | None:intergenic | 40.0% | |
| GCATTAGGTACTCTATAACG+AGG | - | chr8.1:76036301-76036320 | None:intergenic | 40.0% | |
| GGAAAGCCTGTCAAAGTAAA+TGG | - | chr8.1:76036533-76036552 | None:intergenic | 40.0% | |
| GGATTATAATGCCAAGTACG+AGG | - | chr8.1:76036363-76036382 | None:intergenic | 40.0% | |
| GGGAAATGATGTTGTGAATG+GGG | - | chr8.1:76036133-76036152 | None:intergenic | 40.0% | |
| TAAAACTGGTGATACCGACA+CGG | - | chr8.1:76036632-76036651 | None:intergenic | 40.0% | |
| TATGCTTCCATCGCTTTACT+TGG | + | chr8.1:76036594-76036613 | MS.gene060478:CDS | 40.0% | |
| TGCATTGAGATTGACATGTC+TGG | - | chr8.1:76036472-76036491 | None:intergenic | 40.0% | |
| TTCAAAACATCCACCGAAAC+TGG | - | chr8.1:76036670-76036689 | None:intergenic | 40.0% | |
| TTGTCGTGGTTGTTCCATTT+CGG | - | chr8.1:76036236-76036255 | None:intergenic | 40.0% | |
| ! | CATATGCAGTGTTCACGTTT+TGG | - | chr8.1:76036325-76036344 | None:intergenic | 40.0% |
| ! | GGTGTTGGATGAGAATTATG+GGG | + | chr8.1:76036696-76036715 | MS.gene060478:CDS | 40.0% |
| ! | GGTTTGAAGAAAGGTCTTGT+GGG | + | chr8.1:76036820-76036839 | MS.gene060478:CDS | 40.0% |
| !! | ACTGTGATGTGAGGTTTTGA+GGG | - | chr8.1:76036409-76036428 | None:intergenic | 40.0% |
| !! | GGTGGATGTTTTGAATGGTT+TGG | + | chr8.1:76036675-76036694 | MS.gene060478:CDS | 40.0% |
| !! | GTTTCGGTGGATGTTTTGAA+TGG | + | chr8.1:76036670-76036689 | MS.gene060478:CDS | 40.0% |
| !!! | TGTTCACGTTTTGGAGCATT+AGG | - | chr8.1:76036316-76036335 | None:intergenic | 40.0% |
| ACGTCGTCAATACCCTGAAA+TGG | + | chr8.1:76036177-76036196 | MS.gene060478:CDS | 45.0% | |
| GACGTGGTTGTTCCATTTCA+GGG | - | chr8.1:76036192-76036211 | None:intergenic | 45.0% | |
| GATGAGAATTATGGGGTGGT+GGG | + | chr8.1:76036703-76036722 | MS.gene060478:CDS | 45.0% | |
| GATGTTGTGAATGGGGTTGT+TGG | - | chr8.1:76036126-76036145 | None:intergenic | 45.0% | |
| GGGTTTGAAGAAAGGTCTTG+TGG | + | chr8.1:76036819-76036838 | MS.gene060478:CDS | 45.0% | |
| GGTATGCAAGCCATAAGATG+AGG | - | chr8.1:76036384-76036403 | None:intergenic | 45.0% | |
| GTGGGTCAGATTCCTCTTAT+TGG | + | chr8.1:76036838-76036857 | MS.gene060478:CDS | 45.0% | |
| GTTGGATGAGAATTATGGGG+TGG | + | chr8.1:76036699-76036718 | MS.gene060478:CDS | 45.0% | |
| TATGATGAGGCGTAATCGGA+TGG | - | chr8.1:76036576-76036595 | None:intergenic | 45.0% | |
| TCCCATGGAACACAAAGGTA+TGG | + | chr8.1:76036273-76036292 | MS.gene060478:CDS | 45.0% | |
| TGACGTGGTTGTTCCATTTC+AGG | - | chr8.1:76036193-76036212 | None:intergenic | 45.0% | |
| TGCTTCTCCAAGTAAAGCGA+TGG | - | chr8.1:76036604-76036623 | None:intergenic | 45.0% | |
| TGTCGTGGTTGTTCCATTTC+GGG | - | chr8.1:76036235-76036254 | None:intergenic | 45.0% | |
| ! | AGCGATGGAAGCATATGATG+AGG | - | chr8.1:76036589-76036608 | None:intergenic | 45.0% |
| ! | CAAACTGGAGCACCAATAAG+AGG | - | chr8.1:76036853-76036872 | None:intergenic | 45.0% |
| ! | GACTGTGATGTGAGGTTTTG+AGG | - | chr8.1:76036410-76036429 | None:intergenic | 45.0% |
| ! | GTCACAAGTGCTGCAATCTA+TGG | + | chr8.1:76036427-76036446 | MS.gene060478:CDS | 45.0% |
| ! | TATTTCAAGGCAGGTTGAGG+TGG | + | chr8.1:76036737-76036756 | MS.gene060478:CDS | 45.0% |
| ! | TGACGACGTTGTTGTTGTTG+TGG | - | chr8.1:76036166-76036185 | None:intergenic | 45.0% |
| ! | TGATGACGTTGTTGTTGACG+TGG | - | chr8.1:76036208-76036227 | None:intergenic | 45.0% |
| ! | TGATGTCGTTGTTGTTGTCG+TGG | - | chr8.1:76036250-76036269 | None:intergenic | 45.0% |
| ! | TGTGAATGGGGTTGTTGGTT+AGG | - | chr8.1:76036121-76036140 | None:intergenic | 45.0% |
| !! | GTGTCGGTATCACCAGTTTT+AGG | + | chr8.1:76036631-76036650 | MS.gene060478:CDS | 45.0% |
| !!! | TCGGTATCACCAGTTTTAGG+AGG | + | chr8.1:76036634-76036653 | MS.gene060478:CDS | 45.0% |
| !!! | TGATGTGAGGTTTTGAGGGA+TGG | - | chr8.1:76036405-76036424 | None:intergenic | 45.0% |
| ACATCCACCGAAACTGGAAC+CGG | - | chr8.1:76036664-76036683 | None:intergenic | 50.0% | |
| GCACTTGTGACTGTGATGTG+AGG | - | chr8.1:76036418-76036437 | None:intergenic | 50.0% | |
| GGATGAGAATTATGGGGTGG+TGG | + | chr8.1:76036702-76036721 | MS.gene060478:CDS | 50.0% | |
| TGGTGCTCCAGTTTGTGATG+TGG | + | chr8.1:76036858-76036877 | MS.gene060478:CDS | 50.0% | |
| ! | CTGGTGGTGAAGTTGCATTG+AGG | - | chr8.1:76036453-76036472 | None:intergenic | 50.0% |
| ! | GGAGAAGCATGAAACCGTGT+CGG | + | chr8.1:76036615-76036634 | MS.gene060478:CDS | 50.0% |
| ! | GGCAGGTTGAGGTGGAAAAC+TGG | + | chr8.1:76036745-76036764 | MS.gene060478:CDS | 55.0% |
| !!! | ACCAGTTTTAGGAGGCGTGC+CGG | + | chr8.1:76036642-76036661 | MS.gene060478:CDS | 55.0% |
| ACCGGCACGCCTCCTAAAAC+TGG | - | chr8.1:76036646-76036665 | None:intergenic | 60.0% | |
| !! | AGGCGTGCCGGTTCCAGTTT+CGG | + | chr8.1:76036654-76036673 | MS.gene060478:CDS | 60.0% |
| !! | CGTGCCGGTTCCAGTTTCGG+TGG | + | chr8.1:76036657-76036676 | MS.gene060478:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 76036079 | 76036888 | 76036079 | ID=MS.gene060478 |
| chr8.1 | mRNA | 76036079 | 76036888 | 76036079 | ID=MS.gene060478.t1;Parent=MS.gene060478 |
| chr8.1 | exon | 76036079 | 76036888 | 76036079 | ID=MS.gene060478.t1.exon1;Parent=MS.gene060478.t1 |
| chr8.1 | CDS | 76036079 | 76036888 | 76036079 | ID=cds.MS.gene060478.t1;Parent=MS.gene060478.t1 |
| Gene Sequence |
| Protein sequence |
