Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08516.t1 | XP_013444541.1 | 97.2 | 283 | 6 | 1 | 1 | 283 | 1 | 281 | 6.10E-116 | 427.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08516.t1 | Q9FI03 | 34.0 | 153 | 99 | 1 | 107 | 257 | 34 | 186 | 5.9e-19 | 96.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08516.t1 | A0A072TMX2 | 97.2 | 283 | 6 | 1 | 1 | 283 | 1 | 281 | 4.4e-116 | 427.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060478 | MS.gene08516 | 0.898523 | 4.88E-77 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene08516 | MS.gene025640 | PPI |
| MS.gene08516 | MS.gene007146 | PPI |
| MS.gene050363 | MS.gene08516 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08516.t1 | MTR_8g024250 | 97.173 | 283 | 6 | 1 | 1 | 283 | 1 | 281 | 0.0 | 563 |
| MS.gene08516.t1 | MTR_7g118270 | 63.784 | 185 | 67 | 0 | 98 | 282 | 44 | 228 | 3.77e-89 | 265 |
| MS.gene08516.t1 | MTR_7g106050 | 37.013 | 154 | 97 | 0 | 104 | 257 | 24 | 177 | 1.56e-29 | 111 |
| MS.gene08516.t1 | MTR_4g051880 | 34.507 | 142 | 85 | 1 | 124 | 257 | 45 | 186 | 7.47e-22 | 91.3 |
| MS.gene08516.t1 | MTR_3g092790 | 33.333 | 150 | 99 | 1 | 123 | 272 | 49 | 197 | 1.28e-21 | 90.5 |
| MS.gene08516.t1 | MTR_2g086790 | 30.233 | 172 | 107 | 3 | 98 | 257 | 17 | 187 | 3.36e-20 | 87.0 |
| MS.gene08516.t1 | MTR_1g057420 | 30.464 | 151 | 105 | 0 | 119 | 269 | 39 | 189 | 5.51e-20 | 86.3 |
| MS.gene08516.t1 | MTR_2g011350 | 25.949 | 158 | 113 | 3 | 111 | 266 | 35 | 190 | 5.09e-15 | 72.4 |
| MS.gene08516.t1 | MTR_5g087760 | 26.705 | 176 | 117 | 6 | 97 | 261 | 60 | 234 | 1.85e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08516.t1 | AT4G01410 | 49.462 | 186 | 94 | 0 | 97 | 282 | 41 | 226 | 1.11e-56 | 182 |
| MS.gene08516.t1 | AT3G44220 | 29.609 | 179 | 123 | 1 | 107 | 282 | 27 | 205 | 2.01e-24 | 97.8 |
| MS.gene08516.t1 | AT3G52470 | 30.857 | 175 | 115 | 4 | 98 | 269 | 17 | 188 | 2.70e-24 | 97.8 |
| MS.gene08516.t1 | AT5G53730 | 33.557 | 149 | 97 | 1 | 111 | 257 | 38 | 186 | 4.41e-24 | 97.4 |
| MS.gene08516.t1 | AT2G35960 | 30.968 | 155 | 107 | 0 | 115 | 269 | 36 | 190 | 2.34e-23 | 95.1 |
| MS.gene08516.t1 | AT5G22200 | 32.692 | 156 | 105 | 0 | 119 | 274 | 43 | 198 | 5.26e-23 | 94.4 |
| MS.gene08516.t1 | AT5G06330 | 35.220 | 159 | 93 | 7 | 119 | 271 | 39 | 193 | 7.69e-23 | 94.0 |
| MS.gene08516.t1 | AT3G11660 | 33.735 | 166 | 101 | 7 | 97 | 257 | 16 | 177 | 1.73e-22 | 92.8 |
| MS.gene08516.t1 | AT4G09590 | 29.814 | 161 | 113 | 0 | 101 | 261 | 23 | 183 | 2.57e-22 | 92.4 |
| MS.gene08516.t1 | AT2G35970 | 30.435 | 161 | 112 | 0 | 101 | 261 | 23 | 183 | 9.57e-22 | 90.9 |
| MS.gene08516.t1 | AT5G22870 | 27.933 | 179 | 122 | 2 | 86 | 258 | 9 | 186 | 1.98e-16 | 76.6 |
| MS.gene08516.t1 | AT4G05220 | 24.405 | 168 | 125 | 2 | 101 | 268 | 47 | 212 | 1.45e-15 | 74.3 |
| MS.gene08516.t1 | AT1G61760 | 27.374 | 179 | 127 | 2 | 101 | 278 | 45 | 221 | 4.74e-15 | 73.2 |
| MS.gene08516.t1 | AT2G35980 | 27.848 | 158 | 113 | 1 | 104 | 260 | 45 | 202 | 8.66e-13 | 66.6 |
Find 73 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACGTGGTTGTTCCATTTC+AGG | 0.182704 | 8.3:-68151626 | None:intergenic |
| GTGGGTCAGATTCCTCTTAT+TGG | 0.186108 | 8.3:+68152316 | MS.gene08516:CDS |
| TGTCGTGGTTGTTCCATTTC+GGG | 0.198552 | 8.3:-68151710 | None:intergenic |
| TGACGTGGTTGTTCCATTTC+GGG | 0.199740 | 8.3:-68151668 | None:intergenic |
| GCATTATAATCCTCATCTTA+TGG | 0.245398 | 8.3:+68151849 | MS.gene08516:CDS |
| TTGTCGTGGTTGTTCCATTT+CGG | 0.261861 | 8.3:-68151711 | None:intergenic |
| TTGACGTGGTTGTTCCATTT+CGG | 0.262171 | 8.3:-68151669 | None:intergenic |
| CATATGCAGTGTTCACGTTT+TGG | 0.295207 | 8.3:-68151800 | None:intergenic |
| TTCAAAACATCCACCGAAAC+TGG | 0.309717 | 8.3:-68152145 | None:intergenic |
| TTGGTGTTGGATGAGAATTA+TGG | 0.323767 | 8.3:+68152172 | MS.gene08516:CDS |
| TGGTGTTGGATGAGAATTAT+GGG | 0.333006 | 8.3:+68152173 | MS.gene08516:CDS |
| TAAATGGATACACGTTTGTT+TGG | 0.340333 | 8.3:-68151992 | None:intergenic |
| GGAAAGCCTGTCAAAGTAAA+TGG | 0.359178 | 8.3:-68152008 | None:intergenic |
| TGTGAATGGGGTTGTTGGTT+AGG | 0.359389 | 8.3:-68151554 | None:intergenic |
| TATGCTTCCATCGCTTTACT+TGG | 0.363370 | 8.3:+68152072 | MS.gene08516:CDS |
| AGGCGTGCCGGTTCCAGTTT+CGG | 0.370573 | 8.3:+68152132 | MS.gene08516:CDS |
| GTCACAAGTGCTGCAATCTA+TGG | 0.378150 | 8.3:+68151905 | MS.gene08516:CDS |
| ACAATCTTCTTCCTCGTACT+TGG | 0.399240 | 8.3:+68151827 | MS.gene08516:CDS |
| AGCATATGATGAGGCGTAAT+CGG | 0.403211 | 8.3:-68152055 | None:intergenic |
| ACCGGCACGCCTCCTAAAAC+TGG | 0.405172 | 8.3:-68152121 | None:intergenic |
| GCCAAGTGTGATTTATTGTT+GGG | 0.416075 | 8.3:+68152277 | MS.gene08516:CDS |
| TGCAATTTACAATCTTCATA+AGG | 0.420084 | 8.3:+68151966 | MS.gene08516:CDS |
| GGCAGGTTGAGGTGGAAAAC+TGG | 0.421371 | 8.3:+68152223 | MS.gene08516:CDS |
| GGATGAGAATTATGGGGTGG+TGG | 0.422334 | 8.3:+68152180 | MS.gene08516:CDS |
| AACCATACCTTTGTGTTCCA+TGG | 0.429303 | 8.3:-68151753 | None:intergenic |
| TGCCAAGTGTGATTTATTGT+TGG | 0.432416 | 8.3:+68152276 | MS.gene08516:CDS |
| ACGTCGTCAATACCCTGAAA+TGG | 0.435785 | 8.3:+68151613 | MS.gene08516:CDS |
| GTGTATCCATTTACTTTGAC+AGG | 0.438624 | 8.3:+68152002 | MS.gene08516:CDS |
| TTATTGTTGGGTTTGAAGAA+AGG | 0.446899 | 8.3:+68152289 | MS.gene08516:CDS |
| GACGTGGTTGTTCCATTTCA+GGG | 0.447247 | 8.3:-68151625 | None:intergenic |
| GATGAGAATTATGGGGTGGT+GGG | 0.453278 | 8.3:+68152181 | MS.gene08516:CDS |
| TATGTATCCACATCACAAAC+TGG | 0.461285 | 8.3:-68152343 | None:intergenic |
| ACGTCATCAATATCCCGAAA+TGG | 0.462255 | 8.3:+68151655 | MS.gene08516:CDS |
| ACGTCATCAATATCCCGAAA+TGG | 0.462255 | 8.3:+68151697 | MS.gene08516:CDS |
| GATGTTGTGAATGGGGTTGT+TGG | 0.473428 | 8.3:-68151559 | None:intergenic |
| TGAAACTTATATTTCAAGGC+AGG | 0.482813 | 8.3:+68152206 | MS.gene08516:CDS |
| GGTGTGAAACTTATATTTCA+AGG | 0.486868 | 8.3:+68152202 | MS.gene08516:CDS |
| CAAACTGGAGCACCAATAAG+AGG | 0.488904 | 8.3:-68152328 | None:intergenic |
| ACATCCACCGAAACTGGAAC+CGG | 0.491068 | 8.3:-68152139 | None:intergenic |
| TGCATTGAGATTGACATGTC+TGG | 0.499930 | 8.3:-68151947 | None:intergenic |
| GGTTTGAAGAAAGGTCTTGT+GGG | 0.505112 | 8.3:+68152298 | MS.gene08516:CDS |
| TTATATTTCAAGGCAGGTTG+AGG | 0.505575 | 8.3:+68152212 | MS.gene08516:CDS |
| AGGGAAATGATGTTGTGAAT+GGG | 0.518707 | 8.3:-68151567 | None:intergenic |
| TAGGGAAATGATGTTGTGAA+TGG | 0.522309 | 8.3:-68151568 | None:intergenic |
| ACCATACCTTTGTGTTCCAT+GGG | 0.526647 | 8.3:-68151752 | None:intergenic |
| GGGTTTGAAGAAAGGTCTTG+TGG | 0.531873 | 8.3:+68152297 | MS.gene08516:CDS |
| TGACGACGTTGTTGTTGTTG+TGG | 0.538741 | 8.3:-68151599 | None:intergenic |
| TCCCATGGAACACAAAGGTA+TGG | 0.547214 | 8.3:+68151751 | MS.gene08516:CDS |
| GGTGTTGGATGAGAATTATG+GGG | 0.556537 | 8.3:+68152174 | MS.gene08516:CDS |
| TATTTCAAGGCAGGTTGAGG+TGG | 0.558650 | 8.3:+68152215 | MS.gene08516:CDS |
| TGCTTCTCCAAGTAAAGCGA+TGG | 0.561546 | 8.3:-68152079 | None:intergenic |
| TGGTGCTCCAGTTTGTGATG+TGG | 0.562878 | 8.3:+68152336 | MS.gene08516:CDS |
| GGGAAATGATGTTGTGAATG+GGG | 0.563425 | 8.3:-68151566 | None:intergenic |
| ACCCAACAATAAATCACACT+TGG | 0.575443 | 8.3:-68152278 | None:intergenic |
| TGATGTCGTTGTTGTTGTCG+TGG | 0.587065 | 8.3:-68151725 | None:intergenic |
| TATGATGAGGCGTAATCGGA+TGG | 0.604145 | 8.3:-68152051 | None:intergenic |
| CGTGCCGGTTCCAGTTTCGG+TGG | 0.607622 | 8.3:+68152135 | MS.gene08516:CDS |
| ACAACGACATCAATATCCCA+TGG | 0.615164 | 8.3:+68151736 | MS.gene08516:CDS |
| GCACTTGTGACTGTGATGTG+AGG | 0.630907 | 8.3:-68151893 | None:intergenic |
| TGATGACGTTGTTGTTGACG+TGG | 0.649666 | 8.3:-68151641 | None:intergenic |
| TGATGACGTTGTTGTTGACG+TGG | 0.649666 | 8.3:-68151683 | None:intergenic |
| GGTATGCAAGCCATAAGATG+AGG | 0.669740 | 8.3:-68151859 | None:intergenic |
| ATGGTTTCTATATGACACAA+AGG | 0.671270 | 8.3:-68152032 | None:intergenic |
| AGCGATGGAAGCATATGATG+AGG | 0.674282 | 8.3:-68152064 | None:intergenic |
| GGATTATAATGCCAAGTACG+AGG | 0.674453 | 8.3:-68151838 | None:intergenic |
| CAATATCCCATGGAACACAA+AGG | 0.680881 | 8.3:+68151746 | MS.gene08516:CDS |
| GTTGGATGAGAATTATGGGG+TGG | 0.688698 | 8.3:+68152177 | MS.gene08516:CDS |
| GGAGAAGCATGAAACCGTGT+CGG | 0.692283 | 8.3:+68152093 | MS.gene08516:CDS |
| TAAAACTGGTGATACCGACA+CGG | 0.699605 | 8.3:-68152107 | None:intergenic |
| ATTGAGATTGACATGTCTGG+TGG | 0.701504 | 8.3:-68151944 | None:intergenic |
| GTTTCTATATGACACAAAGG+CGG | 0.718743 | 8.3:-68152029 | None:intergenic |
| GCATTAGGTACTCTATAACG+AGG | 0.741839 | 8.3:-68151776 | None:intergenic |
| CTGGTGGTGAAGTTGCATTG+AGG | 0.741850 | 8.3:-68151928 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TGCAATTTACAATCTTCATA+AGG | + | chr8.3:68151966-68151985 | MS.gene08516:CDS | 25.0% |
| ATGGTTTCTATATGACACAA+AGG | - | chr8.3:68152035-68152054 | None:intergenic | 30.0% | |
| GCATTATAATCCTCATCTTA+TGG | + | chr8.3:68151849-68151868 | MS.gene08516:CDS | 30.0% | |
| GGTGTGAAACTTATATTTCA+AGG | + | chr8.3:68152202-68152221 | MS.gene08516:CDS | 30.0% | |
| TAAATGGATACACGTTTGTT+TGG | - | chr8.3:68151995-68152014 | None:intergenic | 30.0% | |
| TGAAACTTATATTTCAAGGC+AGG | + | chr8.3:68152206-68152225 | MS.gene08516:CDS | 30.0% | |
| TTATTGTTGGGTTTGAAGAA+AGG | + | chr8.3:68152289-68152308 | MS.gene08516:CDS | 30.0% | |
| ACCCAACAATAAATCACACT+TGG | - | chr8.3:68152281-68152300 | None:intergenic | 35.0% | |
| AGGGAAATGATGTTGTGAAT+GGG | - | chr8.3:68151570-68151589 | None:intergenic | 35.0% | |
| GCCAAGTGTGATTTATTGTT+GGG | + | chr8.3:68152277-68152296 | MS.gene08516:CDS | 35.0% | |
| GTGTATCCATTTACTTTGAC+AGG | + | chr8.3:68152002-68152021 | MS.gene08516:CDS | 35.0% | |
| GTTTCTATATGACACAAAGG+CGG | - | chr8.3:68152032-68152051 | None:intergenic | 35.0% | |
| TAGGGAAATGATGTTGTGAA+TGG | - | chr8.3:68151571-68151590 | None:intergenic | 35.0% | |
| TATGTATCCACATCACAAAC+TGG | - | chr8.3:68152346-68152365 | None:intergenic | 35.0% | |
| TGCCAAGTGTGATTTATTGT+TGG | + | chr8.3:68152276-68152295 | MS.gene08516:CDS | 35.0% | |
| TTATATTTCAAGGCAGGTTG+AGG | + | chr8.3:68152212-68152231 | MS.gene08516:CDS | 35.0% | |
| ! | GTTGTTGTGGCATTTTGTTA+GGG | - | chr8.3:68151589-68151608 | None:intergenic | 35.0% |
| ! | TGGTGTTGGATGAGAATTAT+GGG | + | chr8.3:68152173-68152192 | MS.gene08516:CDS | 35.0% |
| ! | TGTTGTTGTGGCATTTTGTT+AGG | - | chr8.3:68151590-68151609 | None:intergenic | 35.0% |
| !! | TTGGTGTTGGATGAGAATTA+TGG | + | chr8.3:68152172-68152191 | MS.gene08516:CDS | 35.0% |
| !!! | TGTTTTGAATGGTTTGGTGT+TGG | + | chr8.3:68152159-68152178 | MS.gene08516:CDS | 35.0% |
| AACCATACCTTTGTGTTCCA+TGG | - | chr8.3:68151756-68151775 | None:intergenic | 40.0% | |
| ACAACGACATCAATATCCCA+TGG | + | chr8.3:68151736-68151755 | MS.gene08516:CDS | 40.0% | |
| ACAATCTTCTTCCTCGTACT+TGG | + | chr8.3:68151827-68151846 | MS.gene08516:CDS | 40.0% | |
| ACCATACCTTTGTGTTCCAT+GGG | - | chr8.3:68151755-68151774 | None:intergenic | 40.0% | |
| ACGTCATCAATATCCCGAAA+TGG | + | chr8.3:68151655-68151674 | MS.gene08516:CDS | 40.0% | |
| AGCATATGATGAGGCGTAAT+CGG | - | chr8.3:68152058-68152077 | None:intergenic | 40.0% | |
| ATTGAGATTGACATGTCTGG+TGG | - | chr8.3:68151947-68151966 | None:intergenic | 40.0% | |
| CAATATCCCATGGAACACAA+AGG | + | chr8.3:68151746-68151765 | MS.gene08516:CDS | 40.0% | |
| GCATTAGGTACTCTATAACG+AGG | - | chr8.3:68151779-68151798 | None:intergenic | 40.0% | |
| GGAAAGCCTGTCAAAGTAAA+TGG | - | chr8.3:68152011-68152030 | None:intergenic | 40.0% | |
| GGATTATAATGCCAAGTACG+AGG | - | chr8.3:68151841-68151860 | None:intergenic | 40.0% | |
| GGGAAATGATGTTGTGAATG+GGG | - | chr8.3:68151569-68151588 | None:intergenic | 40.0% | |
| TAAAACTGGTGATACCGACA+CGG | - | chr8.3:68152110-68152129 | None:intergenic | 40.0% | |
| TATGCTTCCATCGCTTTACT+TGG | + | chr8.3:68152072-68152091 | MS.gene08516:CDS | 40.0% | |
| TGCATTGAGATTGACATGTC+TGG | - | chr8.3:68151950-68151969 | None:intergenic | 40.0% | |
| TTCAAAACATCCACCGAAAC+TGG | - | chr8.3:68152148-68152167 | None:intergenic | 40.0% | |
| TTGACGTGGTTGTTCCATTT+CGG | - | chr8.3:68151630-68151649 | None:intergenic | 40.0% | |
| TTGTCGTGGTTGTTCCATTT+CGG | - | chr8.3:68151714-68151733 | None:intergenic | 40.0% | |
| ! | CATATGCAGTGTTCACGTTT+TGG | - | chr8.3:68151803-68151822 | None:intergenic | 40.0% |
| ! | GGTGTTGGATGAGAATTATG+GGG | + | chr8.3:68152174-68152193 | MS.gene08516:CDS | 40.0% |
| ! | GGTTTGAAGAAAGGTCTTGT+GGG | + | chr8.3:68152298-68152317 | MS.gene08516:CDS | 40.0% |
| !! | ACTGTGATGTGAGGTTTTGA+GGG | - | chr8.3:68151887-68151906 | None:intergenic | 40.0% |
| !! | GGTGGATGTTTTGAATGGTT+TGG | + | chr8.3:68152153-68152172 | MS.gene08516:CDS | 40.0% |
| !! | GTTTCGGTGGATGTTTTGAA+TGG | + | chr8.3:68152148-68152167 | MS.gene08516:CDS | 40.0% |
| !!! | TGTTCACGTTTTGGAGCATT+AGG | - | chr8.3:68151794-68151813 | None:intergenic | 40.0% |
| ACGTCGTCAATACCCTGAAA+TGG | + | chr8.3:68151613-68151632 | MS.gene08516:CDS | 45.0% | |
| GACGTGGTTGTTCCATTTCA+GGG | - | chr8.3:68151628-68151647 | None:intergenic | 45.0% | |
| GATGAGAATTATGGGGTGGT+GGG | + | chr8.3:68152181-68152200 | MS.gene08516:CDS | 45.0% | |
| GATGTTGTGAATGGGGTTGT+TGG | - | chr8.3:68151562-68151581 | None:intergenic | 45.0% | |
| GGGTTTGAAGAAAGGTCTTG+TGG | + | chr8.3:68152297-68152316 | MS.gene08516:CDS | 45.0% | |
| GGTATGCAAGCCATAAGATG+AGG | - | chr8.3:68151862-68151881 | None:intergenic | 45.0% | |
| GTGGGTCAGATTCCTCTTAT+TGG | + | chr8.3:68152316-68152335 | MS.gene08516:CDS | 45.0% | |
| GTTGGATGAGAATTATGGGG+TGG | + | chr8.3:68152177-68152196 | MS.gene08516:CDS | 45.0% | |
| TATGATGAGGCGTAATCGGA+TGG | - | chr8.3:68152054-68152073 | None:intergenic | 45.0% | |
| TCCCATGGAACACAAAGGTA+TGG | + | chr8.3:68151751-68151770 | MS.gene08516:CDS | 45.0% | |
| TGACGTGGTTGTTCCATTTC+AGG | - | chr8.3:68151629-68151648 | None:intergenic | 45.0% | |
| TGACGTGGTTGTTCCATTTC+GGG | - | chr8.3:68151629-68151648 | None:intergenic | 45.0% | |
| TGCTTCTCCAAGTAAAGCGA+TGG | - | chr8.3:68152082-68152101 | None:intergenic | 45.0% | |
| TGTCGTGGTTGTTCCATTTC+GGG | - | chr8.3:68151713-68151732 | None:intergenic | 45.0% | |
| ! | AGCGATGGAAGCATATGATG+AGG | - | chr8.3:68152067-68152086 | None:intergenic | 45.0% |
| ! | CAAACTGGAGCACCAATAAG+AGG | - | chr8.3:68152331-68152350 | None:intergenic | 45.0% |
| ! | GACTGTGATGTGAGGTTTTG+AGG | - | chr8.3:68151888-68151907 | None:intergenic | 45.0% |
| ! | GTCACAAGTGCTGCAATCTA+TGG | + | chr8.3:68151905-68151924 | MS.gene08516:CDS | 45.0% |
| ! | TATTTCAAGGCAGGTTGAGG+TGG | + | chr8.3:68152215-68152234 | MS.gene08516:CDS | 45.0% |
| ! | TGACGACGTTGTTGTTGTTG+TGG | - | chr8.3:68151602-68151621 | None:intergenic | 45.0% |
| ! | TGATGACGTTGTTGTTGACG+TGG | - | chr8.3:68151644-68151663 | None:intergenic | 45.0% |
| ! | TGATGTCGTTGTTGTTGTCG+TGG | - | chr8.3:68151728-68151747 | None:intergenic | 45.0% |
| ! | TGTGAATGGGGTTGTTGGTT+AGG | - | chr8.3:68151557-68151576 | None:intergenic | 45.0% |
| !! | GTGTCGGTATCACCAGTTTT+AGG | + | chr8.3:68152109-68152128 | MS.gene08516:CDS | 45.0% |
| !!! | TCGGTATCACCAGTTTTAGG+AGG | + | chr8.3:68152112-68152131 | MS.gene08516:CDS | 45.0% |
| !!! | TGATGTGAGGTTTTGAGGGA+TGG | - | chr8.3:68151883-68151902 | None:intergenic | 45.0% |
| ACATCCACCGAAACTGGAAC+CGG | - | chr8.3:68152142-68152161 | None:intergenic | 50.0% | |
| GCACTTGTGACTGTGATGTG+AGG | - | chr8.3:68151896-68151915 | None:intergenic | 50.0% | |
| GGATGAGAATTATGGGGTGG+TGG | + | chr8.3:68152180-68152199 | MS.gene08516:CDS | 50.0% | |
| TGGTGCTCCAGTTTGTGATG+TGG | + | chr8.3:68152336-68152355 | MS.gene08516:CDS | 50.0% | |
| ! | CTGGTGGTGAAGTTGCATTG+AGG | - | chr8.3:68151931-68151950 | None:intergenic | 50.0% |
| ! | GGAGAAGCATGAAACCGTGT+CGG | + | chr8.3:68152093-68152112 | MS.gene08516:CDS | 50.0% |
| ! | GGCAGGTTGAGGTGGAAAAC+TGG | + | chr8.3:68152223-68152242 | MS.gene08516:CDS | 55.0% |
| !!! | ACCAGTTTTAGGAGGCGTGC+CGG | + | chr8.3:68152120-68152139 | MS.gene08516:CDS | 55.0% |
| ACCGGCACGCCTCCTAAAAC+TGG | - | chr8.3:68152124-68152143 | None:intergenic | 60.0% | |
| !! | AGGCGTGCCGGTTCCAGTTT+CGG | + | chr8.3:68152132-68152151 | MS.gene08516:CDS | 60.0% |
| !! | CGTGCCGGTTCCAGTTTCGG+TGG | + | chr8.3:68152135-68152154 | MS.gene08516:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 68151515 | 68152366 | 68151515 | ID=MS.gene08516 |
| chr8.3 | mRNA | 68151515 | 68152366 | 68151515 | ID=MS.gene08516.t1;Parent=MS.gene08516 |
| chr8.3 | exon | 68151515 | 68152366 | 68151515 | ID=MS.gene08516.t1.exon1;Parent=MS.gene08516.t1 |
| chr8.3 | CDS | 68151515 | 68152366 | 68151515 | ID=cds.MS.gene08516.t1;Parent=MS.gene08516.t1 |
| Gene Sequence |
| Protein sequence |
