AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene06130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06130.t1 MTR_8g098945 77.305 282 37 6 1 270 1 267 1.36e-135 384
MS.gene06130.t1 MTR_7g079040 38.148 270 126 9 9 240 4 270 1.18e-40 144
MS.gene06130.t1 MTR_2g032030 45.856 181 68 7 59 212 174 351 7.43e-38 139
MS.gene06130.t1 MTR_2g032030 45.856 181 68 7 59 212 174 351 2.32e-37 138
MS.gene06130.t1 MTR_8g028565 49.286 140 61 3 85 219 113 247 3.79e-37 135
MS.gene06130.t1 MTR_1g099600 54.198 131 50 5 99 225 149 273 9.09e-37 133
MS.gene06130.t1 MTR_2g016770 67.105 76 25 0 121 196 24 99 1.49e-32 119
MS.gene06130.t1 MTR_2g016770 67.105 76 25 0 121 196 16 91 1.84e-32 119
MS.gene06130.t1 MTR_7g109600 50.909 110 47 2 91 193 5 114 1.53e-30 115
MS.gene06130.t1 MTR_2g083870 55.319 94 34 1 107 192 47 140 8.45e-28 108
MS.gene06130.t1 MTR_8g087000 58.904 73 30 0 133 205 78 150 2.42e-27 107
MS.gene06130.t1 MTR_8g087000 58.904 73 30 0 133 205 77 149 2.68e-27 106
MS.gene06130.t1 MTR_2g024350 37.576 165 86 5 133 286 9 167 7.71e-24 97.1
MS.gene06130.t1 MTR_8g069935 45.385 130 64 4 104 230 302 427 1.33e-22 97.4
MS.gene06130.t1 MTR_8g067650 49.505 101 49 2 104 202 310 410 1.40e-22 97.4
MS.gene06130.t1 MTR_8g067635 49.505 101 49 2 104 202 320 420 2.06e-22 97.1
MS.gene06130.t1 MTR_2g024380 41.322 121 67 3 87 203 203 323 3.99e-22 95.9
MS.gene06130.t1 MTR_4g127040 51.163 86 42 0 106 191 219 304 5.05e-22 94.0
MS.gene06130.t1 MTR_1g009613 50.602 83 36 2 111 189 238 319 2.40e-21 92.4
MS.gene06130.t1 MTR_5g016610 63.158 57 21 0 133 189 200 256 6.03e-21 90.1
MS.gene06130.t1 MTR_4g094908 52.381 84 35 2 110 189 241 323 8.89e-21 90.9
MS.gene06130.t1 MTR_4g094588 50.617 81 38 2 131 210 177 256 2.22e-20 89.7
MS.gene06130.t1 MTR_1g070455 54.930 71 28 1 123 189 280 350 3.60e-20 89.4
MS.gene06130.t1 MTR_1g086790 50.704 71 33 2 131 200 157 226 5.74e-20 88.6
MS.gene06130.t1 MTR_7g011820 46.875 96 47 3 104 197 381 474 1.29e-19 89.0
MS.gene06130.t1 MTR_7g011820 47.887 71 33 3 127 195 223 291 1.49e-12 67.8
MS.gene06130.t1 MTR_3g108960 48.193 83 38 2 113 191 292 373 2.85e-19 87.4
MS.gene06130.t1 MTR_0117s0040 59.649 57 23 0 133 189 75 131 9.63e-19 83.6
MS.gene06130.t1 MTR_5g043880 41.053 95 55 1 95 189 87 180 4.14e-18 82.4
MS.gene06130.t1 MTR_4g082580 42.727 110 52 4 104 213 254 352 5.78e-18 83.6
MS.gene06130.t1 MTR_4g082580 43.939 66 36 1 127 192 140 204 4.70e-11 63.2
MS.gene06130.t1 MTR_5g091390 55.556 63 27 1 131 193 156 217 6.65e-18 82.4
MS.gene06130.t1 MTR_5g042920 49.333 75 36 2 118 192 307 379 1.13e-17 82.8
MS.gene06130.t1 MTR_5g042920 45.833 72 35 3 127 196 146 215 2.16e-12 67.4
MS.gene06130.t1 MTR_6g053200 41.935 93 45 1 112 195 301 393 1.75e-17 82.8
MS.gene06130.t1 MTR_3g056100 48.052 77 38 2 120 196 260 334 2.86e-17 82.0
MS.gene06130.t1 MTR_3g056100 44.444 72 36 3 126 195 93 162 8.32e-12 65.5
MS.gene06130.t1 MTR_3g056100 48.052 77 38 2 120 196 404 478 3.13e-17 82.0
MS.gene06130.t1 MTR_3g056100 44.444 72 36 3 126 195 237 306 8.90e-12 65.9
MS.gene06130.t1 MTR_3g056100 48.052 77 38 2 120 196 247 321 3.19e-17 81.6
MS.gene06130.t1 MTR_3g056100 44.444 72 36 3 126 195 93 162 9.09e-12 65.5
MS.gene06130.t1 MTR_3g056100 48.052 77 38 2 120 196 391 465 3.59e-17 82.0
MS.gene06130.t1 MTR_3g056100 44.444 72 36 3 126 195 237 306 1.04e-11 65.5
MS.gene06130.t1 MTR_5g094430 46.154 78 40 2 120 197 241 316 3.68e-17 81.3
MS.gene06130.t1 MTR_5g094430 45.714 70 35 3 133 201 89 156 6.83e-12 65.9
MS.gene06130.t1 MTR_7g109800 50.725 69 33 1 131 199 144 211 3.82e-17 80.1
MS.gene06130.t1 MTR_5g094430 46.154 78 40 2 120 197 219 294 4.15e-17 81.3
MS.gene06130.t1 MTR_5g094430 45.714 70 35 3 133 201 67 134 8.93e-12 65.5
MS.gene06130.t1 MTR_3g053330 35.514 107 63 1 102 202 215 321 4.18e-17 81.3
MS.gene06130.t1 MTR_5g094430 46.154 78 40 2 120 197 353 428 5.66e-17 81.3
MS.gene06130.t1 MTR_5g094430 45.714 70 35 3 133 201 201 268 9.79e-12 65.5
MS.gene06130.t1 MTR_4g007060 44.444 81 41 1 133 213 129 205 8.18e-17 79.0
MS.gene06130.t1 MTR_5g067700 33.962 159 85 5 73 223 51 197 8.65e-17 78.2
MS.gene06130.t1 MTR_7g100510 52.174 69 31 2 125 192 353 420 9.83e-17 80.1
MS.gene06130.t1 MTR_7g100510 36.641 131 68 5 133 256 190 312 1.74e-14 73.6
MS.gene06130.t1 MTR_4g007060 44.444 81 41 1 133 213 163 239 1.01e-16 79.3
MS.gene06130.t1 MTR_2g105060 38.542 96 57 1 123 216 158 253 1.04e-16 79.3
MS.gene06130.t1 MTR_2g105060 40.476 84 50 0 133 216 95 178 1.11e-16 77.8
MS.gene06130.t1 MTR_4g094412 39.785 93 54 1 102 192 202 294 1.24e-16 80.1
MS.gene06130.t1 MTR_4g094412 39.785 93 54 1 102 192 211 303 1.46e-16 79.7
MS.gene06130.t1 MTR_7g062220 41.284 109 58 3 86 189 73 180 1.56e-16 78.6
MS.gene06130.t1 MTR_2g033820 48.571 70 34 2 131 199 202 270 1.77e-16 79.3
MS.gene06130.t1 MTR_7g110720 44.444 72 40 0 131 202 215 286 2.86e-16 79.0
MS.gene06130.t1 MTR_7g110720 44.444 72 40 0 131 202 188 259 3.44e-16 78.6
MS.gene06130.t1 MTR_4g049790 40.964 83 49 0 120 202 300 382 4.13e-16 78.6
MS.gene06130.t1 MTR_4g049760 45.833 72 39 0 131 202 289 360 4.76e-16 78.6
MS.gene06130.t1 MTR_3g009470 47.436 78 39 2 120 197 484 559 5.63e-16 78.6
MS.gene06130.t1 MTR_3g009470 48.780 82 36 5 124 202 271 349 1.77e-15 77.0
MS.gene06130.t1 MTR_5g097490 45.570 79 42 1 120 198 240 317 9.93e-16 77.0
MS.gene06130.t1 MTR_2g023930 48.387 62 32 0 131 192 304 365 1.63e-15 77.0
MS.gene06130.t1 MTR_3g009470 48.780 82 36 5 124 202 271 349 1.85e-15 76.6
MS.gene06130.t1 MTR_7g079010 48.529 68 34 1 123 190 132 198 2.07e-15 73.9
MS.gene06130.t1 MTR_2g045360 42.353 85 47 1 131 213 210 294 2.80e-15 75.9
MS.gene06130.t1 MTR_7g080020 46.753 77 40 1 120 196 481 556 3.70e-15 75.9
MS.gene06130.t1 MTR_7g080020 49.296 71 32 3 133 201 281 349 5.42e-14 72.4
MS.gene06130.t1 MTR_3g104750 41.860 86 49 1 105 190 77 161 4.08e-15 72.0
MS.gene06130.t1 MTR_4g122530 48.387 62 31 1 131 192 207 267 4.48e-15 75.1
MS.gene06130.t1 MTR_7g080000 45.238 84 40 4 122 201 222 303 4.55e-15 75.9
MS.gene06130.t1 MTR_7g080000 46.053 76 39 2 120 195 421 494 7.86e-15 75.1
MS.gene06130.t1 MTR_7g071120 40.816 98 55 3 120 217 313 407 7.81e-15 74.7
MS.gene06130.t1 MTR_7g071120 36.036 111 64 4 133 241 167 272 4.27e-14 72.4
MS.gene06130.t1 MTR_7g009730 42.466 73 42 0 130 202 217 289 1.11e-14 74.3
MS.gene06130.t1 MTR_1g013760 49.123 57 29 0 133 189 141 197 1.11e-14 73.2
MS.gene06130.t1 MTR_4g132430 48.333 60 31 0 133 192 262 321 1.15e-14 74.3
MS.gene06130.t1 MTR_3g090860 44.928 69 36 1 121 187 122 190 1.16e-14 73.6
MS.gene06130.t1 MTR_4g013260 46.053 76 39 2 120 195 325 398 1.18e-14 74.3
MS.gene06130.t1 MTR_4g013260 36.283 113 68 3 133 243 185 295 1.76e-13 70.9
MS.gene06130.t1 MTR_4g132430 48.333 60 31 0 133 192 128 187 1.43e-14 73.6
MS.gene06130.t1 MTR_3g106060 39.326 89 50 1 133 217 139 227 1.48e-14 72.8
MS.gene06130.t1 MTR_1g078260 42.000 100 48 4 115 205 230 328 1.76e-14 73.6
MS.gene06130.t1 MTR_1g077780 49.206 63 31 1 131 193 61 122 2.56e-14 69.3
MS.gene06130.t1 MTR_3g031220 42.353 85 47 2 120 204 354 436 2.76e-14 73.2
MS.gene06130.t1 MTR_3g031220 47.761 67 31 3 133 197 199 263 1.61e-12 67.8
MS.gene06130.t1 MTR_8g027860 38.384 99 50 2 107 194 102 200 3.29e-14 72.4
MS.gene06130.t1 MTR_1g015140 35.135 111 67 2 85 191 51 160 4.30e-14 68.9
MS.gene06130.t1 MTR_4g047580 43.056 72 41 0 131 202 280 351 5.04e-14 72.4
MS.gene06130.t1 MTR_7g028415 50.000 60 29 1 131 190 92 150 5.33e-14 68.9
MS.gene06130.t1 MTR_7g028710 50.000 60 29 1 131 190 92 150 5.33e-14 68.9
MS.gene06130.t1 MTR_5g074400 38.144 97 59 1 105 201 393 488 6.79e-14 72.0
MS.gene06130.t1 MTR_5g074400 48.333 60 29 2 133 192 244 301 1.54e-11 65.1
MS.gene06130.t1 MTR_3g095040 48.333 60 30 1 133 192 119 177 9.68e-14 68.9
MS.gene06130.t1 MTR_7g117200 43.243 74 36 2 128 195 114 187 1.30e-13 70.5
MS.gene06130.t1 MTR_4g107970 46.032 63 34 0 130 192 176 238 1.85e-13 70.9
MS.gene06130.t1 MTR_4g107970 46.032 63 34 0 130 192 253 315 2.45e-13 70.5
MS.gene06130.t1 MTR_6g086555 42.500 80 42 3 120 196 194 272 3.57e-13 69.7
MS.gene06130.t1 MTR_7g109600 55.102 49 22 0 152 200 7 55 3.68e-13 67.4
MS.gene06130.t1 MTR_2g088000 46.667 60 32 0 133 192 350 409 4.80e-13 69.7
MS.gene06130.t1 MTR_3g093830 31.655 139 79 5 56 187 55 184 5.96e-13 68.2
MS.gene06130.t1 MTR_1g013790 41.892 74 43 0 133 206 102 175 7.94e-13 67.4
MS.gene06130.t1 MTR_8g099350 37.234 94 44 2 109 187 96 189 8.51e-13 68.2
MS.gene06130.t1 MTR_3g095080 45.588 68 35 2 122 189 135 200 1.14e-12 66.2
MS.gene06130.t1 MTR_3g095080 45.588 68 35 2 122 189 159 224 1.28e-12 66.6
MS.gene06130.t1 MTR_3g031220 47.761 67 31 3 133 197 199 263 1.46e-12 67.8
MS.gene06130.t1 MTR_8g092140 47.692 65 32 2 125 189 154 216 1.75e-12 65.9
MS.gene06130.t1 MTR_8g087000 46.296 54 29 0 152 205 35 88 2.23e-12 64.7
MS.gene06130.t1 MTR_8g096730 40.000 75 43 2 116 190 55 127 2.33e-12 63.9
MS.gene06130.t1 MTR_4g130900 44.286 70 36 2 129 196 356 424 2.86e-12 67.0
MS.gene06130.t1 MTR_8g092010 46.667 60 31 1 133 192 109 167 3.27e-12 64.3
MS.gene06130.t1 MTR_8g007270 49.153 59 29 1 131 189 153 210 7.58e-12 63.9
MS.gene06130.t1 MTR_5g067680 52.632 57 25 1 133 187 203 259 8.56e-12 65.1
MS.gene06130.t1 MTR_7g073380 49.123 57 27 1 133 187 124 180 7.35e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06130.t1 AT4G01250 53.030 132 60 1 75 204 69 200 8.62e-40 140
MS.gene06130.t1 AT4G23550 39.015 264 106 7 1 226 1 247 1.41e-38 138
MS.gene06130.t1 AT5G52830 57.018 114 48 1 111 224 145 257 2.12e-38 138
MS.gene06130.t1 AT2G34830 76.471 68 16 0 133 200 216 283 2.03e-33 127
MS.gene06130.t1 AT2G34830 76.471 68 16 0 133 200 225 292 2.16e-33 127
MS.gene06130.t1 AT1G30650 73.529 68 18 0 133 200 218 285 1.06e-31 122
MS.gene06130.t1 AT5G45050 56.842 95 41 0 106 200 1154 1248 2.17e-31 124
MS.gene06130.t1 AT5G45050 56.842 95 41 0 106 200 1126 1220 2.29e-31 124
MS.gene06130.t1 AT5G45050 56.842 95 41 0 106 200 1015 1109 2.41e-31 124
MS.gene06130.t1 AT3G58710 43.796 137 68 2 110 237 40 176 2.84e-30 115
MS.gene06130.t1 AT1G29280 67.123 73 19 1 133 205 75 142 1.69e-29 112
MS.gene06130.t1 AT3G58710 41.667 144 71 2 107 237 32 175 2.79e-29 112
MS.gene06130.t1 AT5G45260 48.515 101 49 2 106 203 1181 1281 7.01e-24 102
MS.gene06130.t1 AT2G30590 47.475 99 47 2 98 191 274 372 2.55e-23 98.6
MS.gene06130.t1 AT4G31550 46.875 96 46 2 110 201 221 315 1.40e-22 95.9
MS.gene06130.t1 AT2G24570 51.136 88 38 2 110 193 218 304 1.56e-21 92.8
MS.gene06130.t1 AT4G31550 45.263 95 47 2 111 201 221 314 2.59e-21 92.4
MS.gene06130.t1 AT5G46350 53.750 80 33 3 125 202 177 254 4.01e-21 91.7
MS.gene06130.t1 AT2G23320 46.988 83 39 2 111 189 216 297 4.21e-20 89.0
MS.gene06130.t1 AT1G29860 49.367 79 36 2 131 209 135 209 6.93e-20 87.8
MS.gene06130.t1 AT5G28650 33.333 168 94 5 29 189 163 319 7.32e-20 88.2
MS.gene06130.t1 AT3G62340 32.275 189 110 6 33 206 6 191 1.09e-19 87.0
MS.gene06130.t1 AT4G24240 49.398 83 37 2 111 189 257 338 1.59e-19 87.8
MS.gene06130.t1 AT4G18170 58.730 63 25 1 131 193 171 232 1.70e-19 87.0
MS.gene06130.t1 AT1G68150 34.746 118 75 1 96 213 201 316 6.73e-19 86.3
MS.gene06130.t1 AT2G04880 36.095 169 80 6 97 242 263 426 7.95e-19 86.7
MS.gene06130.t1 AT2G04880 46.377 69 30 3 133 201 112 173 4.93e-11 63.5
MS.gene06130.t1 AT3G04670 46.875 96 42 3 101 189 226 319 1.08e-18 85.1
MS.gene06130.t1 AT2G04880 42.202 109 51 3 97 195 239 345 1.36e-18 85.9
MS.gene06130.t1 AT2G04880 46.377 69 30 3 133 201 112 173 6.46e-11 63.2
MS.gene06130.t1 AT4G30935 35.673 171 89 8 81 248 291 443 3.40e-18 84.7
MS.gene06130.t1 AT2G37260 42.222 90 51 1 100 189 237 325 3.65e-18 84.0
MS.gene06130.t1 AT2G37260 43.662 71 38 2 123 193 76 144 6.14e-12 65.9
MS.gene06130.t1 AT2G37260 42.222 90 51 1 100 189 235 323 3.84e-18 83.6
MS.gene06130.t1 AT2G37260 43.662 71 38 2 123 193 74 142 6.50e-12 65.5
MS.gene06130.t1 AT2G37260 42.222 90 51 1 100 189 317 405 4.35e-18 84.3
MS.gene06130.t1 AT2G37260 43.662 71 38 2 123 193 156 224 5.85e-12 66.2
MS.gene06130.t1 AT2G03340 34.307 137 71 5 88 220 384 505 5.81e-18 84.0
MS.gene06130.t1 AT2G03340 29.070 172 107 4 88 255 215 375 3.74e-15 75.9
MS.gene06130.t1 AT5G49520 54.839 62 27 1 131 192 220 280 6.28e-18 83.6
MS.gene06130.t1 AT1G80840 38.793 116 59 3 113 218 117 230 1.29e-17 81.6
MS.gene06130.t1 AT2G21900 42.222 90 49 2 106 193 81 169 1.55e-17 79.3
MS.gene06130.t1 AT1G13960 50.000 70 33 2 120 189 398 465 2.20e-17 82.4
MS.gene06130.t1 AT1G13960 37.624 101 55 4 102 196 195 293 3.11e-14 73.2
MS.gene06130.t1 AT1G13960 50.000 70 33 2 120 189 245 312 3.12e-17 81.3
MS.gene06130.t1 AT1G13960 49.315 73 33 3 127 197 71 141 4.39e-14 72.0
MS.gene06130.t1 AT4G04450 45.833 72 39 0 131 202 197 268 1.58e-16 79.7
MS.gene06130.t1 AT4G04450 45.833 72 39 0 131 202 291 362 1.90e-16 79.7
MS.gene06130.t1 AT4G26640 46.154 78 40 2 120 197 194 269 3.16e-16 78.6
MS.gene06130.t1 AT4G26640 40.000 100 48 5 103 197 8 100 7.15e-13 68.6
MS.gene06130.t1 AT4G26640 46.154 78 40 2 120 197 194 269 3.16e-16 78.6
MS.gene06130.t1 AT4G26640 40.000 100 48 5 103 197 8 100 7.15e-13 68.6
MS.gene06130.t1 AT4G26640 46.154 78 40 2 120 197 194 269 3.16e-16 78.6
MS.gene06130.t1 AT4G26640 40.000 100 48 5 103 197 8 100 7.15e-13 68.6
MS.gene06130.t1 AT4G26640 46.154 78 40 2 120 197 194 269 3.16e-16 78.6
MS.gene06130.t1 AT4G26640 40.000 100 48 5 103 197 8 100 7.15e-13 68.6
MS.gene06130.t1 AT1G69310 40.000 105 59 3 88 189 100 203 3.57e-16 77.4
MS.gene06130.t1 AT1G69310 40.000 105 59 3 88 189 100 203 3.57e-16 77.4
MS.gene06130.t1 AT1G69310 40.000 105 59 3 88 189 100 203 3.57e-16 77.4
MS.gene06130.t1 AT1G62300 48.387 62 32 0 131 192 311 372 3.76e-16 79.0
MS.gene06130.t1 AT4G22070 48.387 62 32 0 131 192 296 357 4.05e-16 78.6
MS.gene06130.t1 AT4G22070 48.387 62 32 0 131 192 296 357 4.05e-16 78.6
MS.gene06130.t1 AT4G22070 48.387 62 32 0 131 192 296 357 4.05e-16 78.6
MS.gene06130.t1 AT4G22070 48.387 62 32 0 131 192 296 357 4.05e-16 78.6
MS.gene06130.t1 AT4G26640 46.154 78 40 2 120 197 298 373 4.43e-16 78.6
MS.gene06130.t1 AT4G26640 34.127 126 67 5 74 197 93 204 3.08e-13 70.1
MS.gene06130.t1 AT4G26640 46.154 78 40 2 120 197 330 405 4.54e-16 78.6
MS.gene06130.t1 AT4G26640 34.127 126 67 5 74 197 125 236 3.52e-13 70.1
MS.gene06130.t1 AT4G26640 46.154 78 40 2 120 197 370 445 4.54e-16 78.6
MS.gene06130.t1 AT4G26640 34.127 126 67 5 74 197 165 276 3.05e-13 70.1
MS.gene06130.t1 AT5G07100 43.182 88 49 1 108 195 117 203 6.15e-16 75.5
MS.gene06130.t1 AT5G07100 40.260 77 43 2 123 197 15 90 2.49e-11 62.4
MS.gene06130.t1 AT5G07100 43.182 88 49 1 108 195 117 203 6.15e-16 75.5
MS.gene06130.t1 AT5G07100 40.260 77 43 2 123 197 15 90 2.49e-11 62.4
MS.gene06130.t1 AT5G07100 43.182 88 49 1 108 195 117 203 6.15e-16 75.5
MS.gene06130.t1 AT5G07100 40.260 77 43 2 123 197 15 90 2.49e-11 62.4
MS.gene06130.t1 AT5G07100 43.182 88 49 1 108 195 117 203 6.15e-16 75.5
MS.gene06130.t1 AT5G07100 40.260 77 43 2 123 197 15 90 2.49e-11 62.4
MS.gene06130.t1 AT4G26440 40.206 97 57 1 101 197 341 436 7.81e-16 77.8
MS.gene06130.t1 AT4G26440 41.772 79 42 3 133 209 179 255 5.41e-13 69.3
MS.gene06130.t1 AT5G07100 43.182 88 49 1 108 195 210 296 7.96e-16 76.6
MS.gene06130.t1 AT5G07100 40.260 77 43 2 123 197 108 183 4.07e-11 63.2
MS.gene06130.t1 AT2G30250 48.649 74 36 2 120 193 317 388 9.63e-16 77.0
MS.gene06130.t1 AT2G47260 50.000 62 30 1 131 192 173 233 1.22e-15 76.3
MS.gene06130.t1 AT1G69810 34.746 118 68 4 87 202 164 274 1.41e-15 76.6
MS.gene06130.t1 AT1G69810 34.746 118 68 4 87 202 106 216 2.65e-15 75.5
MS.gene06130.t1 AT2G38470 38.596 114 62 4 120 231 351 458 3.28e-15 75.9
MS.gene06130.t1 AT2G38470 48.333 60 29 2 133 192 185 242 1.17e-11 65.5
MS.gene06130.t1 AT5G56270 47.368 76 38 2 120 195 476 549 3.32e-15 76.3
MS.gene06130.t1 AT5G56270 45.588 68 33 3 133 198 274 339 5.50e-12 66.6
MS.gene06130.t1 AT4G01720 49.206 63 32 0 130 192 237 299 4.86e-15 75.5
MS.gene06130.t1 AT5G41570 33.613 119 62 3 72 190 54 155 4.96e-15 72.0
MS.gene06130.t1 AT1G64000 50.794 63 30 1 128 190 110 171 6.63e-15 72.0
MS.gene06130.t1 AT5G26170 50.847 59 28 1 131 189 112 169 8.12e-15 71.2
MS.gene06130.t1 AT2G25000 46.032 63 34 0 130 192 101 163 1.17e-14 72.0
MS.gene06130.t1 AT2G25000 46.032 63 34 0 130 192 101 163 1.17e-14 72.0
MS.gene06130.t1 AT5G15130 42.466 73 42 0 130 202 225 297 1.30e-14 74.3
MS.gene06130.t1 AT5G13080 50.000 60 29 1 131 190 66 124 1.55e-14 69.7
MS.gene06130.t1 AT5G15130 42.466 73 42 0 130 202 183 255 1.58e-14 73.9
MS.gene06130.t1 AT1G18860 47.619 63 33 0 130 192 237 299 1.59e-14 73.9
MS.gene06130.t1 AT3G01080 45.333 75 39 2 118 192 331 403 1.78e-14 73.6
MS.gene06130.t1 AT3G01080 45.588 68 35 2 133 200 206 271 4.58e-13 69.3
MS.gene06130.t1 AT3G01080 45.333 75 39 2 118 192 293 365 2.00e-14 73.6
MS.gene06130.t1 AT3G01080 45.588 68 35 2 133 200 168 233 4.71e-13 69.3
MS.gene06130.t1 AT2G25000 46.032 63 34 0 130 192 123 185 2.04e-14 72.0
MS.gene06130.t1 AT2G25000 46.032 63 34 0 130 192 144 206 2.30e-14 72.0
MS.gene06130.t1 AT3G56400 33.824 136 84 3 56 187 44 177 2.39e-14 72.4
MS.gene06130.t1 AT2G46130 42.500 80 45 1 111 190 9 87 5.14e-14 67.4
MS.gene06130.t1 AT4G31800 44.444 63 35 0 130 192 174 236 5.57e-14 71.2
MS.gene06130.t1 AT4G31800 44.444 63 35 0 130 192 109 171 5.72e-14 70.5
MS.gene06130.t1 AT1G55600 37.037 81 50 1 112 192 287 366 8.91e-14 71.6
MS.gene06130.t1 AT2G46400 39.450 109 57 4 109 208 77 185 1.19e-13 70.1
MS.gene06130.t1 AT3G01970 49.123 57 28 1 133 189 66 121 3.99e-13 66.2
MS.gene06130.t1 AT3G01080 45.588 68 35 2 133 200 206 271 4.34e-13 68.9
MS.gene06130.t1 AT4G23810 41.379 87 48 2 126 209 152 238 4.98e-13 68.6
MS.gene06130.t1 AT5G43290 50.000 62 30 1 128 189 110 170 7.62e-13 67.8
MS.gene06130.t1 AT2G40740 41.176 85 45 2 133 212 174 258 1.14e-12 67.4
MS.gene06130.t1 AT2G40740 41.176 85 45 2 133 212 183 267 1.16e-12 67.4
MS.gene06130.t1 AT4G39410 47.059 68 34 2 122 189 214 279 1.67e-12 67.0
MS.gene06130.t1 AT2G44745 49.153 59 29 1 131 189 144 201 2.92e-12 65.1
MS.gene06130.t1 AT4G11070 45.312 64 33 1 126 187 103 166 3.73e-12 65.9
MS.gene06130.t1 AT4G11070 45.312 64 33 1 126 187 135 198 3.82e-12 66.2
MS.gene06130.t1 AT1G66560 50.877 57 26 1 133 187 104 160 4.17e-12 65.1
MS.gene06130.t1 AT5G24110 37.097 124 65 5 73 187 51 170 6.48e-12 65.5
MS.gene06130.t1 AT2G40750 47.368 57 28 1 133 187 153 209 1.34e-11 64.7
MS.gene06130.t1 AT5G64810 45.763 59 31 1 131 189 109 166 1.48e-11 62.8
MS.gene06130.t1 AT5G01900 52.632 57 25 1 133 187 111 167 2.18e-11 63.2
MS.gene06130.t1 AT1G66550 48.387 62 28 2 130 187 99 160 3.77e-11 62.4
MS.gene06130.t1 AT1G66550 48.387 62 28 2 130 187 104 165 3.86e-11 62.4
MS.gene06130.t1 AT4G12020 39.080 87 46 3 127 208 463 547 4.17e-11 63.9
MS.gene06130.t1 AT4G12020 39.080 87 46 3 127 208 463 547 4.17e-11 63.9
MS.gene06130.t1 AT4G12020 39.080 87 46 3 127 208 463 547 4.51e-11 63.9
MS.gene06130.t1 AT4G12020 39.080 87 46 3 127 208 463 547 4.57e-11 63.9
MS.gene06130.t1 AT4G12020 39.080 87 46 3 127 208 463 547 4.64e-11 63.9
MS.gene06130.t1 AT4G12020 39.080 87 46 3 127 208 463 547 4.79e-11 63.9
MS.gene06130.t1 AT4G12020 39.080 87 46 3 127 208 463 547 4.79e-11 63.9
MS.gene06130.t1 AT4G12020 39.080 87 46 3 127 208 463 547 4.90e-11 63.9
MS.gene06130.t1 AT4G12020 35.135 111 60 4 127 232 463 566 4.90e-11 63.9
MS.gene06130.t1 AT4G12020 39.080 87 46 3 127 208 396 480 5.25e-11 63.9
MS.gene06130.t1 AT1G69310 36.190 105 59 4 88 189 100 199 6.01e-11 62.4
MS.gene06130.t1 AT4G12020 35.135 111 60 4 127 232 463 566 6.21e-11 63.5

Find 47 sgRNAs with CRISPR-Local

Find 68 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCATGATGAGTTATTATT+TGG 0.129039 4.2:+5628018 MS.gene06130:CDS
TTGACTTGTTCAGGCTCTTT+AGG 0.150517 4.2:-5628160 None:intergenic
TTTGGATCCAAAAGTTTATT+TGG 0.173451 4.2:+5628736 MS.gene06130:CDS
GGATGAGCTTGCATTCTTAA+TGG 0.203867 4.2:+5627925 MS.gene06130:CDS
TAGATATATGGCTGCAGTTT+TGG 0.232281 4.2:+5629056 MS.gene06130:CDS
AAGTATGAAGCAACAAAATA+AGG 0.250850 4.2:+5628898 MS.gene06130:CDS
GATGAAAGTGGATAGAAATT+AGG 0.255054 4.2:-5628105 None:intergenic
TTAATTTCTTTGACTTGTTC+AGG 0.260130 4.2:-5628169 None:intergenic
GGATAAGGTGAACCCTTTAT+TGG 0.261455 4.2:-5628647 None:intergenic
TGACTTGTTCAGGCTCTTTA+GGG 0.272887 4.2:-5628159 None:intergenic
GCGAGAGAGCTTGTATAAAA+TGG 0.275205 4.2:-5628133 None:intergenic
GCTCTTCAAATTCATGAATA+AGG 0.283800 4.2:-5628074 None:intergenic
GCATGGGCATGGCGTAAATA+TGG 0.330729 4.2:+5628617 MS.gene06130:CDS
TATGTAACCAAATAAACTTT+TGG 0.350399 4.2:-5628743 None:intergenic
AAAGAGCTAGAGGAACTTAT+TGG 0.359530 4.2:+5628998 MS.gene06130:CDS
TGCAGAGATATATAGATATA+TGG 0.361327 4.2:+5629044 MS.gene06130:CDS
ATTCTTAATGGATTGGGATT+TGG 0.363394 4.2:+5627937 MS.gene06130:CDS
AGTATGAAGCAACAAAATAA+GGG 0.388973 4.2:+5628899 MS.gene06130:CDS
ACAAGTGGAAAAGAATCATT+TGG 0.397015 4.2:+5628718 MS.gene06130:CDS
CTATAGTAGCTTCGTGGATA+AGG 0.400452 4.2:-5628662 None:intergenic
GCTTGCATTCTTAATGGATT+GGG 0.410458 4.2:+5627931 MS.gene06130:CDS
AGCTTGCATTCTTAATGGAT+TGG 0.412282 4.2:+5627930 MS.gene06130:CDS
CTCAATTATGTGATGATGGT+TGG 0.450519 4.2:+5628966 MS.gene06130:CDS
AGTTCCTCTAGCTCTTTGCT+TGG 0.460231 4.2:-5628992 None:intergenic
GCTAATGAATTTCTTCGAGT+TGG 0.462513 4.2:-5628791 None:intergenic
ACTCGAAGAAATTCATTAGC+TGG 0.478608 4.2:+5628794 MS.gene06130:CDS
GAATTTCTTCGAGTTGGTTG+AGG 0.496581 4.2:-5628785 None:intergenic
TAGCAGTTCTAAAGGATGTT+CGG 0.497075 4.2:+5628688 MS.gene06130:CDS
TATAGATGTAGCAGTTCTAA+AGG 0.522420 4.2:+5628680 MS.gene06130:CDS
CTACATCTATAGTAGCTTCG+TGG 0.523670 4.2:-5628668 None:intergenic
TTTAGTGAAAATTGAAGATG+AGG 0.535441 4.2:+5628865 MS.gene06130:CDS
CCAAGGTCTTCTTGAGTGGT+TGG 0.535505 4.2:+5628937 MS.gene06130:CDS
GGTCTTCTTGAGTGGTTGGA+TGG 0.539042 4.2:+5628941 MS.gene06130:CDS
CTCTATGTGATGCATGGGCA+TGG 0.552413 4.2:+5628606 MS.gene06130:CDS
GGTGCTCAATTATGTGATGA+TGG 0.555369 4.2:+5628962 MS.gene06130:CDS
AAAATGGTTTGAGATGAAAG+TGG 0.570433 4.2:-5628117 None:intergenic
ATTCATTAGCTGGAAGCACT+AGG 0.572420 4.2:+5628804 MS.gene06130:CDS
ATGGTACTCTATGTGATGCA+TGG 0.587497 4.2:+5628600 MS.gene06130:CDS
ATGACCAAGGTCTTCTTGAG+TGG 0.592565 4.2:+5628933 MS.gene06130:CDS
TGGTACTCTATGTGATGCAT+GGG 0.594523 4.2:+5628601 MS.gene06130:CDS
GATTCCAAGCAAAGAGCTAG+AGG 0.602142 4.2:+5628988 MS.gene06130:CDS
CCAACCACTCAAGAAGACCT+TGG 0.617141 4.2:-5628937 None:intergenic
AAGAAAGTAACAGCAGTGGA+TGG 0.637681 4.2:+5628581 MS.gene06130:CDS
ATGTTCGGCGAAGAAACAAG+TGG 0.637909 4.2:+5628703 MS.gene06130:CDS
GTATGAAGCAACAAAATAAG+GGG 0.642510 4.2:+5628900 MS.gene06130:CDS
GGGTTTGAGAAAGATGACCA+AGG 0.744113 4.2:+5628920 MS.gene06130:CDS
TGTGAAGAAAGTAACAGCAG+TGG 0.752611 4.2:+5628577 MS.gene06130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATAAAAATAAAAAAAT+TGG - chr4.2:5628345-5628364 None:intergenic 0.0%
!! AAAAAAGATGAGAAAAATAA+GGG - chr4.2:5627990-5628009 None:intergenic 15.0%
!! AGAAAAGATTATATTACTAT+AGG - chr4.2:5628396-5628415 None:intergenic 15.0%
!!! TTGTTTCAAATTTATTTTTG+AGG + chr4.2:5628423-5628442 MS.gene06130:intron 15.0%
!! CAGTATCTAAGTTTAAAAAA+AGG + chr4.2:5628236-5628255 MS.gene06130:CDS 20.0%
!! GAAAAAAGATGAGAAAAATA+AGG - chr4.2:5627991-5628010 None:intergenic 20.0%
!!! AATTGTCTTTGTATTTTGTT+TGG + chr4.2:5628364-5628383 MS.gene06130:intron 20.0%
!!! AGATTAAGATTTTTATGTTG+TGG + chr4.2:5628318-5628337 MS.gene06130:intron 20.0%
!!! TATGTAACCAAATAAACTTT+TGG - chr4.2:5628746-5628765 None:intergenic 20.0%
! AAGTATGAAGCAACAAAATA+AGG + chr4.2:5628898-5628917 MS.gene06130:CDS 25.0%
! AGTATGAAGCAACAAAATAA+GGG + chr4.2:5628899-5628918 MS.gene06130:CDS 25.0%
! ATATGGACAAAAACCAATAA+AGG + chr4.2:5628634-5628653 MS.gene06130:CDS 25.0%
! CGTTATAATCATTTGCATAT+TGG + chr4.2:5628271-5628290 MS.gene06130:intron 25.0%
! GATCATGATGAGTTATTATT+TGG + chr4.2:5628018-5628037 MS.gene06130:CDS 25.0%
! TATGGACAAAAACCAATAAA+GGG + chr4.2:5628635-5628654 MS.gene06130:CDS 25.0%
! TGCAGAGATATATAGATATA+TGG + chr4.2:5629044-5629063 MS.gene06130:CDS 25.0%
! TTTAGTGAAAATTGAAGATG+AGG + chr4.2:5628865-5628884 MS.gene06130:CDS 25.0%
! TTTGGATCCAAAAGTTTATT+TGG + chr4.2:5628736-5628755 MS.gene06130:CDS 25.0%
!! CGGATATAGAATTTTCTATT+TGG + chr4.2:5628490-5628509 MS.gene06130:intron 25.0%
!! TCATCTTCAATTTTCACTAA+AGG - chr4.2:5628866-5628885 None:intergenic 25.0%
!! TTTTTAAACTTAGATACTGC+TGG - chr4.2:5628235-5628254 None:intergenic 25.0%
!!! TTAATTTCTTTGACTTGTTC+AGG - chr4.2:5628172-5628191 None:intergenic 25.0%
!!! TTAGTAGTTTTTGAGAATTC+TGG - chr4.2:5628051-5628070 None:intergenic 25.0%
!!! TTATTTTTGAGGAAACCTAA+TGG + chr4.2:5628434-5628453 MS.gene06130:intron 25.0%
ACAAGTGGAAAAGAATCATT+TGG + chr4.2:5628718-5628737 MS.gene06130:CDS 30.0%
AGAAAAATAAGGGTTGTTGT+TGG - chr4.2:5627980-5627999 None:intergenic 30.0%
AGAAAATTCTATATCCGCTT+AGG - chr4.2:5628487-5628506 None:intergenic 30.0%
GAAAATTCTATATCCGCTTA+GGG - chr4.2:5628486-5628505 None:intergenic 30.0%
GATGAAAGTGGATAGAAATT+AGG - chr4.2:5628108-5628127 None:intergenic 30.0%
GCTCTTCAAATTCATGAATA+AGG - chr4.2:5628077-5628096 None:intergenic 30.0%
GTATGAAGCAACAAAATAAG+GGG + chr4.2:5628900-5628919 MS.gene06130:CDS 30.0%
! AAAATGGTTTGAGATGAAAG+TGG - chr4.2:5628120-5628139 None:intergenic 30.0%
! AAGCTTTAATTAACCCTAAG+CGG + chr4.2:5628470-5628489 MS.gene06130:intron 30.0%
! TATAGATGTAGCAGTTCTAA+AGG + chr4.2:5628680-5628699 MS.gene06130:CDS 30.0%
!! ATTCTTAATGGATTGGGATT+TGG + chr4.2:5627937-5627956 MS.gene06130:CDS 30.0%
AAAGAGCTAGAGGAACTTAT+TGG + chr4.2:5628998-5629017 MS.gene06130:CDS 35.0%
ACTCGAAGAAATTCATTAGC+TGG + chr4.2:5628794-5628813 MS.gene06130:CDS 35.0%
GCTAATGAATTTCTTCGAGT+TGG - chr4.2:5628794-5628813 None:intergenic 35.0%
TTGACTTACACTTGTCCATT+AGG - chr4.2:5628452-5628471 None:intergenic 35.0%
! AGCTTGCATTCTTAATGGAT+TGG + chr4.2:5627930-5627949 MS.gene06130:CDS 35.0%
! TAGATATATGGCTGCAGTTT+TGG + chr4.2:5629056-5629075 MS.gene06130:CDS 35.0%
!! CTCAATTATGTGATGATGGT+TGG + chr4.2:5628966-5628985 MS.gene06130:CDS 35.0%
!! GCTTGCATTCTTAATGGATT+GGG + chr4.2:5627931-5627950 MS.gene06130:CDS 35.0%
!! TAGCAGTTCTAAAGGATGTT+CGG + chr4.2:5628688-5628707 MS.gene06130:CDS 35.0%
AAGAAAGTAACAGCAGTGGA+TGG + chr4.2:5628581-5628600 MS.gene06130:CDS 40.0%
ATGGTACTCTATGTGATGCA+TGG + chr4.2:5628600-5628619 MS.gene06130:CDS 40.0%
CTACATCTATAGTAGCTTCG+TGG - chr4.2:5628671-5628690 None:intergenic 40.0%
CTATAGTAGCTTCGTGGATA+AGG - chr4.2:5628665-5628684 None:intergenic 40.0%
GCGAGAGAGCTTGTATAAAA+TGG - chr4.2:5628136-5628155 None:intergenic 40.0%
GGATAAGGTGAACCCTTTAT+TGG - chr4.2:5628650-5628669 None:intergenic 40.0%
GGATGAGCTTGCATTCTTAA+TGG + chr4.2:5627925-5627944 MS.gene06130:CDS 40.0%
GGTGCTCAATTATGTGATGA+TGG + chr4.2:5628962-5628981 MS.gene06130:CDS 40.0%
TGGTACTCTATGTGATGCAT+GGG + chr4.2:5628601-5628620 MS.gene06130:CDS 40.0%
TGTGAAGAAAGTAACAGCAG+TGG + chr4.2:5628577-5628596 MS.gene06130:CDS 40.0%
!! ATTCATTAGCTGGAAGCACT+AGG + chr4.2:5628804-5628823 MS.gene06130:CDS 40.0%
!! GAATTTCTTCGAGTTGGTTG+AGG - chr4.2:5628788-5628807 None:intergenic 40.0%
!! TGACTTGTTCAGGCTCTTTA+GGG - chr4.2:5628162-5628181 None:intergenic 40.0%
!! TTGACTTGTTCAGGCTCTTT+AGG - chr4.2:5628163-5628182 None:intergenic 40.0%
ATGACCAAGGTCTTCTTGAG+TGG + chr4.2:5628933-5628952 MS.gene06130:CDS 45.0%
ATGTTCGGCGAAGAAACAAG+TGG + chr4.2:5628703-5628722 MS.gene06130:CDS 45.0%
GATTCCAAGCAAAGAGCTAG+AGG + chr4.2:5628988-5629007 MS.gene06130:CDS 45.0%
GGGTTTGAGAAAGATGACCA+AGG + chr4.2:5628920-5628939 MS.gene06130:CDS 45.0%
!! AGTTCCTCTAGCTCTTTGCT+TGG - chr4.2:5628995-5629014 None:intergenic 45.0%
CCAACCACTCAAGAAGACCT+TGG - chr4.2:5628940-5628959 None:intergenic 50.0%
CCAAGGTCTTCTTGAGTGGT+TGG + chr4.2:5628937-5628956 MS.gene06130:CDS 50.0%
CTCTATGTGATGCATGGGCA+TGG + chr4.2:5628606-5628625 MS.gene06130:CDS 50.0%
GCATGGGCATGGCGTAAATA+TGG + chr4.2:5628617-5628636 MS.gene06130:CDS 50.0%
GGTCTTCTTGAGTGGTTGGA+TGG + chr4.2:5628941-5628960 MS.gene06130:CDS 50.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 5627923 5629093 5627923 ID=MS.gene06130
chr4.2 mRNA 5627923 5629093 5627923 ID=MS.gene06130.t1;Parent=MS.gene06130
chr4.2 exon 5627923 5628257 5627923 ID=MS.gene06130.t1.exon1;Parent=MS.gene06130.t1
chr4.2 CDS 5627923 5628257 5627923 ID=cds.MS.gene06130.t1;Parent=MS.gene06130.t1
chr4.2 exon 5628553 5629093 5628553 ID=MS.gene06130.t1.exon2;Parent=MS.gene06130.t1
chr4.2 CDS 5628553 5629093 5628553 ID=cds.MS.gene06130.t1;Parent=MS.gene06130.t1
Gene Sequence

>MS.gene06130

ATGGATGAGCTTGCATTCTTAATGGATTGGGATTTGGAAGCTATCAATGAAGTACCAACAACAACCCTTATTTTTCTCATCTTTTTTCTGAACAAGATCATGATGAGTTATTATTTGGATGTTTTCCAGAATTCTCAAAAACTACTAATGTCCTTATTCATGAATTTGAAGAGCTTTGCAAACCTAATTTCTATCCACTTTCATCTCAAACCATTTTATACAAGCTCTCTCGCTATCCCTAAAGAGCCTGAACAAGTCAAAGAAATTAAAGCAGCAGACAAAGTAGCTTCTCATCAAGATCTGCAAGTTCCAGCAGTATCTAAGTTTAAAAAAAGGTATAAATACGATCGTTATAATCATTTGCATATTGGTCTAGTTAGAATTTAGAAATAATTAGATTAAGATTTTTATGTTGTGGTCCAATTTTTTTATTTTTATTTTAATTGTCTTTGTATTTTGTTTGGAGTGCACCTATAGTAATATAATCTTTTCTTTATACTTTGTTTCAAATTTATTTTTGAGGAAACCTAATGGACAAGTGTAAGTCAAGCTTTAATTAACCCTAAGCGGATATAGAATTTTCTATTTGGTGTAAATACTAAAAGTGAATATATATGTTTGTTTTTTCAGCAAGAAAAACAAGAACAAGAGTGTTGTGAAGAAAGTAACAGCAGTGGATGGTACTCTATGTGATGCATGGGCATGGCGTAAATATGGACAAAAACCAATAAAGGGTTCACCTTATCCACGAAGCTACTATAGATGTAGCAGTTCTAAAGGATGTTCGGCGAAGAAACAAGTGGAAAAGAATCATTTGGATCCAAAAGTTTATTTGGTTACATACACTGCAGAACACAATCATCCTCAACCAACTCGAAGAAATTCATTAGCTGGAAGCACTAGGAAGAACAATATCTTAGTTACACATTCTTCAAAGACACCTTTAGTGAAAATTGAAGATGAGGTAAATGTGACAAGTATGAAGCAACAAAATAAGGGGTTTGAGAAAGATGACCAAGGTCTTCTTGAGTGGTTGGATGGTGCTCAATTATGTGATGATGGTTGGATTCCAAGCAAAGAGCTAGAGGAACTTATTGGACTTGAGATAAGTGTCAATAACATGCAGAGATATATAGATATATGGCTGCAGTTTTGGATTAAGAGAAAATGA
Protein sequence

>MS.gene06130.t1

MDELAFLMDWDLEAINEVPTTTLIFLIFFLNKIMMSYYLDVFQNSQKLLMSLFMNLKSFANLISIHFHLKPFYTSSLAIPKEPEQVKEIKAADKVASHQDLQVPAVSKFKKSKKNKNKSVVKKVTAVDGTLCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCSAKKQVEKNHLDPKVYLVTYTAEHNHPQPTRRNSLAGSTRKNNILVTHSSKTPLVKIEDEVNVTSMKQQNKGFEKDDQGLLEWLDGAQLCDDGWIPSKELEELIGLEISVNNMQRYIDIWLQFWIKRK