Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049181.t1 | XP_003602727.1 | 90.7 | 108 | 1 | 2 | 1 | 108 | 1 | 99 | 1.10E-44 | 189.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049181.t1 | B7FGG5 | 90.7 | 108 | 1 | 2 | 1 | 108 | 1 | 99 | 7.6e-45 | 189.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049181 | MS.gene049182 | 0.835851 | 1.32E-56 | -1.69E-46 |
| MS.gene049181 | MS.gene049281 | 0.823238 | 1.54E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene049312 | 0.80094 | 1.14E-48 | -1.69E-46 |
| MS.gene049181 | MS.gene050504 | -0.813484 | 2.50E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene050518 | -0.808064 | 3.72E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene050612 | -0.80093 | 1.14E-48 | -1.69E-46 |
| MS.gene049181 | MS.gene050883 | 0.820434 | 6.87E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene051959 | 0.836648 | 8.27E-57 | -1.69E-46 |
| MS.gene049181 | MS.gene051960 | 0.844063 | 9.53E-59 | -1.69E-46 |
| MS.gene049181 | MS.gene052053 | 0.803446 | 3.47E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene052091 | 0.825712 | 4.04E-54 | -1.69E-46 |
| MS.gene049181 | MS.gene053932 | 0.827016 | 1.97E-54 | -1.69E-46 |
| MS.gene049181 | MS.gene054056 | 0.846 | 2.86E-59 | -1.69E-46 |
| MS.gene049181 | MS.gene054954 | -0.804048 | 2.60E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene055549 | 0.836386 | 9.65E-57 | -1.69E-46 |
| MS.gene049181 | MS.gene055550 | 0.831788 | 1.37E-55 | -1.69E-46 |
| MS.gene049181 | MS.gene055551 | 0.806214 | 9.17E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene055776 | -0.802423 | 5.65E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene056311 | 0.831617 | 1.51E-55 | -1.69E-46 |
| MS.gene049181 | MS.gene056504 | -0.802873 | 4.56E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene056530 | 0.860939 | 1.46E-63 | -1.69E-46 |
| MS.gene049181 | MS.gene056761 | 0.827449 | 1.55E-54 | -1.69E-46 |
| MS.gene049181 | MS.gene057001 | 0.833909 | 4.07E-56 | -1.69E-46 |
| MS.gene049181 | MS.gene057148 | -0.814776 | 1.30E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene058493 | 0.800004 | 1.77E-48 | -1.69E-46 |
| MS.gene049181 | MS.gene058628 | 0.82482 | 6.56E-54 | -1.69E-46 |
| MS.gene049181 | MS.gene058629 | 0.82333 | 1.47E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene058630 | 0.814081 | 1.85E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene05884 | 0.810314 | 1.23E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene059022 | -0.811962 | 5.39E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene059865 | -0.802304 | 5.98E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene060337 | 0.805757 | 1.14E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene060595 | 0.811023 | 8.61E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene060703 | -0.81425 | 1.70E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene06077 | -0.809763 | 1.61E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene06130 | 0.802455 | 5.57E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene062923 | -0.809031 | 2.31E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene062925 | -0.815948 | 7.12E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene06298 | 0.882656 | 8.68E-71 | -1.69E-46 |
| MS.gene049181 | MS.gene06299 | 0.80602 | 1.01E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene063124 | 0.815036 | 1.14E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene063125 | 0.849842 | 2.49E-60 | -1.69E-46 |
| MS.gene049181 | MS.gene063782 | 0.822276 | 2.58E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene064019 | 0.828166 | 1.05E-54 | -1.69E-46 |
| MS.gene049181 | MS.gene064275 | 0.819348 | 1.22E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene06439 | 0.814945 | 1.19E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene064971 | -0.805502 | 1.29E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene065073 | 0.809351 | 1.98E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene065089 | 0.803006 | 4.28E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene065323 | -0.801052 | 1.08E-48 | -1.69E-46 |
| MS.gene049181 | MS.gene065509 | 0.827452 | 1.55E-54 | -1.69E-46 |
| MS.gene049181 | MS.gene067091 | 0.82187 | 3.21E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene067363 | 0.800761 | 1.24E-48 | -1.69E-46 |
| MS.gene049181 | MS.gene067785 | 0.842866 | 1.99E-58 | -1.69E-46 |
| MS.gene049181 | MS.gene069219 | 0.808795 | 2.60E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene070025 | 0.802303 | 5.98E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene071172 | 0.808898 | 2.47E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene071810 | 0.812464 | 4.18E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene071900 | -0.805816 | 1.11E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene071901 | -0.834203 | 3.43E-56 | -1.69E-46 |
| MS.gene049181 | MS.gene072476 | 0.821161 | 4.68E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene072871 | -0.809102 | 2.23E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene072875 | -0.820218 | 7.70E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene07348 | -0.811344 | 7.34E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene073565 | -0.840567 | 8.04E-58 | -1.69E-46 |
| MS.gene049181 | MS.gene073608 | -0.842904 | 1.95E-58 | -1.69E-46 |
| MS.gene049181 | MS.gene07361 | 0.847692 | 9.84E-60 | -1.69E-46 |
| MS.gene049181 | MS.gene07362 | 0.847296 | 1.26E-59 | -1.69E-46 |
| MS.gene049181 | MS.gene074124 | 0.827044 | 1.94E-54 | -1.69E-46 |
| MS.gene049181 | MS.gene09926 | 0.802073 | 6.67E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene09927 | 0.800231 | 1.59E-48 | -1.69E-46 |
| MS.gene049181 | MS.gene20344 | 0.83528 | 1.84E-56 | -1.69E-46 |
| MS.gene049181 | MS.gene20483 | 0.813145 | 2.97E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene20905 | 0.846991 | 1.53E-59 | -1.69E-46 |
| MS.gene049181 | MS.gene21237 | 0.848708 | 5.16E-60 | -1.69E-46 |
| MS.gene049181 | MS.gene21845 | -0.816395 | 5.65E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene22569 | -0.80523 | 1.48E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene22667 | -0.802498 | 5.45E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene22670 | -0.81044 | 1.15E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene22726 | -0.81271 | 3.70E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene22826 | -0.814062 | 1.86E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene23018 | -0.824287 | 8.76E-54 | -1.69E-46 |
| MS.gene049181 | MS.gene23352 | -0.824721 | 6.93E-54 | -1.69E-46 |
| MS.gene049181 | MS.gene24025 | -0.80948 | 1.85E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene24099 | 0.848013 | 8.03E-60 | -1.69E-46 |
| MS.gene049181 | MS.gene24408 | 0.817666 | 2.93E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene24491 | 0.843205 | 1.62E-58 | -1.69E-46 |
| MS.gene049181 | MS.gene24767 | -0.801625 | 8.24E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene24883 | 0.812191 | 4.80E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene25666 | -0.831131 | 1.99E-55 | -1.69E-46 |
| MS.gene049181 | MS.gene25675 | -0.818493 | 1.90E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene25677 | -0.817975 | 2.49E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene26384 | -0.817135 | 3.86E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene26385 | -0.8203 | 7.38E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene26662 | -0.821373 | 4.18E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene27099 | 0.859369 | 4.34E-63 | -1.69E-46 |
| MS.gene049181 | MS.gene29342 | 0.812414 | 4.29E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene29481 | 0.827007 | 1.98E-54 | -1.69E-46 |
| MS.gene049181 | MS.gene30995 | 0.813588 | 2.37E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene31130 | 0.823478 | 1.36E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene31552 | -0.806092 | 9.73E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene31764 | 0.820239 | 7.62E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene32026 | -0.819936 | 8.94E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene32567 | 0.831458 | 1.65E-55 | -1.69E-46 |
| MS.gene049181 | MS.gene32652 | -0.821833 | 3.27E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene33500 | -0.815624 | 8.40E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene33668 | 0.832924 | 7.16E-56 | -1.69E-46 |
| MS.gene049181 | MS.gene34212 | -0.808723 | 2.69E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene34412 | 0.814838 | 1.26E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene34636 | 0.825032 | 5.85E-54 | -1.69E-46 |
| MS.gene049181 | MS.gene35131 | 0.801062 | 1.07E-48 | -1.69E-46 |
| MS.gene049181 | MS.gene36144 | 0.813368 | 2.65E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene36464 | 0.830688 | 2.55E-55 | -1.69E-46 |
| MS.gene049181 | MS.gene36749 | 0.81 | 1.43E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene36830 | 0.811088 | 8.34E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene38046 | -0.822517 | 2.27E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene38214 | -0.815292 | 9.96E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene38328 | -0.814347 | 1.61E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene39054 | 0.801028 | 1.09E-48 | -1.69E-46 |
| MS.gene049181 | MS.gene39380 | 0.838261 | 3.20E-57 | -1.69E-46 |
| MS.gene049181 | MS.gene39520 | -0.815757 | 7.85E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene40247 | 0.817603 | 3.03E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene40619 | 0.831096 | 2.03E-55 | -1.69E-46 |
| MS.gene049181 | MS.gene40620 | 0.82981 | 4.18E-55 | -1.69E-46 |
| MS.gene049181 | MS.gene40699 | 0.832773 | 7.81E-56 | -1.69E-46 |
| MS.gene049181 | MS.gene41459 | 0.806403 | 8.37E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene41626 | 0.843623 | 1.25E-58 | -1.69E-46 |
| MS.gene049181 | MS.gene41627 | 0.859633 | 3.61E-63 | -1.69E-46 |
| MS.gene049181 | MS.gene41633 | -0.808831 | 2.55E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene41704 | 0.837582 | 4.78E-57 | -1.69E-46 |
| MS.gene049181 | MS.gene42342 | -0.812088 | 5.05E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene42631 | -0.810133 | 1.34E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene44723 | 0.800843 | 1.19E-48 | -1.69E-46 |
| MS.gene049181 | MS.gene46055 | 0.806984 | 6.31E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene47049 | 0.884487 | 1.84E-71 | -1.69E-46 |
| MS.gene049181 | MS.gene47475 | -0.808428 | 3.11E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene47889 | -0.807607 | 4.65E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene50174 | 0.831211 | 1.90E-55 | -1.69E-46 |
| MS.gene049181 | MS.gene50709 | -0.815033 | 1.14E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene51514 | 0.80535 | 1.39E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene51539 | 0.801343 | 9.41E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene51894 | 0.839727 | 1.33E-57 | -1.69E-46 |
| MS.gene049181 | MS.gene51927 | -0.803974 | 2.70E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene51935 | 0.839117 | 1.92E-57 | -1.69E-46 |
| MS.gene049181 | MS.gene52062 | 0.821009 | 5.07E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene52287 | -0.800559 | 1.36E-48 | -1.69E-46 |
| MS.gene049181 | MS.gene52593 | -0.80183 | 7.48E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene53614 | -0.812716 | 3.69E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene54709 | -0.803365 | 3.61E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene54882 | 0.802668 | 5.03E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene54923 | 0.809793 | 1.59E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene56769 | 0.805816 | 1.11E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene58022 | 0.817392 | 3.38E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene58183 | 0.807217 | 5.63E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene58945 | 0.831046 | 2.08E-55 | -1.69E-46 |
| MS.gene049181 | MS.gene59409 | 0.810557 | 1.09E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene60360 | -0.803462 | 3.45E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene60721 | 0.807335 | 5.32E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene60722 | 0.802357 | 5.83E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene61153 | 0.801688 | 8.00E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene63367 | 0.845905 | 3.03E-59 | -1.69E-46 |
| MS.gene049181 | MS.gene63691 | 0.803873 | 2.83E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene63905 | 0.804223 | 2.39E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene64700 | 0.861216 | 1.20E-63 | -1.69E-46 |
| MS.gene049181 | MS.gene65672 | 0.81738 | 3.40E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene65990 | -0.805649 | 1.21E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene66360 | 0.836228 | 1.06E-56 | -1.69E-46 |
| MS.gene049181 | MS.gene67131 | 0.822038 | 2.93E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene67232 | -0.811188 | 7.93E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene67682 | 0.805191 | 1.50E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene67744 | 0.842526 | 2.45E-58 | -1.69E-46 |
| MS.gene049181 | MS.gene68126 | -0.808422 | 3.12E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene68181 | 0.809166 | 2.16E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene68631 | 0.819944 | 8.90E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene69071 | 0.826357 | 2.84E-54 | -1.69E-46 |
| MS.gene049181 | MS.gene69210 | 0.821644 | 3.62E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene69734 | -0.835447 | 1.67E-56 | -1.69E-46 |
| MS.gene049181 | MS.gene72999 | -0.819636 | 1.05E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene73393 | 0.831176 | 1.94E-55 | -1.69E-46 |
| MS.gene049181 | MS.gene73644 | 0.833479 | 5.21E-56 | -1.69E-46 |
| MS.gene049181 | MS.gene73753 | 0.808003 | 3.83E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene74502 | 0.846692 | 1.85E-59 | -1.69E-46 |
| MS.gene049181 | MS.gene75048 | 0.84447 | 7.41E-59 | -1.69E-46 |
| MS.gene049181 | MS.gene75508 | 0.833214 | 6.06E-56 | -1.69E-46 |
| MS.gene049181 | MS.gene75517 | 0.825543 | 4.43E-54 | -1.69E-46 |
| MS.gene049181 | MS.gene76159 | 0.838917 | 2.16E-57 | -1.69E-46 |
| MS.gene049181 | MS.gene76722 | 0.816762 | 4.68E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene77183 | 0.823234 | 1.55E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene78419 | 0.80919 | 2.14E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene78593 | 0.820075 | 8.31E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene79094 | 0.834105 | 3.63E-56 | -1.69E-46 |
| MS.gene049181 | MS.gene79201 | 0.830888 | 2.28E-55 | -1.69E-46 |
| MS.gene049181 | MS.gene80055 | 0.804856 | 1.77E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene80056 | 0.82227 | 2.59E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene80167 | 0.809576 | 1.77E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene80234 | -0.808463 | 3.06E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene80239 | -0.815573 | 8.63E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene80612 | 0.815812 | 7.63E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene81108 | 0.836047 | 1.18E-56 | -1.69E-46 |
| MS.gene049181 | MS.gene81230 | -0.819324 | 1.23E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene81359 | 0.830735 | 2.48E-55 | -1.69E-46 |
| MS.gene049181 | MS.gene82958 | 0.809513 | 1.82E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene84704 | 0.828861 | 7.10E-55 | -1.69E-46 |
| MS.gene049181 | MS.gene84712 | 0.823997 | 1.02E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene85232 | 0.829138 | 6.09E-55 | -1.69E-46 |
| MS.gene049181 | MS.gene86145 | 0.814037 | 1.89E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene87674 | 0.804241 | 2.37E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene88463 | 0.818874 | 1.56E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene88888 | 0.81482 | 1.27E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene88946 | 0.801331 | 9.47E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene88977 | 0.847632 | 1.02E-59 | -1.69E-46 |
| MS.gene049181 | MS.gene89091 | -0.801979 | 6.97E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene89246 | 0.813496 | 2.49E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene89256 | 0.808592 | 2.87E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene89501 | 0.804878 | 1.75E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene90796 | -0.802261 | 6.10E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene91775 | 0.803677 | 3.11E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene92589 | 0.80706 | 6.08E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene92774 | 0.810067 | 1.39E-50 | -1.69E-46 |
| MS.gene049181 | MS.gene93362 | -0.801826 | 7.50E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene94266 | 0.804034 | 2.62E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene94987 | -0.814818 | 1.27E-51 | -1.69E-46 |
| MS.gene049181 | MS.gene95714 | 0.839993 | 1.14E-57 | -1.69E-46 |
| MS.gene049181 | MS.gene95833 | 0.840985 | 6.25E-58 | -1.69E-46 |
| MS.gene049181 | MS.gene96309 | -0.832605 | 8.59E-56 | -1.69E-46 |
| MS.gene049181 | MS.gene96524 | -0.803061 | 4.17E-49 | -1.69E-46 |
| MS.gene049181 | MS.gene98636 | 0.821657 | 3.59E-53 | -1.69E-46 |
| MS.gene049181 | MS.gene98637 | 0.819446 | 1.16E-52 | -1.69E-46 |
| MS.gene049181 | MS.gene99191 | 0.815485 | 9.03E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049181.t1 | MTR_3g098390 | 90.741 | 108 | 1 | 2 | 1 | 108 | 1 | 99 | 3.74e-66 | 194 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049181.t1 | AT2G44010 | 35.345 | 116 | 50 | 5 | 1 | 107 | 1 | 100 | 4.39e-12 | 57.8 |
Find 16 sgRNAs with CRISPR-Local
Find 20 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTATGAGGTTATTTCTTT+AGG | 0.254934 | 3.3:-80936502 | MS.gene049181:CDS |
| AAATCTGTTGGAGATAGTTT+TGG | 0.346900 | 3.3:-80936370 | MS.gene049181:CDS |
| GCTTCAGATAATTACAATAT+TGG | 0.370686 | 3.3:-80936406 | MS.gene049181:CDS |
| TTTCATGATCAGACAACAAC+TGG | 0.416618 | 3.3:-80936334 | MS.gene049181:CDS |
| TAGAACAAGACGACAGTATG+AGG | 0.483439 | 3.3:-80936515 | MS.gene049181:CDS |
| TGAAGTGGTTGTTGAGTTTG+AGG | 0.489679 | 3.3:+80936445 | None:intergenic |
| CACAGGAGACATAAATCTGT+TGG | 0.502696 | 3.3:-80936382 | MS.gene049181:CDS |
| TATGAGGTTATTTCTTTAGG+AGG | 0.514646 | 3.3:-80936499 | MS.gene049181:CDS |
| GTGGTTGTTGAGTTTGAGGG+TGG | 0.516517 | 3.3:+80936449 | None:intergenic |
| GAAGTGGTTGTTGAGTTTGA+GGG | 0.525781 | 3.3:+80936446 | None:intergenic |
| ATATTGTAATTATCTGAAGC+TGG | 0.533222 | 3.3:+80936409 | None:intergenic |
| TTGATTGCTTTATACACAAG+AGG | 0.566790 | 3.3:+80936544 | None:intergenic |
| ATAATTACAATATTGGTCAC+AGG | 0.578276 | 3.3:-80936399 | MS.gene049181:CDS |
| GGTATTTGATTATGATGAAG+TGG | 0.585229 | 3.3:+80936430 | None:intergenic |
| ACAATAAGAAGTGTTATGGA+AGG | 0.606553 | 3.3:-80936574 | None:intergenic |
| AGGAAGCTACAACATAAGCA+TGG | 0.662553 | 3.3:-80936479 | MS.gene049181:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAAGTTTTTTTGAAGAATT+AGG | + | chr3.3:80936516-80936535 | None:intergenic | 20.0% |
| ! | ATAATTACAATATTGGTCAC+AGG | - | chr3.3:80936415-80936434 | MS.gene049181:CDS | 25.0% |
| ! | ATTCTTCAAAAAAACTTGTC+AGG | - | chr3.3:80936517-80936536 | MS.gene049181:CDS | 25.0% |
| ! | GCTTCAGATAATTACAATAT+TGG | - | chr3.3:80936408-80936427 | MS.gene049181:CDS | 25.0% |
| !! | AGAATGTTTTCATGTATCAA+GGG | - | chr3.3:80936552-80936571 | MS.gene049181:CDS | 25.0% |
| !! | ATATTGTAATTATCTGAAGC+TGG | + | chr3.3:80936408-80936427 | None:intergenic | 25.0% |
| !! | TAGAATGTTTTCATGTATCA+AGG | - | chr3.3:80936551-80936570 | MS.gene049181:CDS | 25.0% |
| GGTATTTGATTATGATGAAG+TGG | + | chr3.3:80936387-80936406 | None:intergenic | 30.0% | |
| TTGATTGCTTTATACACAAG+AGG | + | chr3.3:80936273-80936292 | None:intergenic | 30.0% | |
| ! | AAATCTGTTGGAGATAGTTT+TGG | - | chr3.3:80936444-80936463 | MS.gene049181:CDS | 30.0% |
| !! | CAGTATGAGGTTATTTCTTT+AGG | - | chr3.3:80936312-80936331 | MS.gene049181:CDS | 30.0% |
| !! | TATGAGGTTATTTCTTTAGG+AGG | - | chr3.3:80936315-80936334 | MS.gene049181:CDS | 30.0% |
| TTTCATGATCAGACAACAAC+TGG | - | chr3.3:80936480-80936499 | MS.gene049181:CDS | 35.0% | |
| !!! | GTTGGAGATAGTTTTGGTAA+TGG | - | chr3.3:80936450-80936469 | MS.gene049181:CDS | 35.0% |
| AGGAAGCTACAACATAAGCA+TGG | - | chr3.3:80936335-80936354 | MS.gene049181:CDS | 40.0% | |
| CACAGGAGACATAAATCTGT+TGG | - | chr3.3:80936432-80936451 | MS.gene049181:CDS | 40.0% | |
| GAAGTGGTTGTTGAGTTTGA+GGG | + | chr3.3:80936371-80936390 | None:intergenic | 40.0% | |
| TAGAACAAGACGACAGTATG+AGG | - | chr3.3:80936299-80936318 | MS.gene049181:CDS | 40.0% | |
| TGAAGTGGTTGTTGAGTTTG+AGG | + | chr3.3:80936372-80936391 | None:intergenic | 40.0% | |
| GTGGTTGTTGAGTTTGAGGG+TGG | + | chr3.3:80936368-80936387 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 80936255 | 80936581 | 80936255 | ID=MS.gene049181 |
| chr3.3 | mRNA | 80936255 | 80936581 | 80936255 | ID=MS.gene049181.t1;Parent=MS.gene049181 |
| chr3.3 | exon | 80936255 | 80936581 | 80936255 | ID=MS.gene049181.t1.exon1;Parent=MS.gene049181.t1 |
| chr3.3 | CDS | 80936255 | 80936581 | 80936255 | ID=cds.MS.gene049181.t1;Parent=MS.gene049181.t1 |
| Gene Sequence |
| Protein sequence |
