Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061427.t1 | XP_013447857.1 | 96.2 | 873 | 31 | 2 | 1 | 872 | 1 | 872 | 0.00E+00 | 1521.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061427.t1 | Q9C5S1 | 48.7 | 878 | 350 | 16 | 1 | 872 | 1 | 784 | 1.2e-206 | 721.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061427.t1 | A0A072TWN9 | 96.2 | 873 | 31 | 2 | 1 | 872 | 1 | 872 | 0.0e+00 | 1521.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050213 | MS.gene061427 | 0.809034 | 2.31E-50 | -1.69E-46 |
| MS.gene052776 | MS.gene061427 | 0.802957 | 4.38E-49 | -1.69E-46 |
| MS.gene053486 | MS.gene061427 | 0.805899 | 1.07E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene061427 | 0.809977 | 1.45E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061427.t1 | MTR_7g023250 | 96.564 | 873 | 28 | 2 | 1 | 872 | 1 | 872 | 0.0 | 1715 |
| MS.gene061427.t1 | MTR_3g086540 | 59.189 | 419 | 136 | 3 | 88 | 506 | 51 | 434 | 1.25e-170 | 509 |
| MS.gene061427.t1 | MTR_8g089710 | 55.677 | 458 | 139 | 5 | 57 | 492 | 33 | 448 | 1.00e-166 | 501 |
| MS.gene061427.t1 | MTR_4g117170 | 31.944 | 144 | 97 | 1 | 176 | 319 | 40 | 182 | 1.69e-19 | 87.4 |
| MS.gene061427.t1 | MTR_8g100000 | 34.483 | 145 | 90 | 2 | 175 | 315 | 690 | 833 | 4.59e-17 | 86.7 |
| MS.gene061427.t1 | MTR_3g498735 | 33.103 | 145 | 92 | 2 | 175 | 315 | 676 | 819 | 5.34e-17 | 86.7 |
| MS.gene061427.t1 | MTR_8g100000 | 34.483 | 145 | 90 | 2 | 175 | 315 | 732 | 875 | 5.60e-17 | 86.7 |
| MS.gene061427.t1 | MTR_5g084720 | 31.852 | 135 | 85 | 2 | 179 | 313 | 53 | 180 | 7.84e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061427.t1 | AT3G06110 | 34.028 | 144 | 94 | 1 | 172 | 315 | 23 | 165 | 1.86e-23 | 98.6 |
| MS.gene061427.t1 | AT3G06110 | 34.028 | 144 | 94 | 1 | 172 | 315 | 23 | 165 | 1.86e-23 | 98.6 |
| MS.gene061427.t1 | AT3G23610 | 32.653 | 147 | 98 | 1 | 171 | 317 | 48 | 193 | 3.98e-22 | 95.9 |
| MS.gene061427.t1 | AT3G23610 | 32.414 | 145 | 97 | 1 | 171 | 315 | 48 | 191 | 3.57e-21 | 92.8 |
| MS.gene061427.t1 | AT3G23610 | 32.639 | 144 | 96 | 1 | 171 | 314 | 48 | 190 | 6.59e-21 | 92.0 |
| MS.gene061427.t1 | AT3G23610 | 32.639 | 144 | 96 | 1 | 171 | 314 | 48 | 190 | 6.88e-21 | 92.0 |
| MS.gene061427.t1 | AT3G23610 | 32.639 | 144 | 96 | 1 | 171 | 314 | 48 | 190 | 1.28e-20 | 92.0 |
| MS.gene061427.t1 | AT3G06110 | 32.414 | 145 | 85 | 3 | 172 | 315 | 23 | 155 | 1.49e-19 | 87.0 |
| MS.gene061427.t1 | AT5G23720 | 32.414 | 145 | 93 | 2 | 175 | 315 | 621 | 764 | 2.07e-16 | 84.7 |
| MS.gene061427.t1 | AT5G23720 | 32.414 | 145 | 93 | 2 | 175 | 315 | 705 | 848 | 2.27e-16 | 84.7 |
| MS.gene061427.t1 | AT5G23720 | 32.414 | 145 | 93 | 2 | 175 | 315 | 696 | 839 | 2.35e-16 | 84.3 |
| MS.gene061427.t1 | AT2G04550 | 32.847 | 137 | 81 | 3 | 179 | 313 | 56 | 183 | 3.02e-12 | 68.2 |
| MS.gene061427.t1 | AT2G04550 | 34.711 | 121 | 68 | 3 | 179 | 297 | 56 | 167 | 6.03e-12 | 65.5 |
Find 201 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGTCTGCTTTGGATTCT+AGG | 0.128713 | 7.1:-75433169 | MS.gene061427:CDS |
| ACTGGTTGAGAACTATAATT+TGG | 0.250958 | 7.1:+75432432 | None:intergenic |
| CAAATTCCCGGAAAATGTTT+TGG | 0.263012 | 7.1:-75434174 | MS.gene061427:CDS |
| TTGATTACTTTGAGGATGTT+AGG | 0.266289 | 7.1:-75433490 | MS.gene061427:CDS |
| CCTTCAGTAGATAGTTTATC+TGG | 0.276754 | 7.1:-75432021 | MS.gene061427:CDS |
| AGGTATTGCTGATCCGAATA+TGG | 0.280862 | 7.1:-75433336 | MS.gene061427:CDS |
| TTCCTTCGGCGTTATATGTT+TGG | 0.283380 | 7.1:-75433127 | MS.gene061427:CDS |
| GTGAGGAACCACGTTCGTTT+TGG | 0.288504 | 7.1:-75432998 | MS.gene061427:CDS |
| CCTCTCCCACCAGGAGTAAT+AGG | 0.297230 | 7.1:+75433881 | None:intergenic |
| GGCATTTGGTGCAAATCATT+TGG | 0.302469 | 7.1:-75431890 | MS.gene061427:CDS |
| AATTTCACCGATCCGAATTC+CGG | 0.317202 | 7.1:-75434088 | MS.gene061427:CDS |
| AGGATTTGCGGCGGCGGAAC+GGG | 0.335561 | 7.1:+75434129 | None:intergenic |
| CCACCATTATTCCTACTATC+AGG | 0.342012 | 7.1:+75433758 | None:intergenic |
| GGATCCGTCTTTGTCTGCTT+TGG | 0.346747 | 7.1:-75433177 | MS.gene061427:CDS |
| TTGTTATTGCTTATCTTATG+TGG | 0.354511 | 7.1:-75433409 | MS.gene061427:CDS |
| GCAGTTGACTGGAACAAAAT+TGG | 0.360784 | 7.1:-75431724 | MS.gene061427:CDS |
| AGGATCGATTATCATGATTA+AGG | 0.361414 | 7.1:-75433024 | MS.gene061427:CDS |
| GATAGACAGCCTGATTTGAT+TGG | 0.364391 | 7.1:-75431748 | MS.gene061427:CDS |
| CATGCCACCTTTCAAATTCC+CGG | 0.370480 | 7.1:-75434186 | MS.gene061427:CDS |
| GATAGGGAGTTCTTTCAAAC+TGG | 0.379216 | 7.1:-75431797 | MS.gene061427:CDS |
| CGTTCAGCAATGGAAGTTGA+TGG | 0.379234 | 7.1:+75432330 | None:intergenic |
| GCATTTGGTGCAAATCATTT+GGG | 0.381223 | 7.1:-75431889 | MS.gene061427:CDS |
| GCTCTTTGTTGAGAATGTAT+AGG | 0.383451 | 7.1:-75433253 | MS.gene061427:CDS |
| TTAGAAAAGATTGAGGCATT+TGG | 0.383736 | 7.1:-75431904 | MS.gene061427:CDS |
| CTCCAACTACTCTCTCTTGC+AGG | 0.386094 | 7.1:+75432777 | None:intergenic |
| TTGCCTTTGATGGACATGTC+TGG | 0.387446 | 7.1:-75432957 | MS.gene061427:CDS |
| CGCAAATCCTTCCGGTGAAC+CGG | 0.393028 | 7.1:-75434116 | MS.gene061427:CDS |
| AAAACGAGAGAGGAAGAATC+TGG | 0.393317 | 7.1:+75432510 | None:intergenic |
| CGACTGGAAGGAATAGTTGA+TGG | 0.394521 | 7.1:+75432240 | None:intergenic |
| ATTGCTAGAATCAGAAGAAA+TGG | 0.397572 | 7.1:+75432560 | None:intergenic |
| AACTGGATGCTTCACATGTT+CGG | 0.398281 | 7.1:-75431780 | MS.gene061427:CDS |
| AATCCTGATAGTAGGAATAA+TGG | 0.400129 | 7.1:-75433761 | MS.gene061427:CDS |
| AGTAATAGTAGTAATAATAA+TGG | 0.400503 | 7.1:-75433827 | MS.gene061427:CDS |
| GAATCAGAAGAAATGGAATC+TGG | 0.401454 | 7.1:+75432567 | None:intergenic |
| TTTGTCTGCTTTGGATTCTA+GGG | 0.403725 | 7.1:-75433168 | MS.gene061427:CDS |
| ATAGACAGCCTGATTTGATT+GGG | 0.406982 | 7.1:-75431747 | MS.gene061427:CDS |
| CCACCACCACTGCCGGAATT+CGG | 0.408779 | 7.1:+75434076 | None:intergenic |
| ATTTGATTGGGGCAGTTGAC+TGG | 0.410264 | 7.1:-75431735 | MS.gene061427:CDS |
| TTGCAATTCTGCTGTGACCT+TGG | 0.412133 | 7.1:+75434013 | None:intergenic |
| TACTCTCTCTTGCAGGAAGA+TGG | 0.421748 | 7.1:+75432784 | None:intergenic |
| AAGGATTTGCGGCGGCGGAA+CGG | 0.421804 | 7.1:+75434128 | None:intergenic |
| GACGGATCCGTCAACATCTT+CGG | 0.422116 | 7.1:+75433191 | None:intergenic |
| TGATTACTTTGAGGATGTTA+GGG | 0.423136 | 7.1:-75433489 | MS.gene061427:CDS |
| TGTGCCTCCGTTTGCATCAT+CGG | 0.425195 | 7.1:-75432823 | MS.gene061427:CDS |
| TGCTGTGACCTTGGCGTCAA+AGG | 0.428961 | 7.1:+75434022 | None:intergenic |
| GGATCGGTGAAATTCGATTC+CGG | 0.429389 | 7.1:+75434097 | None:intergenic |
| AAGCGAGTTCCGATGATATC+GGG | 0.431247 | 7.1:-75433919 | MS.gene061427:CDS |
| AGTTGTTGCAGTGTCAGAAA+AGG | 0.431769 | 7.1:-75433301 | MS.gene061427:CDS |
| TCCGCCGCCGCAAATCCTTC+CGG | 0.433567 | 7.1:-75434124 | MS.gene061427:CDS |
| CCCTTGGTAATGATAACTTA+GGG | 0.438101 | 7.1:+75432703 | None:intergenic |
| AGAATAATAATCCTGATAGT+AGG | 0.438363 | 7.1:-75433769 | MS.gene061427:CDS |
| ATATCATCGGAACTCGCTTT+CGG | 0.442175 | 7.1:+75433923 | None:intergenic |
| AAAGCGAGTTCCGATGATAT+CGG | 0.445061 | 7.1:-75433920 | MS.gene061427:CDS |
| CGGTTCACCGGAAGGATTTG+CGG | 0.446551 | 7.1:+75434117 | None:intergenic |
| GTTGCTGAACATGTTTATCT+TGG | 0.448416 | 7.1:-75433686 | MS.gene061427:CDS |
| TGACAAGCGAAACCCATATT+CGG | 0.448761 | 7.1:+75433323 | None:intergenic |
| CCGAATTCCGGCAGTGGTGG+TGG | 0.450748 | 7.1:-75434076 | MS.gene061427:CDS |
| GGTATTGCTGATCCGAATAT+GGG | 0.453348 | 7.1:-75433335 | MS.gene061427:CDS |
| GACCTTGGCGTCAAAGGCGG+TGG | 0.453467 | 7.1:+75434028 | None:intergenic |
| ACTCCTGGTGGGAGAGGTAA+TGG | 0.460370 | 7.1:-75433875 | MS.gene061427:CDS |
| GTGTTTGTTCATTGTTGTCA+AGG | 0.460704 | 7.1:-75433452 | MS.gene061427:CDS |
| TGCCTTTGATGGACATGTCT+GGG | 0.461962 | 7.1:-75432956 | MS.gene061427:CDS |
| TTCCTGCAAGAGAGAGTAGT+TGG | 0.463033 | 7.1:-75432779 | MS.gene061427:CDS |
| TCAACTGCCCCAATCAAATC+AGG | 0.464657 | 7.1:+75431739 | None:intergenic |
| TAAGTATTGTGCGGCTATCA+TGG | 0.465295 | 7.1:-75433099 | MS.gene061427:CDS |
| GAGGATGTTAGGGAAAAGAA+TGG | 0.472600 | 7.1:-75433479 | MS.gene061427:CDS |
| GTTTATTGTGCACATTCCTT+CGG | 0.473183 | 7.1:-75433141 | MS.gene061427:CDS |
| TGATGTGTTTGATTACTTTG+AGG | 0.476178 | 7.1:-75433498 | MS.gene061427:CDS |
| CTCCACCGCCTTTGACGCCA+AGG | 0.476639 | 7.1:-75434030 | MS.gene061427:CDS |
| ACCGGAAGGATTTGCGGCGG+CGG | 0.476669 | 7.1:+75434123 | None:intergenic |
| GAAATTCGATTCCGGTTCAC+CGG | 0.477328 | 7.1:+75434105 | None:intergenic |
| GCTGAACATGTTTATCTTGG+TGG | 0.480796 | 7.1:-75433683 | MS.gene061427:CDS |
| CTTGGCGTCAAAGGCGGTGG+AGG | 0.482350 | 7.1:+75434031 | None:intergenic |
| AGCCGCTTTCGATTGCTCGC+CGG | 0.483522 | 7.1:-75433961 | MS.gene061427:CDS |
| TTCGATTCCGGTTCACCGGA+AGG | 0.488338 | 7.1:+75434109 | None:intergenic |
| ACCGATCCGAATTCCGGCAG+TGG | 0.489853 | 7.1:-75434082 | MS.gene061427:CDS |
| AACAAAGAGCTTGGACTAAG+TGG | 0.490105 | 7.1:+75433266 | None:intergenic |
| ACCCTTGGTAATGATAACTT+AGG | 0.490670 | 7.1:+75432702 | None:intergenic |
| GAGAGAAACTCCTTCACATC+AGG | 0.491036 | 7.1:+75432729 | None:intergenic |
| TACATTCTCAACAAAGAGCT+TGG | 0.497832 | 7.1:+75433257 | None:intergenic |
| TCGGCGTTATATGTTTGGAT+TGG | 0.499633 | 7.1:-75433122 | MS.gene061427:CDS |
| CTTGCATGCATATGTATGCT+TGG | 0.499660 | 7.1:+75431838 | None:intergenic |
| CGGGAATTTGAAAGGTGGCA+TGG | 0.502986 | 7.1:+75434187 | None:intergenic |
| GCAATGAACCATCAGTTCTC+AGG | 0.505417 | 7.1:-75432056 | MS.gene061427:CDS |
| GTTGTTGCAGTGTCAGAAAA+GGG | 0.508525 | 7.1:-75433300 | MS.gene061427:CDS |
| CCCACGCTATCAGCAATGTC+TGG | 0.508926 | 7.1:+75432081 | None:intergenic |
| TGTTTGTTCATTGTTGTCAA+GGG | 0.515447 | 7.1:-75433451 | MS.gene061427:CDS |
| ACTCTCTCTTGCAGGAAGAT+GGG | 0.518329 | 7.1:+75432785 | None:intergenic |
| TGCAAATCATTTGGGTTCAG+AGG | 0.518719 | 7.1:-75431881 | MS.gene061427:CDS |
| GAGCAATCGAAAGCGGCTGA+AGG | 0.519600 | 7.1:+75433966 | None:intergenic |
| AAGGGATGCTAGAGGGGCTG+CGG | 0.520478 | 7.1:-75433075 | MS.gene061427:CDS |
| TCTTGTTCCGAAGATGTTGA+CGG | 0.520562 | 7.1:-75433198 | MS.gene061427:CDS |
| TCGAATCGATTTGGCATGGT+GGG | 0.521287 | 7.1:-75434229 | None:intergenic |
| CCCTAAGTTATCATTACCAA+GGG | 0.521837 | 7.1:-75432703 | MS.gene061427:CDS |
| ATGGAATCTGGAGAAACAAA+AGG | 0.523568 | 7.1:+75432579 | None:intergenic |
| ATCGAAAGCGGCTGAAGGGG+CGG | 0.525187 | 7.1:+75433971 | None:intergenic |
| TACAAAGTTTAGTATATCGC+TGG | 0.526719 | 7.1:-75431933 | MS.gene061427:CDS |
| TTGAAGTCTGCATCATCAAA+GGG | 0.527606 | 7.1:-75431991 | MS.gene061427:CDS |
| AGCAATCGAAAGCGGCTGAA+GGG | 0.531267 | 7.1:+75433967 | None:intergenic |
| TTTGAAGTCTGCATCATCAA+AGG | 0.533322 | 7.1:-75431992 | MS.gene061427:CDS |
| GGGCTGCGGATCAGATTGTC+CGG | 0.533827 | 7.1:-75433061 | MS.gene061427:CDS |
| GCAATGTCTGGACATGAAGC+TGG | 0.534202 | 7.1:+75432093 | None:intergenic |
| AAACGAGAGAGGAAGAATCT+GGG | 0.536025 | 7.1:+75432511 | None:intergenic |
| TCATGGAAAGGGATGCTAGA+GGG | 0.536253 | 7.1:-75433082 | MS.gene061427:CDS |
| CCACAACCACCTATTACTCC+TGG | 0.537279 | 7.1:-75433890 | MS.gene061427:CDS |
| ATTATCTCCACCACCACTGC+CGG | 0.538788 | 7.1:+75434069 | None:intergenic |
| AGGATGTTAGGGAAAAGAAT+GGG | 0.538950 | 7.1:-75433478 | MS.gene061427:CDS |
| GCAATCGAAAGCGGCTGAAG+GGG | 0.539990 | 7.1:+75433968 | None:intergenic |
| ATCAACTATTCCTTCCAGTC+GGG | 0.542142 | 7.1:-75432238 | MS.gene061427:CDS |
| CCTATTACTCCTGGTGGGAG+AGG | 0.542296 | 7.1:-75433881 | MS.gene061427:CDS |
| GCTTATCTTATGTGGAGGGA+AGG | 0.549467 | 7.1:-75433401 | MS.gene061427:CDS |
| ATGGAATCTGAATAAACCCT+TGG | 0.549789 | 7.1:+75432687 | None:intergenic |
| ACTACCTCTGCGTTCAGCAA+TGG | 0.550884 | 7.1:+75432320 | None:intergenic |
| TCCAGACATTGCTGATAGCG+TGG | 0.553859 | 7.1:-75432082 | MS.gene061427:CDS |
| ATTTGCGGCGGCGGAACGGG+CGG | 0.555854 | 7.1:+75434132 | None:intergenic |
| GTTGACAACATTGACGGTGA+TGG | 0.555931 | 7.1:+75432633 | None:intergenic |
| GATCCGAATTCCGGCAGTGG+TGG | 0.558814 | 7.1:-75434079 | MS.gene061427:CDS |
| AGAAACAAAAGGAGGTGAAG+AGG | 0.559901 | 7.1:+75432590 | None:intergenic |
| AAGGCGGTGGAGGAAATCTC+CGG | 0.560468 | 7.1:+75434041 | None:intergenic |
| ATCCTTGCACTCTCTCATAC+CGG | 0.560757 | 7.1:+75433042 | None:intergenic |
| CTCCCAGACATGTCCATCAA+AGG | 0.564021 | 7.1:+75432954 | None:intergenic |
| GAGTCAGTTGACAACATTGA+CGG | 0.564336 | 7.1:+75432627 | None:intergenic |
| TTGTCTGCTTTGGATTCTAG+GGG | 0.565145 | 7.1:-75433167 | MS.gene061427:CDS |
| TCATTCTCCGATGATGCAAA+CGG | 0.566987 | 7.1:+75432816 | None:intergenic |
| AAATCACCTTTAAAATACTC+AGG | 0.568354 | 7.1:+75433581 | None:intergenic |
| ACACAGTTCCTGAGAACTGA+TGG | 0.568539 | 7.1:+75432048 | None:intergenic |
| AAATTCCTGTCCTGATGTGA+AGG | 0.569689 | 7.1:-75432739 | MS.gene061427:CDS |
| GCCAAGTTTAGAAAAGATTG+AGG | 0.571378 | 7.1:-75431911 | MS.gene061427:CDS |
| CTTATCTTATGTGGAGGGAA+GGG | 0.572287 | 7.1:-75433400 | MS.gene061427:CDS |
| CAAAGATGAAGATACTGAGA+CGG | 0.574070 | 7.1:+75432482 | None:intergenic |
| CATGGAAAGGGATGCTAGAG+GGG | 0.574678 | 7.1:-75433081 | MS.gene061427:CDS |
| GCATCCACTTTCCTCTCACC+AGG | 0.576849 | 7.1:+75432894 | None:intergenic |
| CCAGGAGTAATAGGTGGTTG+TGG | 0.578018 | 7.1:+75433890 | None:intergenic |
| ATTCCTTCCAGTCGGGAACA+TGG | 0.579148 | 7.1:-75432231 | MS.gene061427:CDS |
| AAACTCCTTCACATCAGGAC+AGG | 0.581663 | 7.1:+75432734 | None:intergenic |
| GTGGTGGAGATAATACCAAC+CGG | 0.582160 | 7.1:-75434060 | MS.gene061427:CDS |
| TGGCCACTCCCCGATATCAT+CGG | 0.582916 | 7.1:+75433910 | None:intergenic |
| TTGTGCGGCTATCATGGAAA+GGG | 0.583248 | 7.1:-75433093 | MS.gene061427:CDS |
| ATCTTCGGAACAAGATGCAA+AGG | 0.584565 | 7.1:+75433206 | None:intergenic |
| TTATTGCTTATCTTATGTGG+AGG | 0.584840 | 7.1:-75433406 | MS.gene061427:CDS |
| CATCAACTATTCCTTCCAGT+CGG | 0.585320 | 7.1:-75432239 | MS.gene061427:CDS |
| CCCCTAAGTTATCATTACCA+AGG | 0.586855 | 7.1:-75432704 | MS.gene061427:CDS |
| GTAGTAATAATAATGGTGAA+AGG | 0.588930 | 7.1:-75433820 | MS.gene061427:CDS |
| CTCGCCGGAGTTTAGATGAG+TGG | 0.589080 | 7.1:-75433946 | MS.gene061427:CDS |
| ACAAGATGCAAAGGATCATA+CGG | 0.589777 | 7.1:+75433215 | None:intergenic |
| ATTGTTGTCAAGGGGTGTCG+AGG | 0.590797 | 7.1:-75433442 | MS.gene061427:CDS |
| CCAGATAAACTATCTACTGA+AGG | 0.592515 | 7.1:+75432021 | None:intergenic |
| TCGATTATCATGATTAAGGA+AGG | 0.594375 | 7.1:-75433020 | MS.gene061427:CDS |
| TTCAGAAAAGCCATCGTGGG+AGG | 0.595501 | 7.1:-75432849 | MS.gene061427:CDS |
| TATTGCTTATCTTATGTGGA+GGG | 0.595972 | 7.1:-75433405 | MS.gene061427:CDS |
| GTTTGTTCATTGTTGTCAAG+GGG | 0.598014 | 7.1:-75433450 | MS.gene061427:CDS |
| GAATCCAAAGCAGACAAAGA+CGG | 0.598188 | 7.1:+75433173 | None:intergenic |
| GTCCGGTATGAGAGAGTGCA+AGG | 0.602354 | 7.1:-75433044 | MS.gene061427:CDS |
| AAAGGATCATACGGCGAGTG+AGG | 0.606806 | 7.1:+75433224 | None:intergenic |
| CAGTTTGTGAAGGCGGCGAG+AGG | 0.607174 | 7.1:-75433356 | MS.gene061427:CDS |
| ACACCATGTTCCCGACTGGA+AGG | 0.607395 | 7.1:+75432228 | None:intergenic |
| TTTGTGTTATCATTCATGAG+AGG | 0.610912 | 7.1:+75432276 | None:intergenic |
| ACTGTGGATATCTGTACAGT+TGG | 0.612503 | 7.1:+75432407 | None:intergenic |
| ATTGTGCGGCTATCATGGAA+AGG | 0.612909 | 7.1:-75433094 | MS.gene061427:CDS |
| TGTGACCTTGGCGTCAAAGG+CGG | 0.613053 | 7.1:+75434025 | None:intergenic |
| AAAGATGAAGATACTGAGAC+GGG | 0.615809 | 7.1:+75432483 | None:intergenic |
| ACCACTGCCGGAATTCGGAT+CGG | 0.616777 | 7.1:+75434081 | None:intergenic |
| AACGAGAGAGGAAGAATCTG+GGG | 0.619918 | 7.1:+75432512 | None:intergenic |
| TCAAAGGGAGATTACGAGAG+TGG | 0.621777 | 7.1:-75431976 | MS.gene061427:CDS |
| CTCCGGCGAGCAATCGAAAG+CGG | 0.624516 | 7.1:+75433959 | None:intergenic |
| TTACCATTACCTCTCCCACC+AGG | 0.625654 | 7.1:+75433872 | None:intergenic |
| TATCATGATTAAGGAAGGTG+AGG | 0.626606 | 7.1:-75433015 | MS.gene061427:CDS |
| TAGACAGCCTGATTTGATTG+GGG | 0.632885 | 7.1:-75431746 | MS.gene061427:CDS |
| ATCCAAACATATAACGCCGA+AGG | 0.633669 | 7.1:+75433125 | None:intergenic |
| CCTGATAGTAGGAATAATGG+TGG | 0.635478 | 7.1:-75433758 | MS.gene061427:CDS |
| AGCGAGTTCCGATGATATCG+GGG | 0.636424 | 7.1:-75433918 | MS.gene061427:CDS |
| AAGAACACCATGTTCCCGAC+TGG | 0.638498 | 7.1:+75432224 | None:intergenic |
| ACAATGAACTCAGCAGAGCA+AGG | 0.638990 | 7.1:+75430795 | None:intergenic |
| GTTCCGATGATATCGGGGAG+TGG | 0.639001 | 7.1:-75433913 | MS.gene061427:CDS |
| TTCACCGGAAGGATTTGCGG+CGG | 0.641408 | 7.1:+75434120 | None:intergenic |
| CAACCACCTATTACTCCTGG+TGG | 0.643523 | 7.1:-75433887 | MS.gene061427:CDS |
| CCTTGGTAATGATAACTTAG+GGG | 0.645677 | 7.1:+75432704 | None:intergenic |
| AACCACCTATTACTCCTGGT+GGG | 0.645942 | 7.1:-75433886 | MS.gene061427:CDS |
| ATACTAGTAATATCCTCACT+AGG | 0.646717 | 7.1:+75433527 | None:intergenic |
| GTTACAAGATAGTCCTAGTG+AGG | 0.647978 | 7.1:-75433540 | MS.gene061427:CDS |
| AAGGTCACAGCAGAATTGCA+AGG | 0.648470 | 7.1:-75434011 | MS.gene061427:CDS |
| CCAGACATTGCTGATAGCGT+GGG | 0.649233 | 7.1:-75432081 | MS.gene061427:CDS |
| ATGTTAGGGAAAAGAATGGG+AGG | 0.650783 | 7.1:-75433475 | MS.gene061427:CDS |
| TGTTAGGGAAAAGAATGGGA+GGG | 0.656791 | 7.1:-75433474 | MS.gene061427:CDS |
| CTCCCACCAGGAGTAATAGG+TGG | 0.667076 | 7.1:+75433884 | None:intergenic |
| GCAGATCGAGAACATAGATG+TGG | 0.667316 | 7.1:+75432372 | None:intergenic |
| ATATCTGTACAGTTGGACAC+TGG | 0.675328 | 7.1:+75432414 | None:intergenic |
| ATCATGGAAAGGGATGCTAG+AGG | 0.675923 | 7.1:-75433083 | MS.gene061427:CDS |
| CGGTGGAGGAAATCTCCGGT+TGG | 0.676976 | 7.1:+75434045 | None:intergenic |
| ACTTCCATTGCTGAACGCAG+AGG | 0.680053 | 7.1:-75432324 | MS.gene061427:CDS |
| AGCAGAGCAAGGAACTCTTG+TGG | 0.680964 | 7.1:+75430806 | None:intergenic |
| GAATCTGGAGAAACAAAAGG+AGG | 0.683570 | 7.1:+75432582 | None:intergenic |
| TTCTCCGATGATGCAAACGG+AGG | 0.687515 | 7.1:+75432819 | None:intergenic |
| AAAGCATCCCAAAACGAACG+TGG | 0.693995 | 7.1:+75432990 | None:intergenic |
| AGATGTATGAATGCACAACA+TGG | 0.702134 | 7.1:+75432668 | None:intergenic |
| TCGGCCACTCATCTAAACTC+CGG | 0.702273 | 7.1:+75433942 | None:intergenic |
| AGGCACAAAACCTCCCACGA+TGG | 0.704213 | 7.1:+75432839 | None:intergenic |
| GCCGCACAATACAGTCACCA+AGG | 0.707837 | 7.1:-75431674 | MS.gene061427:intron |
| TTGGATTGGTAAGTATTGTG+CGG | 0.708780 | 7.1:-75433108 | MS.gene061427:CDS |
| ACCTTGGTGACTGTATTGTG+CGG | 0.749659 | 7.1:+75431673 | None:intergenic |
| GTGGCGATAACTTGACACTG+TGG | 0.783804 | 7.1:+75432391 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAAAAAAAATGAATG+TGG | + | chr7.1:75433881-75433900 | None:intergenic | 10.0% |
| !! | CATTTATATTATATATCAAA+AGG | + | chr7.1:75433437-75433456 | None:intergenic | 10.0% |
| !!! | CTTTTGATATATAATATAAA+TGG | - | chr7.1:75433435-75433454 | MS.gene061427:CDS | 10.0% |
| !! | AAAGAAAAAACTCAAAAAAA+AGG | - | chr7.1:75433904-75433923 | MS.gene061427:CDS | 15.0% |
| !! | AGTAATAGTAGTAATAATAA+TGG | - | chr7.1:75431180-75431199 | MS.gene061427:intron | 15.0% |
| !! | ATTATAACATAAATCAACAA+AGG | + | chr7.1:75434050-75434069 | None:intergenic | 15.0% |
| !!! | GATTGATAATTTAATATAAG+AGG | - | chr7.1:75433580-75433599 | MS.gene061427:CDS | 15.0% |
| !!! | TTTCATTTTTTCTATTTTCA+CGG | - | chr7.1:75434075-75434094 | MS.gene061427:CDS | 15.0% |
| !!! | ATGAAGTATTAATGCTAAAT+AGG | + | chr7.1:75433627-75433646 | None:intergenic | 20.0% |
| !!! | TGAAGTATTAATGCTAAATA+GGG | + | chr7.1:75433626-75433645 | None:intergenic | 20.0% |
| ! | AAAAAAATGAATGTGGTTTG+TGG | + | chr7.1:75433874-75433893 | None:intergenic | 25.0% |
| ! | AACTAAACCTATTGTAAGTT+TGG | - | chr7.1:75433779-75433798 | MS.gene061427:CDS | 25.0% |
| ! | ACTAAACCTATTGTAAGTTT+GGG | - | chr7.1:75433780-75433799 | MS.gene061427:CDS | 25.0% |
| ! | AGAATAATAATCCTGATAGT+AGG | - | chr7.1:75431238-75431257 | MS.gene061427:intron | 25.0% |
| ! | GATAAATACATTCCAAAAGA+AGG | + | chr7.1:75433852-75433871 | None:intergenic | 25.0% |
| ! | GCATTAATACTTCATATTGA+AGG | - | chr7.1:75433632-75433651 | MS.gene061427:CDS | 25.0% |
| ! | GTAGTAATAATAATGGTGAA+AGG | - | chr7.1:75431187-75431206 | MS.gene061427:intron | 25.0% |
| !! | AAACATTGCAGTATTTTCTT+TGG | - | chr7.1:75433518-75433537 | MS.gene061427:CDS | 25.0% |
| !! | AAAGAGATACTTCCTATTTT+GGG | + | chr7.1:75433546-75433565 | None:intergenic | 25.0% |
| !! | AAATTGATGATCAGCTTAAA+TGG | - | chr7.1:75433929-75433948 | MS.gene061427:CDS | 25.0% |
| !! | AACGTTTTGTATATTTGGAT+AGG | - | chr7.1:75433193-75433212 | MS.gene061427:CDS | 25.0% |
| !! | ACGTTTTGTATATTTGGATA+GGG | - | chr7.1:75433194-75433213 | MS.gene061427:CDS | 25.0% |
| !! | AGAAAATACTGCAATGTTTT+TGG | + | chr7.1:75433517-75433536 | None:intergenic | 25.0% |
| !! | CAAGAAACGTTTTGTATATT+TGG | - | chr7.1:75433188-75433207 | MS.gene061427:CDS | 25.0% |
| !! | TTAAAGGTGATTTTGTGTAT+AGG | - | chr7.1:75431436-75431455 | MS.gene061427:intron | 25.0% |
| !! | TTCTCTTTAACAATCTGTTT+TGG | + | chr7.1:75434174-75434193 | None:intergenic | 25.0% |
| !! | TTGTTATTGCTTATCTTATG+TGG | - | chr7.1:75431598-75431617 | MS.gene061427:intron | 25.0% |
| !!! | AAATCACCTTTAAAATACTC+AGG | + | chr7.1:75431429-75431448 | None:intergenic | 25.0% |
| !!! | CATTCACCTTTTAAGATTTT+TGG | - | chr7.1:75433822-75433841 | MS.gene061427:CDS | 25.0% |
| AATCCTGATAGTAGGAATAA+TGG | - | chr7.1:75431246-75431265 | MS.gene061427:intron | 30.0% | |
| ACTGCTAATGTAAAAAATGG+AGG | - | chr7.1:75432866-75432885 | MS.gene061427:CDS | 30.0% | |
| ACTGGTTGAGAACTATAATT+TGG | + | chr7.1:75432578-75432597 | None:intergenic | 30.0% | |
| AGGATCGATTATCATGATTA+AGG | - | chr7.1:75431983-75432002 | MS.gene061427:CDS | 30.0% | |
| ATACTAGTAATATCCTCACT+AGG | + | chr7.1:75431483-75431502 | None:intergenic | 30.0% | |
| ATTGCTAGAATCAGAAGAAA+TGG | + | chr7.1:75432450-75432469 | None:intergenic | 30.0% | |
| GATGCAAATTGATTATAGTG+TGG | + | chr7.1:75433402-75433421 | None:intergenic | 30.0% | |
| TACAAAGTTTAGTATATCGC+TGG | - | chr7.1:75433074-75433093 | MS.gene061427:CDS | 30.0% | |
| TATTGCTTATCTTATGTGGA+GGG | - | chr7.1:75431602-75431621 | MS.gene061427:intron | 30.0% | |
| TCCACTGCTAATGTAAAAAA+TGG | - | chr7.1:75432863-75432882 | MS.gene061427:CDS | 30.0% | |
| TCGATTATCATGATTAAGGA+AGG | - | chr7.1:75431987-75432006 | MS.gene061427:CDS | 30.0% | |
| TGATGTGTTTGATTACTTTG+AGG | - | chr7.1:75431509-75431528 | MS.gene061427:intron | 30.0% | |
| TGTTGTATAAATGCACGAAA+TGG | - | chr7.1:75433468-75433487 | MS.gene061427:CDS | 30.0% | |
| TGTTTGTTCATTGTTGTCAA+GGG | - | chr7.1:75431556-75431575 | MS.gene061427:intron | 30.0% | |
| TTATTGCTTATCTTATGTGG+AGG | - | chr7.1:75431601-75431620 | MS.gene061427:intron | 30.0% | |
| TTTGTGTTATCATTCATGAG+AGG | + | chr7.1:75432734-75432753 | None:intergenic | 30.0% | |
| ! | AAATAATGGAATACATGTGC+CGG | + | chr7.1:75433685-75433704 | None:intergenic | 30.0% |
| ! | ATTTTGTGTATAGGACTTTG+TGG | - | chr7.1:75431445-75431464 | MS.gene061427:intron | 30.0% |
| ! | GAAAGAGATACTTCCTATTT+TGG | + | chr7.1:75433547-75433566 | None:intergenic | 30.0% |
| ! | TCAAGTGTTAGAATTTTTCC+TGG | - | chr7.1:75432095-75432114 | MS.gene061427:CDS | 30.0% |
| ! | TGATTACTTTGAGGATGTTA+GGG | - | chr7.1:75431518-75431537 | MS.gene061427:intron | 30.0% |
| ! | TTAGAAAAGATTGAGGCATT+TGG | - | chr7.1:75433103-75433122 | MS.gene061427:CDS | 30.0% |
| ! | TTCAAAGTTTTTGCCTTTGA+TGG | - | chr7.1:75432040-75432059 | MS.gene061427:CDS | 30.0% |
| ! | TTGATTACTTTGAGGATGTT+AGG | - | chr7.1:75431517-75431536 | MS.gene061427:intron | 30.0% |
| !! | ACTCATGTTTTGAATTGTGT+TGG | - | chr7.1:75431393-75431412 | MS.gene061427:intron | 30.0% |
| !! | AGAGAGATTTTGAAAAGGAA+TGG | - | chr7.1:75431366-75431385 | MS.gene061427:intron | 30.0% |
| !! | AGAGTAGTTGGAGTATTTTA+AGG | - | chr7.1:75432240-75432259 | MS.gene061427:CDS | 30.0% |
| !! | GAGAGATTTTGAAAAGGAAT+GGG | - | chr7.1:75431367-75431386 | MS.gene061427:intron | 30.0% |
| !! | GAGATAGAGAGATTTTGAAA+AGG | - | chr7.1:75431361-75431380 | MS.gene061427:intron | 30.0% |
| !!! | CACCTTTTAAGATTTTTGGT+TGG | - | chr7.1:75433826-75433845 | MS.gene061427:CDS | 30.0% |
| !!! | GAAGTTGATGGTTTTTTCAA+TGG | + | chr7.1:75432668-75432687 | None:intergenic | 30.0% |
| !!! | TCCATTTTTTACATTAGCAG+TGG | + | chr7.1:75432867-75432886 | None:intergenic | 30.0% |
| !!! | TGGTTTTTTCAATGGTAAAG+AGG | + | chr7.1:75432660-75432679 | None:intergenic | 30.0% |
| AAAGATGAAGATACTGAGAC+GGG | + | chr7.1:75432527-75432546 | None:intergenic | 35.0% | |
| ACAAAGGCTAACACAAGAAA+AGG | + | chr7.1:75434034-75434053 | None:intergenic | 35.0% | |
| ACAAGATGCAAAGGATCATA+CGG | + | chr7.1:75431795-75431814 | None:intergenic | 35.0% | |
| AGAGATAAGATCACATACCT+TGG | + | chr7.1:75433353-75433372 | None:intergenic | 35.0% | |
| AGATGTATGAATGCACAACA+TGG | + | chr7.1:75432342-75432361 | None:intergenic | 35.0% | |
| AGGATGTTAGGGAAAAGAAT+GGG | - | chr7.1:75431529-75431548 | MS.gene061427:intron | 35.0% | |
| ATCTCTTTCCATTTCAGAGT+GGG | - | chr7.1:75433558-75433577 | MS.gene061427:CDS | 35.0% | |
| ATGGAATCTGAATAAACCCT+TGG | + | chr7.1:75432323-75432342 | None:intergenic | 35.0% | |
| ATGGAATCTGGAGAAACAAA+AGG | + | chr7.1:75432431-75432450 | None:intergenic | 35.0% | |
| CAAAGATGAAGATACTGAGA+CGG | + | chr7.1:75432528-75432547 | None:intergenic | 35.0% | |
| CCAGATAAACTATCTACTGA+AGG | + | chr7.1:75432989-75433008 | None:intergenic | 35.0% | |
| CCCTAAGTTATCATTACCAA+GGG | - | chr7.1:75432304-75432323 | MS.gene061427:CDS | 35.0% | |
| CCTTCAGTAGATAGTTTATC+TGG | - | chr7.1:75432986-75433005 | MS.gene061427:CDS | 35.0% | |
| GAATCAGAAGAAATGGAATC+TGG | + | chr7.1:75432443-75432462 | None:intergenic | 35.0% | |
| GCCAAGTTTAGAAAAGATTG+AGG | - | chr7.1:75433096-75433115 | MS.gene061427:CDS | 35.0% | |
| GCTCTTTGTTGAGAATGTAT+AGG | - | chr7.1:75431754-75431773 | MS.gene061427:CDS | 35.0% | |
| GGCCAACCAAAAATCTTAAA+AGG | + | chr7.1:75433831-75433850 | None:intergenic | 35.0% | |
| GTGTTTGTTCATTGTTGTCA+AGG | - | chr7.1:75431555-75431574 | MS.gene061427:intron | 35.0% | |
| GTTGCTGAACATGTTTATCT+TGG | - | chr7.1:75431321-75431340 | MS.gene061427:intron | 35.0% | |
| GTTTATTGTGCACATTCCTT+CGG | - | chr7.1:75431866-75431885 | MS.gene061427:CDS | 35.0% | |
| GTTTGTTCATTGTTGTCAAG+GGG | - | chr7.1:75431557-75431576 | MS.gene061427:intron | 35.0% | |
| TACATTCTCAACAAAGAGCT+TGG | + | chr7.1:75431753-75431772 | None:intergenic | 35.0% | |
| TATCATGATTAAGGAAGGTG+AGG | - | chr7.1:75431992-75432011 | MS.gene061427:CDS | 35.0% | |
| TATCTCTTTCCATTTCAGAG+TGG | - | chr7.1:75433557-75433576 | MS.gene061427:CDS | 35.0% | |
| TTGAAGTCTGCATCATCAAA+GGG | - | chr7.1:75433016-75433035 | MS.gene061427:CDS | 35.0% | |
| ! | ACATTTTCCGGGAATTTGAA+AGG | + | chr7.1:75430831-75430850 | None:intergenic | 35.0% |
| ! | ACTTCATATTGAAGGTGTGT+CGG | - | chr7.1:75433640-75433659 | MS.gene061427:CDS | 35.0% |
| ! | ATAGACAGCCTGATTTGATT+GGG | - | chr7.1:75433260-75433279 | MS.gene061427:CDS | 35.0% |
| ! | CAAATTCCCGGAAAATGTTT+TGG | - | chr7.1:75430833-75430852 | MS.gene061427:intron | 35.0% |
| ! | GCCTCAATCTTTTCTAAACT+TGG | + | chr7.1:75433100-75433119 | None:intergenic | 35.0% |
| ! | TGATGCTTTTCAGTTTGTGA+AGG | - | chr7.1:75431641-75431660 | MS.gene061427:intron | 35.0% |
| ! | TTAGAATTTTTCCTGGTGAG+AGG | - | chr7.1:75432102-75432121 | MS.gene061427:CDS | 35.0% |
| ! | TTATCAATCCCACTCTGAAA+TGG | + | chr7.1:75433569-75433588 | None:intergenic | 35.0% |
| ! | TTTGAAGTCTGCATCATCAA+AGG | - | chr7.1:75433015-75433034 | MS.gene061427:CDS | 35.0% |
| ! | TTTGTCTGCTTTGGATTCTA+GGG | - | chr7.1:75431839-75431858 | MS.gene061427:CDS | 35.0% |
| !! | ACCCTTGGTAATGATAACTT+AGG | + | chr7.1:75432308-75432327 | None:intergenic | 35.0% |
| !! | CCCTTGGTAATGATAACTTA+GGG | + | chr7.1:75432307-75432326 | None:intergenic | 35.0% |
| !! | CCTTGGTAATGATAACTTAG+GGG | + | chr7.1:75432306-75432325 | None:intergenic | 35.0% |
| !! | GCATTTGGTGCAAATCATTT+GGG | - | chr7.1:75433118-75433137 | MS.gene061427:CDS | 35.0% |
| !! | GTAGTTGGAGTATTTTAAGG+CGG | - | chr7.1:75432243-75432262 | MS.gene061427:CDS | 35.0% |
| !! | GTGTGTCCTGAGTATTTTAA+AGG | - | chr7.1:75431420-75431439 | MS.gene061427:intron | 35.0% |
| !! | TTGGATTGGTAAGTATTGTG+CGG | - | chr7.1:75431899-75431918 | MS.gene061427:CDS | 35.0% |
| !! | TTTTCTTTGGCTCCCAAAAT+AGG | - | chr7.1:75433531-75433550 | MS.gene061427:CDS | 35.0% |
| !!! | ATTTTTGGTTGGCCTTCTTT+TGG | - | chr7.1:75433837-75433856 | MS.gene061427:CDS | 35.0% |
| AAAACGAGAGAGGAAGAATC+TGG | + | chr7.1:75432500-75432519 | None:intergenic | 40.0% | |
| AAACGAGAGAGGAAGAATCT+GGG | + | chr7.1:75432499-75432518 | None:intergenic | 40.0% | |
| AAAGCGAGTTCCGATGATAT+CGG | - | chr7.1:75431087-75431106 | MS.gene061427:intron | 40.0% | |
| AAATTCCTGTCCTGATGTGA+AGG | - | chr7.1:75432268-75432287 | MS.gene061427:CDS | 40.0% | |
| AACAAAGAGCTTGGACTAAG+TGG | + | chr7.1:75431744-75431763 | None:intergenic | 40.0% | |
| AACTGGATGCTTCACATGTT+CGG | - | chr7.1:75433227-75433246 | MS.gene061427:CDS | 40.0% | |
| AATTTCACCGATCCGAATTC+CGG | - | chr7.1:75430919-75430938 | MS.gene061427:intron | 40.0% | |
| ACACAAGAAAAGGTTGCTGA+AGG | + | chr7.1:75434024-75434043 | None:intergenic | 40.0% | |
| ACTGTGGATATCTGTACAGT+TGG | + | chr7.1:75432603-75432622 | None:intergenic | 40.0% | |
| AGAAACAAAAGGAGGTGAAG+AGG | + | chr7.1:75432420-75432439 | None:intergenic | 40.0% | |
| AGTTGTTGCAGTGTCAGAAA+AGG | - | chr7.1:75431706-75431725 | MS.gene061427:CDS | 40.0% | |
| ATATCATCGGAACTCGCTTT+CGG | + | chr7.1:75431087-75431106 | None:intergenic | 40.0% | |
| ATATCTGTACAGTTGGACAC+TGG | + | chr7.1:75432596-75432615 | None:intergenic | 40.0% | |
| ATCAACTATTCCTTCCAGTC+GGG | - | chr7.1:75432769-75432788 | MS.gene061427:CDS | 40.0% | |
| ATCCAAACATATAACGCCGA+AGG | + | chr7.1:75431885-75431904 | None:intergenic | 40.0% | |
| ATCTTCGGAACAAGATGCAA+AGG | + | chr7.1:75431804-75431823 | None:intergenic | 40.0% | |
| ATGTTAGGGAAAAGAATGGG+AGG | - | chr7.1:75431532-75431551 | MS.gene061427:intron | 40.0% | |
| CACAAGAAAAGGTTGCTGAA+GGG | + | chr7.1:75434023-75434042 | None:intergenic | 40.0% | |
| CATCAACTATTCCTTCCAGT+CGG | - | chr7.1:75432768-75432787 | MS.gene061427:CDS | 40.0% | |
| CCACCATTATTCCTACTATC+AGG | + | chr7.1:75431252-75431271 | None:intergenic | 40.0% | |
| CCCCTAAGTTATCATTACCA+AGG | - | chr7.1:75432303-75432322 | MS.gene061427:CDS | 40.0% | |
| CCTCAACCCAAACTTACAAT+AGG | + | chr7.1:75433789-75433808 | None:intergenic | 40.0% | |
| CCTGATAGTAGGAATAATGG+TGG | - | chr7.1:75431249-75431268 | MS.gene061427:intron | 40.0% | |
| CTTATCTTATGTGGAGGGAA+GGG | - | chr7.1:75431607-75431626 | MS.gene061427:intron | 40.0% | |
| CTTGCATGCATATGTATGCT+TGG | + | chr7.1:75433172-75433191 | None:intergenic | 40.0% | |
| GAATCCAAAGCAGACAAAGA+CGG | + | chr7.1:75431837-75431856 | None:intergenic | 40.0% | |
| GAATCTGGAGAAACAAAAGG+AGG | + | chr7.1:75432428-75432447 | None:intergenic | 40.0% | |
| GAATTAAGCTTCATGCACTG+TGG | - | chr7.1:75434104-75434123 | MS.gene061427:CDS | 40.0% | |
| GAGGATGTTAGGGAAAAGAA+TGG | - | chr7.1:75431528-75431547 | MS.gene061427:intron | 40.0% | |
| GAGTCAGTTGACAACATTGA+CGG | + | chr7.1:75432383-75432402 | None:intergenic | 40.0% | |
| GATAGGGAGTTCTTTCAAAC+TGG | - | chr7.1:75433210-75433229 | MS.gene061427:CDS | 40.0% | |
| GCAGTTGACTGGAACAAAAT+TGG | - | chr7.1:75433283-75433302 | MS.gene061427:CDS | 40.0% | |
| GCTGAACATGTTTATCTTGG+TGG | - | chr7.1:75431324-75431343 | MS.gene061427:intron | 40.0% | |
| GGTATTGCTGATCCGAATAT+GGG | - | chr7.1:75431672-75431691 | MS.gene061427:intron | 40.0% | |
| GTGTGGAGTTATAAAGTGTG+AGG | + | chr7.1:75433385-75433404 | None:intergenic | 40.0% | |
| GTTACAAGATAGTCCTAGTG+AGG | - | chr7.1:75431467-75431486 | MS.gene061427:intron | 40.0% | |
| GTTGTTGCAGTGTCAGAAAA+GGG | - | chr7.1:75431707-75431726 | MS.gene061427:CDS | 40.0% | |
| TCATTCTCCGATGATGCAAA+CGG | + | chr7.1:75432194-75432213 | None:intergenic | 40.0% | |
| TCGGCGTTATATGTTTGGAT+TGG | - | chr7.1:75431885-75431904 | MS.gene061427:CDS | 40.0% | |
| TCTTGTTCCGAAGATGTTGA+CGG | - | chr7.1:75431809-75431828 | MS.gene061427:CDS | 40.0% | |
| TGACAAGCGAAACCCATATT+CGG | + | chr7.1:75431687-75431706 | None:intergenic | 40.0% | |
| TGTTAGGGAAAAGAATGGGA+GGG | - | chr7.1:75431533-75431552 | MS.gene061427:intron | 40.0% | |
| TTCCTTCGGCGTTATATGTT+TGG | - | chr7.1:75431880-75431899 | MS.gene061427:CDS | 40.0% | |
| ! | AGGTATTGCTGATCCGAATA+TGG | - | chr7.1:75431671-75431690 | MS.gene061427:intron | 40.0% |
| ! | AGTTTTCAGAAAAGCCATCG+TGG | - | chr7.1:75432154-75432173 | MS.gene061427:CDS | 40.0% |
| ! | CTGAACGCCAAAACATTTTC+CGG | + | chr7.1:75430843-75430862 | None:intergenic | 40.0% |
| ! | CTTTGTCTGCTTTGGATTCT+AGG | - | chr7.1:75431838-75431857 | MS.gene061427:CDS | 40.0% |
| ! | GATAGACAGCCTGATTTGAT+TGG | - | chr7.1:75433259-75433278 | MS.gene061427:CDS | 40.0% |
| ! | GTTTTCAGAAAAGCCATCGT+GGG | - | chr7.1:75432155-75432174 | MS.gene061427:CDS | 40.0% |
| ! | TAAGTATTGTGCGGCTATCA+TGG | - | chr7.1:75431908-75431927 | MS.gene061427:CDS | 40.0% |
| ! | TAGACAGCCTGATTTGATTG+GGG | - | chr7.1:75433261-75433280 | MS.gene061427:CDS | 40.0% |
| ! | TGAACGCCAAAACATTTTCC+GGG | + | chr7.1:75430842-75430861 | None:intergenic | 40.0% |
| ! | TGCAAATCATTTGGGTTCAG+AGG | - | chr7.1:75433126-75433145 | MS.gene061427:CDS | 40.0% |
| ! | TGCTTTTCAGTTTGTGAAGG+CGG | - | chr7.1:75431644-75431663 | MS.gene061427:intron | 40.0% |
| ! | TTGTCTGCTTTGGATTCTAG+GGG | - | chr7.1:75431840-75431859 | MS.gene061427:CDS | 40.0% |
| ! | TTTTCCGGGAATTTGAAAGG+TGG | + | chr7.1:75430828-75430847 | None:intergenic | 40.0% |
| !! | CCTATTGTAAGTTTGGGTTG+AGG | - | chr7.1:75433786-75433805 | MS.gene061427:CDS | 40.0% |
| !! | GGCATTTGGTGCAAATCATT+TGG | - | chr7.1:75433117-75433136 | MS.gene061427:CDS | 40.0% |
| AAACTCCTTCACATCAGGAC+AGG | + | chr7.1:75432276-75432295 | None:intergenic | 45.0% | |
| AACCACCTATTACTCCTGGT+GGG | - | chr7.1:75431121-75431140 | MS.gene061427:intron | 45.0% | |
| AACGAGAGAGGAAGAATCTG+GGG | + | chr7.1:75432498-75432517 | None:intergenic | 45.0% | |
| AAGCGAGTTCCGATGATATC+GGG | - | chr7.1:75431088-75431107 | MS.gene061427:intron | 45.0% | |
| AAGGTCACAGCAGAATTGCA+AGG | - | chr7.1:75430996-75431015 | MS.gene061427:intron | 45.0% | |
| ACAATGAACTCAGCAGAGCA+AGG | + | chr7.1:75434215-75434234 | None:intergenic | 45.0% | |
| ACACAGTTCCTGAGAACTGA+TGG | + | chr7.1:75432962-75432981 | None:intergenic | 45.0% | |
| ACTCTCTCTTGCAGGAAGAT+GGG | + | chr7.1:75432225-75432244 | None:intergenic | 45.0% | |
| ATCATGGAAAGGGATGCTAG+AGG | - | chr7.1:75431924-75431943 | MS.gene061427:CDS | 45.0% | |
| ATCCTTGCACTCTCTCATAC+CGG | + | chr7.1:75431968-75431987 | None:intergenic | 45.0% | |
| ATTGTGCGGCTATCATGGAA+AGG | - | chr7.1:75431913-75431932 | MS.gene061427:CDS | 45.0% | |
| ATTTGATTGGGGCAGTTGAC+TGG | - | chr7.1:75433272-75433291 | MS.gene061427:CDS | 45.0% | |
| CATGCCACCTTTCAAATTCC+CGG | - | chr7.1:75430821-75430840 | MS.gene061427:CDS | 45.0% | |
| CGACTGGAAGGAATAGTTGA+TGG | + | chr7.1:75432770-75432789 | None:intergenic | 45.0% | |
| CGTTCAGCAATGGAAGTTGA+TGG | + | chr7.1:75432680-75432699 | None:intergenic | 45.0% | |
| GAAATTCGATTCCGGTTCAC+CGG | + | chr7.1:75430905-75430924 | None:intergenic | 45.0% | |
| GAGAGAAACTCCTTCACATC+AGG | + | chr7.1:75432281-75432300 | None:intergenic | 45.0% | |
| GCAATGAACCATCAGTTCTC+AGG | - | chr7.1:75432951-75432970 | MS.gene061427:CDS | 45.0% | |
| GCAGATCGAGAACATAGATG+TGG | + | chr7.1:75432638-75432657 | None:intergenic | 45.0% | |
| GCTTATCTTATGTGGAGGGA+AGG | - | chr7.1:75431606-75431625 | MS.gene061427:intron | 45.0% | |
| GGATCGGTGAAATTCGATTC+CGG | + | chr7.1:75430913-75430932 | None:intergenic | 45.0% | |
| GTTGACAACATTGACGGTGA+TGG | + | chr7.1:75432377-75432396 | None:intergenic | 45.0% | |
| TACTCTCTCTTGCAGGAAGA+TGG | + | chr7.1:75432226-75432245 | None:intergenic | 45.0% | |
| TCAAAGGGAGATTACGAGAG+TGG | - | chr7.1:75433031-75433050 | MS.gene061427:CDS | 45.0% | |
| TCAACTGCCCCAATCAAATC+AGG | + | chr7.1:75433271-75433290 | None:intergenic | 45.0% | |
| TCATGGAAAGGGATGCTAGA+GGG | - | chr7.1:75431925-75431944 | MS.gene061427:CDS | 45.0% | |
| TCGAGAATGGTGTTTGTGTC+TGG | - | chr7.1:75433742-75433761 | MS.gene061427:CDS | 45.0% | |
| TTCCTGCAAGAGAGAGTAGT+TGG | - | chr7.1:75432228-75432247 | MS.gene061427:CDS | 45.0% | |
| TTGCAATTCTGCTGTGACCT+TGG | + | chr7.1:75430997-75431016 | None:intergenic | 45.0% | |
| TTGTGCGGCTATCATGGAAA+GGG | - | chr7.1:75431914-75431933 | MS.gene061427:CDS | 45.0% | |
| ! | AAAGCATCCCAAAACGAACG+TGG | + | chr7.1:75432020-75432039 | None:intergenic | 45.0% |
| ! | ACCTTGGTGACTGTATTGTG+CGG | + | chr7.1:75433337-75433356 | None:intergenic | 45.0% |
| ! | GTGGTGGAGATAATACCAAC+CGG | - | chr7.1:75430947-75430966 | MS.gene061427:intron | 45.0% |
| ! | GTGTTTGTCAGTGTCGAGAA+TGG | - | chr7.1:75433729-75433748 | MS.gene061427:CDS | 45.0% |
| ! | TGAGGAACCACGTTCGTTTT+GGG | - | chr7.1:75432010-75432029 | MS.gene061427:CDS | 45.0% |
| ! | TGCCTTTGATGGACATGTCT+GGG | - | chr7.1:75432051-75432070 | MS.gene061427:CDS | 45.0% |
| ! | TTGCCTTTGATGGACATGTC+TGG | - | chr7.1:75432050-75432069 | MS.gene061427:CDS | 45.0% |
| ! | TTTTCCTGGTGAGAGGAAAG+TGG | - | chr7.1:75432109-75432128 | MS.gene061427:CDS | 45.0% |
| !!! | TGTTTTGGCGTTCAGCTTCA+TGG | - | chr7.1:75430848-75430867 | MS.gene061427:intron | 45.0% |
| !! | AGAAATAAAATATAAAATAA+TGG | + | chr7.1:75433699-75433718 | None:intergenic | 5.0% |
| AAAGGATCATACGGCGAGTG+AGG | + | chr7.1:75431786-75431805 | None:intergenic | 50.0% | |
| AAGAACACCATGTTCCCGAC+TGG | + | chr7.1:75432786-75432805 | None:intergenic | 50.0% | |
| ACTACCTCTGCGTTCAGCAA+TGG | + | chr7.1:75432690-75432709 | None:intergenic | 50.0% | |
| ACTTCCATTGCTGAACGCAG+AGG | - | chr7.1:75432683-75432702 | MS.gene061427:CDS | 50.0% | |
| AGCAATCGAAAGCGGCTGAA+GGG | + | chr7.1:75431043-75431062 | None:intergenic | 50.0% | |
| AGCAGAGCAAGGAACTCTTG+TGG | + | chr7.1:75434204-75434223 | None:intergenic | 50.0% | |
| AGCGAGTTCCGATGATATCG+GGG | - | chr7.1:75431089-75431108 | MS.gene061427:intron | 50.0% | |
| ATTATCTCCACCACCACTGC+CGG | + | chr7.1:75430941-75430960 | None:intergenic | 50.0% | |
| ATTCCTTCCAGTCGGGAACA+TGG | - | chr7.1:75432776-75432795 | MS.gene061427:CDS | 50.0% | |
| CAACCACCTATTACTCCTGG+TGG | - | chr7.1:75431120-75431139 | MS.gene061427:intron | 50.0% | |
| CATGGAAAGGGATGCTAGAG+GGG | - | chr7.1:75431926-75431945 | MS.gene061427:CDS | 50.0% | |
| CCACAACCACCTATTACTCC+TGG | - | chr7.1:75431117-75431136 | MS.gene061427:intron | 50.0% | |
| CCAGGAGTAATAGGTGGTTG+TGG | + | chr7.1:75431120-75431139 | None:intergenic | 50.0% | |
| CGGGAATTTGAAAGGTGGCA+TGG | + | chr7.1:75430823-75430842 | None:intergenic | 50.0% | |
| CTCCAACTACTCTCTCTTGC+AGG | + | chr7.1:75432233-75432252 | None:intergenic | 50.0% | |
| CTCCCAGACATGTCCATCAA+AGG | + | chr7.1:75432056-75432075 | None:intergenic | 50.0% | |
| GACGGATCCGTCAACATCTT+CGG | + | chr7.1:75431819-75431838 | None:intergenic | 50.0% | |
| GACGGGAGTAAAAACGAGAG+AGG | + | chr7.1:75432510-75432529 | None:intergenic | 50.0% | |
| GCAATGTCTGGACATGAAGC+TGG | + | chr7.1:75432917-75432936 | None:intergenic | 50.0% | |
| GGATCCGTCTTTGTCTGCTT+TGG | - | chr7.1:75431830-75431849 | MS.gene061427:CDS | 50.0% | |
| GTGGCGATAACTTGACACTG+TGG | + | chr7.1:75432619-75432638 | None:intergenic | 50.0% | |
| TCGGCCACTCATCTAAACTC+CGG | + | chr7.1:75431068-75431087 | None:intergenic | 50.0% | |
| TGTCAGACATGTGTCGTCAC+CGG | - | chr7.1:75433663-75433682 | MS.gene061427:CDS | 50.0% | |
| TGTGCCTCCGTTTGCATCAT+CGG | - | chr7.1:75432184-75432203 | MS.gene061427:CDS | 50.0% | |
| TTACCATTACCTCTCCCACC+AGG | + | chr7.1:75431138-75431157 | None:intergenic | 50.0% | |
| TTCAGAAAAGCCATCGTGGG+AGG | - | chr7.1:75432158-75432177 | MS.gene061427:CDS | 50.0% | |
| TTCTCCGATGATGCAAACGG+AGG | + | chr7.1:75432191-75432210 | None:intergenic | 50.0% | |
| ! | CCAGACATTGCTGATAGCGT+GGG | - | chr7.1:75432926-75432945 | MS.gene061427:CDS | 50.0% |
| ! | GTGAGGAACCACGTTCGTTT+TGG | - | chr7.1:75432009-75432028 | MS.gene061427:CDS | 50.0% |
| ! | TCCAGACATTGCTGATAGCG+TGG | - | chr7.1:75432925-75432944 | MS.gene061427:CDS | 50.0% |
| !! | ATTGTTGTCAAGGGGTGTCG+AGG | - | chr7.1:75431565-75431584 | MS.gene061427:intron | 50.0% |
| AAGGCGGTGGAGGAAATCTC+CGG | + | chr7.1:75430969-75430988 | None:intergenic | 55.0% | |
| ACACCATGTTCCCGACTGGA+AGG | + | chr7.1:75432782-75432801 | None:intergenic | 55.0% | |
| ACCACTGCCGGAATTCGGAT+CGG | + | chr7.1:75430929-75430948 | None:intergenic | 55.0% | |
| ACTCCTGGTGGGAGAGGTAA+TGG | - | chr7.1:75431132-75431151 | MS.gene061427:intron | 55.0% | |
| AGGCACAAAACCTCCCACGA+TGG | + | chr7.1:75432171-75432190 | None:intergenic | 55.0% | |
| CCCACGCTATCAGCAATGTC+TGG | + | chr7.1:75432929-75432948 | None:intergenic | 55.0% | |
| CCTATTACTCCTGGTGGGAG+AGG | - | chr7.1:75431126-75431145 | MS.gene061427:intron | 55.0% | |
| CCTCTCCCACCAGGAGTAAT+AGG | + | chr7.1:75431129-75431148 | None:intergenic | 55.0% | |
| CGCAAATCCTTCCGGTGAAC+CGG | - | chr7.1:75430891-75430910 | MS.gene061427:intron | 55.0% | |
| CGGTTCACCGGAAGGATTTG+CGG | + | chr7.1:75430893-75430912 | None:intergenic | 55.0% | |
| CTCCCACCAGGAGTAATAGG+TGG | + | chr7.1:75431126-75431145 | None:intergenic | 55.0% | |
| CTCGCCGGAGTTTAGATGAG+TGG | - | chr7.1:75431061-75431080 | MS.gene061427:intron | 55.0% | |
| GAGCAATCGAAAGCGGCTGA+AGG | + | chr7.1:75431044-75431063 | None:intergenic | 55.0% | |
| GCAATCGAAAGCGGCTGAAG+GGG | + | chr7.1:75431042-75431061 | None:intergenic | 55.0% | |
| GCATCCACTTTCCTCTCACC+AGG | + | chr7.1:75432116-75432135 | None:intergenic | 55.0% | |
| GCCGCACAATACAGTCACCA+AGG | - | chr7.1:75433333-75433352 | MS.gene061427:CDS | 55.0% | |
| GTTCCGATGATATCGGGGAG+TGG | - | chr7.1:75431094-75431113 | MS.gene061427:intron | 55.0% | |
| TGCTGTGACCTTGGCGTCAA+AGG | + | chr7.1:75430988-75431007 | None:intergenic | 55.0% | |
| TGGCCACTCCCCGATATCAT+CGG | + | chr7.1:75431100-75431119 | None:intergenic | 55.0% | |
| TGTGACCTTGGCGTCAAAGG+CGG | + | chr7.1:75430985-75431004 | None:intergenic | 55.0% | |
| TTCACCGGAAGGATTTGCGG+CGG | + | chr7.1:75430890-75430909 | None:intergenic | 55.0% | |
| TTCGATTCCGGTTCACCGGA+AGG | + | chr7.1:75430901-75430920 | None:intergenic | 55.0% | |
| ! | GTCCGGTATGAGAGAGTGCA+AGG | - | chr7.1:75431963-75431982 | MS.gene061427:CDS | 55.0% |
| AAGGATTTGCGGCGGCGGAA+CGG | + | chr7.1:75430882-75430901 | None:intergenic | 60.0% | |
| AAGGGATGCTAGAGGGGCTG+CGG | - | chr7.1:75431932-75431951 | MS.gene061427:CDS | 60.0% | |
| ACCGATCCGAATTCCGGCAG+TGG | - | chr7.1:75430925-75430944 | MS.gene061427:intron | 60.0% | |
| ATCGAAAGCGGCTGAAGGGG+CGG | + | chr7.1:75431039-75431058 | None:intergenic | 60.0% | |
| CAGTTTGTGAAGGCGGCGAG+AGG | - | chr7.1:75431651-75431670 | MS.gene061427:intron | 60.0% | |
| CCACCACCACTGCCGGAATT+CGG | + | chr7.1:75430934-75430953 | None:intergenic | 60.0% | |
| CGGTGGAGGAAATCTCCGGT+TGG | + | chr7.1:75430965-75430984 | None:intergenic | 60.0% | |
| CTCCGGCGAGCAATCGAAAG+CGG | + | chr7.1:75431051-75431070 | None:intergenic | 60.0% | |
| GATCCGAATTCCGGCAGTGG+TGG | - | chr7.1:75430928-75430947 | MS.gene061427:intron | 60.0% | |
| GGGCTGCGGATCAGATTGTC+CGG | - | chr7.1:75431946-75431965 | MS.gene061427:CDS | 60.0% | |
| ! | AGCCGCTTTCGATTGCTCGC+CGG | - | chr7.1:75431046-75431065 | MS.gene061427:intron | 60.0% |
| ACCGGAAGGATTTGCGGCGG+CGG | + | chr7.1:75430887-75430906 | None:intergenic | 65.0% | |
| AGGATTTGCGGCGGCGGAAC+GGG | + | chr7.1:75430881-75430900 | None:intergenic | 65.0% | |
| CCGAATTCCGGCAGTGGTGG+TGG | - | chr7.1:75430931-75430950 | MS.gene061427:intron | 65.0% | |
| CTCCACCGCCTTTGACGCCA+AGG | - | chr7.1:75430977-75430996 | MS.gene061427:intron | 65.0% | |
| CTTGGCGTCAAAGGCGGTGG+AGG | + | chr7.1:75430979-75430998 | None:intergenic | 65.0% | |
| GACCTTGGCGTCAAAGGCGG+TGG | + | chr7.1:75430982-75431001 | None:intergenic | 65.0% | |
| TCCGCCGCCGCAAATCCTTC+CGG | - | chr7.1:75430883-75430902 | MS.gene061427:intron | 65.0% | |
| ATTTGCGGCGGCGGAACGGG+CGG | + | chr7.1:75430878-75430897 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 75430793 | 75434236 | 75430793 | ID=MS.gene061427 |
| chr7.1 | mRNA | 75430793 | 75434236 | 75430793 | ID=MS.gene061427.t1;Parent=MS.gene061427 |
| chr7.1 | exon | 75431675 | 75434236 | 75431675 | ID=MS.gene061427.t1.exon1;Parent=MS.gene061427.t1 |
| chr7.1 | CDS | 75431675 | 75434236 | 75431675 | ID=cds.MS.gene061427.t1;Parent=MS.gene061427.t1 |
| chr7.1 | exon | 75430793 | 75430849 | 75430793 | ID=MS.gene061427.t1.exon2;Parent=MS.gene061427.t1 |
| chr7.1 | CDS | 75430793 | 75430849 | 75430793 | ID=cds.MS.gene061427.t1;Parent=MS.gene061427.t1 |
| Gene Sequence |
| Protein sequence |
