Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057919.t1 | XP_013459058.1 | 90.3 | 514 | 48 | 2 | 1 | 512 | 1 | 514 | 9.20E-256 | 892.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057919.t1 | Q9LDD4 | 40.3 | 191 | 93 | 6 | 144 | 329 | 370 | 544 | 4.8e-27 | 124.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057919.t1 | A0A072UUQ4 | 90.3 | 514 | 48 | 2 | 1 | 512 | 1 | 514 | 6.6e-256 | 892.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene057919 | 0.820798 | 5.67E-53 | -1.69E-46 |
| MS.gene050556 | MS.gene057919 | 0.829234 | 5.77E-55 | -1.69E-46 |
| MS.gene050646 | MS.gene057919 | 0.824972 | 6.04E-54 | -1.69E-46 |
| MS.gene050654 | MS.gene057919 | 0.811558 | 6.59E-51 | -1.69E-46 |
| MS.gene051902 | MS.gene057919 | 0.801547 | 8.55E-49 | -1.69E-46 |
| MS.gene052016 | MS.gene057919 | 0.805687 | 1.18E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene057919 | 0.814305 | 1.65E-51 | -1.69E-46 |
| MS.gene052609 | MS.gene057919 | 0.811568 | 6.56E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene057919 | 0.8024 | 5.71E-49 | -1.69E-46 |
| MS.gene053620 | MS.gene057919 | 0.824473 | 7.92E-54 | -1.69E-46 |
| MS.gene054178 | MS.gene057919 | 0.812313 | 4.51E-51 | -1.69E-46 |
| MS.gene054892 | MS.gene057919 | 0.805235 | 1.47E-49 | -1.69E-46 |
| MS.gene054893 | MS.gene057919 | 0.802589 | 5.22E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene057919 | 0.800144 | 1.65E-48 | -1.69E-46 |
| MS.gene056045 | MS.gene057919 | 0.805356 | 1.39E-49 | -1.69E-46 |
| MS.gene056973 | MS.gene057919 | 0.810561 | 1.08E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene058638 | 0.805311 | 1.42E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene058639 | 0.812534 | 4.04E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene059170 | 0.809457 | 1.87E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene060933 | 0.804612 | 1.99E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene060937 | 0.803225 | 3.86E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene061100 | 0.82892 | 6.87E-55 | -1.69E-46 |
| MS.gene057919 | MS.gene061427 | 0.809977 | 1.45E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene061707 | 0.825909 | 3.62E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene062362 | 0.803738 | 3.02E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene064243 | 0.819753 | 9.84E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene064969 | 0.813006 | 3.18E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene065055 | 0.801593 | 8.37E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene065593 | 0.831135 | 1.98E-55 | -1.69E-46 |
| MS.gene057919 | MS.gene066718 | 0.805628 | 1.22E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene067410 | 0.801345 | 9.41E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene068327 | 0.805258 | 1.46E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene068941 | 0.807825 | 4.18E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene069415 | 0.806871 | 6.66E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene06998 | 0.840996 | 6.21E-58 | -1.69E-46 |
| MS.gene057919 | MS.gene070918 | 0.830476 | 2.87E-55 | -1.69E-46 |
| MS.gene057919 | MS.gene071918 | 0.824233 | 9.02E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene072685 | 0.80387 | 2.84E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene072762 | 0.829928 | 3.91E-55 | -1.69E-46 |
| MS.gene057919 | MS.gene072873 | 0.819846 | 9.37E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene073390 | 0.812131 | 4.95E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene074381 | 0.806347 | 8.60E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene07878 | 0.802739 | 4.86E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene09600 | 0.808449 | 3.08E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene09980 | 0.81492 | 1.20E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene20077 | 0.834431 | 3.01E-56 | -1.69E-46 |
| MS.gene057919 | MS.gene20298 | 0.801539 | 8.59E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene20554 | 0.829961 | 3.84E-55 | -1.69E-46 |
| MS.gene057919 | MS.gene20985 | 0.801193 | 1.01E-48 | -1.69E-46 |
| MS.gene057919 | MS.gene21056 | 0.805687 | 1.18E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene21632 | 0.811162 | 8.04E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene21651 | 0.800134 | 1.66E-48 | -1.69E-46 |
| MS.gene057919 | MS.gene21680 | 0.803266 | 3.78E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene21770 | 0.817341 | 3.47E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene21826 | 0.81073 | 9.97E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene22288 | 0.825972 | 3.50E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene22419 | 0.822132 | 2.79E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene22790 | 0.800063 | 1.72E-48 | -1.69E-46 |
| MS.gene057919 | MS.gene22793 | 0.803684 | 3.10E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene22877 | 0.821451 | 4.01E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene24375 | 0.825429 | 4.71E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene24903 | 0.814934 | 1.20E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene24978 | -0.806654 | 7.40E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene25928 | 0.807479 | 4.95E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene26396 | 0.809687 | 1.67E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene27401 | 0.821153 | 4.70E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene27997 | 0.812602 | 3.90E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene28454 | 0.803532 | 3.33E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene28611 | 0.835748 | 1.40E-56 | -1.69E-46 |
| MS.gene057919 | MS.gene28820 | 0.807139 | 5.85E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene29036 | 0.813962 | 1.96E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene29041 | 0.80387 | 2.84E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene29096 | 0.815211 | 1.04E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene29233 | 0.832903 | 7.25E-56 | -1.69E-46 |
| MS.gene057919 | MS.gene31466 | 0.80866 | 2.78E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene31648 | 0.804344 | 2.26E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene31904 | 0.808073 | 3.70E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene32579 | 0.816105 | 6.56E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene32636 | 0.802219 | 6.22E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene32688 | 0.836884 | 7.20E-57 | -1.69E-46 |
| MS.gene057919 | MS.gene33135 | 0.823005 | 1.75E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene33177 | 0.80238 | 5.77E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene34076 | 0.827752 | 1.32E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene34078 | 0.821443 | 4.03E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene34515 | 0.814336 | 1.62E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene34937 | 0.821172 | 4.65E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene36289 | 0.853773 | 1.91E-61 | -1.69E-46 |
| MS.gene057919 | MS.gene38542 | 0.806819 | 6.83E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene39046 | 0.845868 | 3.11E-59 | -1.69E-46 |
| MS.gene057919 | MS.gene39074 | 0.819294 | 1.25E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene39529 | 0.816122 | 6.51E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene40087 | 0.804285 | 2.32E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene40093 | 0.853173 | 2.85E-61 | -1.69E-46 |
| MS.gene057919 | MS.gene40330 | 0.831691 | 1.45E-55 | -1.69E-46 |
| MS.gene057919 | MS.gene40748 | 0.805107 | 1.57E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene42528 | 0.819166 | 1.34E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene42653 | 0.830375 | 3.04E-55 | -1.69E-46 |
| MS.gene057919 | MS.gene43202 | 0.816535 | 5.26E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene43381 | 0.808238 | 3.42E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene43838 | 0.804599 | 2.00E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene44621 | 0.806365 | 8.52E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene44969 | 0.812882 | 3.39E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene45172 | 0.858749 | 6.65E-63 | -1.69E-46 |
| MS.gene057919 | MS.gene45281 | 0.835545 | 1.58E-56 | -1.69E-46 |
| MS.gene057919 | MS.gene47581 | 0.824779 | 6.71E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene47695 | 0.807984 | 3.87E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene47967 | 0.817434 | 3.30E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene48526 | 0.817339 | 3.47E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene49467 | 0.82393 | 1.06E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene49664 | 0.812132 | 4.94E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene51029 | 0.802598 | 5.20E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene51233 | 0.820224 | 7.68E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene51384 | 0.812547 | 4.01E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene51664 | 0.82448 | 7.89E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene51789 | 0.804432 | 2.17E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene51985 | 0.837836 | 4.11E-57 | -1.69E-46 |
| MS.gene057919 | MS.gene53612 | 0.805976 | 1.03E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene53825 | 0.805297 | 1.43E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene54045 | 0.810254 | 1.26E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene56039 | 0.806989 | 6.29E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene56339 | 0.826046 | 3.36E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene56476 | 0.804136 | 2.50E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene56742 | 0.850793 | 1.35E-60 | -1.69E-46 |
| MS.gene057919 | MS.gene57028 | 0.800582 | 1.35E-48 | -1.69E-46 |
| MS.gene057919 | MS.gene57360 | 0.832199 | 1.08E-55 | -1.69E-46 |
| MS.gene057919 | MS.gene57576 | 0.82394 | 1.06E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene57783 | 0.801471 | 8.87E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene57980 | 0.808706 | 2.71E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene58134 | 0.816002 | 6.92E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene58193 | 0.820399 | 7.00E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene58284 | 0.81481 | 1.27E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene58571 | 0.869426 | 3.12E-66 | -1.69E-46 |
| MS.gene057919 | MS.gene58627 | 0.800973 | 1.12E-48 | -1.69E-46 |
| MS.gene057919 | MS.gene58919 | 0.800551 | 1.37E-48 | -1.69E-46 |
| MS.gene057919 | MS.gene59241 | 0.809236 | 2.09E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene59242 | 0.808469 | 3.05E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene59366 | 0.841133 | 5.71E-58 | -1.69E-46 |
| MS.gene057919 | MS.gene59499 | 0.814869 | 1.24E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene59697 | 0.803564 | 3.28E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene60150 | 0.800842 | 1.19E-48 | -1.69E-46 |
| MS.gene057919 | MS.gene60399 | 0.81066 | 1.03E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene61644 | 0.847686 | 9.88E-60 | -1.69E-46 |
| MS.gene057919 | MS.gene62924 | 0.81434 | 1.62E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene63530 | 0.809311 | 2.01E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene63621 | 0.814961 | 1.18E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene63930 | 0.82581 | 3.83E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene63961 | 0.811593 | 6.48E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene64284 | 0.823519 | 1.33E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene64800 | 0.816381 | 5.69E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene67067 | 0.806851 | 6.73E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene67099 | 0.803395 | 3.56E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene67881 | 0.815482 | 9.04E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene68653 | 0.805913 | 1.06E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene68654 | 0.804243 | 2.37E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene68713 | 0.80739 | 5.17E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene69692 | 0.801935 | 7.12E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene71202 | 0.819498 | 1.13E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene71785 | 0.819572 | 1.08E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene74275 | 0.800074 | 1.71E-48 | -1.69E-46 |
| MS.gene057919 | MS.gene74537 | 0.813283 | 2.77E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene74932 | 0.828065 | 1.11E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene74956 | 0.801658 | 8.12E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene74972 | 0.824172 | 9.32E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene75413 | 0.82664 | 2.43E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene75941 | 0.827613 | 1.42E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene79120 | 0.811595 | 6.47E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene80094 | 0.804886 | 1.74E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene80201 | 0.832706 | 8.11E-56 | -1.69E-46 |
| MS.gene057919 | MS.gene80237 | 0.821073 | 4.90E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene80557 | 0.827061 | 1.93E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene82555 | 0.802181 | 6.34E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene82742 | -0.800356 | 1.50E-48 | -1.69E-46 |
| MS.gene057919 | MS.gene82806 | 0.808477 | 3.04E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene84498 | 0.824104 | 9.67E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene84840 | 0.803218 | 3.87E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene85281 | 0.809885 | 1.52E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene86038 | 0.802186 | 6.32E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene86267 | 0.820922 | 5.31E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene86826 | 0.800162 | 1.64E-48 | -1.69E-46 |
| MS.gene057919 | MS.gene87358 | 0.817273 | 3.59E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene88032 | 0.804418 | 2.18E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene88147 | 0.818363 | 2.04E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene88649 | 0.827027 | 1.96E-54 | -1.69E-46 |
| MS.gene057919 | MS.gene88658 | 0.812108 | 5.00E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene89104 | 0.830639 | 2.62E-55 | -1.69E-46 |
| MS.gene057919 | MS.gene89154 | 0.806616 | 7.54E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene89368 | 0.817558 | 3.10E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene89369 | 0.837545 | 4.88E-57 | -1.69E-46 |
| MS.gene057919 | MS.gene89812 | 0.811731 | 6.04E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene89985 | 0.814003 | 1.92E-51 | -1.69E-46 |
| MS.gene057919 | MS.gene90260 | 0.842734 | 2.16E-58 | -1.69E-46 |
| MS.gene057919 | MS.gene90263 | 0.83557 | 1.55E-56 | -1.69E-46 |
| MS.gene057919 | MS.gene90604 | 0.828418 | 9.09E-55 | -1.69E-46 |
| MS.gene057919 | MS.gene91416 | 0.807849 | 4.13E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene93728 | 0.819367 | 1.21E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene94615 | 0.805042 | 1.62E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene94674 | 0.817286 | 3.57E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene95157 | -0.816192 | 6.28E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene95204 | 0.840934 | 6.45E-58 | -1.69E-46 |
| MS.gene057919 | MS.gene95712 | 0.806665 | 7.37E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene96289 | 0.802061 | 6.71E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene96351 | 0.810498 | 1.12E-50 | -1.69E-46 |
| MS.gene057919 | MS.gene96353 | 0.843988 | 9.98E-59 | -1.69E-46 |
| MS.gene057919 | MS.gene96510 | 0.817503 | 3.19E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene96992 | 0.816323 | 5.87E-52 | -1.69E-46 |
| MS.gene057919 | MS.gene97459 | 0.804404 | 2.20E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene98721 | 0.801396 | 9.18E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene99525 | 0.812775 | 3.58E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene057919 | MS.gene95204 | PPI |
| MS.gene51814 | MS.gene057919 | PPI |
| MS.gene50873 | MS.gene057919 | PPI |
| MS.gene95204 | MS.gene057919 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057919.t1 | MTR_3g023780 | 94.553 | 514 | 26 | 2 | 1 | 512 | 1 | 514 | 0.0 | 977 |
| MS.gene057919.t1 | MTR_7g078120 | 38.624 | 189 | 103 | 4 | 139 | 325 | 378 | 555 | 1.57e-31 | 128 |
| MS.gene057919.t1 | MTR_7g078120 | 38.624 | 189 | 103 | 4 | 139 | 325 | 378 | 555 | 2.16e-31 | 128 |
| MS.gene057919.t1 | MTR_1g073380 | 38.191 | 199 | 106 | 5 | 131 | 325 | 378 | 563 | 2.25e-26 | 113 |
| MS.gene057919.t1 | MTR_8g098645 | 40.217 | 184 | 93 | 6 | 146 | 325 | 141 | 311 | 4.64e-26 | 109 |
| MS.gene057919.t1 | MTR_8g098635 | 36.598 | 194 | 104 | 6 | 138 | 325 | 82 | 262 | 1.54e-25 | 107 |
| MS.gene057919.t1 | MTR_1g073530 | 37.912 | 182 | 96 | 5 | 148 | 325 | 385 | 553 | 1.87e-25 | 110 |
| MS.gene057919.t1 | MTR_1g073590 | 37.912 | 182 | 96 | 5 | 148 | 325 | 382 | 550 | 1.95e-25 | 110 |
| MS.gene057919.t1 | MTR_8g098605 | 39.130 | 184 | 95 | 5 | 146 | 325 | 391 | 561 | 7.12e-25 | 108 |
| MS.gene057919.t1 | MTR_8g098635 | 36.598 | 194 | 104 | 6 | 138 | 325 | 165 | 345 | 9.07e-25 | 106 |
| MS.gene057919.t1 | MTR_8g028905 | 35.326 | 184 | 102 | 7 | 148 | 325 | 408 | 580 | 1.81e-22 | 101 |
| MS.gene057919.t1 | MTR_7g066890 | 32.778 | 180 | 114 | 5 | 142 | 320 | 188 | 361 | 6.87e-19 | 88.6 |
| MS.gene057919.t1 | MTR_7g066890 | 32.778 | 180 | 114 | 5 | 142 | 320 | 290 | 463 | 2.06e-18 | 88.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057919.t1 | AT1G13880 | 37.260 | 365 | 206 | 8 | 1 | 365 | 1 | 342 | 1.86e-65 | 218 |
| MS.gene057919.t1 | AT1G13880 | 37.260 | 365 | 206 | 8 | 1 | 365 | 11 | 352 | 2.97e-65 | 218 |
| MS.gene057919.t1 | AT1G13880 | 36.986 | 365 | 208 | 8 | 1 | 365 | 1 | 343 | 3.49e-65 | 218 |
| MS.gene057919.t1 | AT2G03470 | 36.061 | 330 | 176 | 6 | 1 | 327 | 1 | 298 | 2.30e-61 | 208 |
| MS.gene057919.t1 | AT1G26580 | 43.426 | 251 | 130 | 4 | 113 | 351 | 33 | 283 | 3.63e-61 | 207 |
| MS.gene057919.t1 | AT1G26580 | 36.685 | 368 | 197 | 9 | 1 | 351 | 1 | 349 | 8.33e-61 | 207 |
| MS.gene057919.t1 | AT1G26580 | 36.685 | 368 | 197 | 9 | 1 | 351 | 1 | 349 | 8.33e-61 | 207 |
| MS.gene057919.t1 | AT2G03470 | 49.231 | 195 | 95 | 1 | 133 | 327 | 107 | 297 | 1.66e-60 | 206 |
| MS.gene057919.t1 | AT4G11400 | 40.314 | 191 | 93 | 6 | 144 | 329 | 370 | 544 | 2.12e-29 | 122 |
| MS.gene057919.t1 | AT4G11400 | 40.314 | 191 | 93 | 6 | 144 | 329 | 370 | 544 | 2.12e-29 | 122 |
| MS.gene057919.t1 | AT5G04110 | 31.868 | 182 | 115 | 4 | 145 | 324 | 359 | 533 | 9.17e-24 | 105 |
| MS.gene057919.t1 | AT5G04110 | 31.868 | 182 | 115 | 4 | 145 | 324 | 358 | 532 | 1.00e-23 | 105 |
| MS.gene057919.t1 | AT5G04110 | 31.868 | 182 | 115 | 4 | 145 | 324 | 358 | 532 | 1.00e-23 | 105 |
| MS.gene057919.t1 | AT2G46040 | 34.807 | 181 | 101 | 5 | 150 | 325 | 362 | 530 | 1.95e-16 | 82.8 |
| MS.gene057919.t1 | AT2G46040 | 34.807 | 181 | 101 | 5 | 150 | 325 | 362 | 530 | 1.95e-16 | 82.8 |
| MS.gene057919.t1 | AT2G46040 | 34.807 | 181 | 101 | 5 | 150 | 325 | 376 | 544 | 2.44e-16 | 82.4 |
| MS.gene057919.t1 | AT5G04110 | 30.405 | 148 | 100 | 3 | 145 | 290 | 358 | 504 | 1.32e-15 | 79.7 |
Find 133 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATAGGTATTCCTGCTTCT+TGG | 0.194217 | 3.3:-15051518 | MS.gene057919:CDS |
| CGCTGGGACCTGCATGTTTC+GGG | 0.207717 | 3.3:+15051828 | None:intergenic |
| ACTGAAGTACTCATGGAAAA+AGG | 0.244769 | 3.3:+15051440 | None:intergenic |
| CATCCCTCAACAAGAATTTC+TGG | 0.247523 | 3.3:-15050942 | MS.gene057919:CDS |
| ATTGAGAAATTCATTGAATT+GGG | 0.268674 | 3.3:-15051051 | MS.gene057919:CDS |
| CTCATGAGTTAATGTCCTTA+TGG | 0.270357 | 3.3:+15051383 | None:intergenic |
| CTGAAATATATTGGCCGTTC+TGG | 0.274949 | 3.3:+15051417 | None:intergenic |
| TTCATTGAATTGGGGTTTGC+TGG | 0.296184 | 3.3:-15051042 | MS.gene057919:CDS |
| TATCACTATCAGCACTTAAT+AGG | 0.298492 | 3.3:+15050815 | None:intergenic |
| TCGCTGGGACCTGCATGTTT+CGG | 0.298552 | 3.3:+15051827 | None:intergenic |
| GATGAAAATTGTGATGTTAA+TGG | 0.303115 | 3.3:-15050637 | MS.gene057919:CDS |
| CATCCCAAACATGTTGGTCC+TGG | 0.308074 | 3.3:+15050518 | None:intergenic |
| CAGATTCAAACCTCAATGTT+TGG | 0.315295 | 3.3:-15051263 | MS.gene057919:CDS |
| GATTGAGAAATTCATTGAAT+TGG | 0.317579 | 3.3:-15051052 | MS.gene057919:CDS |
| ACAAGTATCATCTTCATAGA+TGG | 0.329130 | 3.3:+15050717 | None:intergenic |
| GATAGGTATTCCTGCTTCTT+GGG | 0.338816 | 3.3:-15051517 | MS.gene057919:CDS |
| AAGCCCAGGACCAACATGTT+TGG | 0.344788 | 3.3:-15050522 | MS.gene057919:CDS |
| TGAATTGGGGTTTGCTGGCA+TGG | 0.361365 | 3.3:-15051037 | MS.gene057919:CDS |
| AGCCCAGGACCAACATGTTT+GGG | 0.368080 | 3.3:-15050521 | MS.gene057919:CDS |
| AGGAGAATGTTCAAGGAGTA+TGG | 0.375340 | 3.3:+15051350 | None:intergenic |
| CGTTCTGGACTGAAATATAT+TGG | 0.377694 | 3.3:+15051408 | None:intergenic |
| GCTGGGGACTCTCCTGTGAT+AGG | 0.378845 | 3.3:-15051534 | MS.gene057919:CDS |
| CCGCAATGATGATCACTTAG+AGG | 0.384163 | 3.3:-15050683 | MS.gene057919:CDS |
| AGATTCAAACCTCAATGTTT+GGG | 0.386204 | 3.3:-15051262 | MS.gene057919:CDS |
| GAATGGGAATGGTGATCATT+GGG | 0.389781 | 3.3:-15050428 | MS.gene057919:CDS |
| ATGCGTAAGACAACATATAA+TGG | 0.395074 | 3.3:-15051106 | MS.gene057919:CDS |
| CATTGGGGCAGTAACTATAA+TGG | 0.399780 | 3.3:-15050412 | MS.gene057919:CDS |
| AAATTCTTGTTGAGGGATGC+TGG | 0.410628 | 3.3:+15050946 | None:intergenic |
| CACCTGAAGTCTTAGCCAAA+TGG | 0.412401 | 3.3:+15051756 | None:intergenic |
| GAAAGCGAGCTGAGCAGAAC+AGG | 0.412737 | 3.3:-15050843 | MS.gene057919:CDS |
| ATCATCTTCGGCAGTGCAAC+TGG | 0.414815 | 3.3:+15051491 | None:intergenic |
| TCATGAGTTAATGTCCTTAT+GGG | 0.424228 | 3.3:+15051384 | None:intergenic |
| TTCTGAACGGTGATCATCTT+CGG | 0.425750 | 3.3:+15051479 | None:intergenic |
| AATGTCCTTATGGGTCGTTC+TGG | 0.428131 | 3.3:+15051393 | None:intergenic |
| ATGGACATCCTAGAGGGGCT+GGG | 0.429258 | 3.3:-15051551 | MS.gene057919:CDS |
| ATCCCAAACATGTTGGTCCT+GGG | 0.430334 | 3.3:+15050519 | None:intergenic |
| GATGCACCAGGGTGGGATCC+TGG | 0.430640 | 3.3:-15050346 | MS.gene057919:CDS |
| AGAATGGGAATGGTGATCAT+TGG | 0.436762 | 3.3:-15050429 | MS.gene057919:CDS |
| ACCCATTTGGCTAAGACTTC+AGG | 0.445192 | 3.3:-15051758 | MS.gene057919:intron |
| TCTAGCCTTGATGATGAAGT+TGG | 0.445677 | 3.3:-15051174 | MS.gene057919:CDS |
| AGAGAGACCAAGGTGAAGAA+TGG | 0.454735 | 3.3:-15050445 | MS.gene057919:CDS |
| TGATCAGCTCCAACTGATAC+AGG | 0.454985 | 3.3:+15051321 | None:intergenic |
| AGCATCTCCTCGGCATCAAA+AGG | 0.456032 | 3.3:+15051869 | None:intergenic |
| GAGAGACCAAGGTGAAGAAT+GGG | 0.458555 | 3.3:-15050444 | MS.gene057919:CDS |
| CCCTCATCTGATTCAAGCCC+AGG | 0.459996 | 3.3:-15050536 | MS.gene057919:CDS |
| CAACTGGTGGCCCAAGAAGC+AGG | 0.463711 | 3.3:+15051507 | None:intergenic |
| GTTCCAGAAATTCTTGTTGA+GGG | 0.466806 | 3.3:+15050939 | None:intergenic |
| CTTGATGATGAAGTTGGAAA+AGG | 0.469243 | 3.3:-15051168 | MS.gene057919:CDS |
| ACCATTCCCATTCTTCACCT+TGG | 0.469293 | 3.3:+15050438 | None:intergenic |
| AGGCTAGATAATTCCATCTC+AGG | 0.474272 | 3.3:+15051189 | None:intergenic |
| TGGACATCCTAGAGGGGCTG+GGG | 0.475484 | 3.3:-15051550 | MS.gene057919:CDS |
| ACCTGAAGTCTTAGCCAAAT+GGG | 0.476227 | 3.3:+15051757 | None:intergenic |
| ATCTTGCTCTAAAAGTAAGA+TGG | 0.482487 | 3.3:-15050317 | MS.gene057919:CDS |
| CAGAATCCTCATCTTCCTCA+TGG | 0.482931 | 3.3:+15050752 | None:intergenic |
| CAATGAATTTCTCAATCCCA+AGG | 0.484694 | 3.3:+15051058 | None:intergenic |
| TGATGATTGCGACACCCATT+TGG | 0.484841 | 3.3:-15051771 | MS.gene057919:CDS |
| GATGGACATCCTAGAGGGGC+TGG | 0.487190 | 3.3:-15051552 | MS.gene057919:CDS |
| CTGGAGCATTGTGATGCACC+AGG | 0.488708 | 3.3:-15050358 | MS.gene057919:CDS |
| TGATAACGGTAGATAATCGC+TGG | 0.490642 | 3.3:+15051811 | None:intergenic |
| CATCCCCATCCCAAACATTG+AGG | 0.498295 | 3.3:+15051253 | None:intergenic |
| ATCACCATCAATGTTACTCT+TGG | 0.499498 | 3.3:+15050600 | None:intergenic |
| CAAACCTCAATGTTTGGGAT+GGG | 0.499908 | 3.3:-15051257 | MS.gene057919:CDS |
| TGGGTGTCGCAATCATCATC+AGG | 0.505398 | 3.3:+15051776 | None:intergenic |
| GAATTGGGGTTTGCTGGCAT+GGG | 0.506212 | 3.3:-15051036 | MS.gene057919:CDS |
| TGTTAATGGAATAGTAGATC+AGG | 0.506535 | 3.3:-15050623 | MS.gene057919:CDS |
| GATAATTCCATCTCAGGCAT+AGG | 0.519691 | 3.3:+15051195 | None:intergenic |
| CAAGTATCATCTTCATAGAT+GGG | 0.519904 | 3.3:+15050718 | None:intergenic |
| TCAAGCTGATGTTCCTGCAT+GGG | 0.520099 | 3.3:-15051298 | MS.gene057919:CDS |
| TTGAGAAATTCATTGAATTG+GGG | 0.521028 | 3.3:-15051050 | MS.gene057919:CDS |
| TCAAACCTCAATGTTTGGGA+TGG | 0.524692 | 3.3:-15051258 | MS.gene057919:CDS |
| TTAGAGCAAGATACAAAGCC+AGG | 0.525570 | 3.3:+15050328 | None:intergenic |
| CCTCGCAAGCCTGTATCAGT+TGG | 0.530589 | 3.3:-15051330 | MS.gene057919:CDS |
| CCCATGTCATGTGATGTGTA+TGG | 0.535319 | 3.3:+15050478 | None:intergenic |
| CAGGCCAAGAGTAACATTGA+TGG | 0.535886 | 3.3:-15050604 | MS.gene057919:CDS |
| TATTATCCCTATGCCTGAGA+TGG | 0.538511 | 3.3:-15051202 | MS.gene057919:CDS |
| CTCAGGCATAGGGATAATAC+AGG | 0.539552 | 3.3:+15051206 | None:intergenic |
| ATAATTCCATCTCAGGCATA+GGG | 0.542120 | 3.3:+15051196 | None:intergenic |
| AAACCTCAATGTTTGGGATG+GGG | 0.542867 | 3.3:-15051256 | MS.gene057919:CDS |
| GGAGAGTCCCCAGCCCCTCT+AGG | 0.543130 | 3.3:+15051543 | None:intergenic |
| GAGAACAAGTGGCTCAAAAG+TGG | 0.552554 | 3.3:-15051014 | MS.gene057919:CDS |
| GCTTGCGAGGAGAATGTTCA+AGG | 0.553211 | 3.3:+15051343 | None:intergenic |
| TCAGTCCAGAACGACCCATA+AGG | 0.556681 | 3.3:-15051398 | MS.gene057919:CDS |
| AGTTCCAGAAATTCTTGTTG+AGG | 0.557435 | 3.3:+15050938 | None:intergenic |
| ATCAAGCTGATGTTCCTGCA+TGG | 0.557524 | 3.3:-15051299 | MS.gene057919:CDS |
| CTTGATATGCATCACTCTCG+TGG | 0.558540 | 3.3:-15050562 | MS.gene057919:CDS |
| GTTCTGGACTGAAGTACTCA+TGG | 0.558958 | 3.3:+15051433 | None:intergenic |
| TTCAAACACCCGAAACATGC+AGG | 0.560228 | 3.3:-15051836 | MS.gene057919:CDS |
| GTAAGCAATGGTTACAGCCA+AGG | 0.561471 | 3.3:-15050388 | MS.gene057919:CDS |
| GTTCAAGGAGTATGGAATAG+AGG | 0.561760 | 3.3:+15051358 | None:intergenic |
| TGCTGGCATGGGAGAACAAG+TGG | 0.566560 | 3.3:-15051025 | MS.gene057919:CDS |
| CACTATCAGCACTTAATAGG+TGG | 0.573148 | 3.3:+15050818 | None:intergenic |
| AACTATAATGGAGTAAGCAA+TGG | 0.575552 | 3.3:-15050400 | MS.gene057919:CDS |
| TTACAGCCAAGGGTATGTGC+TGG | 0.575897 | 3.3:-15050377 | MS.gene057919:CDS |
| ACCAAGGTGAAGAATGGGAA+TGG | 0.578690 | 3.3:-15050439 | MS.gene057919:CDS |
| TGCTGCCCATGAGGAAGATG+AGG | 0.581985 | 3.3:-15050758 | MS.gene057919:CDS |
| TCCATACACATCACATGACA+TGG | 0.582605 | 3.3:-15050479 | MS.gene057919:CDS |
| AATGCTCCAGCACATACCCT+TGG | 0.585409 | 3.3:+15050371 | None:intergenic |
| TCTTCAATCATGCTACATGT+AGG | 0.586716 | 3.3:+15050286 | None:intergenic |
| TGACACCTCAAGCATCTCCT+CGG | 0.591639 | 3.3:+15051859 | None:intergenic |
| CTTGCGATGGACATCCTAGA+GGG | 0.595100 | 3.3:-15051557 | MS.gene057919:CDS |
| AGAATCCTCATCTTCCTCAT+GGG | 0.598628 | 3.3:+15050753 | None:intergenic |
| TGATGCCGAGGAGATGCTTG+AGG | 0.599841 | 3.3:-15051864 | MS.gene057919:CDS |
| GAAGCAGGAATACCTATCAC+AGG | 0.602697 | 3.3:+15051522 | None:intergenic |
| CTGATAGTGATAATGATGAA+TGG | 0.603537 | 3.3:-15050804 | MS.gene057919:CDS |
| TCCTGGGCTTGAATCAGATG+AGG | 0.606024 | 3.3:+15050535 | None:intergenic |
| CCTGGGCTTGAATCAGATGA+GGG | 0.606854 | 3.3:+15050536 | None:intergenic |
| AATGAATTTCTCAATCCCAA+GGG | 0.607074 | 3.3:+15051059 | None:intergenic |
| CAATGAAGTTGCTGCCCATG+AGG | 0.610713 | 3.3:-15050767 | MS.gene057919:CDS |
| CTTGCTGTTGAAACTTGCGA+TGG | 0.613437 | 3.3:-15051570 | MS.gene057919:CDS |
| TAAGCAATGGTTACAGCCAA+GGG | 0.614655 | 3.3:-15050387 | MS.gene057919:CDS |
| GATGTATAGGCTGTTCTGAA+CGG | 0.621550 | 3.3:+15051466 | None:intergenic |
| GATTGTAGCTGCGAGGACAG+TGG | 0.623911 | 3.3:-15051138 | MS.gene057919:CDS |
| ATCTTCGGCAGTGCAACTGG+TGG | 0.626520 | 3.3:+15051494 | None:intergenic |
| CCAACTGATACAGGCTTGCG+AGG | 0.632606 | 3.3:+15051330 | None:intergenic |
| CATAAGGACATTAACTCATG+AGG | 0.642135 | 3.3:-15051382 | MS.gene057919:CDS |
| GCATTGTGATGCACCAGGGT+GGG | 0.646215 | 3.3:-15050353 | MS.gene057919:CDS |
| GATAACGGTAGATAATCGCT+GGG | 0.649982 | 3.3:+15051812 | None:intergenic |
| ACAAAGCCAGGATCCCACCC+TGG | 0.650732 | 3.3:+15050340 | None:intergenic |
| AGTTGCTTCAAGAGAGACCA+AGG | 0.656150 | 3.3:-15050455 | MS.gene057919:CDS |
| ATGAGTACTTCAGTCCAGAA+CGG | 0.667987 | 3.3:-15051431 | MS.gene057919:CDS |
| CCTCTAAGTGATCATCATTG+CGG | 0.670801 | 3.3:+15050683 | None:intergenic |
| TGGAGCATTGTGATGCACCA+GGG | 0.681363 | 3.3:-15050357 | MS.gene057919:CDS |
| CTGGGCTTGAATCAGATGAG+GGG | 0.684489 | 3.3:+15050537 | None:intergenic |
| AATGGGAATGGTGATCATTG+GGG | 0.687140 | 3.3:-15050427 | MS.gene057919:CDS |
| ACTTGCGATGGACATCCTAG+AGG | 0.688959 | 3.3:-15051558 | MS.gene057919:CDS |
| CCATACACATCACATGACAT+GGG | 0.689211 | 3.3:-15050478 | MS.gene057919:CDS |
| AGATGAACATCTATTTCACA+AGG | 0.692555 | 3.3:-15050983 | MS.gene057919:CDS |
| AGCATTGTGATGCACCAGGG+TGG | 0.699405 | 3.3:-15050354 | MS.gene057919:CDS |
| TTGCGATGGACATCCTAGAG+GGG | 0.710808 | 3.3:-15051556 | MS.gene057919:CDS |
| AGTGATAATGATGAATGGCA+AGG | 0.715180 | 3.3:-15050799 | MS.gene057919:CDS |
| ATAGAGGAAGGATATGCACA+AGG | 0.716188 | 3.3:-15051615 | MS.gene057919:intron |
| AAGAACTGATTGTAGCTGCG+AGG | 0.720002 | 3.3:-15051145 | MS.gene057919:CDS |
| GAGGAAGGATATGCACAAGG+TGG | 0.730040 | 3.3:-15051612 | MS.gene057919:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAACTATTAAAAACCCT+TGG | - | chr3.3:15051052-15051071 | MS.gene057919:CDS | 20.0% |
| !! | AAAAACTATTAAAAACCCTT+GGG | - | chr3.3:15051053-15051072 | MS.gene057919:CDS | 20.0% |
| !! | ACTATGTAATATACATTTCA+AGG | - | chr3.3:15050432-15050451 | MS.gene057919:CDS | 20.0% |
| !! | ATTGAGAAATTCATTGAATT+GGG | - | chr3.3:15051076-15051095 | MS.gene057919:CDS | 20.0% |
| ! | GATGAAAATTGTGATGTTAA+TGG | - | chr3.3:15051490-15051509 | MS.gene057919:CDS | 25.0% |
| ! | GATTGAGAAATTCATTGAAT+TGG | - | chr3.3:15051075-15051094 | MS.gene057919:CDS | 25.0% |
| ! | TTGAGAAATTCATTGAATTG+GGG | - | chr3.3:15051077-15051096 | MS.gene057919:CDS | 25.0% |
| AAGCTGAAAAAAGAATGATG+GGG | - | chr3.3:15050897-15050916 | MS.gene057919:CDS | 30.0% | |
| AATGAATTTCTCAATCCCAA+GGG | + | chr3.3:15051071-15051090 | None:intergenic | 30.0% | |
| ACAAGTATCATCTTCATAGA+TGG | + | chr3.3:15051413-15051432 | None:intergenic | 30.0% | |
| ACATTGTAATTCATAGAGGA+AGG | - | chr3.3:15050500-15050519 | MS.gene057919:CDS | 30.0% | |
| AGATGAACATCTATTTCACA+AGG | - | chr3.3:15051144-15051163 | MS.gene057919:CDS | 30.0% | |
| AGATTCAAACCTCAATGTTT+GGG | - | chr3.3:15050865-15050884 | MS.gene057919:CDS | 30.0% | |
| ATGCGTAAGACAACATATAA+TGG | - | chr3.3:15051021-15051040 | MS.gene057919:CDS | 30.0% | |
| CAAGTATCATCTTCATAGAT+GGG | + | chr3.3:15051412-15051431 | None:intergenic | 30.0% | |
| GAAGCTGAAAAAAGAATGAT+GGG | - | chr3.3:15050896-15050915 | MS.gene057919:CDS | 30.0% | |
| GGAAAAACAGATTCTGATAA+CGG | + | chr3.3:15050333-15050352 | None:intergenic | 30.0% | |
| GTCTACATTGTAATTCATAG+AGG | - | chr3.3:15050496-15050515 | MS.gene057919:CDS | 30.0% | |
| TATCACTATCAGCACTTAAT+AGG | + | chr3.3:15051315-15051334 | None:intergenic | 30.0% | |
| TCATGAGTTAATGTCCTTAT+GGG | + | chr3.3:15050746-15050765 | None:intergenic | 30.0% | |
| TGAAGCTGAAAAAAGAATGA+TGG | - | chr3.3:15050895-15050914 | MS.gene057919:CDS | 30.0% | |
| TGTTAATGGAATAGTAGATC+AGG | - | chr3.3:15051504-15051523 | MS.gene057919:CDS | 30.0% | |
| ! | AACTATAATGGAGTAAGCAA+TGG | - | chr3.3:15051727-15051746 | MS.gene057919:intron | 30.0% |
| ! | AGCATGATTGAAGAAGTTTT+TGG | - | chr3.3:15051850-15051869 | MS.gene057919:CDS | 30.0% |
| ! | CTGATAGTGATAATGATGAA+TGG | - | chr3.3:15051323-15051342 | MS.gene057919:CDS | 30.0% |
| ! | GTTTTTAATCTTGTGCAGTT+TGG | - | chr3.3:15050402-15050421 | MS.gene057919:CDS | 30.0% |
| !! | ATCTTGCTCTAAAAGTAAGA+TGG | - | chr3.3:15051810-15051829 | MS.gene057919:CDS | 30.0% |
| !! | ATTGAAGAAGTTTTTGGAGA+TGG | - | chr3.3:15051856-15051875 | MS.gene057919:CDS | 30.0% |
| AGTTCCAGAAATTCTTGTTG+AGG | + | chr3.3:15051192-15051211 | None:intergenic | 35.0% | |
| ATAATTCCATCTCAGGCATA+GGG | + | chr3.3:15050934-15050953 | None:intergenic | 35.0% | |
| ATCACCATCAATGTTACTCT+TGG | + | chr3.3:15051530-15051549 | None:intergenic | 35.0% | |
| CAATGAATTTCTCAATCCCA+AGG | + | chr3.3:15051072-15051091 | None:intergenic | 35.0% | |
| CAGATTCAAACCTCAATGTT+TGG | - | chr3.3:15050864-15050883 | MS.gene057919:CDS | 35.0% | |
| CATAAGGACATTAACTCATG+AGG | - | chr3.3:15050745-15050764 | MS.gene057919:CDS | 35.0% | |
| CTCATGAGTTAATGTCCTTA+TGG | + | chr3.3:15050747-15050766 | None:intergenic | 35.0% | |
| GTTCCAGAAATTCTTGTTGA+GGG | + | chr3.3:15051191-15051210 | None:intergenic | 35.0% | |
| TCTTCAATCATGCTACATGT+AGG | + | chr3.3:15051844-15051863 | None:intergenic | 35.0% | |
| TGGAAAAAGGGAAGATGTAT+AGG | + | chr3.3:15050677-15050696 | None:intergenic | 35.0% | |
| ! | ACTGAAGTACTCATGGAAAA+AGG | + | chr3.3:15050690-15050709 | None:intergenic | 35.0% |
| ! | AGTGATAATGATGAATGGCA+AGG | - | chr3.3:15051328-15051347 | MS.gene057919:CDS | 35.0% |
| ! | CGTTCTGGACTGAAATATAT+TGG | + | chr3.3:15050722-15050741 | None:intergenic | 35.0% |
| ! | CTGAAGTACTCATGGAAAAA+GGG | + | chr3.3:15050689-15050708 | None:intergenic | 35.0% |
| ! | CTTTTCCAACTTCATCATCA+AGG | + | chr3.3:15050961-15050980 | None:intergenic | 35.0% |
| !! | CTTGATGATGAAGTTGGAAA+AGG | - | chr3.3:15050959-15050978 | MS.gene057919:CDS | 35.0% |
| !! | CTTTTTCATCCCAAACATGT+TGG | + | chr3.3:15051618-15051637 | None:intergenic | 35.0% |
| AAATTCTTGTTGAGGGATGC+TGG | + | chr3.3:15051184-15051203 | None:intergenic | 40.0% | |
| AATGGGAATGGTGATCATTG+GGG | - | chr3.3:15051700-15051719 | MS.gene057919:intron | 40.0% | |
| ACCTGAAGTCTTAGCCAAAT+GGG | + | chr3.3:15050373-15050392 | None:intergenic | 40.0% | |
| AGAATCCTCATCTTCCTCAT+GGG | + | chr3.3:15051377-15051396 | None:intergenic | 40.0% | |
| AGAATGGGAATGGTGATCAT+TGG | - | chr3.3:15051698-15051717 | MS.gene057919:intron | 40.0% | |
| AGGAGAATGTTCAAGGAGTA+TGG | + | chr3.3:15050780-15050799 | None:intergenic | 40.0% | |
| AGGCTAGATAATTCCATCTC+AGG | + | chr3.3:15050941-15050960 | None:intergenic | 40.0% | |
| ATAGAGGAAGGATATGCACA+AGG | - | chr3.3:15050512-15050531 | MS.gene057919:CDS | 40.0% | |
| ATGAGTACTTCAGTCCAGAA+CGG | - | chr3.3:15050696-15050715 | MS.gene057919:CDS | 40.0% | |
| ATTTGGCTAAGACTTCAGGT+GGG | - | chr3.3:15050373-15050392 | MS.gene057919:CDS | 40.0% | |
| CACTATCAGCACTTAATAGG+TGG | + | chr3.3:15051312-15051331 | None:intergenic | 40.0% | |
| CATCCCTCAACAAGAATTTC+TGG | - | chr3.3:15051185-15051204 | MS.gene057919:CDS | 40.0% | |
| CATTGGGGCAGTAACTATAA+TGG | - | chr3.3:15051715-15051734 | MS.gene057919:intron | 40.0% | |
| CCATACACATCACATGACAT+GGG | - | chr3.3:15051649-15051668 | MS.gene057919:intron | 40.0% | |
| CCTCTAAGTGATCATCATTG+CGG | + | chr3.3:15051447-15051466 | None:intergenic | 40.0% | |
| CTGAAATATATTGGCCGTTC+TGG | + | chr3.3:15050713-15050732 | None:intergenic | 40.0% | |
| GAATGGGAATGGTGATCATT+GGG | - | chr3.3:15051699-15051718 | MS.gene057919:intron | 40.0% | |
| GATAATTCCATCTCAGGCAT+AGG | + | chr3.3:15050935-15050954 | None:intergenic | 40.0% | |
| GATAGGTATTCCTGCTTCTT+GGG | - | chr3.3:15050610-15050629 | MS.gene057919:CDS | 40.0% | |
| TAAGCAATGGTTACAGCCAA+GGG | - | chr3.3:15051740-15051759 | MS.gene057919:intron | 40.0% | |
| TATTATCCCTATGCCTGAGA+TGG | - | chr3.3:15050925-15050944 | MS.gene057919:CDS | 40.0% | |
| TCAAACCTCAATGTTTGGGA+TGG | - | chr3.3:15050869-15050888 | MS.gene057919:CDS | 40.0% | |
| TCCATACACATCACATGACA+TGG | - | chr3.3:15051648-15051667 | MS.gene057919:intron | 40.0% | |
| TGATAGGTATTCCTGCTTCT+TGG | - | chr3.3:15050609-15050628 | MS.gene057919:CDS | 40.0% | |
| TTAGAGCAAGATACAAAGCC+AGG | + | chr3.3:15051802-15051821 | None:intergenic | 40.0% | |
| TTCATTGAATTGGGGTTTGC+TGG | - | chr3.3:15051085-15051104 | MS.gene057919:CDS | 40.0% | |
| TTCTGAACGGTGATCATCTT+CGG | + | chr3.3:15050651-15050670 | None:intergenic | 40.0% | |
| ! | AAACCTCAATGTTTGGGATG+GGG | - | chr3.3:15050871-15050890 | MS.gene057919:CDS | 40.0% |
| ! | ATCTCCTTTTTGCTTCGTGA+GGG | + | chr3.3:15051232-15051251 | None:intergenic | 40.0% |
| ! | CAAACCTCAATGTTTGGGAT+GGG | - | chr3.3:15050870-15050889 | MS.gene057919:CDS | 40.0% |
| ! | GATAACGGTAGATAATCGCT+GGG | + | chr3.3:15050318-15050337 | None:intergenic | 40.0% |
| ! | GATGTATAGGCTGTTCTGAA+CGG | + | chr3.3:15050664-15050683 | None:intergenic | 40.0% |
| ! | GTTCAAGGAGTATGGAATAG+AGG | + | chr3.3:15050772-15050791 | None:intergenic | 40.0% |
| ! | TATCTCCTTTTTGCTTCGTG+AGG | + | chr3.3:15051233-15051252 | None:intergenic | 40.0% |
| ! | TTTTCCCTCACGAAGCAAAA+AGG | - | chr3.3:15051225-15051244 | MS.gene057919:CDS | 40.0% |
| !! | AAGTTTTTGGAGATGGACGA+AGG | - | chr3.3:15051863-15051882 | MS.gene057919:CDS | 40.0% |
| !! | TCTAGCCTTGATGATGAAGT+TGG | - | chr3.3:15050953-15050972 | MS.gene057919:CDS | 40.0% |
| !! | TGATAACGGTAGATAATCGC+TGG | + | chr3.3:15050319-15050338 | None:intergenic | 40.0% |
| !!! | TTCCTGCATGGGTTTTTTCT+GGG | - | chr3.3:15050840-15050859 | MS.gene057919:CDS | 40.0% |
| AAGAACTGATTGTAGCTGCG+AGG | - | chr3.3:15050982-15051001 | MS.gene057919:CDS | 45.0% | |
| AATGTCCTTATGGGTCGTTC+TGG | + | chr3.3:15050737-15050756 | None:intergenic | 45.0% | |
| ACCAAGGTGAAGAATGGGAA+TGG | - | chr3.3:15051688-15051707 | MS.gene057919:intron | 45.0% | |
| ACCATTCCCATTCTTCACCT+TGG | + | chr3.3:15051692-15051711 | None:intergenic | 45.0% | |
| ACCCATTTGGCTAAGACTTC+AGG | - | chr3.3:15050369-15050388 | MS.gene057919:CDS | 45.0% | |
| AGAGAGACCAAGGTGAAGAA+TGG | - | chr3.3:15051682-15051701 | MS.gene057919:intron | 45.0% | |
| AGTTGCTTCAAGAGAGACCA+AGG | - | chr3.3:15051672-15051691 | MS.gene057919:intron | 45.0% | |
| ATCAAGCTGATGTTCCTGCA+TGG | - | chr3.3:15050828-15050847 | MS.gene057919:CDS | 45.0% | |
| ATCCCAAACATGTTGGTCCT+GGG | + | chr3.3:15051611-15051630 | None:intergenic | 45.0% | |
| CACCTGAAGTCTTAGCCAAA+TGG | + | chr3.3:15050374-15050393 | None:intergenic | 45.0% | |
| CAGAATCCTCATCTTCCTCA+TGG | + | chr3.3:15051378-15051397 | None:intergenic | 45.0% | |
| CAGGCCAAGAGTAACATTGA+TGG | - | chr3.3:15051523-15051542 | MS.gene057919:CDS | 45.0% | |
| CATTTGGCTAAGACTTCAGG+TGG | - | chr3.3:15050372-15050391 | MS.gene057919:CDS | 45.0% | |
| CCCATGTCATGTGATGTGTA+TGG | + | chr3.3:15051652-15051671 | None:intergenic | 45.0% | |
| CCGCAATGATGATCACTTAG+AGG | - | chr3.3:15051444-15051463 | MS.gene057919:CDS | 45.0% | |
| CTCAGGCATAGGGATAATAC+AGG | + | chr3.3:15050924-15050943 | None:intergenic | 45.0% | |
| CTTGATATGCATCACTCTCG+TGG | - | chr3.3:15051565-15051584 | MS.gene057919:CDS | 45.0% | |
| GAAGCAGGAATACCTATCAC+AGG | + | chr3.3:15050608-15050627 | None:intergenic | 45.0% | |
| GAGAACAAGTGGCTCAAAAG+TGG | - | chr3.3:15051113-15051132 | MS.gene057919:CDS | 45.0% | |
| GAGAGACCAAGGTGAAGAAT+GGG | - | chr3.3:15051683-15051702 | MS.gene057919:intron | 45.0% | |
| GCTTCGTGAGGGAAAAACAA+TGG | + | chr3.3:15051221-15051240 | None:intergenic | 45.0% | |
| GTAAGCAATGGTTACAGCCA+AGG | - | chr3.3:15051739-15051758 | MS.gene057919:intron | 45.0% | |
| TCAAGCTGATGTTCCTGCAT+GGG | - | chr3.3:15050829-15050848 | MS.gene057919:CDS | 45.0% | |
| TGATCAGCTCCAACTGATAC+AGG | + | chr3.3:15050809-15050828 | None:intergenic | 45.0% | |
| TGATGATTGCGACACCCATT+TGG | - | chr3.3:15050356-15050375 | MS.gene057919:CDS | 45.0% | |
| TTCAAACACCCGAAACATGC+AGG | - | chr3.3:15050291-15050310 | MS.gene057919:CDS | 45.0% | |
| ! | GTTCTGGACTGAAGTACTCA+TGG | + | chr3.3:15050697-15050716 | None:intergenic | 45.0% |
| !! | CTTGCTGTTGAAACTTGCGA+TGG | - | chr3.3:15050557-15050576 | MS.gene057919:CDS | 45.0% |
| !!! | GTTCCTGCATGGGTTTTTTC+TGG | - | chr3.3:15050839-15050858 | MS.gene057919:CDS | 45.0% |
| AAGCCCAGGACCAACATGTT+TGG | - | chr3.3:15051605-15051624 | MS.gene057919:CDS | 50.0% | |
| AATGCTCCAGCACATACCCT+TGG | + | chr3.3:15051759-15051778 | None:intergenic | 50.0% | |
| ACTTGCGATGGACATCCTAG+AGG | - | chr3.3:15050569-15050588 | MS.gene057919:CDS | 50.0% | |
| AGCATCTCCTCGGCATCAAA+AGG | + | chr3.3:15050261-15050280 | None:intergenic | 50.0% | |
| AGCCCAGGACCAACATGTTT+GGG | - | chr3.3:15051606-15051625 | MS.gene057919:CDS | 50.0% | |
| ATCATCTTCGGCAGTGCAAC+TGG | + | chr3.3:15050639-15050658 | None:intergenic | 50.0% | |
| CAATGAAGTTGCTGCCCATG+AGG | - | chr3.3:15051360-15051379 | MS.gene057919:CDS | 50.0% | |
| CATCCCAAACATGTTGGTCC+TGG | + | chr3.3:15051612-15051631 | None:intergenic | 50.0% | |
| CATCCCCATCCCAAACATTG+AGG | + | chr3.3:15050877-15050896 | None:intergenic | 50.0% | |
| CCTGGGCTTGAATCAGATGA+GGG | + | chr3.3:15051594-15051613 | None:intergenic | 50.0% | |
| CTGGGCTTGAATCAGATGAG+GGG | + | chr3.3:15051593-15051612 | None:intergenic | 50.0% | |
| CTTGCGATGGACATCCTAGA+GGG | - | chr3.3:15050570-15050589 | MS.gene057919:CDS | 50.0% | |
| GACCCAGAAAAAACCCATGC+AGG | + | chr3.3:15050845-15050864 | None:intergenic | 50.0% | |
| GAGGAAGGATATGCACAAGG+TGG | - | chr3.3:15050515-15050534 | MS.gene057919:CDS | 50.0% | |
| GCTTGCGAGGAGAATGTTCA+AGG | + | chr3.3:15050787-15050806 | None:intergenic | 50.0% | |
| TCAGTCCAGAACGACCCATA+AGG | - | chr3.3:15050729-15050748 | MS.gene057919:CDS | 50.0% | |
| TCCTGGGCTTGAATCAGATG+AGG | + | chr3.3:15051595-15051614 | None:intergenic | 50.0% | |
| TGACACCTCAAGCATCTCCT+CGG | + | chr3.3:15050271-15050290 | None:intergenic | 50.0% | |
| TTGCGATGGACATCCTAGAG+GGG | - | chr3.3:15050571-15050590 | MS.gene057919:CDS | 50.0% | |
| ! | GAAACGTCCTTTTGATGCCG+AGG | - | chr3.3:15050251-15050270 | MS.gene057919:CDS | 50.0% |
| ! | TGGGTGTCGCAATCATCATC+AGG | + | chr3.3:15050354-15050373 | None:intergenic | 50.0% |
| ! | TTACAGCCAAGGGTATGTGC+TGG | - | chr3.3:15051750-15051769 | MS.gene057919:intron | 50.0% |
| !! | GAATTGGGGTTTGCTGGCAT+GGG | - | chr3.3:15051091-15051110 | MS.gene057919:CDS | 50.0% |
| !! | TGAATTGGGGTTTGCTGGCA+TGG | - | chr3.3:15051090-15051109 | MS.gene057919:CDS | 50.0% |
| !! | TGGAGCATTGTGATGCACCA+GGG | - | chr3.3:15051770-15051789 | MS.gene057919:CDS | 50.0% |
| AGCATTGTGATGCACCAGGG+TGG | - | chr3.3:15051773-15051792 | MS.gene057919:CDS | 55.0% | |
| ATCTTCGGCAGTGCAACTGG+TGG | + | chr3.3:15050636-15050655 | None:intergenic | 55.0% | |
| ATGGACATCCTAGAGGGGCT+GGG | - | chr3.3:15050576-15050595 | MS.gene057919:CDS | 55.0% | |
| CCAACTGATACAGGCTTGCG+AGG | + | chr3.3:15050800-15050819 | None:intergenic | 55.0% | |
| CCCTCATCTGATTCAAGCCC+AGG | - | chr3.3:15051591-15051610 | MS.gene057919:CDS | 55.0% | |
| CCTCGCAAGCCTGTATCAGT+TGG | - | chr3.3:15050797-15050816 | MS.gene057919:CDS | 55.0% | |
| GAAAGCGAGCTGAGCAGAAC+AGG | - | chr3.3:15051284-15051303 | MS.gene057919:CDS | 55.0% | |
| GATTGTAGCTGCGAGGACAG+TGG | - | chr3.3:15050989-15051008 | MS.gene057919:CDS | 55.0% | |
| GCATTGTGATGCACCAGGGT+GGG | - | chr3.3:15051774-15051793 | MS.gene057919:CDS | 55.0% | |
| TCGCTGGGACCTGCATGTTT+CGG | + | chr3.3:15050303-15050322 | None:intergenic | 55.0% | |
| TGATGCCGAGGAGATGCTTG+AGG | - | chr3.3:15050263-15050282 | MS.gene057919:CDS | 55.0% | |
| TGCTGCCCATGAGGAAGATG+AGG | - | chr3.3:15051369-15051388 | MS.gene057919:CDS | 55.0% | |
| TGCTGGCATGGGAGAACAAG+TGG | - | chr3.3:15051102-15051121 | MS.gene057919:CDS | 55.0% | |
| !! | CTGGAGCATTGTGATGCACC+AGG | - | chr3.3:15051769-15051788 | MS.gene057919:CDS | 55.0% |
| ACAAAGCCAGGATCCCACCC+TGG | + | chr3.3:15051790-15051809 | None:intergenic | 60.0% | |
| CAACTGGTGGCCCAAGAAGC+AGG | + | chr3.3:15050623-15050642 | None:intergenic | 60.0% | |
| CGCTGGGACCTGCATGTTTC+GGG | + | chr3.3:15050302-15050321 | None:intergenic | 60.0% | |
| GATGGACATCCTAGAGGGGC+TGG | - | chr3.3:15050575-15050594 | MS.gene057919:CDS | 60.0% | |
| GCTGGGGACTCTCCTGTGAT+AGG | - | chr3.3:15050593-15050612 | MS.gene057919:CDS | 60.0% | |
| TGGACATCCTAGAGGGGCTG+GGG | - | chr3.3:15050577-15050596 | MS.gene057919:CDS | 60.0% | |
| GATGCACCAGGGTGGGATCC+TGG | - | chr3.3:15051781-15051800 | MS.gene057919:CDS | 65.0% | |
| GGAGAGTCCCCAGCCCCTCT+AGG | + | chr3.3:15050587-15050606 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 15050243 | 15051906 | 15050243 | ID=MS.gene057919 |
| chr3.3 | mRNA | 15050243 | 15051906 | 15050243 | ID=MS.gene057919.t1;Parent=MS.gene057919 |
| chr3.3 | exon | 15051759 | 15051906 | 15051759 | ID=MS.gene057919.t1.exon1;Parent=MS.gene057919.t1 |
| chr3.3 | CDS | 15051759 | 15051906 | 15051759 | ID=cds.MS.gene057919.t1;Parent=MS.gene057919.t1 |
| chr3.3 | exon | 15050243 | 15051633 | 15050243 | ID=MS.gene057919.t1.exon2;Parent=MS.gene057919.t1 |
| chr3.3 | CDS | 15050243 | 15051633 | 15050243 | ID=cds.MS.gene057919.t1;Parent=MS.gene057919.t1 |
| Gene Sequence |
| Protein sequence |
