Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062188.t1 | XP_013468843.1 | 91.9 | 111 | 9 | 0 | 2 | 112 | 20 | 130 | 7.60E-46 | 193 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062188.t1 | Q9FZ89 | 66.2 | 74 | 23 | 1 | 41 | 112 | 50 | 123 | 5.2e-19 | 95.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062188.t1 | A0A072VXV9 | 91.9 | 111 | 9 | 0 | 2 | 112 | 20 | 130 | 5.5e-46 | 193.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050592 | MS.gene062188 | -0.801458 | 8.92E-49 | -1.69E-46 |
| MS.gene057684 | MS.gene062188 | 0.809104 | 2.23E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062188.t1 | MTR_1g077550 | 91.892 | 111 | 9 | 0 | 2 | 112 | 20 | 130 | 2.79e-69 | 204 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062188.t1 | AT1G28150 | 66.216 | 74 | 23 | 1 | 41 | 112 | 50 | 123 | 1.84e-28 | 100 |
| MS.gene062188.t1 | AT1G28150 | 66.216 | 74 | 23 | 1 | 41 | 112 | 50 | 123 | 1.84e-28 | 100 |
Find 28 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTCAGTAGTTGATTCTTC+TGG | 0.258189 | 1.1:-58047452 | None:intergenic |
| AAAACCGATGCTTCGGGTTC+TGG | 0.272251 | 1.1:-58045349 | None:intergenic |
| TTCTTAGGTGGGATATTTGC+TGG | 0.305119 | 1.1:+58047338 | MS.gene062188:CDS |
| CAGGAACCAGTGGCATTCTT+AGG | 0.325742 | 1.1:+58047323 | MS.gene062188:intron |
| TGCTTCGGGTTCTGGTGATT+CGG | 0.328190 | 1.1:-58045341 | None:intergenic |
| GAGAATTAAAACCGATGCTT+CGG | 0.341279 | 1.1:-58045356 | None:intergenic |
| GCTTCGGGTTCTGGTGATTC+GGG | 0.354503 | 1.1:-58045340 | None:intergenic |
| AGAATTAAAACCGATGCTTC+GGG | 0.388677 | 1.1:-58045355 | None:intergenic |
| AGTAGTTGATTCTTCTGGAT+TGG | 0.410215 | 1.1:-58047447 | None:intergenic |
| TGAAATTGAAGCAGGAATGT+AGG | 0.466785 | 1.1:+58045289 | MS.gene062188:intron |
| TTGACGAGAGGGTCTTGTGC+AGG | 0.474518 | 1.1:-58045423 | None:intergenic |
| TATTCAATTTCAATCTCTTG+TGG | 0.483856 | 1.1:-58047479 | None:intergenic |
| TATCACCATCATCACTTTCG+CGG | 0.484312 | 1.1:+58045316 | MS.gene062188:CDS |
| ATGAGGAACCTCTGAAGGAA+TGG | 0.505614 | 1.1:+58047381 | MS.gene062188:CDS |
| TTTAAGGCTTGATTTGAATG+AGG | 0.510298 | 1.1:+58047364 | MS.gene062188:CDS |
| TGAGGAACCTCTGAAGGAAT+GGG | 0.523835 | 1.1:+58047382 | MS.gene062188:CDS |
| CGGGTCCGCGAAAGTGATGA+TGG | 0.533881 | 1.1:-58045321 | None:intergenic |
| CTCGTAACCCATTCCTTCAG+AGG | 0.539677 | 1.1:-58047389 | None:intergenic |
| TTCTAATCTGCAGGAACCAG+TGG | 0.542541 | 1.1:+58047313 | MS.gene062188:intron |
| GAACCAGTGGCATTCTTAGG+TGG | 0.545711 | 1.1:+58047326 | MS.gene062188:CDS |
| ATCACCAGAACCCGAAGCAT+CGG | 0.558374 | 1.1:+58045345 | MS.gene062188:CDS |
| TTTGAATGAGGAACCTCTGA+AGG | 0.563194 | 1.1:+58047376 | MS.gene062188:CDS |
| TGACAGCTTCTTTGACGAGA+GGG | 0.564005 | 1.1:-58045434 | None:intergenic |
| ATCCCACCTAAGAATGCCAC+TGG | 0.574031 | 1.1:-58047329 | None:intergenic |
| CTCTGAAGGAATGGGTTACG+AGG | 0.596910 | 1.1:+58047390 | MS.gene062188:CDS |
| AACCAGTGGCATTCTTAGGT+GGG | 0.598806 | 1.1:+58047327 | MS.gene062188:CDS |
| TCTCGTCAAAGAAGCTGTCA+AGG | 0.609141 | 1.1:+58045437 | MS.gene062188:CDS |
| TTGACAGCTTCTTTGACGAG+AGG | 0.633404 | 1.1:-58045435 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTTAGCTTATTTAT+TGG | + | chr1.1:58045528-58045547 | MS.gene062188:intron | 10.0% |
| !! | GAGAAATAAATAAATTGTAA+TGG | - | chr1.1:58046333-58046352 | None:intergenic | 15.0% |
| !!! | TCAAGTTATTCTAAAATTTT+GGG | - | chr1.1:58046774-58046793 | None:intergenic | 15.0% |
| !!! | TTCAAGTTATTCTAAAATTT+TGG | - | chr1.1:58046775-58046794 | None:intergenic | 15.0% |
| !! | ACAAAATTAACAACTAACAT+TGG | + | chr1.1:58045819-58045838 | MS.gene062188:intron | 20.0% |
| !! | AGCTAAAAATAAATACAAGA+AGG | - | chr1.1:58045521-58045540 | None:intergenic | 20.0% |
| !! | CAAAATTAACAACTAACATT+GGG | + | chr1.1:58045820-58045839 | MS.gene062188:intron | 20.0% |
| !! | TGATTCTACTATGATTTATT+AGG | - | chr1.1:58046483-58046502 | None:intergenic | 20.0% |
| !! | TTGATAAATAAAGAAGTTCA+TGG | - | chr1.1:58046978-58046997 | None:intergenic | 20.0% |
| !!! | ATTTATTTCTCAGTTCTTTT+TGG | + | chr1.1:58046342-58046361 | MS.gene062188:intron | 20.0% |
| !!! | CAATTTTATCACAATTCTAT+AGG | + | chr1.1:58047203-58047222 | MS.gene062188:intron | 20.0% |
| !!! | TTTATTTCTCAGTTCTTTTT+GGG | + | chr1.1:58046343-58046362 | MS.gene062188:intron | 20.0% |
| !!! | TTTGAAGTTCTGTTATTTTT+GGG | - | chr1.1:58046387-58046406 | None:intergenic | 20.0% |
| ! | AATGAAAAAGTTCTCACAAA+GGG | - | chr1.1:58046902-58046921 | None:intergenic | 25.0% |
| ! | ACTACAAAGCTCTATAATAT+AGG | + | chr1.1:58046737-58046756 | MS.gene062188:intron | 25.0% |
| ! | TATTCAATTTCAATCTCTTG+TGG | - | chr1.1:58047482-58047501 | None:intergenic | 25.0% |
| ! | TCAACAAAAGTTAATGTATC+TGG | + | chr1.1:58045631-58045650 | MS.gene062188:intron | 25.0% |
| ! | TGTCTTAGTTAATATGGATT+AGG | - | chr1.1:58046509-58046528 | None:intergenic | 25.0% |
| ! | TTGTTCATGAATCAATAGTA+CGG | - | chr1.1:58046075-58046094 | None:intergenic | 25.0% |
| !! | AATTTCAGTTTTACACCAAA+AGG | - | chr1.1:58046205-58046224 | None:intergenic | 25.0% |
| !! | TGATGATGTCTTAGTTAATA+TGG | - | chr1.1:58046515-58046534 | None:intergenic | 25.0% |
| !!! | ATTGCTAGGCTTTAAAAATT+TGG | + | chr1.1:58047261-58047280 | MS.gene062188:intron | 25.0% |
| !!! | CTTTGAAGTTCTGTTATTTT+TGG | - | chr1.1:58046388-58046407 | None:intergenic | 25.0% |
| !!! | TTCTTTTTGGGATAAAAAGA+GGG | + | chr1.1:58046355-58046374 | MS.gene062188:intron | 25.0% |
| AAAACTGTCAGTGTGAAATA+TGG | + | chr1.1:58046112-58046131 | MS.gene062188:intron | 30.0% | |
| AACTTCAAAGCAATTAAACG+TGG | + | chr1.1:58046398-58046417 | MS.gene062188:intron | 30.0% | |
| CTTGAAATTGAAATTGAAGC+AGG | + | chr1.1:58045281-58045300 | MS.gene062188:intron | 30.0% | |
| GAATGAAAAAGTTCTCACAA+AGG | - | chr1.1:58046903-58046922 | None:intergenic | 30.0% | |
| GTGTTCAGCTTATTTCAATT+TGG | + | chr1.1:58045562-58045581 | MS.gene062188:intron | 30.0% | |
| TATCTTGTATATAGTACCTG+AGG | - | chr1.1:58045603-58045622 | None:intergenic | 30.0% | |
| TATGTTAACAAGTTGCTATC+TGG | + | chr1.1:58047133-58047152 | MS.gene062188:intron | 30.0% | |
| TTGTGTTTGTATGCTTGTAA+TGG | - | chr1.1:58046269-58046288 | None:intergenic | 30.0% | |
| ! | ATGGACTGTAATTTAGGAAT+TGG | + | chr1.1:58046866-58046885 | MS.gene062188:intron | 30.0% |
| ! | CTAATCATGGACTGTAATTT+AGG | + | chr1.1:58046860-58046879 | MS.gene062188:intron | 30.0% |
| ! | GAATAGAATGTTGCTTGAAA+TGG | - | chr1.1:58046585-58046604 | None:intergenic | 30.0% |
| ! | TCATACCAGTGTTATTACAA+GGG | - | chr1.1:58047026-58047045 | None:intergenic | 30.0% |
| ! | TTCATACCAGTGTTATTACA+AGG | - | chr1.1:58047027-58047046 | None:intergenic | 30.0% |
| ! | TTTAAGGCTTGATTTGAATG+AGG | + | chr1.1:58047364-58047383 | MS.gene062188:CDS | 30.0% |
| !! | GGATATTTGCTGGTATTTTA+AGG | + | chr1.1:58047348-58047367 | MS.gene062188:CDS | 30.0% |
| !! | TATAGAGCTTTGTAGTGTTT+TGG | - | chr1.1:58046733-58046752 | None:intergenic | 30.0% |
| !! | TCTTGTTATTTCTAATCTGC+AGG | + | chr1.1:58047304-58047323 | MS.gene062188:intron | 30.0% |
| !!! | GGTTTTAATTCTCAAAGACA+CGG | + | chr1.1:58045366-58045385 | MS.gene062188:CDS | 30.0% |
| !!! | GTTCTTTTTGGGATAAAAAG+AGG | + | chr1.1:58046354-58046373 | MS.gene062188:intron | 30.0% |
| AAAGCAATTAAACGTGGAGT+AGG | + | chr1.1:58046404-58046423 | MS.gene062188:intron | 35.0% | |
| AATTAAGCAATTGCACTTGC+AGG | - | chr1.1:58045872-58045891 | None:intergenic | 35.0% | |
| AGAATTAAAACCGATGCTTC+GGG | - | chr1.1:58045358-58045377 | None:intergenic | 35.0% | |
| ATGAACCCTTGTAATAACAC+TGG | + | chr1.1:58047018-58047037 | MS.gene062188:intron | 35.0% | |
| GAGAATTAAAACCGATGCTT+CGG | - | chr1.1:58045359-58045378 | None:intergenic | 35.0% | |
| GCTGACATAAAAGCTCTATT+TGG | - | chr1.1:58045906-58045925 | None:intergenic | 35.0% | |
| GGTTGGATTAAGCTTAACAT+GGG | - | chr1.1:58046821-58046840 | None:intergenic | 35.0% | |
| GTATATAAAAAACACGCCTC+AGG | + | chr1.1:58045584-58045603 | MS.gene062188:intron | 35.0% | |
| GTTGGATTAAGCTTAACATG+GGG | - | chr1.1:58046820-58046839 | None:intergenic | 35.0% | |
| TAAAGAAGTTCATGGTGAAC+TGG | - | chr1.1:58046970-58046989 | None:intergenic | 35.0% | |
| TACAGTCCATGATTAGATTG+TGG | - | chr1.1:58046856-58046875 | None:intergenic | 35.0% | |
| TAGCTACATCATAAGAACCA+GGG | - | chr1.1:58047179-58047198 | None:intergenic | 35.0% | |
| TGAAATTGAAGCAGGAATGT+AGG | + | chr1.1:58045289-58045308 | MS.gene062188:intron | 35.0% | |
| TTAACAAGTTGCTATCTGGA+TGG | + | chr1.1:58047137-58047156 | MS.gene062188:intron | 35.0% | |
| TTAAGCTTAATCCAACCCAA+AGG | + | chr1.1:58046824-58046843 | MS.gene062188:intron | 35.0% | |
| ! | AGTAGTTGATTCTTCTGGAT+TGG | - | chr1.1:58047450-58047469 | None:intergenic | 35.0% |
| ! | TGCAAAAGTCATGTTCCTTT+TGG | + | chr1.1:58046187-58046206 | MS.gene062188:intron | 35.0% |
| AACGATTTCTCCAATGACTG+TGG | - | chr1.1:58046632-58046651 | None:intergenic | 40.0% | |
| ACAAGCTGCTGTAGAAAAAC+AGG | + | chr1.1:58046285-58046304 | MS.gene062188:intron | 40.0% | |
| ACTTGTAAAGTTCGCAACCA+AGG | - | chr1.1:58046032-58046051 | None:intergenic | 40.0% | |
| AGGTAGCCACAATCTAATCA+TGG | + | chr1.1:58046847-58046866 | MS.gene062188:intron | 40.0% | |
| AGTCATTGGAGAAATCGTTG+AGG | + | chr1.1:58046633-58046652 | MS.gene062188:intron | 40.0% | |
| AGTTAGAGAGTGGAGTGATA+AGG | + | chr1.1:58045771-58045790 | MS.gene062188:intron | 40.0% | |
| ATCTTGTTGGAGGTTCTACT+CGG | - | chr1.1:58045707-58045726 | None:intergenic | 40.0% | |
| CTCATGAGTCATGACAGAAA+TGG | - | chr1.1:58046235-58046254 | None:intergenic | 40.0% | |
| GACATCATCAGTACATGAGT+TGG | + | chr1.1:58046525-58046544 | MS.gene062188:intron | 40.0% | |
| GAGAATTTCCATGCTCTAGT+TGG | - | chr1.1:58046461-58046480 | None:intergenic | 40.0% | |
| GGGTTGGATTAAGCTTAACA+TGG | - | chr1.1:58046822-58046841 | None:intergenic | 40.0% | |
| GTAGCTACATCATAAGAACC+AGG | - | chr1.1:58047180-58047199 | None:intergenic | 40.0% | |
| GTTAGAGAGTGGAGTGATAA+GGG | + | chr1.1:58045772-58045791 | MS.gene062188:intron | 40.0% | |
| TAACATGGGGCTTCTAATAG+TGG | - | chr1.1:58046807-58046826 | None:intergenic | 40.0% | |
| TACATCATAAGAACCAGGGA+TGG | - | chr1.1:58047175-58047194 | None:intergenic | 40.0% | |
| TATCACCATCATCACTTTCG+CGG | + | chr1.1:58045316-58045335 | MS.gene062188:CDS | 40.0% | |
| TGAGACATGGCACAACTATA+TGG | - | chr1.1:58045950-58045969 | None:intergenic | 40.0% | |
| TGGAGAGATTGTAGTTAACC+TGG | - | chr1.1:58046713-58046732 | None:intergenic | 40.0% | |
| TTCTTAGGTGGGATATTTGC+TGG | + | chr1.1:58047338-58047357 | MS.gene062188:CDS | 40.0% | |
| TTGTAGTTAACCTGGTCTGA+TGG | - | chr1.1:58046705-58046724 | None:intergenic | 40.0% | |
| TTTCTCTTAGCTGATCTCGT+TGG | - | chr1.1:58046434-58046453 | None:intergenic | 40.0% | |
| TTTGAATGAGGAACCTCTGA+AGG | + | chr1.1:58047376-58047395 | MS.gene062188:CDS | 40.0% | |
| ! | GCTTCAGTAGTTGATTCTTC+TGG | - | chr1.1:58047455-58047474 | None:intergenic | 40.0% |
| ! | TGGTGAACTGGTGAACTTTT+CGG | - | chr1.1:58046958-58046977 | None:intergenic | 40.0% |
| AACACGTGAGACATGAGACA+TGG | - | chr1.1:58045963-58045982 | None:intergenic | 45.0% | |
| AACCAGTGGCATTCTTAGGT+GGG | + | chr1.1:58047327-58047346 | MS.gene062188:CDS | 45.0% | |
| AACCTCCAACAAGATCAGCT+AGG | + | chr1.1:58045712-58045731 | MS.gene062188:intron | 45.0% | |
| AGATTGTGGCTACCTCCTTT+GGG | - | chr1.1:58046842-58046861 | None:intergenic | 45.0% | |
| AGCTTAATCCAACCCAAAGG+AGG | + | chr1.1:58046827-58046846 | MS.gene062188:intron | 45.0% | |
| GAAACAAGCCAACTAGAGCA+TGG | + | chr1.1:58046450-58046469 | MS.gene062188:intron | 45.0% | |
| GAAGTGGAACAGTTAGAGAG+TGG | + | chr1.1:58045761-58045780 | MS.gene062188:intron | 45.0% | |
| GGTTGCGAACTTTACAAGTC+AGG | + | chr1.1:58046033-58046052 | MS.gene062188:intron | 45.0% | |
| TAGATTGTGGCTACCTCCTT+TGG | - | chr1.1:58046843-58046862 | None:intergenic | 45.0% | |
| TCCAACAAGATCAGCTAGGA+GGG | + | chr1.1:58045716-58045735 | MS.gene062188:intron | 45.0% | |
| TCTCGTCAAAGAAGCTGTCA+AGG | + | chr1.1:58045437-58045456 | MS.gene062188:CDS | 45.0% | |
| TGACAGCTTCTTTGACGAGA+GGG | - | chr1.1:58045437-58045456 | None:intergenic | 45.0% | |
| TTAGTTGTGTCCTGTGACCT+TGG | + | chr1.1:58046012-58046031 | MS.gene062188:intron | 45.0% | |
| TTCTAATCTGCAGGAACCAG+TGG | + | chr1.1:58047313-58047332 | MS.gene062188:intron | 45.0% | |
| TTGACAGCTTCTTTGACGAG+AGG | - | chr1.1:58045438-58045457 | None:intergenic | 45.0% | |
| ! | ATGAGGAACCTCTGAAGGAA+TGG | + | chr1.1:58047381-58047400 | MS.gene062188:CDS | 45.0% |
| ! | ATGTTGCTTGAAATGGCGAG+AGG | - | chr1.1:58046578-58046597 | None:intergenic | 45.0% |
| ! | CATGAGTTGGCTTCACGATA+TGG | + | chr1.1:58046538-58046557 | MS.gene062188:intron | 45.0% |
| ! | GGTGAACTGGTGAACTTTTC+GGG | - | chr1.1:58046957-58046976 | None:intergenic | 45.0% |
| ! | GTAAGTTGACTTACCATCCC+TGG | + | chr1.1:58047159-58047178 | MS.gene062188:intron | 45.0% |
| ! | TGAGGAACCTCTGAAGGAAT+GGG | + | chr1.1:58047382-58047401 | MS.gene062188:CDS | 45.0% |
| !! | TGGAGTGATAAGGGTGTTCT+CGG | + | chr1.1:58045781-58045800 | MS.gene062188:intron | 45.0% |
| AAGTTCGCAACCAAGGTCAC+AGG | - | chr1.1:58046025-58046044 | None:intergenic | 50.0% | |
| AGCTCGAAATCCATCAGACC+AGG | + | chr1.1:58046692-58046711 | MS.gene062188:intron | 50.0% | |
| ATCACCAGAACCCGAAGCAT+CGG | + | chr1.1:58045345-58045364 | MS.gene062188:CDS | 50.0% | |
| ATCCCACCTAAGAATGCCAC+TGG | - | chr1.1:58047332-58047351 | None:intergenic | 50.0% | |
| CAGGAACCAGTGGCATTCTT+AGG | + | chr1.1:58047323-58047342 | MS.gene062188:intron | 50.0% | |
| CCAACAAGATCAGCTAGGAG+GGG | + | chr1.1:58045717-58045736 | MS.gene062188:intron | 50.0% | |
| CCTAGCAATGAACGTTCCTG+CGG | - | chr1.1:58047250-58047269 | None:intergenic | 50.0% | |
| CTAGCAATGAACGTTCCTGC+GGG | - | chr1.1:58047249-58047268 | None:intergenic | 50.0% | |
| CTCCAACAAGATCAGCTAGG+AGG | + | chr1.1:58045715-58045734 | MS.gene062188:intron | 50.0% | |
| CTCCTAGCTGATCTTGTTGG+AGG | - | chr1.1:58045717-58045736 | None:intergenic | 50.0% | |
| CTCGTAACCCATTCCTTCAG+AGG | - | chr1.1:58047392-58047411 | None:intergenic | 50.0% | |
| CTTGAAATGGCGAGAGGTGA+AGG | - | chr1.1:58046572-58046591 | None:intergenic | 50.0% | |
| GAACCAGTGGCATTCTTAGG+TGG | + | chr1.1:58047326-58047345 | MS.gene062188:CDS | 50.0% | |
| TCTCCAATGACTGTGGAGCT+CGG | - | chr1.1:58046625-58046644 | None:intergenic | 50.0% | |
| ! | AAAACCGATGCTTCGGGTTC+TGG | - | chr1.1:58045352-58045371 | None:intergenic | 50.0% |
| ! | CTCGGTGGAGTTTGGTGAAA+TGG | - | chr1.1:58046607-58046626 | None:intergenic | 50.0% |
| ! | TGCTTCGGGTTCTGGTGATT+CGG | - | chr1.1:58045344-58045363 | None:intergenic | 50.0% |
| !! | CTCTGAAGGAATGGGTTACG+AGG | + | chr1.1:58047390-58047409 | MS.gene062188:CDS | 50.0% |
| AAGCATTCTGTTCAGCCCGC+AGG | + | chr1.1:58047231-58047250 | MS.gene062188:intron | 55.0% | |
| AGTTGACGTGGTGGCTGAAG+TGG | + | chr1.1:58045745-58045764 | MS.gene062188:intron | 55.0% | |
| CCCCTCCTAGCTGATCTTGT+TGG | - | chr1.1:58045720-58045739 | None:intergenic | 55.0% | |
| CCGCAGGAACGTTCATTGCT+AGG | + | chr1.1:58047247-58047266 | MS.gene062188:intron | 55.0% | |
| TGTGGCTACCTCCTTTGGGT+TGG | - | chr1.1:58046838-58046857 | None:intergenic | 55.0% | |
| ! | GCTTCGGGTTCTGGTGATTC+GGG | - | chr1.1:58045343-58045362 | None:intergenic | 55.0% |
| ! | TTGACGAGAGGGTCTTGTGC+AGG | - | chr1.1:58045426-58045445 | None:intergenic | 55.0% |
| CCAATGACTGTGGAGCTCGG+TGG | - | chr1.1:58046622-58046641 | None:intergenic | 60.0% | |
| CCACCGAGCTCCACAGTCAT+TGG | + | chr1.1:58046619-58046638 | MS.gene062188:intron | 60.0% | |
| CGGGTCCGCGAAAGTGATGA+TGG | - | chr1.1:58045324-58045343 | None:intergenic | 60.0% | |
| GGGGTGTGAAGTTGACGTGG+TGG | + | chr1.1:58045736-58045755 | MS.gene062188:intron | 60.0% | |
| ! | CTGTGGAGCTCGGTGGAGTT+TGG | - | chr1.1:58046615-58046634 | None:intergenic | 60.0% |
| ! | GGAGGGGTGTGAAGTTGACG+TGG | + | chr1.1:58045733-58045752 | MS.gene062188:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 58045241 | 58047502 | 58045241 | ID=MS.gene062188 |
| chr1.1 | mRNA | 58045241 | 58047502 | 58045241 | ID=MS.gene062188.t1;Parent=MS.gene062188 |
| chr1.1 | exon | 58045241 | 58045243 | 58045241 | ID=MS.gene062188.t1.exon1;Parent=MS.gene062188.t1 |
| chr1.1 | CDS | 58045241 | 58045243 | 58045241 | ID=cds.MS.gene062188.t1;Parent=MS.gene062188.t1 |
| chr1.1 | exon | 58045300 | 58045458 | 58045300 | ID=MS.gene062188.t1.exon2;Parent=MS.gene062188.t1 |
| chr1.1 | CDS | 58045300 | 58045458 | 58045300 | ID=cds.MS.gene062188.t1;Parent=MS.gene062188.t1 |
| chr1.1 | exon | 58047326 | 58047502 | 58047326 | ID=MS.gene062188.t1.exon3;Parent=MS.gene062188.t1 |
| chr1.1 | CDS | 58047326 | 58047502 | 58047326 | ID=cds.MS.gene062188.t1;Parent=MS.gene062188.t1 |
| Gene Sequence |
| Protein sequence |
