Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062755.t1 | XP_003589253.1 | 97.4 | 549 | 14 | 0 | 1 | 549 | 1 | 549 | 0.00E+00 | 1079.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062755.t1 | Q8GZD4 | 68.3 | 549 | 171 | 2 | 4 | 549 | 3 | 551 | 2.5e-215 | 749.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062755.t1 | G7I4I7 | 97.4 | 549 | 14 | 0 | 1 | 549 | 1 | 549 | 0.0e+00 | 1079.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene062755 | MS.gene70718 | PPI |
MS.gene062755 | MS.gene044204 | PPI |
MS.gene25800 | MS.gene062755 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062755.t1 | MTR_1g021120 | 97.450 | 549 | 14 | 0 | 1 | 549 | 1 | 549 | 0.0 | 1098 |
MS.gene062755.t1 | MTR_8g086520 | 57.534 | 511 | 217 | 0 | 35 | 545 | 12 | 522 | 0.0 | 614 |
MS.gene062755.t1 | MTR_3g080390 | 57.977 | 514 | 215 | 1 | 33 | 545 | 5 | 518 | 0.0 | 607 |
MS.gene062755.t1 | MTR_2g016460 | 54.314 | 510 | 233 | 0 | 36 | 545 | 13 | 522 | 0.0 | 593 |
MS.gene062755.t1 | MTR_3g078270 | 51.852 | 513 | 245 | 1 | 36 | 546 | 19 | 531 | 0.0 | 542 |
MS.gene062755.t1 | MTR_4g106750 | 50.464 | 539 | 249 | 4 | 12 | 546 | 7 | 531 | 0.0 | 538 |
MS.gene062755.t1 | MTR_8g063220 | 51.076 | 511 | 248 | 1 | 38 | 546 | 22 | 532 | 0.0 | 532 |
MS.gene062755.t1 | MTR_1g106085 | 51.556 | 514 | 243 | 3 | 36 | 546 | 16 | 526 | 0.0 | 527 |
MS.gene062755.t1 | MTR_8g086520 | 57.788 | 443 | 187 | 0 | 35 | 477 | 12 | 454 | 0.0 | 527 |
MS.gene062755.t1 | MTR_3g103230 | 49.231 | 520 | 254 | 4 | 32 | 546 | 39 | 553 | 1.81e-177 | 512 |
MS.gene062755.t1 | MTR_5g035180 | 48.113 | 530 | 267 | 4 | 21 | 546 | 12 | 537 | 6.28e-177 | 510 |
MS.gene062755.t1 | MTR_4g106750 | 51.240 | 484 | 230 | 3 | 67 | 546 | 1 | 482 | 4.55e-172 | 496 |
MS.gene062755.t1 | MTR_8g086520 | 57.855 | 401 | 169 | 0 | 145 | 545 | 6 | 406 | 4.59e-172 | 493 |
MS.gene062755.t1 | MTR_5g022110 | 49.708 | 513 | 249 | 3 | 38 | 546 | 39 | 546 | 1.01e-171 | 497 |
MS.gene062755.t1 | MTR_8g086520 | 58.462 | 390 | 162 | 0 | 35 | 424 | 12 | 401 | 2.74e-162 | 468 |
MS.gene062755.t1 | MTR_4g106750 | 51.226 | 367 | 177 | 1 | 182 | 546 | 13 | 379 | 8.95e-131 | 386 |
MS.gene062755.t1 | MTR_2g084895 | 35.327 | 535 | 304 | 9 | 42 | 540 | 146 | 674 | 1.64e-101 | 321 |
MS.gene062755.t1 | MTR_8g068550 | 32.083 | 533 | 326 | 4 | 42 | 542 | 225 | 753 | 2.26e-94 | 304 |
MS.gene062755.t1 | MTR_4g055290 | 33.395 | 539 | 312 | 8 | 37 | 539 | 148 | 675 | 7.12e-93 | 298 |
MS.gene062755.t1 | MTR_2g103510 | 34.291 | 522 | 297 | 11 | 43 | 547 | 94 | 586 | 2.34e-91 | 292 |
MS.gene062755.t1 | MTR_5g032020 | 32.959 | 534 | 318 | 5 | 42 | 541 | 167 | 694 | 2.57e-89 | 290 |
MS.gene062755.t1 | MTR_8g086535 | 65.000 | 100 | 35 | 0 | 325 | 424 | 18 | 117 | 1.23e-35 | 129 |
MS.gene062755.t1 | MTR_5g042660 | 53.571 | 56 | 26 | 0 | 478 | 533 | 39 | 94 | 9.57e-15 | 70.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062755.t1 | AT2G26510 | 69.754 | 529 | 159 | 1 | 22 | 549 | 23 | 551 | 0.0 | 744 |
MS.gene062755.t1 | AT2G34190 | 55.686 | 510 | 226 | 0 | 36 | 545 | 13 | 522 | 0.0 | 604 |
MS.gene062755.t1 | AT2G05760 | 56.360 | 511 | 222 | 1 | 36 | 545 | 8 | 518 | 0.0 | 601 |
MS.gene062755.t1 | AT5G62890 | 50.279 | 537 | 253 | 2 | 12 | 546 | 7 | 531 | 0.0 | 536 |
MS.gene062755.t1 | AT5G62890 | 50.279 | 537 | 253 | 2 | 12 | 546 | 7 | 531 | 0.0 | 536 |
MS.gene062755.t1 | AT5G62890 | 50.279 | 537 | 253 | 2 | 12 | 546 | 7 | 531 | 0.0 | 536 |
MS.gene062755.t1 | AT1G60030 | 49.053 | 528 | 264 | 2 | 21 | 546 | 13 | 537 | 0.0 | 530 |
MS.gene062755.t1 | AT2G26510 | 70.557 | 377 | 111 | 0 | 22 | 398 | 23 | 399 | 0.0 | 523 |
MS.gene062755.t1 | AT2G26510 | 70.879 | 364 | 106 | 0 | 22 | 385 | 23 | 386 | 2.98e-179 | 512 |
MS.gene062755.t1 | AT5G49990 | 51.267 | 513 | 248 | 1 | 36 | 546 | 15 | 527 | 6.84e-178 | 512 |
MS.gene062755.t1 | AT5G49990 | 51.267 | 513 | 248 | 1 | 36 | 546 | 15 | 527 | 6.84e-178 | 512 |
MS.gene062755.t1 | AT5G49990 | 51.267 | 513 | 248 | 1 | 36 | 546 | 15 | 527 | 6.84e-178 | 512 |
MS.gene062755.t1 | AT5G49990 | 51.267 | 513 | 248 | 1 | 36 | 546 | 15 | 527 | 6.84e-178 | 512 |
MS.gene062755.t1 | AT1G10540 | 48.218 | 533 | 264 | 6 | 21 | 546 | 11 | 538 | 2.38e-176 | 509 |
MS.gene062755.t1 | AT1G49960 | 50.489 | 511 | 251 | 1 | 38 | 546 | 15 | 525 | 6.63e-168 | 486 |
MS.gene062755.t1 | AT1G65550 | 46.525 | 518 | 266 | 3 | 38 | 546 | 25 | 540 | 4.32e-164 | 478 |
MS.gene062755.t1 | AT5G62890 | 50.429 | 466 | 219 | 1 | 12 | 477 | 7 | 460 | 1.40e-160 | 466 |
MS.gene062755.t1 | AT1G10540 | 46.997 | 383 | 193 | 5 | 21 | 398 | 11 | 388 | 4.98e-119 | 357 |
MS.gene062755.t1 | AT5G25420 | 40.995 | 422 | 181 | 5 | 38 | 459 | 37 | 390 | 2.13e-100 | 310 |
MS.gene062755.t1 | AT2G27810 | 33.520 | 537 | 320 | 6 | 41 | 543 | 167 | 700 | 9.07e-93 | 299 |
MS.gene062755.t1 | AT2G27810 | 32.086 | 561 | 320 | 7 | 41 | 543 | 167 | 724 | 2.65e-87 | 285 |
MS.gene062755.t1 | AT4G38050 | 31.285 | 537 | 333 | 4 | 43 | 547 | 175 | 707 | 3.05e-81 | 268 |
MS.gene062755.t1 | AT2G27810 | 36.085 | 424 | 252 | 3 | 41 | 446 | 167 | 589 | 9.30e-80 | 261 |
MS.gene062755.t1 | AT2G27810 | 36.340 | 377 | 221 | 3 | 41 | 399 | 167 | 542 | 4.14e-68 | 229 |
Find 156 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCGCCGCAGCCAGGCTTTC+TGG | 0.141398 | 1.4:+3135312 | MS.gene062755:CDS |
TTATCTGCATTGCCGTTATT+TGG | 0.173804 | 1.4:+3134415 | MS.gene062755:CDS |
GGACCACCACCTCAGAATTT+TGG | 0.200219 | 1.4:+3132566 | MS.gene062755:CDS |
TTCAAGGCTTCCGGTGATTA+TGG | 0.205728 | 1.4:+3133425 | MS.gene062755:CDS |
GCCGCTATCCTTACCGTTGC+TGG | 0.267986 | 1.4:+3134444 | MS.gene062755:CDS |
CAGCCGAAGCATCGGGCTTC+AGG | 0.280020 | 1.4:+3135362 | MS.gene062755:CDS |
TGCAGCTGAAGCATTGCTTT+TGG | 0.280132 | 1.4:+3133075 | MS.gene062755:intron |
CTATCTCCTGCAGCTGCTAC+TGG | 0.282930 | 1.4:+3136161 | MS.gene062755:intron |
TTCAAAGCTAGTCATGTCTT+TGG | 0.283918 | 1.4:+3134927 | MS.gene062755:CDS |
GACATGACTAGCTTTGAATA+TGG | 0.296354 | 1.4:-3134922 | None:intergenic |
TTCAGACTTGGTTTGGTTCA+AGG | 0.300502 | 1.4:+3133409 | MS.gene062755:CDS |
AACTTTCGCATCTGAGAATC+AGG | 0.310869 | 1.4:+3133506 | MS.gene062755:CDS |
TTCGGCTTAACCTTGTTTCT+CGG | 0.314131 | 1.4:+3136236 | MS.gene062755:CDS |
TCTGTCCACAGCTGTTTGTT+TGG | 0.324863 | 1.4:-3136636 | None:intergenic |
CAGTATATAGCAGCGAATAT+TGG | 0.336373 | 1.4:-3136039 | None:intergenic |
TTGGTTTGGTTCAAGGCTTC+CGG | 0.345806 | 1.4:+3133416 | MS.gene062755:CDS |
TATCTGCATTGCCGTTATTT+GGG | 0.347060 | 1.4:+3134416 | MS.gene062755:CDS |
TCAAGGCTTCCGGTGATTAT+GGG | 0.354222 | 1.4:+3133426 | MS.gene062755:CDS |
GCATCCATTCAAATCCTTCA+TGG | 0.366156 | 1.4:+3132645 | MS.gene062755:CDS |
GAAAACATAGATATTCCTTA+TGG | 0.375416 | 1.4:-3136216 | None:intergenic |
ATGTCTATTTCAGGTAAATT+CGG | 0.375930 | 1.4:+3135991 | MS.gene062755:intron |
CAGACATTGTTGTTTATGTC+TGG | 0.378631 | 1.4:+3133372 | MS.gene062755:CDS |
CATCCACCATTGGTTCTAAC+TGG | 0.379887 | 1.4:-3136311 | None:intergenic |
GATTCTCAGATGCGAAAGTT+TGG | 0.384482 | 1.4:-3133503 | None:intergenic |
GAGAGGAATTGATGCGAAAA+AGG | 0.386029 | 1.4:-3136016 | None:intergenic |
AGTATATAGCAGCGAATATT+GGG | 0.387392 | 1.4:-3136038 | None:intergenic |
AAGCAACCTTGTACCTCAAA+TGG | 0.396389 | 1.4:+3133144 | MS.gene062755:CDS |
AGCACTTGTCACTTCTTTCG+AGG | 0.406623 | 1.4:+3134962 | MS.gene062755:CDS |
TCAAAGCTAGTCATGTCTTT+GGG | 0.407287 | 1.4:+3134928 | MS.gene062755:CDS |
GGCATTTGTGGCTCTATTGT+TGG | 0.413169 | 1.4:+3135497 | MS.gene062755:CDS |
CCTGAACTGACGGTGGTGCT+TGG | 0.414463 | 1.4:-3132532 | None:intergenic |
GACTTTCAAGGGGTCCCACT+TGG | 0.421667 | 1.4:+3132588 | MS.gene062755:CDS |
CAGCACTACATTGTGATGCT+TGG | 0.426352 | 1.4:+3133103 | MS.gene062755:CDS |
ACATTGCTTCAGACTTGGTT+TGG | 0.426916 | 1.4:+3133402 | MS.gene062755:CDS |
TCGGCTTAACCTTGTTTCTC+GGG | 0.432455 | 1.4:+3136237 | MS.gene062755:CDS |
ACATGACTAGCTTTGAATAT+GGG | 0.438479 | 1.4:-3134921 | None:intergenic |
ACATGACTCCCACCCATTTG+AGG | 0.442621 | 1.4:-3133157 | None:intergenic |
TACTCGGTCTCACACACATT+GGG | 0.444707 | 1.4:+3135833 | MS.gene062755:CDS |
TAGTCATGTCTTTGGGATGA+TGG | 0.446341 | 1.4:+3134935 | MS.gene062755:CDS |
CAGACATAAACAACAATGTC+TGG | 0.448314 | 1.4:-3133371 | None:intergenic |
CCAACTGTGGCAATAATAGT+TGG | 0.450422 | 1.4:+3136587 | MS.gene062755:CDS |
GGGTGTTGCACCAGAAAGCC+TGG | 0.450632 | 1.4:-3135322 | None:intergenic |
GGTGGGTTCCTTTCCAGAAA+AGG | 0.452846 | 1.4:+3136669 | MS.gene062755:CDS |
CCAAGCACCACCGTCAGTTC+AGG | 0.456536 | 1.4:+3132532 | MS.gene062755:CDS |
ATGTGCTCAGCCGAAGCATC+GGG | 0.457152 | 1.4:+3135355 | MS.gene062755:CDS |
TGAGGTGGTGGTCCCGGTGG+CGG | 0.457958 | 1.4:-3132557 | None:intergenic |
TCTGCTGATTGTAACACAAC+AGG | 0.459246 | 1.4:+3134255 | MS.gene062755:CDS |
ACTATTATTGCCACAGTTGG+TGG | 0.463983 | 1.4:-3136584 | None:intergenic |
TACACAATTAGAACAATTCA+AGG | 0.469316 | 1.4:+3133812 | MS.gene062755:CDS |
AGTTGGTGGAGATGAGAATA+TGG | 0.469785 | 1.4:-3136570 | None:intergenic |
ATGCTGATTGAAGGCATTTG+TGG | 0.474680 | 1.4:+3135485 | MS.gene062755:CDS |
AGCTGAAGAAGCTGTTCAGC+TGG | 0.475988 | 1.4:-3132614 | None:intergenic |
TTGCAAATAACAATTCCATA+AGG | 0.480068 | 1.4:+3136201 | MS.gene062755:CDS |
GTCAGTTCAGGCACCGCCAC+CGG | 0.482612 | 1.4:+3132544 | MS.gene062755:CDS |
GTGGTATGTGTGGTTGGACT+CGG | 0.482699 | 1.4:+3134070 | MS.gene062755:CDS |
TATCTCCTGCAGCTGCTACT+GGG | 0.483276 | 1.4:+3136162 | MS.gene062755:intron |
TCACCTGAAGCCCGATGCTT+CGG | 0.483967 | 1.4:-3135365 | None:intergenic |
CTGAGCACATGTGCCGGAGG+GGG | 0.486945 | 1.4:-3135342 | None:intergenic |
GTACTTTCTTCGCCGCAGCC+AGG | 0.487390 | 1.4:+3135304 | MS.gene062755:CDS |
GGCATTAGCATGCTGATTGA+AGG | 0.489200 | 1.4:+3135476 | MS.gene062755:CDS |
ATCACTTGCTTTCTATCTAC+CGG | 0.489632 | 1.4:+3133452 | MS.gene062755:CDS |
CTAACTGGACCATGACCATC+AGG | 0.492436 | 1.4:-3136296 | None:intergenic |
CATGTGCTCAGCCGAAGCAT+CGG | 0.494578 | 1.4:+3135354 | MS.gene062755:CDS |
TCAACACATTGCTTCAGACT+TGG | 0.504520 | 1.4:+3133397 | MS.gene062755:CDS |
CGGCTGAGCACATGTGCCGG+AGG | 0.507745 | 1.4:-3135345 | None:intergenic |
AAATTCTGAGGTGGTGGTCC+CGG | 0.508298 | 1.4:-3132563 | None:intergenic |
TGCACCAGAAAGCCTGGCTG+CGG | 0.513047 | 1.4:-3135316 | None:intergenic |
CAGTTAGAACCAATGGTGGA+TGG | 0.514008 | 1.4:+3136312 | MS.gene062755:CDS |
TCCCATTGTCATTGTACCTG+TGG | 0.514468 | 1.4:+3134051 | MS.gene062755:CDS |
GGCTGAGCACATGTGCCGGA+GGG | 0.515040 | 1.4:-3135344 | None:intergenic |
CTTCGGCTGAGCACATGTGC+CGG | 0.519002 | 1.4:-3135348 | None:intergenic |
TAGGAATATATTCAGACAAA+CGG | 0.520368 | 1.4:-3136733 | None:intergenic |
TATTCCTAGTAGATTTCTCT+AGG | 0.521140 | 1.4:+3136748 | MS.gene062755:CDS |
ACCACAGGTACAATGACAAT+GGG | 0.521905 | 1.4:-3134052 | None:intergenic |
TGGACTCGGTCTGTTCGCGA+GGG | 0.523642 | 1.4:+3134084 | MS.gene062755:CDS |
TGCTACATACCATGGTGCAC+GGG | 0.526388 | 1.4:-3134532 | None:intergenic |
GAACTGACGGTGGTGCTTGG+TGG | 0.527613 | 1.4:-3132529 | None:intergenic |
AGCAACCTTGTACCTCAAAT+GGG | 0.529370 | 1.4:+3133145 | MS.gene062755:CDS |
AGTCATGTCTTTGGGATGAT+GGG | 0.533189 | 1.4:+3134936 | MS.gene062755:CDS |
TTGCTACATACCATGGTGCA+CGG | 0.537859 | 1.4:-3134533 | None:intergenic |
TTTGAAGCACCTTCATGCTA+AGG | 0.538653 | 1.4:+3134362 | MS.gene062755:CDS |
GTGACTTACCCATCCACCAT+TGG | 0.539247 | 1.4:-3136321 | None:intergenic |
CATGACTAGCTTTGAATATG+GGG | 0.540448 | 1.4:-3134920 | None:intergenic |
GTTCGCGAGGGGCTTTCCAA+TGG | 0.542911 | 1.4:+3134096 | MS.gene062755:CDS |
ACCATGGTGCACGGGTCAGA+AGG | 0.543944 | 1.4:-3134524 | None:intergenic |
ACAATCAGCAGAAGGAGCAT+AGG | 0.544491 | 1.4:-3134244 | None:intergenic |
TTGGACTCGGTCTGTTCGCG+AGG | 0.546006 | 1.4:+3134083 | MS.gene062755:CDS |
AGTGAAAATGTCGGTCTACT+CGG | 0.546301 | 1.4:+3135817 | MS.gene062755:intron |
CAACTGTGGCAATAATAGTT+GGG | 0.546683 | 1.4:+3136588 | MS.gene062755:CDS |
CATGGTCCAGTTAGAACCAA+TGG | 0.547851 | 1.4:+3136305 | MS.gene062755:CDS |
TCCCACCCATTTGAGGTACA+AGG | 0.549191 | 1.4:-3133150 | None:intergenic |
AGTCCAAAATTCTGAGGTGG+TGG | 0.551027 | 1.4:-3132569 | None:intergenic |
GTACCTGTGGTATGTGTGGT+TGG | 0.555163 | 1.4:+3134064 | MS.gene062755:CDS |
GCTGAGCACATGTGCCGGAG+GGG | 0.557764 | 1.4:-3135343 | None:intergenic |
AGGCTTCCGGTGATTATGGG+TGG | 0.559262 | 1.4:+3133429 | MS.gene062755:CDS |
ATATCTTCCTTGGATATAGT+AGG | 0.561320 | 1.4:+3133861 | MS.gene062755:CDS |
TATTCCTAGAGAAATCTACT+AGG | 0.561420 | 1.4:-3136752 | None:intergenic |
TCCTTGGATATAGTAGGACA+TGG | 0.564119 | 1.4:+3133867 | MS.gene062755:CDS |
AACGCCATGAAGGATTTGAA+TGG | 0.564370 | 1.4:-3132649 | None:intergenic |
GTACCCCACTGAAATGGGTA+TGG | 0.565676 | 1.4:-3134897 | None:intergenic |
AGCGGCGAAAGCCCAAATAA+CGG | 0.565764 | 1.4:-3134427 | None:intergenic |
CCAACTATTATTGCCACAGT+TGG | 0.566946 | 1.4:-3136587 | None:intergenic |
TATGATGAGCCTTAGCATGA+AGG | 0.568732 | 1.4:-3134371 | None:intergenic |
ATGTTCCATACCCATTTCAG+TGG | 0.568754 | 1.4:+3134892 | MS.gene062755:CDS |
TCAGTTCAGGCACCGCCACC+GGG | 0.569461 | 1.4:+3132545 | MS.gene062755:CDS |
AGTTAGAACCAATGGTGGAT+GGG | 0.570107 | 1.4:+3136313 | MS.gene062755:CDS |
GGTGGCGGTGCCTGAACTGA+CGG | 0.570549 | 1.4:-3132542 | None:intergenic |
ACCTTGTACCTCAAATGGGT+GGG | 0.574764 | 1.4:+3133149 | MS.gene062755:CDS |
AAAAGATACTAACGCCATGA+AGG | 0.576140 | 1.4:-3132659 | None:intergenic |
GGTTCCTTTCCAGAAAAGGA+AGG | 0.579848 | 1.4:+3136673 | MS.gene062755:CDS |
TGTATGCACCAGCAACGGTA+AGG | 0.580085 | 1.4:-3134452 | None:intergenic |
TGTTCCATACCCATTTCAGT+GGG | 0.582233 | 1.4:+3134893 | MS.gene062755:CDS |
AACCTTGTACCTCAAATGGG+TGG | 0.584925 | 1.4:+3133148 | MS.gene062755:CDS |
TTCTGGAAAGGAACCCACCA+TGG | 0.587333 | 1.4:-3136665 | None:intergenic |
TTCTGAGGTGGTGGTCCCGG+TGG | 0.588875 | 1.4:-3132560 | None:intergenic |
CCTTGGATATAGTAGGACAT+GGG | 0.589670 | 1.4:+3133868 | MS.gene062755:CDS |
CTTGCAGATTGTGTGCAGAT+CGG | 0.590049 | 1.4:+3134217 | MS.gene062755:CDS |
GATAATTGTAGTGAAAATGT+CGG | 0.591973 | 1.4:+3135808 | MS.gene062755:intron |
AGGCTCATCATATACTTGAG+AGG | 0.595130 | 1.4:+3134382 | MS.gene062755:CDS |
TACCACAGGTACAATGACAA+TGG | 0.595377 | 1.4:-3134053 | None:intergenic |
CCCATGTCCTACTATATCCA+AGG | 0.596457 | 1.4:-3133868 | None:intergenic |
TCATTTATGATCGACATCAC+CGG | 0.597681 | 1.4:-3133471 | None:intergenic |
GGACTCGGTCTGTTCGCGAG+GGG | 0.599513 | 1.4:+3134085 | MS.gene062755:CDS |
CTACTCGGTCTCACACACAT+TGG | 0.599743 | 1.4:+3135832 | MS.gene062755:CDS |
TGGACAGAGGACTTCCATGG+TGG | 0.609884 | 1.4:+3136651 | MS.gene062755:CDS |
GGACAGAGGACTTCCATGGT+GGG | 0.611007 | 1.4:+3136652 | MS.gene062755:CDS |
AGTGATCCACCCATAATCAC+CGG | 0.611658 | 1.4:-3133435 | None:intergenic |
CATTGTACCTGTGGTATGTG+TGG | 0.617786 | 1.4:+3134060 | MS.gene062755:CDS |
AGTATTGTATGCACCAGCAA+CGG | 0.621068 | 1.4:-3134457 | None:intergenic |
GGCTGCGGCGAAGAAAGTAC+CGG | 0.621910 | 1.4:-3135301 | None:intergenic |
CTTGAAAGTCCAAAATTCTG+AGG | 0.626530 | 1.4:-3132575 | None:intergenic |
TGTTCAGCTGGAGTCCAAGT+GGG | 0.628708 | 1.4:-3132602 | None:intergenic |
CTGTTCAGCTGGAGTCCAAG+TGG | 0.629085 | 1.4:-3132603 | None:intergenic |
GTTCCTTTCCAGAAAAGGAA+GGG | 0.629131 | 1.4:+3136674 | MS.gene062755:CDS |
ATAGCAGCGAATATTGGGAG+AGG | 0.630706 | 1.4:-3136033 | None:intergenic |
CTGTGGACAGAGGACTTCCA+TGG | 0.638844 | 1.4:+3136648 | MS.gene062755:CDS |
ACCAGCAACGGTAAGGATAG+CGG | 0.639172 | 1.4:-3134445 | None:intergenic |
GTCATGAACACTGCACCTGA+TGG | 0.642428 | 1.4:+3136281 | MS.gene062755:CDS |
GTGTTCATGACAAAATATTG+TGG | 0.643236 | 1.4:-3136269 | None:intergenic |
CTTGGATATAGTAGGACATG+GGG | 0.644457 | 1.4:+3133869 | MS.gene062755:CDS |
GGTCCAGTTAGAACCAATGG+TGG | 0.646071 | 1.4:+3136308 | MS.gene062755:CDS |
ATTCTCATCTCCACCAACTG+TGG | 0.646273 | 1.4:+3136574 | MS.gene062755:CDS |
AATTGAGATCCCGAGAAACA+AGG | 0.647055 | 1.4:-3136246 | None:intergenic |
TGAAGCCAAACAAACAGCTG+TGG | 0.648330 | 1.4:+3136631 | MS.gene062755:CDS |
GAAAGTCCAAAATTCTGAGG+TGG | 0.648379 | 1.4:-3132572 | None:intergenic |
ACACATTGGGAGCAGAAGAG+TGG | 0.649258 | 1.4:+3135846 | MS.gene062755:CDS |
ACCTTCTGACCCGTGCACCA+TGG | 0.650262 | 1.4:+3134523 | MS.gene062755:CDS |
AGTCCAACCACACATACCAC+AGG | 0.653099 | 1.4:-3134067 | None:intergenic |
AAACAAACAGCTGTGGACAG+AGG | 0.674809 | 1.4:+3136638 | MS.gene062755:CDS |
GTTGTGTTACAATCAGCAGA+AGG | 0.677477 | 1.4:-3134252 | None:intergenic |
AACACTGCACCTGATGGTCA+TGG | 0.680577 | 1.4:+3136287 | MS.gene062755:CDS |
ATGACTAGCTTTGAATATGG+GGG | 0.701834 | 1.4:-3134919 | None:intergenic |
GGCGGTGCCTGAACTGACGG+TGG | 0.713228 | 1.4:-3132539 | None:intergenic |
GTTCCATACCCATTTCAGTG+GGG | 0.714740 | 1.4:+3134894 | MS.gene062755:CDS |
ATATATTCAGACAAACGGAG+AGG | 0.715929 | 1.4:-3136728 | None:intergenic |
AGAGTGGTGCAAATGTCATG+TGG | 0.748681 | 1.4:+3135862 | MS.gene062755:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTATTTTTATTTTTTT+GGG | + | chr1.4:3132999-3133018 | MS.gene062755:intron | 0.0% |
!!! | TTTTTTTATTTTTATTTTTT+TGG | + | chr1.4:3132998-3133017 | MS.gene062755:intron | 0.0% |
!! | AATTAAAAATACTAAGAATA+AGG | - | chr1.4:3135001-3135020 | None:intergenic | 10.0% |
!! | TCAAAATTTCATTAAAATAA+TGG | - | chr1.4:3135271-3135290 | None:intergenic | 10.0% |
!!! | AAATTGAAATTTTTAGAATT+TGG | - | chr1.4:3133645-3133664 | None:intergenic | 10.0% |
!!! | AATTGAAATTTTTAGAATTT+GGG | - | chr1.4:3133644-3133663 | None:intergenic | 10.0% |
!!! | TAATTTTTTTTTACAAGTTA+AGG | - | chr1.4:3132755-3132774 | None:intergenic | 10.0% |
!! | AATTAAGTTAATTCTTCAAA+TGG | - | chr1.4:3135406-3135425 | None:intergenic | 15.0% |
!! | AATTCTTAACAAATAATCAA+TGG | - | chr1.4:3135757-3135776 | None:intergenic | 15.0% |
!! | ACTATAATAAAAGTTTGAAA+TGG | + | chr1.4:3134159-3134178 | MS.gene062755:intron | 15.0% |
!!! | GTTTATTAGTTAATATCTTT+TGG | + | chr1.4:3133960-3133979 | MS.gene062755:intron | 15.0% |
!!! | TCTTAGTATTTTTAATTCTA+CGG | + | chr1.4:3135004-3135023 | MS.gene062755:intron | 15.0% |
!!! | TTAAATATTGATTATAGACA+TGG | + | chr1.4:3135729-3135748 | MS.gene062755:intron | 15.0% |
!!! | TTTCAAACTTTTATTATAGT+AGG | - | chr1.4:3134159-3134178 | None:intergenic | 15.0% |
!!! | TTTTTTAAAAAAAGTTGCTT+TGG | + | chr1.4:3132909-3132928 | MS.gene062755:intron | 15.0% |
!! | ACATATATGAAAATGACAAA+AGG | - | chr1.4:3136412-3136431 | None:intergenic | 20.0% |
!! | ATAAGTTTATATGTTTGTAG+AGG | + | chr1.4:3133603-3133622 | MS.gene062755:intron | 20.0% |
!! | ATAATTTAATGTGCATGTAA+TGG | - | chr1.4:3136098-3136117 | None:intergenic | 20.0% |
!! | ATGAAAACATATTGTGATTT+CGG | + | chr1.4:3133544-3133563 | MS.gene062755:intron | 20.0% |
!! | CAAACATATAAACTTATGTT+CGG | - | chr1.4:3133600-3133619 | None:intergenic | 20.0% |
!! | CATATATGAAAATGACAAAA+GGG | - | chr1.4:3136411-3136430 | None:intergenic | 20.0% |
!! | CATTAAAATAATGGTAGTAT+AGG | - | chr1.4:3135262-3135281 | None:intergenic | 20.0% |
!! | TAGCAAAAGTAGTATATTTA+GGG | + | chr1.4:3134550-3134569 | MS.gene062755:intron | 20.0% |
!!! | AAATTTTTAGAATTTGGGTT+GGG | - | chr1.4:3133639-3133658 | None:intergenic | 20.0% |
!!! | AACAATTATGTTTTTATTCC+AGG | + | chr1.4:3134865-3134884 | MS.gene062755:intron | 20.0% |
!!! | ATAAGGAATATCTATGTTTT+CGG | + | chr1.4:3136218-3136237 | MS.gene062755:CDS | 20.0% |
!!! | ATGATTTTATGCTCTATTTT+TGG | + | chr1.4:3135889-3135908 | MS.gene062755:CDS | 20.0% |
!!! | ATTAAACTTTTTTTCCAAAC+AGG | + | chr1.4:3134792-3134811 | MS.gene062755:intron | 20.0% |
!!! | CTTATGTATAAGCTATTTTT+AGG | - | chr1.4:3134764-3134783 | None:intergenic | 20.0% |
!!! | GTAATTGTTGTTTTTTGTAA+CGG | + | chr1.4:3133245-3133264 | MS.gene062755:intron | 20.0% |
! | AAAAAATGTGAATTTGCCAA+TGG | - | chr1.4:3135661-3135680 | None:intergenic | 25.0% |
! | AAAAATGTGAATTTGCCAAT+GGG | - | chr1.4:3135660-3135679 | None:intergenic | 25.0% |
! | AAACTCATAAGTGAATGTTT+CGG | - | chr1.4:3134294-3134313 | None:intergenic | 25.0% |
! | ACAATAACAACAACAAAATC+AGG | - | chr1.4:3133324-3133343 | None:intergenic | 25.0% |
! | ACAGAATCAAACTAGAATAA+AGG | - | chr1.4:3132888-3132907 | None:intergenic | 25.0% |
! | ATTACACTTCAATTCTTGTT+TGG | + | chr1.4:3135920-3135939 | MS.gene062755:intron | 25.0% |
! | GAAAACATAGATATTCCTTA+TGG | - | chr1.4:3136219-3136238 | None:intergenic | 25.0% |
! | GATAATTGTAGTGAAAATGT+CGG | + | chr1.4:3135808-3135827 | MS.gene062755:intron | 25.0% |
! | GATAGAGAGATAATTGTATA+AGG | - | chr1.4:3136146-3136165 | None:intergenic | 25.0% |
! | GTAGCAAAAGTAGTATATTT+AGG | + | chr1.4:3134549-3134568 | MS.gene062755:intron | 25.0% |
! | GTCTCTCATTATATGAAATA+AGG | + | chr1.4:3133573-3133592 | MS.gene062755:intron | 25.0% |
! | TAAGTAACATTTAAGTGCAA+TGG | - | chr1.4:3135952-3135971 | None:intergenic | 25.0% |
! | TACACAATTAGAACAATTCA+AGG | + | chr1.4:3133812-3133831 | MS.gene062755:CDS | 25.0% |
! | TAGGAATATATTCAGACAAA+CGG | - | chr1.4:3136736-3136755 | None:intergenic | 25.0% |
! | TATAGTAGGTAATTTATTCG+TGG | - | chr1.4:3134145-3134164 | None:intergenic | 25.0% |
! | TATATGTTAAGAAAAGTAGC+CGG | + | chr1.4:3136425-3136444 | MS.gene062755:intron | 25.0% |
! | TATTTAACCAAATAAAACCC+AGG | - | chr1.4:3135716-3135735 | None:intergenic | 25.0% |
! | TTGCAAATAACAATTCCATA+AGG | + | chr1.4:3136201-3136220 | MS.gene062755:CDS | 25.0% |
!! | ACTTATTTGAGTCTTTTCTT+TGG | - | chr1.4:3134484-3134503 | None:intergenic | 25.0% |
!! | ATGTCTATTTCAGGTAAATT+CGG | + | chr1.4:3135991-3136010 | MS.gene062755:intron | 25.0% |
!! | CTTGTAACTTTTGTGATATA+GGG | + | chr1.4:3135455-3135474 | MS.gene062755:intron | 25.0% |
!! | TAGTATATTTAGGGTCTATT+TGG | + | chr1.4:3134559-3134578 | MS.gene062755:intron | 25.0% |
!! | TTGAATCACCAATTTTATGT+TGG | - | chr1.4:3133750-3133769 | None:intergenic | 25.0% |
!! | TTTCTCTCTTTATCATCTTT+TGG | + | chr1.4:3133991-3134010 | MS.gene062755:intron | 25.0% |
!!! | AATTTTTAGAATTTGGGTTG+GGG | - | chr1.4:3133638-3133657 | None:intergenic | 25.0% |
!!! | ATGTTAGTATTGCTAGTTTT+TGG | + | chr1.4:3133271-3133290 | MS.gene062755:intron | 25.0% |
!!! | GAAATTTTTAGAATTTGGGT+TGG | - | chr1.4:3133640-3133659 | None:intergenic | 25.0% |
!!! | GCTATATACTGTGTTTTATT+CGG | + | chr1.4:3136051-3136070 | MS.gene062755:CDS | 25.0% |
!!! | TTTTTTTCTCTTTCTTTACC+AGG | + | chr1.4:3134020-3134039 | MS.gene062755:intron | 25.0% |
AAATAGACACATAAATACGC+CGG | - | chr1.4:3136447-3136466 | None:intergenic | 30.0% | |
AATACGCTGAAAACAACTTA+TGG | - | chr1.4:3134667-3134686 | None:intergenic | 30.0% | |
ACAAAAGGGACTTGTAAAAA+GGG | - | chr1.4:3136397-3136416 | None:intergenic | 30.0% | |
AGTATATAGCAGCGAATATT+GGG | - | chr1.4:3136041-3136060 | None:intergenic | 30.0% | |
AGTTTATATGTTTGTAGAGG+TGG | + | chr1.4:3133606-3133625 | MS.gene062755:intron | 30.0% | |
ATATCTTCCTTGGATATAGT+AGG | + | chr1.4:3133861-3133880 | MS.gene062755:CDS | 30.0% | |
ATTTAATGTGCATGTAATGG+TGG | - | chr1.4:3136095-3136114 | None:intergenic | 30.0% | |
CCTATATCACAAAAGTTACA+AGG | - | chr1.4:3135457-3135476 | None:intergenic | 30.0% | |
GAACTTGAACAGTTAAATTG+AGG | - | chr1.4:3134819-3134838 | None:intergenic | 30.0% | |
GAATTTACCTGAAATAGACA+TGG | - | chr1.4:3135992-3136011 | None:intergenic | 30.0% | |
GATCACTTGATGAAAAAGAT+TGG | + | chr1.4:3133193-3133212 | MS.gene062755:intron | 30.0% | |
GTGTTCATGACAAAATATTG+TGG | - | chr1.4:3136272-3136291 | None:intergenic | 30.0% | |
TGCTTTGTCCAACATAAAAT+TGG | + | chr1.4:3133739-3133758 | MS.gene062755:intron | 30.0% | |
TTTAATGTAGCTACATGTGT+CGG | + | chr1.4:3135114-3135133 | MS.gene062755:intron | 30.0% | |
! | AAATTTTGAATGCAGTCAAC+CGG | + | chr1.4:3135282-3135301 | MS.gene062755:intron | 30.0% |
! | AATTTTACAGCTTCATTCTC+TGG | + | chr1.4:3135213-3135232 | MS.gene062755:intron | 30.0% |
! | ACAACAACCTTTTACATTTC+CGG | + | chr1.4:3134329-3134348 | MS.gene062755:intron | 30.0% |
! | ATGTTGCTAAAATACCGTTT+TGG | + | chr1.4:3136476-3136495 | MS.gene062755:intron | 30.0% |
! | CCTTGTAACTTTTGTGATAT+AGG | + | chr1.4:3135454-3135473 | MS.gene062755:intron | 30.0% |
! | GATTTTTCCATGTCTATTTC+AGG | + | chr1.4:3135982-3136001 | MS.gene062755:intron | 30.0% |
! | TCAGAATTTTGGACTTTCAA+GGG | + | chr1.4:3132577-3132596 | MS.gene062755:CDS | 30.0% |
! | TCTTTTGTCAATATCTTCCT+TGG | + | chr1.4:3133851-3133870 | MS.gene062755:CDS | 30.0% |
! | TTATGTTTAGTGTTCTGAGT+AGG | + | chr1.4:3135570-3135589 | MS.gene062755:intron | 30.0% |
!! | ACATGACTAGCTTTGAATAT+GGG | - | chr1.4:3134924-3134943 | None:intergenic | 30.0% |
!! | TATTGTTTTGTAGCACGATA+AGG | + | chr1.4:3133338-3133357 | MS.gene062755:intron | 30.0% |
!!! | GTATTGCTAGTTTTTGGTAA+TGG | + | chr1.4:3133277-3133296 | MS.gene062755:intron | 30.0% |
AAAAGATACTAACGCCATGA+AGG | - | chr1.4:3132662-3132681 | None:intergenic | 35.0% | |
AGTTAAATTGAGGTCCTGTT+TGG | - | chr1.4:3134809-3134828 | None:intergenic | 35.0% | |
ATATATTCAGACAAACGGAG+AGG | - | chr1.4:3136731-3136750 | None:intergenic | 35.0% | |
ATCACTTGCTTTCTATCTAC+CGG | + | chr1.4:3133452-3133471 | MS.gene062755:CDS | 35.0% | |
CAACTGTGGCAATAATAGTT+GGG | + | chr1.4:3136588-3136607 | MS.gene062755:CDS | 35.0% | |
CAGACATAAACAACAATGTC+TGG | - | chr1.4:3133374-3133393 | None:intergenic | 35.0% | |
CAGTATATAGCAGCGAATAT+TGG | - | chr1.4:3136042-3136061 | None:intergenic | 35.0% | |
CTTGAAAGTCCAAAATTCTG+AGG | - | chr1.4:3132578-3132597 | None:intergenic | 35.0% | |
GAAAACAACTTATGGACATG+AGG | - | chr1.4:3134659-3134678 | None:intergenic | 35.0% | |
GACAAAAGGGACTTGTAAAA+AGG | - | chr1.4:3136398-3136417 | None:intergenic | 35.0% | |
TATCTGCATTGCCGTTATTT+GGG | + | chr1.4:3134416-3134435 | MS.gene062755:CDS | 35.0% | |
TATGTAGCACTTCAGATCAA+AGG | - | chr1.4:3135175-3135194 | None:intergenic | 35.0% | |
TCAAAGCTAGTCATGTCTTT+GGG | + | chr1.4:3134928-3134947 | MS.gene062755:CDS | 35.0% | |
TCATTTATGATCGACATCAC+CGG | - | chr1.4:3133474-3133493 | None:intergenic | 35.0% | |
TTATCTGCATTGCCGTTATT+TGG | + | chr1.4:3134415-3134434 | MS.gene062755:CDS | 35.0% | |
TTCAAAGCTAGTCATGTCTT+TGG | + | chr1.4:3134927-3134946 | MS.gene062755:CDS | 35.0% | |
! | CAGAATTTTGGACTTTCAAG+GGG | + | chr1.4:3132578-3132597 | MS.gene062755:CDS | 35.0% |
! | CTCAGAATTTTGGACTTTCA+AGG | + | chr1.4:3132576-3132595 | MS.gene062755:CDS | 35.0% |
!! | ACTACTTTTGCTACATACCA+TGG | - | chr1.4:3134543-3134562 | None:intergenic | 35.0% |
!! | ATGACTAGCTTTGAATATGG+GGG | - | chr1.4:3134922-3134941 | None:intergenic | 35.0% |
!! | CAGACATTGTTGTTTATGTC+TGG | + | chr1.4:3133372-3133391 | MS.gene062755:CDS | 35.0% |
!! | CATGACTAGCTTTGAATATG+GGG | - | chr1.4:3134923-3134942 | None:intergenic | 35.0% |
!! | GACATGACTAGCTTTGAATA+TGG | - | chr1.4:3134925-3134944 | None:intergenic | 35.0% |
!! | TGTGTTTTATTCGGCATTGT+CGG | + | chr1.4:3136060-3136079 | MS.gene062755:CDS | 35.0% |
AACATGGAAAGGGTTATAGG+TGG | + | chr1.4:3135597-3135616 | MS.gene062755:intron | 40.0% | |
AACGCCATGAAGGATTTGAA+TGG | - | chr1.4:3132652-3132671 | None:intergenic | 40.0% | |
AACTTTCGCATCTGAGAATC+AGG | + | chr1.4:3133506-3133525 | MS.gene062755:CDS | 40.0% | |
AAGCAACCTTGTACCTCAAA+TGG | + | chr1.4:3133144-3133163 | MS.gene062755:CDS | 40.0% | |
AAGCTATCCTAGAGAGCTTA+TGG | - | chr1.4:3134691-3134710 | None:intergenic | 40.0% | |
AATAAAACCCAGGTTGTGCA+TGG | - | chr1.4:3135706-3135725 | None:intergenic | 40.0% | |
AATTGAGATCCCGAGAAACA+AGG | - | chr1.4:3136249-3136268 | None:intergenic | 40.0% | |
ACCACAGGTACAATGACAAT+GGG | - | chr1.4:3134055-3134074 | None:intergenic | 40.0% | |
ACGTGTGGTTTATGCTTGTT+TGG | + | chr1.4:3133699-3133718 | MS.gene062755:intron | 40.0% | |
ACTATTATTGCCACAGTTGG+TGG | - | chr1.4:3136587-3136606 | None:intergenic | 40.0% | |
AGCAACCTTGTACCTCAAAT+GGG | + | chr1.4:3133145-3133164 | MS.gene062755:CDS | 40.0% | |
AGGCTCATCATATACTTGAG+AGG | + | chr1.4:3134382-3134401 | MS.gene062755:CDS | 40.0% | |
AGTAGGAGTGAACATGGAAA+GGG | + | chr1.4:3135587-3135606 | MS.gene062755:intron | 40.0% | |
AGTATTGTATGCACCAGCAA+CGG | - | chr1.4:3134460-3134479 | None:intergenic | 40.0% | |
AGTGAAAATGTCGGTCTACT+CGG | + | chr1.4:3135817-3135836 | MS.gene062755:intron | 40.0% | |
ATGGAAATAGCAGTGGAGTA+TGG | - | chr1.4:3135687-3135706 | None:intergenic | 40.0% | |
ATGTTCCATACCCATTTCAG+TGG | + | chr1.4:3134892-3134911 | MS.gene062755:CDS | 40.0% | |
CAATGGGATAACTAGACACT+AGG | - | chr1.4:3135644-3135663 | None:intergenic | 40.0% | |
CCAACTATTATTGCCACAGT+TGG | - | chr1.4:3136590-3136609 | None:intergenic | 40.0% | |
CCAACTGTGGCAATAATAGT+TGG | + | chr1.4:3136587-3136606 | MS.gene062755:CDS | 40.0% | |
CCTTGGATATAGTAGGACAT+GGG | + | chr1.4:3133868-3133887 | MS.gene062755:CDS | 40.0% | |
CGTATTTCCATAAGCTCTCT+AGG | + | chr1.4:3134681-3134700 | MS.gene062755:intron | 40.0% | |
CTAGTGTCTAGTTATCCCAT+TGG | + | chr1.4:3135642-3135661 | MS.gene062755:intron | 40.0% | |
CTTGGATATAGTAGGACATG+GGG | + | chr1.4:3133869-3133888 | MS.gene062755:CDS | 40.0% | |
GAGAGGAATTGATGCGAAAA+AGG | - | chr1.4:3136019-3136038 | None:intergenic | 40.0% | |
GATTCTCAGATGCGAAAGTT+TGG | - | chr1.4:3133506-3133525 | None:intergenic | 40.0% | |
GCATCCATTCAAATCCTTCA+TGG | + | chr1.4:3132645-3132664 | MS.gene062755:CDS | 40.0% | |
GTCGCACAAATACTTACCAT+TGG | - | chr1.4:3134115-3134134 | None:intergenic | 40.0% | |
GTGAACATGGAAAGGGTTAT+AGG | + | chr1.4:3135594-3135613 | MS.gene062755:intron | 40.0% | |
GTTCCTTTCCAGAAAAGGAA+GGG | + | chr1.4:3136674-3136693 | MS.gene062755:CDS | 40.0% | |
GTTGTGTTACAATCAGCAGA+AGG | - | chr1.4:3134255-3134274 | None:intergenic | 40.0% | |
TACCACAGGTACAATGACAA+TGG | - | chr1.4:3134056-3134075 | None:intergenic | 40.0% | |
TACTGACATAAGCACTTGTG+TGG | + | chr1.4:3134603-3134622 | MS.gene062755:intron | 40.0% | |
TATGACACTTGCACTTGTAG+AGG | + | chr1.4:3133783-3133802 | MS.gene062755:intron | 40.0% | |
TATGATGAGCCTTAGCATGA+AGG | - | chr1.4:3134374-3134393 | None:intergenic | 40.0% | |
TCAACACATTGCTTCAGACT+TGG | + | chr1.4:3133397-3133416 | MS.gene062755:CDS | 40.0% | |
TCCTTGGATATAGTAGGACA+TGG | + | chr1.4:3133867-3133886 | MS.gene062755:CDS | 40.0% | |
TGGGTATGGAACATAAATCC+TGG | - | chr1.4:3134886-3134905 | None:intergenic | 40.0% | |
TGTTCCATACCCATTTCAGT+GGG | + | chr1.4:3134893-3134912 | MS.gene062755:CDS | 40.0% | |
! | ACATTGCTTCAGACTTGGTT+TGG | + | chr1.4:3133402-3133421 | MS.gene062755:CDS | 40.0% |
! | GAAAGTCCAAAATTCTGAGG+TGG | - | chr1.4:3132575-3132594 | None:intergenic | 40.0% |
! | TAACATCTCCCTTCCTTTTC+TGG | - | chr1.4:3136685-3136704 | None:intergenic | 40.0% |
! | TCTGCTGATTGTAACACAAC+AGG | + | chr1.4:3134255-3134274 | MS.gene062755:CDS | 40.0% |
! | TTCGGCTTAACCTTGTTTCT+CGG | + | chr1.4:3136236-3136255 | MS.gene062755:CDS | 40.0% |
! | TTTGAAGCACCTTCATGCTA+AGG | + | chr1.4:3134362-3134381 | MS.gene062755:CDS | 40.0% |
! | TTTTATTCGGCATTGTCGGT+AGG | + | chr1.4:3136064-3136083 | MS.gene062755:intron | 40.0% |
!! | AGTCATGTCTTTGGGATGAT+GGG | + | chr1.4:3134936-3134955 | MS.gene062755:CDS | 40.0% |
!! | AGTTAGAACCAATGGTGGAT+GGG | + | chr1.4:3136313-3136332 | MS.gene062755:CDS | 40.0% |
!! | AGTTGGTGGAGATGAGAATA+TGG | - | chr1.4:3136573-3136592 | None:intergenic | 40.0% |
!! | ATGCTGATTGAAGGCATTTG+TGG | + | chr1.4:3135485-3135504 | MS.gene062755:CDS | 40.0% |
!! | TAGTCATGTCTTTGGGATGA+TGG | + | chr1.4:3134935-3134954 | MS.gene062755:CDS | 40.0% |
!! | TTCAGACTTGGTTTGGTTCA+AGG | + | chr1.4:3133409-3133428 | MS.gene062755:CDS | 40.0% |
!!! | GCTAGTTTTTGGTAATGGCA+GGG | + | chr1.4:3133282-3133301 | MS.gene062755:intron | 40.0% |
!!! | TGCACAACCTGGGTTTTATT+TGG | + | chr1.4:3135706-3135725 | MS.gene062755:intron | 40.0% |
!!! | TGCTAGTTTTTGGTAATGGC+AGG | + | chr1.4:3133281-3133300 | MS.gene062755:intron | 40.0% |
AAACAAACAGCTGTGGACAG+AGG | + | chr1.4:3136638-3136657 | MS.gene062755:CDS | 45.0% | |
AACCTTGTACCTCAAATGGG+TGG | + | chr1.4:3133148-3133167 | MS.gene062755:CDS | 45.0% | |
ACCTTGTACCTCAAATGGGT+GGG | + | chr1.4:3133149-3133168 | MS.gene062755:CDS | 45.0% | |
AGAGTGGTGCAAATGTCATG+TGG | + | chr1.4:3135862-3135881 | MS.gene062755:CDS | 45.0% | |
AGTGATCCACCCATAATCAC+CGG | - | chr1.4:3133438-3133457 | None:intergenic | 45.0% | |
ATAGCAGCGAATATTGGGAG+AGG | - | chr1.4:3136036-3136055 | None:intergenic | 45.0% | |
ATTCTCATCTCCACCAACTG+TGG | + | chr1.4:3136574-3136593 | MS.gene062755:CDS | 45.0% | |
CAGCACTACATTGTGATGCT+TGG | + | chr1.4:3133103-3133122 | MS.gene062755:CDS | 45.0% | |
CATGGTCCAGTTAGAACCAA+TGG | + | chr1.4:3136305-3136324 | MS.gene062755:CDS | 45.0% | |
CATTGTACCTGTGGTATGTG+TGG | + | chr1.4:3134060-3134079 | MS.gene062755:CDS | 45.0% | |
CCCATGTCCTACTATATCCA+AGG | - | chr1.4:3133871-3133890 | None:intergenic | 45.0% | |
CTTGCAGATTGTGTGCAGAT+CGG | + | chr1.4:3134217-3134236 | MS.gene062755:CDS | 45.0% | |
GACAATGGGACTAAACAACC+TGG | - | chr1.4:3134041-3134060 | None:intergenic | 45.0% | |
GAGTAGGAGTGAACATGGAA+AGG | + | chr1.4:3135586-3135605 | MS.gene062755:intron | 45.0% | |
GGACTTGTAAAAAGGGACTG+AGG | - | chr1.4:3136390-3136409 | None:intergenic | 45.0% | |
GGTTCCTTTCCAGAAAAGGA+AGG | + | chr1.4:3136673-3136692 | MS.gene062755:CDS | 45.0% | |
GTACCTTGTCTTGTCTTGTG+TGG | + | chr1.4:3136522-3136541 | MS.gene062755:intron | 45.0% | |
GTCAACTGAATTGCTACGTG+TGG | + | chr1.4:3133684-3133703 | MS.gene062755:intron | 45.0% | |
GTTCCATACCCATTTCAGTG+GGG | + | chr1.4:3134894-3134913 | MS.gene062755:CDS | 45.0% | |
GTTGTGCATGGAAATAGCAG+TGG | - | chr1.4:3135694-3135713 | None:intergenic | 45.0% | |
TACTCGGTCTCACACACATT+GGG | + | chr1.4:3135833-3135852 | MS.gene062755:CDS | 45.0% | |
TCAAGGCTTCCGGTGATTAT+GGG | + | chr1.4:3133426-3133445 | MS.gene062755:CDS | 45.0% | |
TCCCATTGTCATTGTACCTG+TGG | + | chr1.4:3134051-3134070 | MS.gene062755:CDS | 45.0% | |
TCTGTCCACAGCTGTTTGTT+TGG | - | chr1.4:3136639-3136658 | None:intergenic | 45.0% | |
TGAAGCCAAACAAACAGCTG+TGG | + | chr1.4:3136631-3136650 | MS.gene062755:CDS | 45.0% | |
TGCAGGACCGGAAATGTAAA+AGG | - | chr1.4:3134339-3134358 | None:intergenic | 45.0% | |
TGCTTCAAATACTGCAGGAC+CGG | - | chr1.4:3134351-3134370 | None:intergenic | 45.0% | |
TGGAAAGGGTTATAGGTGGA+AGG | + | chr1.4:3135601-3135620 | MS.gene062755:intron | 45.0% | |
TGTCGGACACTAAGACATGT+TGG | + | chr1.4:3135137-3135156 | MS.gene062755:intron | 45.0% | |
TTCAAGGCTTCCGGTGATTA+TGG | + | chr1.4:3133425-3133444 | MS.gene062755:CDS | 45.0% | |
TTGCCACACAAGACAAGACA+AGG | - | chr1.4:3136528-3136547 | None:intergenic | 45.0% | |
TTGCTACATACCATGGTGCA+CGG | - | chr1.4:3134536-3134555 | None:intergenic | 45.0% | |
! | ACAATCAGCAGAAGGAGCAT+AGG | - | chr1.4:3134247-3134266 | None:intergenic | 45.0% |
! | AGCACTTGTCACTTCTTTCG+AGG | + | chr1.4:3134962-3134981 | MS.gene062755:CDS | 45.0% |
! | CAGTTAGAACCAATGGTGGA+TGG | + | chr1.4:3136312-3136331 | MS.gene062755:CDS | 45.0% |
! | GCTATTTCCATGCACAACCT+GGG | + | chr1.4:3135696-3135715 | MS.gene062755:intron | 45.0% |
! | GGCATTAGCATGCTGATTGA+AGG | + | chr1.4:3135476-3135495 | MS.gene062755:CDS | 45.0% |
! | GGCATTTGTGGCTCTATTGT+TGG | + | chr1.4:3135497-3135516 | MS.gene062755:CDS | 45.0% |
! | GTTCTGAGTAGGAGTGAACA+TGG | + | chr1.4:3135581-3135600 | MS.gene062755:intron | 45.0% |
! | TCGGCTTAACCTTGTTTCTC+GGG | + | chr1.4:3136237-3136256 | MS.gene062755:CDS | 45.0% |
!! | AGTCCAAAATTCTGAGGTGG+TGG | - | chr1.4:3132572-3132591 | None:intergenic | 45.0% |
!! | CATCCACCATTGGTTCTAAC+TGG | - | chr1.4:3136314-3136333 | None:intergenic | 45.0% |
!! | GAAGGTGCTTCAAATACTGC+AGG | - | chr1.4:3134356-3134375 | None:intergenic | 45.0% |
!! | TCTCCCTTCCTTTTCTGGAA+AGG | - | chr1.4:3136680-3136699 | None:intergenic | 45.0% |
!! | TGCTATTTCCATGCACAACC+TGG | + | chr1.4:3135695-3135714 | MS.gene062755:intron | 45.0% |
!! | TTGGTTTGGTTCAAGGCTTC+CGG | + | chr1.4:3133416-3133435 | MS.gene062755:CDS | 45.0% |
!!! | TGCAGCTGAAGCATTGCTTT+TGG | + | chr1.4:3133075-3133094 | MS.gene062755:intron | 45.0% |
AACACTGCACCTGATGGTCA+TGG | + | chr1.4:3136287-3136306 | MS.gene062755:CDS | 50.0% | |
ACACATTGGGAGCAGAAGAG+TGG | + | chr1.4:3135846-3135865 | MS.gene062755:CDS | 50.0% | |
ACATGACTCCCACCCATTTG+AGG | - | chr1.4:3133160-3133179 | None:intergenic | 50.0% | |
ACCAGCAACGGTAAGGATAG+CGG | - | chr1.4:3134448-3134467 | None:intergenic | 50.0% | |
AGCGGCGAAAGCCCAAATAA+CGG | - | chr1.4:3134430-3134449 | None:intergenic | 50.0% | |
AGCTGAAGAAGCTGTTCAGC+TGG | - | chr1.4:3132617-3132636 | None:intergenic | 50.0% | |
AGTCCAACCACACATACCAC+AGG | - | chr1.4:3134070-3134089 | None:intergenic | 50.0% | |
CACACAATCTGCAAGCTGCA+TGG | - | chr1.4:3134212-3134231 | None:intergenic | 50.0% | |
CTAACTGGACCATGACCATC+AGG | - | chr1.4:3136299-3136318 | None:intergenic | 50.0% | |
CTACTCGGTCTCACACACAT+TGG | + | chr1.4:3135832-3135851 | MS.gene062755:CDS | 50.0% | |
GGTCCAGTTAGAACCAATGG+TGG | + | chr1.4:3136308-3136327 | MS.gene062755:CDS | 50.0% | |
GTACCCCACTGAAATGGGTA+TGG | - | chr1.4:3134900-3134919 | None:intergenic | 50.0% | |
GTACCTGTGGTATGTGTGGT+TGG | + | chr1.4:3134064-3134083 | MS.gene062755:CDS | 50.0% | |
GTCATGAACACTGCACCTGA+TGG | + | chr1.4:3136281-3136300 | MS.gene062755:CDS | 50.0% | |
GTGACTTACCCATCCACCAT+TGG | - | chr1.4:3136324-3136343 | None:intergenic | 50.0% | |
GTGGCTGTTTGAGAGAGCTT+AGG | + | chr1.4:3134622-3134641 | MS.gene062755:intron | 50.0% | |
GTGGTATGTGTGGTTGGACT+CGG | + | chr1.4:3134070-3134089 | MS.gene062755:CDS | 50.0% | |
TATCTCCTGCAGCTGCTACT+GGG | + | chr1.4:3136162-3136181 | MS.gene062755:intron | 50.0% | |
TGCTACATACCATGGTGCAC+GGG | - | chr1.4:3134535-3134554 | None:intergenic | 50.0% | |
TGTATGCACCAGCAACGGTA+AGG | - | chr1.4:3134455-3134474 | None:intergenic | 50.0% | |
TGTTCAGCTGGAGTCCAAGT+GGG | - | chr1.4:3132605-3132624 | None:intergenic | 50.0% | |
! | GGACCACCACCTCAGAATTT+TGG | + | chr1.4:3132566-3132585 | MS.gene062755:CDS | 50.0% |
! | GGTGGGTTCCTTTCCAGAAA+AGG | + | chr1.4:3136669-3136688 | MS.gene062755:CDS | 50.0% |
! | GTAGCTACATGTGTCGGTGT+CGG | + | chr1.4:3135120-3135139 | MS.gene062755:intron | 50.0% |
! | TCCCACCCATTTGAGGTACA+AGG | - | chr1.4:3133153-3133172 | None:intergenic | 50.0% |
! | TTCTGGAAAGGAACCCACCA+TGG | - | chr1.4:3136668-3136687 | None:intergenic | 50.0% |
!! | AAATTCTGAGGTGGTGGTCC+CGG | - | chr1.4:3132566-3132585 | None:intergenic | 50.0% |
AGGCTTCCGGTGATTATGGG+TGG | + | chr1.4:3133429-3133448 | MS.gene062755:CDS | 55.0% | |
CATGTGCTCAGCCGAAGCAT+CGG | + | chr1.4:3135354-3135373 | MS.gene062755:CDS | 55.0% | |
CTATCTCCTGCAGCTGCTAC+TGG | + | chr1.4:3136161-3136180 | MS.gene062755:intron | 55.0% | |
CTGTGGACAGAGGACTTCCA+TGG | + | chr1.4:3136648-3136667 | MS.gene062755:CDS | 55.0% | |
CTGTTCAGCTGGAGTCCAAG+TGG | - | chr1.4:3132606-3132625 | None:intergenic | 55.0% | |
GACTTTCAAGGGGTCCCACT+TGG | + | chr1.4:3132588-3132607 | MS.gene062755:CDS | 55.0% | |
GGACAGAGGACTTCCATGGT+GGG | + | chr1.4:3136652-3136671 | MS.gene062755:CDS | 55.0% | |
TCACCTGAAGCCCGATGCTT+CGG | - | chr1.4:3135368-3135387 | None:intergenic | 55.0% | |
TGGACAGAGGACTTCCATGG+TGG | + | chr1.4:3136651-3136670 | MS.gene062755:CDS | 55.0% | |
! | ATGTGCTCAGCCGAAGCATC+GGG | + | chr1.4:3135355-3135374 | MS.gene062755:CDS | 55.0% |
!! | ATGGGGGTACCCCACTGAAA+TGG | - | chr1.4:3134906-3134925 | None:intergenic | 55.0% |
!! | TGGGGGTACCCCACTGAAAT+GGG | - | chr1.4:3134905-3134924 | None:intergenic | 55.0% |
ACCATGGTGCACGGGTCAGA+AGG | - | chr1.4:3134527-3134546 | None:intergenic | 60.0% | |
ACCTTCTGACCCGTGCACCA+TGG | + | chr1.4:3134523-3134542 | MS.gene062755:CDS | 60.0% | |
CCAAGCACCACCGTCAGTTC+AGG | + | chr1.4:3132532-3132551 | MS.gene062755:CDS | 60.0% | |
CCTGAACTGACGGTGGTGCT+TGG | - | chr1.4:3132535-3132554 | None:intergenic | 60.0% | |
CTTCGGCTGAGCACATGTGC+CGG | - | chr1.4:3135351-3135370 | None:intergenic | 60.0% | |
GAACTGACGGTGGTGCTTGG+TGG | - | chr1.4:3132532-3132551 | None:intergenic | 60.0% | |
GAGATCCCAGTAGCAGCTGC+AGG | - | chr1.4:3136170-3136189 | None:intergenic | 60.0% | |
GCCGCTATCCTTACCGTTGC+TGG | + | chr1.4:3134444-3134463 | MS.gene062755:CDS | 60.0% | |
GTACTTTCTTCGCCGCAGCC+AGG | + | chr1.4:3135304-3135323 | MS.gene062755:CDS | 60.0% | |
GTTCGCGAGGGGCTTTCCAA+TGG | + | chr1.4:3134096-3134115 | MS.gene062755:CDS | 60.0% | |
TGCACCAGAAAGCCTGGCTG+CGG | - | chr1.4:3135319-3135338 | None:intergenic | 60.0% | |
TTCTGGTGCAACACCCCCTC+CGG | + | chr1.4:3135329-3135348 | MS.gene062755:CDS | 60.0% | |
! | GGCTGCGGCGAAGAAAGTAC+CGG | - | chr1.4:3135304-3135323 | None:intergenic | 60.0% |
! | GGGTGTTGCACCAGAAAGCC+TGG | - | chr1.4:3135325-3135344 | None:intergenic | 60.0% |
! | TGGACTCGGTCTGTTCGCGA+GGG | + | chr1.4:3134084-3134103 | MS.gene062755:CDS | 60.0% |
! | TTGGACTCGGTCTGTTCGCG+AGG | + | chr1.4:3134083-3134102 | MS.gene062755:CDS | 60.0% |
CTGAGCACATGTGCCGGAGG+GGG | - | chr1.4:3135345-3135364 | None:intergenic | 65.0% | |
GCTGAGCACATGTGCCGGAG+GGG | - | chr1.4:3135346-3135365 | None:intergenic | 65.0% | |
GGCTGAGCACATGTGCCGGA+GGG | - | chr1.4:3135347-3135366 | None:intergenic | 65.0% | |
TTCGCCGCAGCCAGGCTTTC+TGG | + | chr1.4:3135312-3135331 | MS.gene062755:CDS | 65.0% | |
! | GGACTCGGTCTGTTCGCGAG+GGG | + | chr1.4:3134085-3134104 | MS.gene062755:CDS | 65.0% |
! | GGTGGCGGTGCCTGAACTGA+CGG | - | chr1.4:3132545-3132564 | None:intergenic | 65.0% |
! | GTCAGTTCAGGCACCGCCAC+CGG | + | chr1.4:3132544-3132563 | MS.gene062755:CDS | 65.0% |
! | TCAGTTCAGGCACCGCCACC+GGG | + | chr1.4:3132545-3132564 | MS.gene062755:CDS | 65.0% |
!! | CAGCCGAAGCATCGGGCTTC+AGG | + | chr1.4:3135362-3135381 | MS.gene062755:CDS | 65.0% |
!! | TTCTGAGGTGGTGGTCCCGG+TGG | - | chr1.4:3132563-3132582 | None:intergenic | 65.0% |
CGGCTGAGCACATGTGCCGG+AGG | - | chr1.4:3135348-3135367 | None:intergenic | 70.0% | |
GGCGGTGCCTGAACTGACGG+TGG | - | chr1.4:3132542-3132561 | None:intergenic | 70.0% | |
! | TGAGGTGGTGGTCCCGGTGG+CGG | - | chr1.4:3132560-3132579 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 3132509 | 3136769 | 3132509 | ID=MS.gene062755 |
chr1.4 | mRNA | 3132509 | 3136769 | 3132509 | ID=MS.gene062755.t1;Parent=MS.gene062755 |
chr1.4 | exon | 3132509 | 3132668 | 3132509 | ID=MS.gene062755.t1.exon1;Parent=MS.gene062755.t1 |
chr1.4 | CDS | 3132509 | 3132668 | 3132509 | ID=cds.MS.gene062755.t1;Parent=MS.gene062755.t1 |
chr1.4 | exon | 3133080 | 3133177 | 3133080 | ID=MS.gene062755.t1.exon2;Parent=MS.gene062755.t1 |
chr1.4 | CDS | 3133080 | 3133177 | 3133080 | ID=cds.MS.gene062755.t1;Parent=MS.gene062755.t1 |
chr1.4 | exon | 3133351 | 3133527 | 3133351 | ID=MS.gene062755.t1.exon3;Parent=MS.gene062755.t1 |
chr1.4 | CDS | 3133351 | 3133527 | 3133351 | ID=cds.MS.gene062755.t1;Parent=MS.gene062755.t1 |
chr1.4 | exon | 3133803 | 3133903 | 3133803 | ID=MS.gene062755.t1.exon4;Parent=MS.gene062755.t1 |
chr1.4 | CDS | 3133803 | 3133903 | 3133803 | ID=cds.MS.gene062755.t1;Parent=MS.gene062755.t1 |
chr1.4 | exon | 3134042 | 3134117 | 3134042 | ID=MS.gene062755.t1.exon5;Parent=MS.gene062755.t1 |
chr1.4 | CDS | 3134042 | 3134117 | 3134042 | ID=cds.MS.gene062755.t1;Parent=MS.gene062755.t1 |
chr1.4 | exon | 3134217 | 3134276 | 3134217 | ID=MS.gene062755.t1.exon6;Parent=MS.gene062755.t1 |
chr1.4 | CDS | 3134217 | 3134276 | 3134217 | ID=cds.MS.gene062755.t1;Parent=MS.gene062755.t1 |
chr1.4 | exon | 3134360 | 3134544 | 3134360 | ID=MS.gene062755.t1.exon7;Parent=MS.gene062755.t1 |
chr1.4 | CDS | 3134360 | 3134544 | 3134360 | ID=cds.MS.gene062755.t1;Parent=MS.gene062755.t1 |
chr1.4 | exon | 3134887 | 3134983 | 3134887 | ID=MS.gene062755.t1.exon8;Parent=MS.gene062755.t1 |
chr1.4 | CDS | 3134887 | 3134983 | 3134887 | ID=cds.MS.gene062755.t1;Parent=MS.gene062755.t1 |
chr1.4 | exon | 3135297 | 3135383 | 3135297 | ID=MS.gene062755.t1.exon9;Parent=MS.gene062755.t1 |
chr1.4 | CDS | 3135297 | 3135383 | 3135297 | ID=cds.MS.gene062755.t1;Parent=MS.gene062755.t1 |
chr1.4 | exon | 3135476 | 3135534 | 3135476 | ID=MS.gene062755.t1.exon10;Parent=MS.gene062755.t1 |
chr1.4 | CDS | 3135476 | 3135534 | 3135476 | ID=cds.MS.gene062755.t1;Parent=MS.gene062755.t1 |
chr1.4 | exon | 3135819 | 3135910 | 3135819 | ID=MS.gene062755.t1.exon11;Parent=MS.gene062755.t1 |
chr1.4 | CDS | 3135819 | 3135910 | 3135819 | ID=cds.MS.gene062755.t1;Parent=MS.gene062755.t1 |
chr1.4 | exon | 3136004 | 3136081 | 3136004 | ID=MS.gene062755.t1.exon12;Parent=MS.gene062755.t1 |
chr1.4 | CDS | 3136004 | 3136081 | 3136004 | ID=cds.MS.gene062755.t1;Parent=MS.gene062755.t1 |
chr1.4 | exon | 3136174 | 3136334 | 3136174 | ID=MS.gene062755.t1.exon13;Parent=MS.gene062755.t1 |
chr1.4 | CDS | 3136174 | 3136334 | 3136174 | ID=cds.MS.gene062755.t1;Parent=MS.gene062755.t1 |
chr1.4 | exon | 3136551 | 3136769 | 3136551 | ID=MS.gene062755.t1.exon14;Parent=MS.gene062755.t1 |
chr1.4 | CDS | 3136551 | 3136769 | 3136551 | ID=cds.MS.gene062755.t1;Parent=MS.gene062755.t1 |
Gene Sequence |
Protein sequence |