Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044204.t1 | XP_003601408.2 | 99.8 | 520 | 1 | 0 | 1 | 520 | 1 | 520 | 4.00E-299 | 1036.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044204.t1 | Q9SHZ3 | 86.7 | 520 | 69 | 0 | 1 | 520 | 1 | 520 | 5.7e-270 | 931.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044204.t1 | G7J799 | 99.8 | 520 | 1 | 0 | 1 | 520 | 1 | 520 | 2.9e-299 | 1036.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene70604 | MS.gene044204 | PPI |
| MS.gene022275 | MS.gene044204 | PPI |
| MS.gene044204 | MS.gene53408 | PPI |
| MS.gene044204 | MS.gene43290 | PPI |
| MS.gene67081 | MS.gene044204 | PPI |
| MS.gene25932 | MS.gene044204 | PPI |
| MS.gene86930 | MS.gene044204 | PPI |
| MS.gene044204 | MS.gene27811 | PPI |
| MS.gene044204 | MS.gene023585 | PPI |
| MS.gene043994 | MS.gene044204 | PPI |
| MS.gene033221 | MS.gene044204 | PPI |
| MS.gene074377 | MS.gene044204 | PPI |
| MS.gene044204 | MS.gene24355 | PPI |
| MS.gene71606 | MS.gene044204 | PPI |
| MS.gene044204 | MS.gene27812 | PPI |
| MS.gene044204 | MS.gene91317 | PPI |
| MS.gene60344 | MS.gene044204 | PPI |
| MS.gene044204 | MS.gene058853 | PPI |
| MS.gene56947 | MS.gene044204 | PPI |
| MS.gene062755 | MS.gene044204 | PPI |
| MS.gene044204 | MS.gene96701 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044204.t1 | MTR_3g080390 | 99.808 | 520 | 1 | 0 | 1 | 520 | 1 | 520 | 0.0 | 1051 |
| MS.gene044204.t1 | MTR_8g086520 | 72.780 | 518 | 140 | 1 | 3 | 520 | 8 | 524 | 0.0 | 794 |
| MS.gene044204.t1 | MTR_2g016460 | 69.305 | 518 | 158 | 1 | 3 | 520 | 8 | 524 | 0.0 | 761 |
| MS.gene044204.t1 | MTR_8g086520 | 72.545 | 448 | 122 | 1 | 3 | 450 | 8 | 454 | 0.0 | 678 |
| MS.gene044204.t1 | MTR_8g086520 | 73.267 | 404 | 107 | 1 | 117 | 520 | 6 | 408 | 0.0 | 623 |
| MS.gene044204.t1 | MTR_3g078270 | 59.223 | 515 | 207 | 2 | 6 | 518 | 17 | 530 | 0.0 | 611 |
| MS.gene044204.t1 | MTR_8g063220 | 58.058 | 515 | 213 | 2 | 6 | 518 | 18 | 531 | 0.0 | 610 |
| MS.gene044204.t1 | MTR_8g086520 | 73.418 | 395 | 104 | 1 | 3 | 397 | 8 | 401 | 0.0 | 601 |
| MS.gene044204.t1 | MTR_4g106750 | 57.864 | 515 | 214 | 2 | 6 | 518 | 17 | 530 | 0.0 | 598 |
| MS.gene044204.t1 | MTR_1g021120 | 58.366 | 514 | 213 | 1 | 5 | 518 | 33 | 545 | 0.0 | 593 |
| MS.gene044204.t1 | MTR_5g035180 | 56.008 | 516 | 223 | 3 | 6 | 518 | 22 | 536 | 0.0 | 582 |
| MS.gene044204.t1 | MTR_4g106750 | 57.884 | 482 | 200 | 2 | 39 | 518 | 1 | 481 | 0.0 | 553 |
| MS.gene044204.t1 | MTR_3g103230 | 50.870 | 517 | 248 | 3 | 4 | 518 | 40 | 552 | 0.0 | 547 |
| MS.gene044204.t1 | MTR_1g106085 | 54.951 | 515 | 226 | 3 | 6 | 518 | 15 | 525 | 0.0 | 545 |
| MS.gene044204.t1 | MTR_5g022110 | 51.550 | 516 | 242 | 4 | 6 | 518 | 35 | 545 | 0.0 | 531 |
| MS.gene044204.t1 | MTR_4g106750 | 57.453 | 369 | 154 | 2 | 152 | 518 | 11 | 378 | 6.25e-148 | 429 |
| MS.gene044204.t1 | MTR_8g068550 | 37.873 | 536 | 296 | 6 | 14 | 517 | 225 | 755 | 1.82e-116 | 361 |
| MS.gene044204.t1 | MTR_2g084895 | 38.361 | 537 | 292 | 6 | 15 | 517 | 147 | 678 | 8.77e-109 | 339 |
| MS.gene044204.t1 | MTR_5g032020 | 37.406 | 532 | 296 | 5 | 14 | 513 | 167 | 693 | 1.57e-106 | 333 |
| MS.gene044204.t1 | MTR_4g055290 | 36.872 | 537 | 295 | 7 | 15 | 517 | 154 | 680 | 7.21e-102 | 321 |
| MS.gene044204.t1 | MTR_2g103510 | 36.224 | 519 | 294 | 7 | 15 | 517 | 94 | 591 | 4.21e-101 | 317 |
| MS.gene044204.t1 | MTR_8g086535 | 81.000 | 100 | 19 | 0 | 298 | 397 | 18 | 117 | 4.28e-46 | 157 |
| MS.gene044204.t1 | MTR_5g042660 | 80.357 | 56 | 11 | 0 | 451 | 506 | 39 | 94 | 1.19e-25 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene044204.t1 | AT2G05760 | 86.731 | 520 | 69 | 0 | 1 | 520 | 1 | 520 | 0.0 | 946 |
| MS.gene044204.t1 | AT2G34190 | 69.498 | 518 | 157 | 1 | 3 | 520 | 8 | 524 | 0.0 | 775 |
| MS.gene044204.t1 | AT5G62890 | 58.140 | 516 | 211 | 3 | 6 | 518 | 17 | 530 | 0.0 | 600 |
| MS.gene044204.t1 | AT5G62890 | 58.140 | 516 | 211 | 3 | 6 | 518 | 17 | 530 | 0.0 | 600 |
| MS.gene044204.t1 | AT5G62890 | 58.140 | 516 | 211 | 3 | 6 | 518 | 17 | 530 | 0.0 | 600 |
| MS.gene044204.t1 | AT1G60030 | 56.395 | 516 | 220 | 3 | 6 | 518 | 23 | 536 | 0.0 | 597 |
| MS.gene044204.t1 | AT2G26510 | 57.087 | 515 | 219 | 2 | 5 | 518 | 34 | 547 | 0.0 | 588 |
| MS.gene044204.t1 | AT5G49990 | 57.864 | 515 | 214 | 2 | 6 | 518 | 13 | 526 | 0.0 | 582 |
| MS.gene044204.t1 | AT5G49990 | 57.864 | 515 | 214 | 2 | 6 | 518 | 13 | 526 | 0.0 | 582 |
| MS.gene044204.t1 | AT5G49990 | 57.864 | 515 | 214 | 2 | 6 | 518 | 13 | 526 | 0.0 | 582 |
| MS.gene044204.t1 | AT5G49990 | 57.864 | 515 | 214 | 2 | 6 | 518 | 13 | 526 | 0.0 | 582 |
| MS.gene044204.t1 | AT1G10540 | 53.578 | 517 | 236 | 3 | 6 | 518 | 21 | 537 | 0.0 | 563 |
| MS.gene044204.t1 | AT1G49960 | 56.420 | 514 | 221 | 2 | 7 | 518 | 12 | 524 | 0.0 | 556 |
| MS.gene044204.t1 | AT1G65550 | 48.762 | 525 | 251 | 5 | 6 | 518 | 21 | 539 | 0.0 | 527 |
| MS.gene044204.t1 | AT5G62890 | 58.296 | 446 | 183 | 2 | 6 | 450 | 17 | 460 | 0.0 | 519 |
| MS.gene044204.t1 | AT2G26510 | 58.583 | 367 | 151 | 1 | 5 | 371 | 34 | 399 | 1.34e-144 | 422 |
| MS.gene044204.t1 | AT2G26510 | 58.873 | 355 | 143 | 2 | 5 | 358 | 34 | 386 | 2.81e-139 | 409 |
| MS.gene044204.t1 | AT1G10540 | 53.533 | 368 | 169 | 2 | 6 | 371 | 21 | 388 | 9.59e-134 | 394 |
| MS.gene044204.t1 | AT5G25420 | 43.155 | 431 | 176 | 6 | 6 | 436 | 33 | 394 | 2.67e-118 | 355 |
| MS.gene044204.t1 | AT2G27810 | 38.547 | 537 | 292 | 6 | 15 | 517 | 169 | 701 | 1.65e-102 | 323 |
| MS.gene044204.t1 | AT4G38050 | 37.009 | 535 | 300 | 6 | 15 | 517 | 175 | 704 | 3.44e-99 | 315 |
| MS.gene044204.t1 | AT2G27810 | 36.898 | 561 | 292 | 7 | 15 | 517 | 169 | 725 | 2.60e-97 | 310 |
| MS.gene044204.t1 | AT2G27810 | 39.953 | 423 | 234 | 4 | 15 | 419 | 169 | 589 | 6.36e-82 | 266 |
| MS.gene044204.t1 | AT2G27810 | 39.894 | 376 | 206 | 4 | 15 | 372 | 169 | 542 | 2.32e-69 | 232 |
Find 132 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTGCTTGATGGTCTTTA+TGG | 0.167803 | 3.4:+76766222 | MS.gene044204:CDS |
| TGATTTGTGTTACAATTATT+TGG | 0.170525 | 3.4:+76765485 | MS.gene044204:CDS |
| GCTTTGTATTGTGTTCTATT+TGG | 0.230280 | 3.4:+76766659 | MS.gene044204:CDS |
| CTGTTATCTGCAGGAAAGTT+TGG | 0.239227 | 3.4:+76766599 | MS.gene044204:intron |
| ATGATATTCTTTGCTACTTT+AGG | 0.245870 | 3.4:+76766446 | MS.gene044204:CDS |
| ACCTATCTTTGAACGTTTCC+CGG | 0.294152 | 3.4:+76765459 | MS.gene044204:CDS |
| CATCCGGCGTTGGTGTGAAC+AGG | 0.321205 | 3.4:-76767432 | None:intergenic |
| TTAGGGAACTGTGTAGAAAT+TGG | 0.337078 | 3.4:+76765274 | MS.gene044204:CDS |
| CTTGATGGTCTTTATGGAAC+GGG | 0.342480 | 3.4:+76766228 | MS.gene044204:CDS |
| TGTTGCTGGTGATGAGAATA+TGG | 0.345149 | 3.4:-76767609 | None:intergenic |
| TGTGTTCTATTTGGCCTTGT+TGG | 0.347283 | 3.4:+76766668 | MS.gene044204:CDS |
| GTAGTTGGATTGGTTGGATT+AGG | 0.352915 | 3.4:+76765124 | MS.gene044204:CDS |
| CTTGGCATGGCACCTGTAGT+TGG | 0.360665 | 3.4:+76765109 | MS.gene044204:CDS |
| TGCTCGGTTACAGCCAGGTC+TGG | 0.363006 | 3.4:+76764972 | MS.gene044204:CDS |
| CAATACAAAGCAGCAAATAT+CGG | 0.366880 | 3.4:-76766647 | None:intergenic |
| CTTTGCCATTCAATCTAAAC+AGG | 0.372791 | 3.4:+76767762 | MS.gene044204:CDS |
| TTCATTTCTCGTTCCAGCTA+TGG | 0.373673 | 3.4:+76764046 | MS.gene044204:CDS |
| GGTGTAAATTGCAGTATCTA+AGG | 0.385923 | 3.4:+76765413 | MS.gene044204:intron |
| ATTGTAACACAAATCAAAAC+CGG | 0.389430 | 3.4:-76765478 | None:intergenic |
| GCAGTCAACTGGTGCATATA+AGG | 0.392894 | 3.4:+76765869 | MS.gene044204:intron |
| AAGATAGGTATGTCTCTAAA+TGG | 0.403795 | 3.4:-76765445 | None:intergenic |
| CCGATGCTGTTGTTGGTCAT+TGG | 0.404111 | 3.4:+76765301 | MS.gene044204:CDS |
| GCTCGGTTACAGCCAGGTCT+GGG | 0.404310 | 3.4:+76764973 | MS.gene044204:CDS |
| GGGATTGGTATCTTGCTTGA+TGG | 0.404600 | 3.4:+76766213 | MS.gene044204:CDS |
| AGCAAAGAATATCATAAAAC+CGG | 0.417694 | 3.4:-76766438 | None:intergenic |
| ATGAGAAATCTTATCATCAC+TGG | 0.421345 | 3.4:+76767339 | MS.gene044204:CDS |
| AAGAACCTGTTTAGATTGAA+TGG | 0.421526 | 3.4:-76767767 | None:intergenic |
| GTCTGCAGTTCTTGTCTCAA+TGG | 0.428983 | 3.4:+76765765 | MS.gene044204:CDS |
| GGTCTTTATGGAACGGGGAC+GGG | 0.434224 | 3.4:+76766234 | MS.gene044204:CDS |
| ACTGGGCTCACACTGTTCCT+TGG | 0.436990 | 3.4:+76767357 | MS.gene044204:CDS |
| AGGGAAAATGTGGGACTCCT+TGG | 0.438130 | 3.4:+76766374 | MS.gene044204:intron |
| GTAAAGTTTAGAACATTTAG+AGG | 0.439217 | 3.4:+76767713 | MS.gene044204:CDS |
| ACCGGGAAACGTTCAAAGAT+AGG | 0.442921 | 3.4:-76765460 | None:intergenic |
| ACAGGATTTCCTCCCATAGC+TGG | 0.452387 | 3.4:-76764059 | None:intergenic |
| ACGATCAATCCTACTGTTGC+TGG | 0.453105 | 3.4:-76767623 | None:intergenic |
| TCATTTCTCGTTCCAGCTAT+GGG | 0.459805 | 3.4:+76764047 | MS.gene044204:CDS |
| CATGGCACCTGTAGTTGGAT+TGG | 0.460391 | 3.4:+76765114 | MS.gene044204:CDS |
| GGACCCCATTGTAGAGGGTA+TGG | 0.463266 | 3.4:-76765706 | None:intergenic |
| GTCTTGTTCCGAAAAGTGCT+TGG | 0.468302 | 3.4:-76764291 | None:intergenic |
| GCACCTGTAGTTGGATTGGT+TGG | 0.471696 | 3.4:+76765118 | MS.gene044204:CDS |
| TGGTCTTTATGGAACGGGGA+CGG | 0.471826 | 3.4:+76766233 | MS.gene044204:CDS |
| CTGTTCACACCAACGCCGGA+TGG | 0.473092 | 3.4:+76767433 | MS.gene044204:CDS |
| ACAAGACTGCCTGCAGTAGT+TGG | 0.478198 | 3.4:+76764307 | MS.gene044204:CDS |
| GAGTCGTGGCATTGGTTGGC+AGG | 0.487574 | 3.4:+76765938 | MS.gene044204:CDS |
| GTACCATGTTTGCAGTCAAC+TGG | 0.493026 | 3.4:+76765858 | MS.gene044204:intron |
| AGGTCTTGAAGTTGTTCCAT+AGG | 0.494492 | 3.4:-76761906 | None:intergenic |
| TCATTAATAATATAAGCAAC+TGG | 0.496140 | 3.4:-76764352 | None:intergenic |
| GTTCCCATACCCTCTACAAT+GGG | 0.497195 | 3.4:+76765702 | MS.gene044204:CDS |
| CCTTGTTTACCAGGTGCAGT+TGG | 0.497805 | 3.4:+76767282 | MS.gene044204:intron |
| TAGAGTCTATGCAGTATTCA+AGG | 0.497867 | 3.4:-76761926 | None:intergenic |
| GCTTGATGGTCTTTATGGAA+CGG | 0.500532 | 3.4:+76766227 | MS.gene044204:CDS |
| CTCCTTGGTCTGACTCGAGT+TGG | 0.501864 | 3.4:+76766389 | MS.gene044204:CDS |
| AATACAAAGCAGCAAATATC+GGG | 0.502068 | 3.4:-76766646 | None:intergenic |
| TCTGTCATCTTGACTGCTAG+TGG | 0.504194 | 3.4:+76765514 | MS.gene044204:CDS |
| CTTGTTCAATCAGGGTGACA+AGG | 0.514640 | 3.4:+76764219 | MS.gene044204:intron |
| AGAGTTGTTCAGATTTCTGC+CGG | 0.516195 | 3.4:+76766419 | MS.gene044204:CDS |
| CATAGACTCTAATCCTCCAT+GGG | 0.522575 | 3.4:+76761938 | MS.gene044204:CDS |
| CATACAATGCGAGCTATACA+AGG | 0.524147 | 3.4:+76764917 | MS.gene044204:CDS |
| CGGGGCAGTAGATATTAGAT+TGG | 0.526481 | 3.4:-76765590 | None:intergenic |
| TCAATCAGGGTGACAAGGCA+AGG | 0.526818 | 3.4:+76764224 | MS.gene044204:intron |
| GCATAGACTCTAATCCTCCA+TGG | 0.538336 | 3.4:+76761937 | MS.gene044204:CDS |
| TGTTCACACCAACGCCGGAT+GGG | 0.540061 | 3.4:+76767434 | MS.gene044204:CDS |
| CCACGACTCAACACATAAGC+AGG | 0.540372 | 3.4:-76765924 | None:intergenic |
| GATAGTGCTCGGTTACAGCC+AGG | 0.540674 | 3.4:+76764967 | MS.gene044204:CDS |
| TATGTGTTGAGTCGTGGCAT+TGG | 0.541938 | 3.4:+76765930 | MS.gene044204:CDS |
| AAGAGTGACTTACACAGAAA+CGG | 0.542109 | 3.4:-76766262 | None:intergenic |
| GACAAGAACTGCAGACATCA+TGG | 0.542492 | 3.4:-76765758 | None:intergenic |
| TTAATATTCCAGGGAAAATG+TGG | 0.543286 | 3.4:+76766364 | MS.gene044204:intron |
| TGGAATACCGATGCTGTTGT+TGG | 0.543522 | 3.4:+76765294 | MS.gene044204:CDS |
| TCTCTAGATCATCATGTAGG+TGG | 0.543748 | 3.4:-76767791 | None:intergenic |
| CTTTCTCTAGATCATCATGT+AGG | 0.546950 | 3.4:-76767794 | None:intergenic |
| TGCAGTTCTTGTCTCAATGG+TGG | 0.554394 | 3.4:+76765768 | MS.gene044204:CDS |
| CTCTAGATCATCATGTAGGT+GGG | 0.555606 | 3.4:-76767790 | None:intergenic |
| AGACTGCCTGCAGTAGTTGG+AGG | 0.556312 | 3.4:+76764310 | MS.gene044204:CDS |
| CAATTATGCTGCGTTTGAGA+AGG | 0.559208 | 3.4:-76765553 | None:intergenic |
| TGTTGAGTCGTGGCATTGGT+TGG | 0.565395 | 3.4:+76765934 | MS.gene044204:CDS |
| GTAGGGAAAACACACCCATC+CGG | 0.565609 | 3.4:-76767448 | None:intergenic |
| CAACCTCAAGAGTGTTGTCG+AGG | 0.568887 | 3.4:-76767655 | None:intergenic |
| AGTTCTTGTCTCAATGGTGG+AGG | 0.569072 | 3.4:+76765771 | MS.gene044204:CDS |
| AATCCAACCAATCCAACTAC+AGG | 0.569506 | 3.4:-76765121 | None:intergenic |
| TCTTGAAGTTGTTCCATAGG+TGG | 0.574335 | 3.4:-76761903 | None:intergenic |
| TGTTCCCATACCCTCTACAA+TGG | 0.575504 | 3.4:+76765701 | MS.gene044204:CDS |
| CTCAACACATAAGCAGGAGG+TGG | 0.578742 | 3.4:-76765918 | None:intergenic |
| ATAGCTGGAACGAGAAATGA+AGG | 0.579906 | 3.4:-76764044 | None:intergenic |
| CAAAGCAGCAAATATCGGGA+AGG | 0.582064 | 3.4:-76766642 | None:intergenic |
| CACATAAGCAGGAGGTGGAG+TGG | 0.582532 | 3.4:-76765913 | None:intergenic |
| AAAACACACCCATCCGGCGT+TGG | 0.582873 | 3.4:-76767442 | None:intergenic |
| CTACCGTGGGAAATCCTCGT+TGG | 0.583638 | 3.4:-76765153 | None:intergenic |
| ATCATTAATTCGTTGCAATG+AGG | 0.584512 | 3.4:-76764377 | None:intergenic |
| CTCGGTTACAGCCAGGTCTG+GGG | 0.585040 | 3.4:+76764974 | MS.gene044204:CDS |
| GACCCCATTGTAGAGGGTAT+GGG | 0.587076 | 3.4:-76765705 | None:intergenic |
| TTCTGGACTAGTTCACATCA+TGG | 0.587628 | 3.4:+76767408 | MS.gene044204:CDS |
| AATGAACCTCCAACTACTGC+AGG | 0.587641 | 3.4:-76764316 | None:intergenic |
| TCAAGTATTCAGATAGTGCT+CGG | 0.588577 | 3.4:+76764956 | MS.gene044204:CDS |
| AGACATTACTCATCCACCTA+TGG | 0.590771 | 3.4:+76761890 | MS.gene044204:CDS |
| ATCCGGCGTTGGTGTGAACA+GGG | 0.591925 | 3.4:-76767431 | None:intergenic |
| GTGGGTGGACCCCATTGTAG+AGG | 0.595584 | 3.4:-76765712 | None:intergenic |
| ATTGGGGAACAGATATTCCA+AGG | 0.599942 | 3.4:-76767374 | None:intergenic |
| CAGTAGATATTAGATTGGCT+CGG | 0.603135 | 3.4:-76765585 | None:intergenic |
| CAATCAGGGTGACAAGGCAA+GGG | 0.605310 | 3.4:+76764225 | MS.gene044204:intron |
| GGCCCTGTTCACACCAACGC+CGG | 0.606687 | 3.4:+76767429 | MS.gene044204:CDS |
| TGAGAAATCTTATCATCACT+GGG | 0.608053 | 3.4:+76767340 | MS.gene044204:CDS |
| ATATAAGGCAGCATCTCGGT+TGG | 0.615741 | 3.4:+76765884 | MS.gene044204:CDS |
| AAAGCAGCAAATATCGGGAA+GGG | 0.616582 | 3.4:-76766641 | None:intergenic |
| TGGGTGGACCCCATTGTAGA+GGG | 0.618510 | 3.4:-76765711 | None:intergenic |
| GATCCTCGACAACACTCTTG+AGG | 0.621370 | 3.4:+76767652 | MS.gene044204:CDS |
| AGCAGGAAACTTACTTCGTG+AGG | 0.623408 | 3.4:-76764400 | None:intergenic |
| AAGATCGAGGAATGCCGTGG+TGG | 0.624077 | 3.4:+76767690 | MS.gene044204:CDS |
| CCTGCTTATGTGTTGAGTCG+TGG | 0.624250 | 3.4:+76765924 | MS.gene044204:CDS |
| TTGATGGTCTTTATGGAACG+GGG | 0.627141 | 3.4:+76766229 | MS.gene044204:CDS |
| GAAAAGTCAAAGAAAGATCG+AGG | 0.629752 | 3.4:+76767677 | MS.gene044204:CDS |
| AGATCGAGGAATGCCGTGGT+GGG | 0.632867 | 3.4:+76767691 | MS.gene044204:CDS |
| TTGTAACACAAATCAAAACC+GGG | 0.635117 | 3.4:-76765477 | None:intergenic |
| TTTCTCGTTCCAGCTATGGG+AGG | 0.636239 | 3.4:+76764050 | MS.gene044204:CDS |
| CCAATGACCAACAACAGCAT+CGG | 0.645264 | 3.4:-76765301 | None:intergenic |
| GTGCATATAAGGCAGCATCT+CGG | 0.646896 | 3.4:+76765880 | MS.gene044204:CDS |
| TTCCAACTCGAGTCAGACCA+AGG | 0.650900 | 3.4:-76766391 | None:intergenic |
| TAATATTCCAGGGAAAATGT+GGG | 0.651365 | 3.4:+76766365 | MS.gene044204:intron |
| GTTCTAAACTTTACCCACCA+CGG | 0.662567 | 3.4:-76767704 | None:intergenic |
| TTCTCATCACCAGCAACAGT+AGG | 0.664170 | 3.4:+76767614 | MS.gene044204:CDS |
| GCGTTTGAGAAGGTCTGTGT+CGG | 0.671196 | 3.4:-76765543 | None:intergenic |
| ACTACAGGTGCCATGCCAAG+AGG | 0.676234 | 3.4:-76765106 | None:intergenic |
| AGAAAGATCGAGGAATGCCG+TGG | 0.682454 | 3.4:+76767687 | MS.gene044204:CDS |
| CGACTCAACACATAAGCAGG+AGG | 0.693627 | 3.4:-76765921 | None:intergenic |
| ACTACGAACACATACCAACA+AGG | 0.708645 | 3.4:-76766682 | None:intergenic |
| AATCCAACGAGGATTTCCCA+CGG | 0.718309 | 3.4:+76765150 | MS.gene044204:CDS |
| TTCCCATACCCTCTACAATG+GGG | 0.726149 | 3.4:+76765703 | MS.gene044204:CDS |
| GGATTAGGATTAATCCAACG+AGG | 0.727664 | 3.4:+76765139 | MS.gene044204:CDS |
| ATCTAATATCTACTGCCCCG+TGG | 0.731953 | 3.4:+76765593 | MS.gene044204:CDS |
| TGAGAGAGAGTACCCCATGG+AGG | 0.733576 | 3.4:-76761951 | None:intergenic |
| CAGAAATCTGAACAACTCTG+CGG | 0.767032 | 3.4:-76766415 | None:intergenic |
| ATAGACTCTAATCCTCCATG+GGG | 0.798674 | 3.4:+76761939 | MS.gene044204:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATATTAAATTTAAACAT+TGG | + | chr3.4:76764451-76764470 | MS.gene044204:intron | 10.0% |
| !! | CACATTATAAATTTATAATA+TGG | - | chr3.4:76764688-76764707 | None:intergenic | 10.0% |
| !! | CATATTATAAATTTATAATG+TGG | + | chr3.4:76764686-76764705 | MS.gene044204:intron | 10.0% |
| !! | GTTTAATTAAGATAAATAAA+GGG | - | chr3.4:76762806-76762825 | None:intergenic | 10.0% |
| !! | TATCTCTTAAAAAAAATAAA+GGG | + | chr3.4:76762101-76762120 | MS.gene044204:intron | 10.0% |
| !! | TGTTTAATTAAGATAAATAA+AGG | - | chr3.4:76762807-76762826 | None:intergenic | 10.0% |
| !! | TTATCTCTTAAAAAAAATAA+AGG | + | chr3.4:76762100-76762119 | MS.gene044204:intron | 10.0% |
| !!! | AACTTATTAAGTTTTTTATT+TGG | + | chr3.4:76764844-76764863 | MS.gene044204:intron | 10.0% |
| !!! | AATATTTTACAACAATTTTA+AGG | + | chr3.4:76767153-76767172 | MS.gene044204:intron | 10.0% |
| !!! | TAATATTTTACTATTTTTCT+GGG | + | chr3.4:76762888-76762907 | MS.gene044204:intron | 10.0% |
| !!! | TATCTTATTAATTTTTCATA+GGG | + | chr3.4:76766192-76766211 | MS.gene044204:intron | 10.0% |
| !!! | TTATCTTATTAATTTTTCAT+AGG | + | chr3.4:76766191-76766210 | MS.gene044204:intron | 10.0% |
| !! | AAAATAATATCACGTATTAT+TGG | - | chr3.4:76767480-76767499 | None:intergenic | 15.0% |
| !! | AAGAATGAAATATAGAAAAT+TGG | + | chr3.4:76763853-76763872 | MS.gene044204:intron | 15.0% |
| !! | AGAATGAAATATAGAAAATT+GGG | + | chr3.4:76763854-76763873 | MS.gene044204:intron | 15.0% |
| !! | GATAATGTAAAGAAAAAATA+TGG | - | chr3.4:76763922-76763941 | None:intergenic | 15.0% |
| !!! | AATATTTTACTATTTTTCTG+GGG | + | chr3.4:76762889-76762908 | MS.gene044204:intron | 15.0% |
| !!! | ACATTTTCTAATTTATTATG+TGG | + | chr3.4:76762685-76762704 | MS.gene044204:intron | 15.0% |
| !!! | ACTTAATAAGTTTATTTCTA+AGG | - | chr3.4:76764836-76764855 | None:intergenic | 15.0% |
| !!! | ATCTTATTAATTTTTCATAG+GGG | + | chr3.4:76766193-76766212 | MS.gene044204:intron | 15.0% |
| !!! | ATTAAGTTTTTTATTTGGTA+GGG | + | chr3.4:76764849-76764868 | MS.gene044204:intron | 15.0% |
| !!! | CTAATATTTTACTATTTTTC+TGG | + | chr3.4:76762887-76762906 | MS.gene044204:intron | 15.0% |
| !!! | TATTAAGTTTTTTATTTGGT+AGG | + | chr3.4:76764848-76764867 | MS.gene044204:intron | 15.0% |
| !!! | TATTCTATCATATTTTACAA+TGG | - | chr3.4:76764531-76764550 | None:intergenic | 15.0% |
| !!! | TTTTTTTAAAAGGAAAACTT+TGG | + | chr3.4:76762455-76762474 | MS.gene044204:intron | 15.0% |
| !! | AAAAAAACATAATGTGATGA+TGG | - | chr3.4:76762535-76762554 | None:intergenic | 20.0% |
| !! | ACATCAATAATAATTCTGAA+TGG | + | chr3.4:76764578-76764597 | MS.gene044204:intron | 20.0% |
| !! | ATAGTTACCAATTATATTAG+AGG | - | chr3.4:76766914-76766933 | None:intergenic | 20.0% |
| !! | ATAGTTCTCACTTTAATATA+TGG | + | chr3.4:76767209-76767228 | MS.gene044204:intron | 20.0% |
| !! | ATATATTAAAGTGAGAACTA+TGG | - | chr3.4:76767210-76767229 | None:intergenic | 20.0% |
| !! | ATATATTGTTGAGATAATGT+GGG | + | chr3.4:76762358-76762377 | MS.gene044204:intron | 20.0% |
| !! | ATTATTAAGACAAACCAATT+TGG | + | chr3.4:76765392-76765411 | MS.gene044204:intron | 20.0% |
| !! | CAAACTATTCAATTACTAAT+AGG | + | chr3.4:76765980-76765999 | MS.gene044204:intron | 20.0% |
| !! | CAAGAAAATAATACATGTAA+GGG | - | chr3.4:76763771-76763790 | None:intergenic | 20.0% |
| !! | CATCAATAATAATTCTGAAT+GGG | + | chr3.4:76764579-76764598 | MS.gene044204:intron | 20.0% |
| !! | CCTTACTTAAATTATAATGT+GGG | + | chr3.4:76763483-76763502 | MS.gene044204:intron | 20.0% |
| !! | CTTACTTAAATTATAATGTG+GGG | + | chr3.4:76763484-76763503 | MS.gene044204:intron | 20.0% |
| !! | GAAACCATGATTAAATATTA+TGG | + | chr3.4:76764551-76764570 | MS.gene044204:intron | 20.0% |
| !! | GTAAAGAAAAAATATGGATA+TGG | - | chr3.4:76763916-76763935 | None:intergenic | 20.0% |
| !! | TAAAACAAGTTTCAAGATTT+GGG | - | chr3.4:76764770-76764789 | None:intergenic | 20.0% |
| !! | TAGTTACCAATTATATTAGA+GGG | - | chr3.4:76766913-76766932 | None:intergenic | 20.0% |
| !! | TATATATTGTTGAGATAATG+TGG | + | chr3.4:76762357-76762376 | MS.gene044204:intron | 20.0% |
| !! | TCAAGAAAATAATACATGTA+AGG | - | chr3.4:76763772-76763791 | None:intergenic | 20.0% |
| !! | TCATTAATAATATAAGCAAC+TGG | - | chr3.4:76764355-76764374 | None:intergenic | 20.0% |
| !! | TCCTTACTTAAATTATAATG+TGG | + | chr3.4:76763482-76763501 | MS.gene044204:intron | 20.0% |
| !! | TTAAAACAAGTTTCAAGATT+TGG | - | chr3.4:76764771-76764790 | None:intergenic | 20.0% |
| !! | TTGTCCATAATATTTAATCA+TGG | - | chr3.4:76764558-76764577 | None:intergenic | 20.0% |
| !! | TTTAATGTCAAAATAGTTCA+GGG | + | chr3.4:76764786-76764805 | MS.gene044204:intron | 20.0% |
| !!! | AAGTAAAGGTACAATTTTTA+TGG | + | chr3.4:76763166-76763185 | MS.gene044204:intron | 20.0% |
| !!! | ATTGTTTTTCATTTCAGTTA+GGG | + | chr3.4:76765257-76765276 | MS.gene044204:intron | 20.0% |
| !!! | ATTTTTATTAAATGCTCCAT+AGG | + | chr3.4:76763101-76763120 | MS.gene044204:intron | 20.0% |
| !!! | TATTGTTTTTCATTTCAGTT+AGG | + | chr3.4:76765256-76765275 | MS.gene044204:intron | 20.0% |
| !!! | TGATTTGTGTTACAATTATT+TGG | + | chr3.4:76765485-76765504 | MS.gene044204:CDS | 20.0% |
| !!! | TGTAATTTTGAAATGCTAAT+AGG | - | chr3.4:76763995-76764014 | None:intergenic | 20.0% |
| !!! | TTACCATTACATTTTCAAAT+GGG | + | chr3.4:76762174-76762193 | MS.gene044204:intron | 20.0% |
| !!! | TTATAATATGGATCTAAAGT+TGG | - | chr3.4:76764676-76764695 | None:intergenic | 20.0% |
| !!! | TTTACCATTACATTTTCAAA+TGG | + | chr3.4:76762173-76762192 | MS.gene044204:intron | 20.0% |
| !!! | TTTTAATGTCAAAATAGTTC+AGG | + | chr3.4:76764785-76764804 | MS.gene044204:intron | 20.0% |
| ! | AAGTTGAAATTCAAACTTAC+AGG | - | chr3.4:76764080-76764099 | None:intergenic | 25.0% |
| ! | AATAATTCTGAATGGGAAAT+AGG | + | chr3.4:76764586-76764605 | MS.gene044204:intron | 25.0% |
| ! | ACAATTAAAATCATCGCTAA+AGG | - | chr3.4:76764185-76764204 | None:intergenic | 25.0% |
| ! | ACCATATTCAAATGATATGA+AGG | + | chr3.4:76767046-76767065 | MS.gene044204:intron | 25.0% |
| ! | AGCAAAGAATATCATAAAAC+CGG | - | chr3.4:76766441-76766460 | None:intergenic | 25.0% |
| ! | ATATTCATACACATGCATAA+AGG | + | chr3.4:76762004-76762023 | MS.gene044204:intron | 25.0% |
| ! | ATTGTAACACAAATCAAAAC+CGG | - | chr3.4:76765481-76765500 | None:intergenic | 25.0% |
| ! | CAGAATTCATTGAAAAATTG+GGG | - | chr3.4:76767393-76767412 | None:intergenic | 25.0% |
| ! | CAGTACAAGAAATTAAGTAA+AGG | + | chr3.4:76763152-76763171 | MS.gene044204:intron | 25.0% |
| ! | CATTAATTTAGACAGTGTTA+AGG | + | chr3.4:76766025-76766044 | MS.gene044204:intron | 25.0% |
| ! | CCAGAATTCATTGAAAAATT+GGG | - | chr3.4:76767394-76767413 | None:intergenic | 25.0% |
| ! | CCCACATTATAATTTAAGTA+AGG | - | chr3.4:76763486-76763505 | None:intergenic | 25.0% |
| ! | CTATTTCCTTAAATCATTCT+CGG | + | chr3.4:76763673-76763692 | MS.gene044204:intron | 25.0% |
| ! | TCACTATAATAAGAGAATCT+GGG | + | chr3.4:76763300-76763319 | MS.gene044204:intron | 25.0% |
| ! | TCCAGAATTCATTGAAAAAT+TGG | - | chr3.4:76767395-76767414 | None:intergenic | 25.0% |
| ! | TCCTTCATATCATTTGAATA+TGG | - | chr3.4:76767050-76767069 | None:intergenic | 25.0% |
| ! | TGGAAATATCATTTACTAGA+TGG | - | chr3.4:76765209-76765228 | None:intergenic | 25.0% |
| ! | TTCACTATAATAAGAGAATC+TGG | + | chr3.4:76763299-76763318 | MS.gene044204:intron | 25.0% |
| ! | TTGAAGAAAGATCTTTGATT+TGG | - | chr3.4:76766784-76766803 | None:intergenic | 25.0% |
| ! | TTGATATTGCGAAAATTCTA+CGG | + | chr3.4:76763788-76763807 | MS.gene044204:intron | 25.0% |
| ! | TTGTATAAAACTGTTACTGT+TGG | - | chr3.4:76763224-76763243 | None:intergenic | 25.0% |
| ! | TTTAAAAGAGTAGAATCCAA+TGG | + | chr3.4:76764717-76764736 | MS.gene044204:intron | 25.0% |
| ! | TTTACATATCATGCTGATAA+AGG | - | chr3.4:76764131-76764150 | None:intergenic | 25.0% |
| !! | AACATTGGTTATTCAAATTC+TGG | + | chr3.4:76764466-76764485 | MS.gene044204:intron | 25.0% |
| !! | AGTTTATGTTTTCCTAGATA+CGG | + | chr3.4:76766934-76766953 | MS.gene044204:intron | 25.0% |
| !! | ATTAATTTTTCATAGGGGAT+TGG | + | chr3.4:76766198-76766217 | MS.gene044204:intron | 25.0% |
| !! | GTAAAGTTTAGAACATTTAG+AGG | + | chr3.4:76767713-76767732 | MS.gene044204:CDS | 25.0% |
| !! | TCTATCATATTTTACAATGG+TGG | - | chr3.4:76764528-76764547 | None:intergenic | 25.0% |
| !! | TTTGATTTCTTGTTCAATCA+GGG | + | chr3.4:76764211-76764230 | MS.gene044204:intron | 25.0% |
| !!! | ATGATATTCTTTGCTACTTT+AGG | + | chr3.4:76766446-76766465 | MS.gene044204:CDS | 25.0% |
| !!! | CAAAATTACATTTTGATGCT+TGG | + | chr3.4:76764005-76764024 | MS.gene044204:CDS | 25.0% |
| !!! | TATCTGTTTTGGCATTTTTA+GGG | + | chr3.4:76764499-76764518 | MS.gene044204:intron | 25.0% |
| !!! | TTATCTGTTTTGGCATTTTT+AGG | + | chr3.4:76764498-76764517 | MS.gene044204:intron | 25.0% |
| AAATAAAAGAAAGCAGAGAG+AGG | - | chr3.4:76763280-76763299 | None:intergenic | 30.0% | |
| AAGAACCTGTTTAGATTGAA+TGG | - | chr3.4:76767770-76767789 | None:intergenic | 30.0% | |
| AAGACAGATTCACTTATTTG+AGG | + | chr3.4:76766556-76766575 | MS.gene044204:intron | 30.0% | |
| AAGATAGGTATGTCTCTAAA+TGG | - | chr3.4:76765448-76765467 | None:intergenic | 30.0% | |
| AATAAAAGAAAGCAGAGAGA+GGG | - | chr3.4:76763279-76763298 | None:intergenic | 30.0% | |
| AATACAAAGCAGCAAATATC+GGG | - | chr3.4:76766649-76766668 | None:intergenic | 30.0% | |
| ACCCACCATTTAATAATGTT+GGG | + | chr3.4:76763196-76763215 | MS.gene044204:intron | 30.0% | |
| ACTTAATGTAATCAGCTCTA+GGG | + | chr3.4:76765341-76765360 | MS.gene044204:intron | 30.0% | |
| AGATGGAAAAAATTAGCATC+AGG | - | chr3.4:76767564-76767583 | None:intergenic | 30.0% | |
| AGTCTTAACTCTTTCGAAAA+TGG | + | chr3.4:76766852-76766871 | MS.gene044204:intron | 30.0% | |
| ATCATTAATTCGTTGCAATG+AGG | - | chr3.4:76764380-76764399 | None:intergenic | 30.0% | |
| ATGAGAAATCTTATCATCAC+TGG | + | chr3.4:76767339-76767358 | MS.gene044204:CDS | 30.0% | |
| CAACCCATTTGAAAATGTAA+TGG | - | chr3.4:76762180-76762199 | None:intergenic | 30.0% | |
| CAATACAAAGCAGCAAATAT+CGG | - | chr3.4:76766650-76766669 | None:intergenic | 30.0% | |
| CAGTTGTTACACTAAATTCT+AGG | + | chr3.4:76763354-76763373 | MS.gene044204:intron | 30.0% | |
| CCAAATCACAAATTTATGTG+AGG | - | chr3.4:76767119-76767138 | None:intergenic | 30.0% | |
| CCTCACATAAATTTGTGATT+TGG | + | chr3.4:76767116-76767135 | MS.gene044204:intron | 30.0% | |
| CTACTTCCCTCTAATATAAT+TGG | + | chr3.4:76766904-76766923 | MS.gene044204:intron | 30.0% | |
| GCTTTGTATTGTGTTCTATT+TGG | + | chr3.4:76766659-76766678 | MS.gene044204:CDS | 30.0% | |
| GGAGGTTTAAATTTAGTCAA+AGG | + | chr3.4:76766133-76766152 | MS.gene044204:intron | 30.0% | |
| GTAACAACTGTTAGAAACAA+GGG | - | chr3.4:76763344-76763363 | None:intergenic | 30.0% | |
| GTACACAGTTTATCGATAAT+AGG | - | chr3.4:76764633-76764652 | None:intergenic | 30.0% | |
| GTATTAGGAAAAAGTAAAGC+AGG | - | chr3.4:76766162-76766181 | None:intergenic | 30.0% | |
| GTGAAACTGAAGATAATTGT+TGG | + | chr3.4:76763017-76763036 | MS.gene044204:intron | 30.0% | |
| TAATATCCACCATATTGATC+AGG | - | chr3.4:76766520-76766539 | None:intergenic | 30.0% | |
| TAATATTCCAGGGAAAATGT+GGG | + | chr3.4:76766365-76766384 | MS.gene044204:intron | 30.0% | |
| TACTGCAATTTACACCAAAT+TGG | - | chr3.4:76765409-76765428 | None:intergenic | 30.0% | |
| TGAACATAACTACTATGTGT+CGG | - | chr3.4:76763646-76763665 | None:intergenic | 30.0% | |
| TGAAGATAATTGTTGGAACT+AGG | + | chr3.4:76763024-76763043 | MS.gene044204:intron | 30.0% | |
| TGAGAAATCTTATCATCACT+GGG | + | chr3.4:76767340-76767359 | MS.gene044204:CDS | 30.0% | |
| TGCTACATGACATGTTAAAA+TGG | - | chr3.4:76762666-76762685 | None:intergenic | 30.0% | |
| TGTAACAACTGTTAGAAACA+AGG | - | chr3.4:76763345-76763364 | None:intergenic | 30.0% | |
| TTAATATTCCAGGGAAAATG+TGG | + | chr3.4:76766364-76766383 | MS.gene044204:intron | 30.0% | |
| TTGTAACACAAATCAAAACC+GGG | - | chr3.4:76765480-76765499 | None:intergenic | 30.0% | |
| ! | AATAGTCACGATTATTTCTC+AGG | + | chr3.4:76765654-76765673 | MS.gene044204:intron | 30.0% |
| ! | AGGTTTCTTTTGATGCTTAT+AGG | + | chr3.4:76765674-76765693 | MS.gene044204:intron | 30.0% |
| ! | ATTTTTCTTCTGTTATCTGC+AGG | + | chr3.4:76766590-76766609 | MS.gene044204:intron | 30.0% |
| ! | CAAAAGATTAGCTAGACAAT+TGG | - | chr3.4:76763522-76763541 | None:intergenic | 30.0% |
| ! | GATGTGTGATTTATCTGTTT+TGG | + | chr3.4:76764488-76764507 | MS.gene044204:intron | 30.0% |
| ! | GTTTGATTTCTTGTTCAATC+AGG | + | chr3.4:76764210-76764229 | MS.gene044204:intron | 30.0% |
| ! | TTCAAATCAACTTGTTTAGC+TGG | + | chr3.4:76762929-76762948 | MS.gene044204:intron | 30.0% |
| !! | CAGTTTTTGAGCATATATTG+AGG | - | chr3.4:76766817-76766836 | None:intergenic | 30.0% |
| !! | CCCAATTTTTCAATGAATTC+TGG | + | chr3.4:76767391-76767410 | MS.gene044204:CDS | 30.0% |
| !! | GAAACGAAATCGTTATTTTG+AGG | - | chr3.4:76765621-76765640 | None:intergenic | 30.0% |
| !! | GTCATTTTGCATAAAACCAT+TGG | - | chr3.4:76764736-76764755 | None:intergenic | 30.0% |
| AAAAAGAGAAATGACCTGCA+TGG | + | chr3.4:76766112-76766131 | MS.gene044204:intron | 35.0% | |
| AACAATCCTGATCAATATGG+TGG | + | chr3.4:76766511-76766530 | MS.gene044204:intron | 35.0% | |
| AAGAGTGACTTACACAGAAA+CGG | - | chr3.4:76766265-76766284 | None:intergenic | 35.0% | |
| AATGAAGCTGGCTAAAAATG+TGG | - | chr3.4:76762757-76762776 | None:intergenic | 35.0% | |
| AATGCATTGAACTGCAAAGA+TGG | - | chr3.4:76767581-76767600 | None:intergenic | 35.0% | |
| AATGCCAGCTACAAAAAGAA+GGG | - | chr3.4:76764260-76764279 | None:intergenic | 35.0% | |
| AATTCTGAATGGGAAATAGG+AGG | + | chr3.4:76764589-76764608 | MS.gene044204:intron | 35.0% | |
| AATTTGTGTCTTTCTCTCTG+AGG | + | chr3.4:76763247-76763266 | MS.gene044204:intron | 35.0% | |
| ACCCCAACATTATTAAATGG+TGG | - | chr3.4:76763201-76763220 | None:intergenic | 35.0% | |
| ACGTATTATTGGACAGTTGT+AGG | - | chr3.4:76767469-76767488 | None:intergenic | 35.0% | |
| ACTTCGTAGGTTATGACTTT+GGG | + | chr3.4:76763740-76763759 | MS.gene044204:intron | 35.0% | |
| AGAAACTAGTAGGAACTGAA+GGG | + | chr3.4:76763047-76763066 | MS.gene044204:intron | 35.0% | |
| AGAATGACCAACAGAAAAAG+TGG | - | chr3.4:76765734-76765753 | None:intergenic | 35.0% | |
| AGAGAAGCCAAAAAATGTGA+AGG | - | chr3.4:76763382-76763401 | None:intergenic | 35.0% | |
| AGCAACAATCCTGATCAATA+TGG | + | chr3.4:76766508-76766527 | MS.gene044204:intron | 35.0% | |
| ATATTAGAGGGAAGTAGTCA+AGG | - | chr3.4:76766901-76766920 | None:intergenic | 35.0% | |
| ATGTGTGATTACAAGTTGCT+TGG | + | chr3.4:76766290-76766309 | MS.gene044204:intron | 35.0% | |
| CATATCATGCTGATAAAGGT+TGG | - | chr3.4:76764127-76764146 | None:intergenic | 35.0% | |
| CCCACCATTTAATAATGTTG+GGG | + | chr3.4:76763197-76763216 | MS.gene044204:intron | 35.0% | |
| CCCCAACATTATTAAATGGT+GGG | - | chr3.4:76763200-76763219 | None:intergenic | 35.0% | |
| CGTATTATTGGACAGTTGTA+GGG | - | chr3.4:76767468-76767487 | None:intergenic | 35.0% | |
| CTAAATTTAAACCTCCATGC+AGG | - | chr3.4:76766129-76766148 | None:intergenic | 35.0% | |
| CTTCAAATTGAAGTCGTGTT+TGG | + | chr3.4:76763594-76763613 | MS.gene044204:intron | 35.0% | |
| CTTTGCCATTCAATCTAAAC+AGG | + | chr3.4:76767762-76767781 | MS.gene044204:CDS | 35.0% | |
| GAAAAGTCAAAGAAAGATCG+AGG | + | chr3.4:76767677-76767696 | MS.gene044204:CDS | 35.0% | |
| GAAAGATATTTGTGCACATG+CGG | - | chr3.4:76767188-76767207 | None:intergenic | 35.0% | |
| GAATGACCAACAGAAAAAGT+GGG | - | chr3.4:76765733-76765752 | None:intergenic | 35.0% | |
| GACCCACCATTTAATAATGT+TGG | + | chr3.4:76763195-76763214 | MS.gene044204:intron | 35.0% | |
| GACTTAATGTAATCAGCTCT+AGG | + | chr3.4:76765340-76765359 | MS.gene044204:intron | 35.0% | |
| GCTAGTAAAGATAATGAAGC+TGG | - | chr3.4:76762769-76762788 | None:intergenic | 35.0% | |
| GGTGTAAATTGCAGTATCTA+AGG | + | chr3.4:76765413-76765432 | MS.gene044204:intron | 35.0% | |
| GTTAACCATATCAAGAACTG+TGG | + | chr3.4:76766956-76766975 | MS.gene044204:intron | 35.0% | |
| TAAAAAGACGTTACTGCCTA+TGG | - | chr3.4:76763120-76763139 | None:intergenic | 35.0% | |
| TAATGCCACAGTTCTTGATA+TGG | - | chr3.4:76766964-76766983 | None:intergenic | 35.0% | |
| TAATGCCAGCTACAAAAAGA+AGG | - | chr3.4:76764261-76764280 | None:intergenic | 35.0% | |
| TACTTCGTAGGTTATGACTT+TGG | + | chr3.4:76763739-76763758 | MS.gene044204:intron | 35.0% | |
| TAGACACCGAGAATGATTTA+AGG | - | chr3.4:76763682-76763701 | None:intergenic | 35.0% | |
| TAGAGTCTATGCAGTATTCA+AGG | - | chr3.4:76761929-76761948 | None:intergenic | 35.0% | |
| TCAAGTATTCAGATAGTGCT+CGG | + | chr3.4:76764956-76764975 | MS.gene044204:CDS | 35.0% | |
| TCACTCTTAAGCAAAACTTC+AGG | - | chr3.4:76762283-76762302 | None:intergenic | 35.0% | |
| TGATATGGTTAACCGTATCT+AGG | - | chr3.4:76766949-76766968 | None:intergenic | 35.0% | |
| TGATATTTCCACATCACAGT+TGG | + | chr3.4:76765218-76765237 | MS.gene044204:intron | 35.0% | |
| TGGACCCCAACATTATTAAA+TGG | - | chr3.4:76763204-76763223 | None:intergenic | 35.0% | |
| TTACAACAATCAGTGCATAG+TGG | - | chr3.4:76766741-76766760 | None:intergenic | 35.0% | |
| TTAGGGAACTGTGTAGAAAT+TGG | + | chr3.4:76765274-76765293 | MS.gene044204:CDS | 35.0% | |
| ! | ACTATGTTTCCTTGTTTACC+AGG | + | chr3.4:76767273-76767292 | MS.gene044204:intron | 35.0% |
| ! | AGTTCAGGGATTTTCACATA+TGG | + | chr3.4:76764800-76764819 | MS.gene044204:intron | 35.0% |
| ! | ATCTTGCTTGATGGTCTTTA+TGG | + | chr3.4:76766222-76766241 | MS.gene044204:CDS | 35.0% |
| ! | CAGTAGATATTAGATTGGCT+CGG | - | chr3.4:76765588-76765607 | None:intergenic | 35.0% |
| ! | CTTAATGTAATCAGCTCTAG+GGG | + | chr3.4:76765342-76765361 | MS.gene044204:intron | 35.0% |
| ! | CTTGTTGATGAACTCTTTCA+TGG | - | chr3.4:76766990-76767009 | None:intergenic | 35.0% |
| ! | GAACTTTCAGTCTCCATTTT+CGG | - | chr3.4:76762327-76762346 | None:intergenic | 35.0% |
| ! | TGTGGTTGGTTAATATTCCA+GGG | + | chr3.4:76766355-76766374 | MS.gene044204:intron | 35.0% |
| !! | ATTAGAAGCACTTGTTTGAC+AGG | + | chr3.4:76766085-76766104 | MS.gene044204:intron | 35.0% |
| !! | TTGATTTGGATGAGTTGCTT+AGG | - | chr3.4:76766770-76766789 | None:intergenic | 35.0% |
| !!! | ATCGTTATTTTGAGGTACCA+CGG | - | chr3.4:76765613-76765632 | None:intergenic | 35.0% |
| !!! | GGAGGATTTTAGTTGAAGAA+AGG | + | chr3.4:76764607-76764626 | MS.gene044204:intron | 35.0% |
| !!! | TTGATCAGGATTGTTGCTTT+TGG | - | chr3.4:76766506-76766525 | None:intergenic | 35.0% |
| AAAGAGTTCATCAACAAGCG+AGG | + | chr3.4:76766992-76767011 | MS.gene044204:intron | 40.0% | |
| AAAGCAGCAAATATCGGGAA+GGG | - | chr3.4:76766644-76766663 | None:intergenic | 40.0% | |
| AACAACGATGAGAATGAAGC+AGG | - | chr3.4:76764420-76764439 | None:intergenic | 40.0% | |
| AAGAGATGTTGCCATGTGAT+TGG | + | chr3.4:76764878-76764897 | MS.gene044204:intron | 40.0% | |
| AATCCAACCAATCCAACTAC+AGG | - | chr3.4:76765124-76765143 | None:intergenic | 40.0% | |
| AATGATAATCCAACTGCACC+TGG | - | chr3.4:76767294-76767313 | None:intergenic | 40.0% | |
| ACCTATCTTTGAACGTTTCC+CGG | + | chr3.4:76765459-76765478 | MS.gene044204:CDS | 40.0% | |
| ACTACGAACACATACCAACA+AGG | - | chr3.4:76766685-76766704 | None:intergenic | 40.0% | |
| AGACATTACTCATCCACCTA+TGG | + | chr3.4:76761890-76761909 | MS.gene044204:CDS | 40.0% | |
| AGAGTTGTTCAGATTTCTGC+CGG | + | chr3.4:76766419-76766438 | MS.gene044204:CDS | 40.0% | |
| AGGTCTTGAAGTTGTTCCAT+AGG | - | chr3.4:76761909-76761928 | None:intergenic | 40.0% | |
| AGTAACTCAGTGTGTTGTGA+GGG | + | chr3.4:76762968-76762987 | MS.gene044204:intron | 40.0% | |
| ATAGACTCTAATCCTCCATG+GGG | + | chr3.4:76761939-76761958 | MS.gene044204:CDS | 40.0% | |
| ATAGCTGGAACGAGAAATGA+AGG | - | chr3.4:76764047-76764066 | None:intergenic | 40.0% | |
| ATAGTTTCAGCTGCAAGACA+AGG | - | chr3.4:76763972-76763991 | None:intergenic | 40.0% | |
| ATCATTTCCTCACTTCACTG+TGG | + | chr3.4:76763943-76763962 | MS.gene044204:intron | 40.0% | |
| ATCTCTGCAAACCAATCACA+TGG | - | chr3.4:76764892-76764911 | None:intergenic | 40.0% | |
| ATTGGGGAACAGATATTCCA+AGG | - | chr3.4:76767377-76767396 | None:intergenic | 40.0% | |
| CAACTGTTAGAAACAAGGGT+AGG | - | chr3.4:76763340-76763359 | None:intergenic | 40.0% | |
| CAATTATGCTGCGTTTGAGA+AGG | - | chr3.4:76765556-76765575 | None:intergenic | 40.0% | |
| CAGAAATCTGAACAACTCTG+CGG | - | chr3.4:76766418-76766437 | None:intergenic | 40.0% | |
| CATACAATGCGAGCTATACA+AGG | + | chr3.4:76764917-76764936 | MS.gene044204:CDS | 40.0% | |
| CATAGACTCTAATCCTCCAT+GGG | + | chr3.4:76761938-76761957 | MS.gene044204:CDS | 40.0% | |
| CGTCTCTTGTCTCTACTATA+AGG | + | chr3.4:76765811-76765830 | MS.gene044204:intron | 40.0% | |
| CTCATCGTTGTTGTGCATTT+AGG | + | chr3.4:76764428-76764447 | MS.gene044204:intron | 40.0% | |
| CTGTTATCTGCAGGAAAGTT+TGG | + | chr3.4:76766599-76766618 | MS.gene044204:intron | 40.0% | |
| GAGAAACTAGTAGGAACTGA+AGG | + | chr3.4:76763046-76763065 | MS.gene044204:intron | 40.0% | |
| GGAATATTAACCAACCACAG+TGG | - | chr3.4:76766354-76766373 | None:intergenic | 40.0% | |
| GGATTAGGATTAATCCAACG+AGG | + | chr3.4:76765139-76765158 | MS.gene044204:CDS | 40.0% | |
| GTGAGACTACTTTGTTACTC+TGG | + | chr3.4:76762299-76762318 | MS.gene044204:intron | 40.0% | |
| TCATTTCTCGTTCCAGCTAT+GGG | + | chr3.4:76764047-76764066 | MS.gene044204:CDS | 40.0% | |
| TCTTGAAGTTGTTCCATAGG+TGG | - | chr3.4:76761906-76761925 | None:intergenic | 40.0% | |
| TGCATAAACCAACTGTGATG+TGG | - | chr3.4:76765229-76765248 | None:intergenic | 40.0% | |
| TGGAACTAGGAGAAACTAGT+AGG | + | chr3.4:76763037-76763056 | MS.gene044204:intron | 40.0% | |
| TTCATTTCTCGTTCCAGCTA+TGG | + | chr3.4:76764046-76764065 | MS.gene044204:CDS | 40.0% | |
| TTGACTGCAAACATGGTACA+TGG | - | chr3.4:76765857-76765876 | None:intergenic | 40.0% | |
| ! | ACACTTCTCCAAGCACTTTT+CGG | + | chr3.4:76764283-76764302 | MS.gene044204:CDS | 40.0% |
| ! | CAAACCCTTCTTTTTGTAGC+TGG | + | chr3.4:76764253-76764272 | MS.gene044204:CDS | 40.0% |
| ! | CTGTGGTTGGTTAATATTCC+AGG | + | chr3.4:76766354-76766373 | MS.gene044204:intron | 40.0% |
| ! | CTTGATGGTCTTTATGGAAC+GGG | + | chr3.4:76766228-76766247 | MS.gene044204:CDS | 40.0% |
| ! | GCTTGATGGTCTTTATGGAA+CGG | + | chr3.4:76766227-76766246 | MS.gene044204:CDS | 40.0% |
| ! | GTGTTAAGGTATCAGTCTTG+TGG | + | chr3.4:76766039-76766058 | MS.gene044204:intron | 40.0% |
| ! | GTTCTAAACTTTACCCACCA+CGG | - | chr3.4:76767707-76767726 | None:intergenic | 40.0% |
| ! | TGTTACTCTGGTTCCGAAAA+TGG | + | chr3.4:76762311-76762330 | MS.gene044204:intron | 40.0% |
| ! | TGTTGCTGGTGATGAGAATA+TGG | - | chr3.4:76767612-76767631 | None:intergenic | 40.0% |
| ! | TTGATGGTCTTTATGGAACG+GGG | + | chr3.4:76766229-76766248 | MS.gene044204:CDS | 40.0% |
| !! | AACCTACGAAGTACTGATAC+AGG | - | chr3.4:76763732-76763751 | None:intergenic | 40.0% |
| !! | ATTTTTCAGTCCTCTTGGCA+TGG | + | chr3.4:76765096-76765115 | MS.gene044204:CDS | 40.0% |
| !! | GTAGTTGGATTGGTTGGATT+AGG | + | chr3.4:76765124-76765143 | MS.gene044204:CDS | 40.0% |
| !! | TGCAGATTTTTCAGTCCTCT+TGG | + | chr3.4:76765091-76765110 | MS.gene044204:intron | 40.0% |
| !! | TGTGTTCTATTTGGCCTTGT+TGG | + | chr3.4:76766668-76766687 | MS.gene044204:CDS | 40.0% |
| !! | TTCTGGACTAGTTCACATCA+TGG | + | chr3.4:76767408-76767427 | MS.gene044204:CDS | 40.0% |
| !!! | AGGATTGTTGCTTTTGGTGT+AGG | - | chr3.4:76766500-76766519 | None:intergenic | 40.0% |
| !!! | CTAGGCACCTTCACATTTTT+TGG | + | chr3.4:76763372-76763391 | MS.gene044204:intron | 40.0% |
| !!! | TCGTTATTTTGAGGTACCAC+GGG | - | chr3.4:76765612-76765631 | None:intergenic | 40.0% |
| AAGAGAAATGACCTGCATGG+AGG | + | chr3.4:76766115-76766134 | MS.gene044204:intron | 45.0% | |
| AAGGTAACCACAGTGAAGTG+AGG | - | chr3.4:76763953-76763972 | None:intergenic | 45.0% | |
| AATCCAACGAGGATTTCCCA+CGG | + | chr3.4:76765150-76765169 | MS.gene044204:CDS | 45.0% | |
| AATGAACCTCCAACTACTGC+AGG | - | chr3.4:76764319-76764338 | None:intergenic | 45.0% | |
| ACCGGGAAACGTTCAAAGAT+AGG | - | chr3.4:76765463-76765482 | None:intergenic | 45.0% | |
| ACGATCAATCCTACTGTTGC+TGG | - | chr3.4:76767626-76767645 | None:intergenic | 45.0% | |
| AGATATTTGTGCACATGCGG+TGG | - | chr3.4:76767185-76767204 | None:intergenic | 45.0% | |
| AGCAGGAAACTTACTTCGTG+AGG | - | chr3.4:76764403-76764422 | None:intergenic | 45.0% | |
| AGTTCTTGTCTCAATGGTGG+AGG | + | chr3.4:76765771-76765790 | MS.gene044204:CDS | 45.0% | |
| ATATAAGGCAGCATCTCGGT+TGG | + | chr3.4:76765884-76765903 | MS.gene044204:CDS | 45.0% | |
| ATCTAATATCTACTGCCCCG+TGG | + | chr3.4:76765593-76765612 | MS.gene044204:CDS | 45.0% | |
| CAAAGCAGCAAATATCGGGA+AGG | - | chr3.4:76766645-76766664 | None:intergenic | 45.0% | |
| CAAGGGTAGGACATGTAACA+TGG | - | chr3.4:76763327-76763346 | None:intergenic | 45.0% | |
| CAGTAACTCAGTGTGTTGTG+AGG | + | chr3.4:76762967-76762986 | MS.gene044204:intron | 45.0% | |
| CCAATGACCAACAACAGCAT+CGG | - | chr3.4:76765304-76765323 | None:intergenic | 45.0% | |
| CGGGGCAGTAGATATTAGAT+TGG | - | chr3.4:76765593-76765612 | None:intergenic | 45.0% | |
| CTATGATAGCTTGACCACTG+TGG | + | chr3.4:76766337-76766356 | MS.gene044204:intron | 45.0% | |
| CTTGTTCAATCAGGGTGACA+AGG | + | chr3.4:76764219-76764238 | MS.gene044204:intron | 45.0% | |
| GACAAGAACTGCAGACATCA+TGG | - | chr3.4:76765761-76765780 | None:intergenic | 45.0% | |
| GCAGTCAACTGGTGCATATA+AGG | + | chr3.4:76765869-76765888 | MS.gene044204:intron | 45.0% | |
| GCATAGACTCTAATCCTCCA+TGG | + | chr3.4:76761937-76761956 | MS.gene044204:CDS | 45.0% | |
| GTACCATGTTTGCAGTCAAC+TGG | + | chr3.4:76765858-76765877 | MS.gene044204:intron | 45.0% | |
| GTCTGCAGTTCTTGTCTCAA+TGG | + | chr3.4:76765765-76765784 | MS.gene044204:CDS | 45.0% | |
| GTGCATATAAGGCAGCATCT+CGG | + | chr3.4:76765880-76765899 | MS.gene044204:CDS | 45.0% | |
| GTTCCCATACCCTCTACAAT+GGG | + | chr3.4:76765702-76765721 | MS.gene044204:CDS | 45.0% | |
| TACAGGCATGGACATCACAT+CGG | - | chr3.4:76763715-76763734 | None:intergenic | 45.0% | |
| TATGTGTTGAGTCGTGGCAT+TGG | + | chr3.4:76765930-76765949 | MS.gene044204:CDS | 45.0% | |
| TCTGTCATCTTGACTGCTAG+TGG | + | chr3.4:76765514-76765533 | MS.gene044204:CDS | 45.0% | |
| TGACCAACAGAAAAAGTGGG+TGG | - | chr3.4:76765730-76765749 | None:intergenic | 45.0% | |
| TGCAGTTCTTGTCTCAATGG+TGG | + | chr3.4:76765768-76765787 | MS.gene044204:CDS | 45.0% | |
| TGCCTGTATCAGTACTTCGT+AGG | + | chr3.4:76763727-76763746 | MS.gene044204:intron | 45.0% | |
| TGGAATACCGATGCTGTTGT+TGG | + | chr3.4:76765294-76765313 | MS.gene044204:CDS | 45.0% | |
| TGGTTGGCAGGTAAATCACT+TGG | + | chr3.4:76765950-76765969 | MS.gene044204:intron | 45.0% | |
| TGTTCCCATACCCTCTACAA+TGG | + | chr3.4:76765701-76765720 | MS.gene044204:CDS | 45.0% | |
| TTCCCATACCCTCTACAATG+GGG | + | chr3.4:76765703-76765722 | MS.gene044204:CDS | 45.0% | |
| TTCTCATCACCAGCAACAGT+AGG | + | chr3.4:76767614-76767633 | MS.gene044204:CDS | 45.0% | |
| ! | GGGATTGGTATCTTGCTTGA+TGG | + | chr3.4:76766213-76766232 | MS.gene044204:CDS | 45.0% |
| ! | GTGTCTTTCTCTCTGAGGAT+AGG | + | chr3.4:76763252-76763271 | MS.gene044204:intron | 45.0% |
| ! | TTGAAGTGTCAGTGCTACAC+AGG | - | chr3.4:76763580-76763599 | None:intergenic | 45.0% |
| !! | ACGAAGTACTGATACAGGCA+TGG | - | chr3.4:76763727-76763746 | None:intergenic | 45.0% |
| !! | GTCTTGTTCCGAAAAGTGCT+TGG | - | chr3.4:76764294-76764313 | None:intergenic | 45.0% |
| !!! | CGTTATTTTGAGGTACCACG+GGG | - | chr3.4:76765611-76765630 | None:intergenic | 45.0% |
| !! | AAAAAATTAAACATATATTA+AGG | - | chr3.4:76764103-76764122 | None:intergenic | 5.0% |
| !!! | AAAAAAAACATTTTTTTAAA+AGG | + | chr3.4:76762445-76762464 | MS.gene044204:intron | 5.0% |
| !!! | ATTTAATTTTAAAAATCTAA+CGG | - | chr3.4:76762397-76762416 | None:intergenic | 5.0% |
| ACAAGACTGCCTGCAGTAGT+TGG | + | chr3.4:76764307-76764326 | MS.gene044204:CDS | 50.0% | |
| ACAGGATTTCCTCCCATAGC+TGG | - | chr3.4:76764062-76764081 | None:intergenic | 50.0% | |
| AGAAAGATCGAGGAATGCCG+TGG | + | chr3.4:76767687-76767706 | MS.gene044204:CDS | 50.0% | |
| AGGGAAAATGTGGGACTCCT+TGG | + | chr3.4:76766374-76766393 | MS.gene044204:intron | 50.0% | |
| ATTTGAGCCACACCTACCGT+GGG | - | chr3.4:76765169-76765188 | None:intergenic | 50.0% | |
| CAATCAGGGTGACAAGGCAA+GGG | + | chr3.4:76764225-76764244 | MS.gene044204:intron | 50.0% | |
| CATGGCACCTGTAGTTGGAT+TGG | + | chr3.4:76765114-76765133 | MS.gene044204:CDS | 50.0% | |
| CCAACTGCACCTGGTAAACA+AGG | - | chr3.4:76767285-76767304 | None:intergenic | 50.0% | |
| CCACGACTCAACACATAAGC+AGG | - | chr3.4:76765927-76765946 | None:intergenic | 50.0% | |
| CCGATGCTGTTGTTGGTCAT+TGG | + | chr3.4:76765301-76765320 | MS.gene044204:CDS | 50.0% | |
| CCTGCTTATGTGTTGAGTCG+TGG | + | chr3.4:76765924-76765943 | MS.gene044204:CDS | 50.0% | |
| CGACTCAACACATAAGCAGG+AGG | - | chr3.4:76765924-76765943 | None:intergenic | 50.0% | |
| CTCAACACATAAGCAGGAGG+TGG | - | chr3.4:76765921-76765940 | None:intergenic | 50.0% | |
| GATAGCTTGACCACTGTGGT+TGG | + | chr3.4:76766341-76766360 | MS.gene044204:intron | 50.0% | |
| GATCCTCGACAACACTCTTG+AGG | + | chr3.4:76767652-76767671 | MS.gene044204:CDS | 50.0% | |
| GCACCAGTTGACTGCAAACA+TGG | - | chr3.4:76765864-76765883 | None:intergenic | 50.0% | |
| GCGTTTGAGAAGGTCTGTGT+CGG | - | chr3.4:76765546-76765565 | None:intergenic | 50.0% | |
| GTAGGGAAAACACACCCATC+CGG | - | chr3.4:76767451-76767470 | None:intergenic | 50.0% | |
| TCAATCAGGGTGACAAGGCA+AGG | + | chr3.4:76764224-76764243 | MS.gene044204:intron | 50.0% | |
| TCGAAAAAAGTCCCCAGACC+TGG | - | chr3.4:76764988-76765007 | None:intergenic | 50.0% | |
| TGGTCTTTATGGAACGGGGA+CGG | + | chr3.4:76766233-76766252 | MS.gene044204:CDS | 50.0% | |
| TTCCAACTCGAGTCAGACCA+AGG | - | chr3.4:76766394-76766413 | None:intergenic | 50.0% | |
| TTTCTCGTTCCAGCTATGGG+AGG | + | chr3.4:76764050-76764069 | MS.gene044204:CDS | 50.0% | |
| ! | AAGGAGTCCCACATTTTCCC+TGG | - | chr3.4:76766375-76766394 | None:intergenic | 50.0% |
| ! | CCTTGTTTACCAGGTGCAGT+TGG | + | chr3.4:76767282-76767301 | MS.gene044204:intron | 50.0% |
| ! | GACCCCATTGTAGAGGGTAT+GGG | - | chr3.4:76765708-76765727 | None:intergenic | 50.0% |
| !! | AGATGAGAGAGAGTACCCCA+TGG | - | chr3.4:76761957-76761976 | None:intergenic | 50.0% |
| !! | CAACCTCAAGAGTGTTGTCG+AGG | - | chr3.4:76767658-76767677 | None:intergenic | 50.0% |
| !! | GCACCTGTAGTTGGATTGGT+TGG | + | chr3.4:76765118-76765137 | MS.gene044204:CDS | 50.0% |
| !! | TGTTGAGTCGTGGCATTGGT+TGG | + | chr3.4:76765934-76765953 | MS.gene044204:CDS | 50.0% |
| !!! | AGGTCTGGGGACTTTTTTCG+AGG | + | chr3.4:76764987-76765006 | MS.gene044204:CDS | 50.0% |
| !!! | GGTCCACCCACTTTTTCTGT+TGG | + | chr3.4:76765724-76765743 | MS.gene044204:CDS | 50.0% |
| AAAACACACCCATCCGGCGT+TGG | - | chr3.4:76767445-76767464 | None:intergenic | 55.0% | |
| AAGATCGAGGAATGCCGTGG+TGG | + | chr3.4:76767690-76767709 | MS.gene044204:CDS | 55.0% | |
| ACTGGGCTCACACTGTTCCT+TGG | + | chr3.4:76767357-76767376 | MS.gene044204:CDS | 55.0% | |
| AGACTGCCTGCAGTAGTTGG+AGG | + | chr3.4:76764310-76764329 | MS.gene044204:CDS | 55.0% | |
| AGATCGAGGAATGCCGTGGT+GGG | + | chr3.4:76767691-76767710 | MS.gene044204:CDS | 55.0% | |
| AGGATTTCCCACGGTAGGTG+TGG | + | chr3.4:76765159-76765178 | MS.gene044204:intron | 55.0% | |
| CAACGAGGATTTCCCACGGT+AGG | + | chr3.4:76765154-76765173 | MS.gene044204:intron | 55.0% | |
| CACATAAGCAGGAGGTGGAG+TGG | - | chr3.4:76765916-76765935 | None:intergenic | 55.0% | |
| CTACCGTGGGAAATCCTCGT+TGG | - | chr3.4:76765156-76765175 | None:intergenic | 55.0% | |
| CTTGGCATGGCACCTGTAGT+TGG | + | chr3.4:76765109-76765128 | MS.gene044204:CDS | 55.0% | |
| GATAGTGCTCGGTTACAGCC+AGG | + | chr3.4:76764967-76764986 | MS.gene044204:CDS | 55.0% | |
| GATTTGAGCCACACCTACCG+TGG | - | chr3.4:76765170-76765189 | None:intergenic | 55.0% | |
| GGACCCCATTGTAGAGGGTA+TGG | - | chr3.4:76765709-76765728 | None:intergenic | 55.0% | |
| GGTCTTTATGGAACGGGGAC+GGG | + | chr3.4:76766234-76766253 | MS.gene044204:CDS | 55.0% | |
| TGGGTGGACCCCATTGTAGA+GGG | - | chr3.4:76765714-76765733 | None:intergenic | 55.0% | |
| TGTTCACACCAACGCCGGAT+GGG | + | chr3.4:76767434-76767453 | MS.gene044204:CDS | 55.0% | |
| ! | ACTACAGGTGCCATGCCAAG+AGG | - | chr3.4:76765109-76765128 | None:intergenic | 55.0% |
| ! | CTCCTTGGTCTGACTCGAGT+TGG | + | chr3.4:76766389-76766408 | MS.gene044204:CDS | 55.0% |
| !! | ATCCGGCGTTGGTGTGAACA+GGG | - | chr3.4:76767434-76767453 | None:intergenic | 55.0% |
| !! | TGAGAGAGAGTACCCCATGG+AGG | - | chr3.4:76761954-76761973 | None:intergenic | 55.0% |
| CTCGGTTACAGCCAGGTCTG+GGG | + | chr3.4:76764974-76764993 | MS.gene044204:CDS | 60.0% | |
| CTGTTCACACCAACGCCGGA+TGG | + | chr3.4:76767433-76767452 | MS.gene044204:CDS | 60.0% | |
| GCTCGGTTACAGCCAGGTCT+GGG | + | chr3.4:76764973-76764992 | MS.gene044204:CDS | 60.0% | |
| GTGGGTGGACCCCATTGTAG+AGG | - | chr3.4:76765715-76765734 | None:intergenic | 60.0% | |
| TGCTCGGTTACAGCCAGGTC+TGG | + | chr3.4:76764972-76764991 | MS.gene044204:CDS | 60.0% | |
| !! | CATCCGGCGTTGGTGTGAAC+AGG | - | chr3.4:76767435-76767454 | None:intergenic | 60.0% |
| !! | GAGTCGTGGCATTGGTTGGC+AGG | + | chr3.4:76765938-76765957 | MS.gene044204:CDS | 60.0% |
| GGCCCTGTTCACACCAACGC+CGG | + | chr3.4:76767429-76767448 | MS.gene044204:CDS | 65.0% | |
| !! | GTTTGGTGCGCGACGCGTGT+CGG | + | chr3.4:76763611-76763630 | MS.gene044204:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 76761885 | 76767802 | 76761885 | ID=MS.gene044204 |
| chr3.4 | mRNA | 76761885 | 76767802 | 76761885 | ID=MS.gene044204.t1;Parent=MS.gene044204 |
| chr3.4 | exon | 76761885 | 76761960 | 76761885 | ID=MS.gene044204.t1.exon1;Parent=MS.gene044204.t1 |
| chr3.4 | CDS | 76761885 | 76761960 | 76761885 | ID=cds.MS.gene044204.t1;Parent=MS.gene044204.t1 |
| chr3.4 | exon | 76763982 | 76764079 | 76763982 | ID=MS.gene044204.t1.exon2;Parent=MS.gene044204.t1 |
| chr3.4 | CDS | 76763982 | 76764079 | 76763982 | ID=cds.MS.gene044204.t1;Parent=MS.gene044204.t1 |
| chr3.4 | exon | 76764232 | 76764408 | 76764232 | ID=MS.gene044204.t1.exon3;Parent=MS.gene044204.t1 |
| chr3.4 | CDS | 76764232 | 76764408 | 76764232 | ID=cds.MS.gene044204.t1;Parent=MS.gene044204.t1 |
| chr3.4 | exon | 76764908 | 76765008 | 76764908 | ID=MS.gene044204.t1.exon4;Parent=MS.gene044204.t1 |
| chr3.4 | CDS | 76764908 | 76765008 | 76764908 | ID=cds.MS.gene044204.t1;Parent=MS.gene044204.t1 |
| chr3.4 | exon | 76765096 | 76765171 | 76765096 | ID=MS.gene044204.t1.exon5;Parent=MS.gene044204.t1 |
| chr3.4 | CDS | 76765096 | 76765171 | 76765096 | ID=cds.MS.gene044204.t1;Parent=MS.gene044204.t1 |
| chr3.4 | exon | 76765274 | 76765333 | 76765274 | ID=MS.gene044204.t1.exon6;Parent=MS.gene044204.t1 |
| chr3.4 | CDS | 76765274 | 76765333 | 76765274 | ID=cds.MS.gene044204.t1;Parent=MS.gene044204.t1 |
| chr3.4 | exon | 76765427 | 76765614 | 76765427 | ID=MS.gene044204.t1.exon7;Parent=MS.gene044204.t1 |
| chr3.4 | CDS | 76765427 | 76765614 | 76765427 | ID=cds.MS.gene044204.t1;Parent=MS.gene044204.t1 |
| chr3.4 | exon | 76765696 | 76765792 | 76765696 | ID=MS.gene044204.t1.exon8;Parent=MS.gene044204.t1 |
| chr3.4 | CDS | 76765696 | 76765792 | 76765696 | ID=cds.MS.gene044204.t1;Parent=MS.gene044204.t1 |
| chr3.4 | exon | 76765873 | 76765959 | 76765873 | ID=MS.gene044204.t1.exon9;Parent=MS.gene044204.t1 |
| chr3.4 | CDS | 76765873 | 76765959 | 76765873 | ID=cds.MS.gene044204.t1;Parent=MS.gene044204.t1 |
| chr3.4 | exon | 76766213 | 76766271 | 76766213 | ID=MS.gene044204.t1.exon10;Parent=MS.gene044204.t1 |
| chr3.4 | CDS | 76766213 | 76766271 | 76766213 | ID=cds.MS.gene044204.t1;Parent=MS.gene044204.t1 |
| chr3.4 | exon | 76766376 | 76766467 | 76766376 | ID=MS.gene044204.t1.exon11;Parent=MS.gene044204.t1 |
| chr3.4 | CDS | 76766376 | 76766467 | 76766376 | ID=cds.MS.gene044204.t1;Parent=MS.gene044204.t1 |
| chr3.4 | exon | 76766612 | 76766689 | 76766612 | ID=MS.gene044204.t1.exon12;Parent=MS.gene044204.t1 |
| chr3.4 | CDS | 76766612 | 76766689 | 76766612 | ID=cds.MS.gene044204.t1;Parent=MS.gene044204.t1 |
| chr3.4 | exon | 76767295 | 76767455 | 76767295 | ID=MS.gene044204.t1.exon13;Parent=MS.gene044204.t1 |
| chr3.4 | CDS | 76767295 | 76767455 | 76767295 | ID=cds.MS.gene044204.t1;Parent=MS.gene044204.t1 |
| chr3.4 | exon | 76767590 | 76767802 | 76767590 | ID=MS.gene044204.t1.exon14;Parent=MS.gene044204.t1 |
| chr3.4 | CDS | 76767590 | 76767802 | 76767590 | ID=cds.MS.gene044204.t1;Parent=MS.gene044204.t1 |
| Gene Sequence |
| Protein sequence |
