Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25800.t1 | XP_003601408.2 | 99.8 | 520 | 1 | 0 | 1 | 520 | 1 | 520 | 4.00E-299 | 1036.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25800.t1 | Q9SHZ3 | 86.7 | 520 | 69 | 0 | 1 | 520 | 1 | 520 | 5.7e-270 | 931.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25800.t1 | G7J799 | 99.8 | 520 | 1 | 0 | 1 | 520 | 1 | 520 | 2.9e-299 | 1036.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene25800 | MS.gene53408 | PPI |
MS.gene25800 | MS.gene43290 | PPI |
MS.gene70604 | MS.gene25800 | PPI |
MS.gene022275 | MS.gene25800 | PPI |
MS.gene25800 | MS.gene71606 | PPI |
MS.gene56947 | MS.gene25800 | PPI |
MS.gene25800 | MS.gene27811 | PPI |
MS.gene25800 | MS.gene023585 | PPI |
MS.gene86930 | MS.gene25800 | PPI |
MS.gene25800 | MS.gene24355 | PPI |
MS.gene043994 | MS.gene25800 | PPI |
MS.gene074377 | MS.gene25800 | PPI |
MS.gene25800 | MS.gene27812 | PPI |
MS.gene67081 | MS.gene25800 | PPI |
MS.gene25932 | MS.gene25800 | PPI |
MS.gene25800 | MS.gene91317 | PPI |
MS.gene25800 | MS.gene058853 | PPI |
MS.gene25800 | MS.gene60344 | PPI |
MS.gene033221 | MS.gene25800 | PPI |
MS.gene25800 | MS.gene96701 | PPI |
MS.gene25800 | MS.gene062755 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25800.t1 | MTR_3g080390 | 99.808 | 520 | 1 | 0 | 1 | 520 | 1 | 520 | 0.0 | 1051 |
MS.gene25800.t1 | MTR_8g086520 | 72.780 | 518 | 140 | 1 | 3 | 520 | 8 | 524 | 0.0 | 794 |
MS.gene25800.t1 | MTR_2g016460 | 69.305 | 518 | 158 | 1 | 3 | 520 | 8 | 524 | 0.0 | 761 |
MS.gene25800.t1 | MTR_8g086520 | 72.545 | 448 | 122 | 1 | 3 | 450 | 8 | 454 | 0.0 | 678 |
MS.gene25800.t1 | MTR_8g086520 | 73.267 | 404 | 107 | 1 | 117 | 520 | 6 | 408 | 0.0 | 623 |
MS.gene25800.t1 | MTR_3g078270 | 59.223 | 515 | 207 | 2 | 6 | 518 | 17 | 530 | 0.0 | 611 |
MS.gene25800.t1 | MTR_8g063220 | 58.058 | 515 | 213 | 2 | 6 | 518 | 18 | 531 | 0.0 | 610 |
MS.gene25800.t1 | MTR_8g086520 | 73.418 | 395 | 104 | 1 | 3 | 397 | 8 | 401 | 0.0 | 601 |
MS.gene25800.t1 | MTR_4g106750 | 57.864 | 515 | 214 | 2 | 6 | 518 | 17 | 530 | 0.0 | 598 |
MS.gene25800.t1 | MTR_1g021120 | 58.366 | 514 | 213 | 1 | 5 | 518 | 33 | 545 | 0.0 | 593 |
MS.gene25800.t1 | MTR_5g035180 | 56.008 | 516 | 223 | 3 | 6 | 518 | 22 | 536 | 0.0 | 582 |
MS.gene25800.t1 | MTR_4g106750 | 57.884 | 482 | 200 | 2 | 39 | 518 | 1 | 481 | 0.0 | 553 |
MS.gene25800.t1 | MTR_3g103230 | 50.870 | 517 | 248 | 3 | 4 | 518 | 40 | 552 | 0.0 | 547 |
MS.gene25800.t1 | MTR_1g106085 | 54.951 | 515 | 226 | 3 | 6 | 518 | 15 | 525 | 0.0 | 545 |
MS.gene25800.t1 | MTR_5g022110 | 51.550 | 516 | 242 | 4 | 6 | 518 | 35 | 545 | 0.0 | 531 |
MS.gene25800.t1 | MTR_4g106750 | 57.453 | 369 | 154 | 2 | 152 | 518 | 11 | 378 | 6.25e-148 | 429 |
MS.gene25800.t1 | MTR_8g068550 | 37.873 | 536 | 296 | 6 | 14 | 517 | 225 | 755 | 1.82e-116 | 361 |
MS.gene25800.t1 | MTR_2g084895 | 38.361 | 537 | 292 | 6 | 15 | 517 | 147 | 678 | 8.77e-109 | 339 |
MS.gene25800.t1 | MTR_5g032020 | 37.406 | 532 | 296 | 5 | 14 | 513 | 167 | 693 | 1.57e-106 | 333 |
MS.gene25800.t1 | MTR_4g055290 | 36.872 | 537 | 295 | 7 | 15 | 517 | 154 | 680 | 7.21e-102 | 321 |
MS.gene25800.t1 | MTR_2g103510 | 36.224 | 519 | 294 | 7 | 15 | 517 | 94 | 591 | 4.21e-101 | 317 |
MS.gene25800.t1 | MTR_8g086535 | 81.000 | 100 | 19 | 0 | 298 | 397 | 18 | 117 | 4.28e-46 | 157 |
MS.gene25800.t1 | MTR_5g042660 | 80.357 | 56 | 11 | 0 | 451 | 506 | 39 | 94 | 1.19e-25 | 101 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25800.t1 | AT2G05760 | 86.731 | 520 | 69 | 0 | 1 | 520 | 1 | 520 | 0.0 | 946 |
MS.gene25800.t1 | AT2G34190 | 69.498 | 518 | 157 | 1 | 3 | 520 | 8 | 524 | 0.0 | 775 |
MS.gene25800.t1 | AT5G62890 | 58.140 | 516 | 211 | 3 | 6 | 518 | 17 | 530 | 0.0 | 600 |
MS.gene25800.t1 | AT5G62890 | 58.140 | 516 | 211 | 3 | 6 | 518 | 17 | 530 | 0.0 | 600 |
MS.gene25800.t1 | AT5G62890 | 58.140 | 516 | 211 | 3 | 6 | 518 | 17 | 530 | 0.0 | 600 |
MS.gene25800.t1 | AT1G60030 | 56.395 | 516 | 220 | 3 | 6 | 518 | 23 | 536 | 0.0 | 597 |
MS.gene25800.t1 | AT2G26510 | 57.087 | 515 | 219 | 2 | 5 | 518 | 34 | 547 | 0.0 | 588 |
MS.gene25800.t1 | AT5G49990 | 57.864 | 515 | 214 | 2 | 6 | 518 | 13 | 526 | 0.0 | 582 |
MS.gene25800.t1 | AT5G49990 | 57.864 | 515 | 214 | 2 | 6 | 518 | 13 | 526 | 0.0 | 582 |
MS.gene25800.t1 | AT5G49990 | 57.864 | 515 | 214 | 2 | 6 | 518 | 13 | 526 | 0.0 | 582 |
MS.gene25800.t1 | AT5G49990 | 57.864 | 515 | 214 | 2 | 6 | 518 | 13 | 526 | 0.0 | 582 |
MS.gene25800.t1 | AT1G10540 | 53.578 | 517 | 236 | 3 | 6 | 518 | 21 | 537 | 0.0 | 563 |
MS.gene25800.t1 | AT1G49960 | 56.420 | 514 | 221 | 2 | 7 | 518 | 12 | 524 | 0.0 | 556 |
MS.gene25800.t1 | AT1G65550 | 48.762 | 525 | 251 | 5 | 6 | 518 | 21 | 539 | 0.0 | 527 |
MS.gene25800.t1 | AT5G62890 | 58.296 | 446 | 183 | 2 | 6 | 450 | 17 | 460 | 0.0 | 519 |
MS.gene25800.t1 | AT2G26510 | 58.583 | 367 | 151 | 1 | 5 | 371 | 34 | 399 | 1.34e-144 | 422 |
MS.gene25800.t1 | AT2G26510 | 58.873 | 355 | 143 | 2 | 5 | 358 | 34 | 386 | 2.81e-139 | 409 |
MS.gene25800.t1 | AT1G10540 | 53.533 | 368 | 169 | 2 | 6 | 371 | 21 | 388 | 9.59e-134 | 394 |
MS.gene25800.t1 | AT5G25420 | 43.155 | 431 | 176 | 6 | 6 | 436 | 33 | 394 | 2.67e-118 | 355 |
MS.gene25800.t1 | AT2G27810 | 38.547 | 537 | 292 | 6 | 15 | 517 | 169 | 701 | 1.65e-102 | 323 |
MS.gene25800.t1 | AT4G38050 | 37.009 | 535 | 300 | 6 | 15 | 517 | 175 | 704 | 3.44e-99 | 315 |
MS.gene25800.t1 | AT2G27810 | 36.898 | 561 | 292 | 7 | 15 | 517 | 169 | 725 | 2.60e-97 | 310 |
MS.gene25800.t1 | AT2G27810 | 39.953 | 423 | 234 | 4 | 15 | 419 | 169 | 589 | 6.36e-82 | 266 |
MS.gene25800.t1 | AT2G27810 | 39.894 | 376 | 206 | 4 | 15 | 372 | 169 | 542 | 2.32e-69 | 232 |
Find 131 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCTTGCTTGATGGTCTTTA+TGG | 0.167803 | 3.2:+70547899 | MS.gene25800:CDS |
TGATTTGTGTTACAATTATT+TGG | 0.191778 | 3.2:+70547162 | MS.gene25800:CDS |
GCTTTGTATTGTGTTCTATT+TGG | 0.230280 | 3.2:+70548336 | MS.gene25800:CDS |
CTGTTATCTGCAGGAAAGTT+TGG | 0.239227 | 3.2:+70548276 | MS.gene25800:intron |
ATGATATTCTTTGCTACTTT+AGG | 0.245870 | 3.2:+70548123 | MS.gene25800:CDS |
ACCTATCTTTGAACGTTTCC+CGG | 0.294152 | 3.2:+70547136 | MS.gene25800:CDS |
CATCCGGCGTTGGTGTGAAC+AGG | 0.321205 | 3.2:-70549101 | None:intergenic |
TTAGGGAACTGTGTAGAAAT+TGG | 0.337078 | 3.2:+70546956 | MS.gene25800:CDS |
CTTGATGGTCTTTATGGAAC+GGG | 0.342480 | 3.2:+70547905 | MS.gene25800:CDS |
TGTTGCTGGTGATGAGAATA+TGG | 0.345149 | 3.2:-70549278 | None:intergenic |
TGTGTTCTATTTGGCCTTGT+TGG | 0.347283 | 3.2:+70548345 | MS.gene25800:CDS |
GTAGTTGGATTGGTTGGATT+AGG | 0.352915 | 3.2:+70546806 | MS.gene25800:CDS |
TGCTCGGTTACAGCCAAGTC+TGG | 0.357898 | 3.2:+70546654 | MS.gene25800:CDS |
CTTGGCATGGCACCTGTAGT+TGG | 0.360665 | 3.2:+70546791 | MS.gene25800:CDS |
CAATACAAAGCAGCAAATAT+CGG | 0.366880 | 3.2:-70548324 | None:intergenic |
CTTTGCCATTCAATCTAAAC+AGG | 0.372791 | 3.2:+70549431 | MS.gene25800:CDS |
TTCATTTCTCGTTCCAGCTA+TGG | 0.373673 | 3.2:+70545728 | MS.gene25800:CDS |
GGTGTAAATTGCAGTATCTA+AGG | 0.385923 | 3.2:+70547090 | MS.gene25800:intron |
ATTGTAACACAAATCAAAAC+CGG | 0.389430 | 3.2:-70547155 | None:intergenic |
GCAGTCAACTGGTGCATATA+AGG | 0.392894 | 3.2:+70547546 | MS.gene25800:intron |
AAGATAGGTATGTCTCTAAA+TGG | 0.403795 | 3.2:-70547122 | None:intergenic |
CCGATGCTGTTGTTGGTCAT+TGG | 0.404111 | 3.2:+70546983 | MS.gene25800:CDS |
GGGATTGGTATCTTGCTTGA+TGG | 0.404600 | 3.2:+70547890 | MS.gene25800:CDS |
AGCAAAGAATATCATAAAAC+CGG | 0.417694 | 3.2:-70548115 | None:intergenic |
ATGAGAAATCTTATCATCAC+TGG | 0.421345 | 3.2:+70549008 | MS.gene25800:CDS |
AAGAACCTGTTTAGATTGAA+TGG | 0.421526 | 3.2:-70549436 | None:intergenic |
GTCTGCAGTTCTTGTCTCAA+TGG | 0.428983 | 3.2:+70547442 | MS.gene25800:CDS |
GGTCTTTATGGAACGGGGAC+GGG | 0.434224 | 3.2:+70547911 | MS.gene25800:CDS |
AGGGAAAATGTGGGACTCCT+TGG | 0.438130 | 3.2:+70548051 | MS.gene25800:intron |
GTAAAGTTTAGAACATTTAG+AGG | 0.439217 | 3.2:+70549382 | MS.gene25800:CDS |
ACCGGGAAACGTTCAAAGAT+AGG | 0.442921 | 3.2:-70547137 | None:intergenic |
ACAGGATTTCCTCCCATAGC+TGG | 0.452387 | 3.2:-70545741 | None:intergenic |
ACGATCAATCCTACTGTTGC+TGG | 0.453105 | 3.2:-70549292 | None:intergenic |
TCATTTCTCGTTCCAGCTAT+GGG | 0.459805 | 3.2:+70545729 | MS.gene25800:CDS |
CATGGCACCTGTAGTTGGAT+TGG | 0.460391 | 3.2:+70546796 | MS.gene25800:CDS |
GGACCCCATTGTAGAGGGTA+TGG | 0.463266 | 3.2:-70547383 | None:intergenic |
ACTGGGCTCACATTGTTCCT+TGG | 0.466494 | 3.2:+70549026 | MS.gene25800:CDS |
GCACCTGTAGTTGGATTGGT+TGG | 0.471696 | 3.2:+70546800 | MS.gene25800:CDS |
TGGTCTTTATGGAACGGGGA+CGG | 0.471826 | 3.2:+70547910 | MS.gene25800:CDS |
CTGTTCACACCAACGCCGGA+TGG | 0.473092 | 3.2:+70549102 | MS.gene25800:CDS |
ACAAGACTGCCTGCAGTAGT+TGG | 0.478198 | 3.2:+70545989 | MS.gene25800:CDS |
GAGTCGTGGCATTGGTTGGC+AGG | 0.487574 | 3.2:+70547615 | MS.gene25800:CDS |
GTACCATGTTTGCAGTCAAC+TGG | 0.493026 | 3.2:+70547535 | MS.gene25800:intron |
AGGTCTTGAAGTTGTTCCAT+AGG | 0.494492 | 3.2:-70543545 | None:intergenic |
TCATTAATAATATAAGCAAC+TGG | 0.496140 | 3.2:-70546034 | None:intergenic |
GTTCCCATACCCTCTACAAT+GGG | 0.497195 | 3.2:+70547379 | MS.gene25800:CDS |
CCTTGTTTACCAGGTGCAGT+TGG | 0.497805 | 3.2:+70548951 | MS.gene25800:intron |
TAGAGTCTATGCAGTATTCA+AGG | 0.497867 | 3.2:-70543565 | None:intergenic |
GCTTGATGGTCTTTATGGAA+CGG | 0.500532 | 3.2:+70547904 | MS.gene25800:CDS |
CTCCTTGGTCTGACTCGAGT+TGG | 0.501864 | 3.2:+70548066 | MS.gene25800:CDS |
AATACAAAGCAGCAAATATC+GGG | 0.502068 | 3.2:-70548323 | None:intergenic |
GCTCGGTTACAGCCAAGTCT+GGG | 0.511928 | 3.2:+70546655 | MS.gene25800:CDS |
CTTGTTCAATCAGGGTGACA+AGG | 0.514640 | 3.2:+70545901 | MS.gene25800:intron |
AGAGTTGTTCAGATTTCTGC+CGG | 0.516195 | 3.2:+70548096 | MS.gene25800:CDS |
CATACAATGCGAGCTATACA+AGG | 0.524147 | 3.2:+70546599 | MS.gene25800:CDS |
CGGGGCAGTAGATATTAGAT+TGG | 0.526481 | 3.2:-70547267 | None:intergenic |
TCAATCAGGGTGACAAGGCA+AGG | 0.526818 | 3.2:+70545906 | MS.gene25800:intron |
TCTGTCATCTTGACTGCTAG+TGG | 0.532372 | 3.2:+70547191 | MS.gene25800:CDS |
TGTTCACACCAACGCCGGAT+GGG | 0.540061 | 3.2:+70549103 | MS.gene25800:CDS |
CCACGACTCAACACATAAGC+AGG | 0.540372 | 3.2:-70547601 | None:intergenic |
TATGTGTTGAGTCGTGGCAT+TGG | 0.541938 | 3.2:+70547607 | MS.gene25800:CDS |
AAGAGTGACTTACACAGAAA+CGG | 0.542109 | 3.2:-70547939 | None:intergenic |
GACAAGAACTGCAGACATCA+TGG | 0.542492 | 3.2:-70547435 | None:intergenic |
TTAATATTCCAGGGAAAATG+TGG | 0.543286 | 3.2:+70548041 | MS.gene25800:intron |
TGGAATACCGATGCTGTTGT+TGG | 0.543522 | 3.2:+70546976 | MS.gene25800:CDS |
TCTCTAGATCATCATGTAGG+TGG | 0.543748 | 3.2:-70549460 | None:intergenic |
CTTTCTCTAGATCATCATGT+AGG | 0.546950 | 3.2:-70549463 | None:intergenic |
TGCAGTTCTTGTCTCAATGG+TGG | 0.554394 | 3.2:+70547445 | MS.gene25800:CDS |
CTCTAGATCATCATGTAGGT+GGG | 0.555606 | 3.2:-70549459 | None:intergenic |
AGACTGCCTGCAGTAGTTGG+AGG | 0.556312 | 3.2:+70545992 | MS.gene25800:CDS |
CATAGACTCTAATCCACCAT+GGG | 0.559042 | 3.2:+70543577 | MS.gene25800:CDS |
CAATTATGCTGCGTTTGAGA+AGG | 0.559208 | 3.2:-70547230 | None:intergenic |
TGTTGAGTCGTGGCATTGGT+TGG | 0.565395 | 3.2:+70547611 | MS.gene25800:CDS |
GTAGGGAAAACACACCCATC+CGG | 0.565609 | 3.2:-70549117 | None:intergenic |
CAACCTCAAGAGTGTTGTCG+AGG | 0.568887 | 3.2:-70549324 | None:intergenic |
AGTTCTTGTCTCAATGGTGG+AGG | 0.569072 | 3.2:+70547448 | MS.gene25800:CDS |
AATCCAACCAATCCAACTAC+AGG | 0.569506 | 3.2:-70546803 | None:intergenic |
TCTTGAAGTTGTTCCATAGG+TGG | 0.574335 | 3.2:-70543542 | None:intergenic |
TGTTCCCATACCCTCTACAA+TGG | 0.575504 | 3.2:+70547378 | MS.gene25800:CDS |
CTCAACACATAAGCAGGAGG+TGG | 0.578742 | 3.2:-70547595 | None:intergenic |
ATAGCTGGAACGAGAAATGA+AGG | 0.579906 | 3.2:-70545726 | None:intergenic |
CAAAGCAGCAAATATCGGGA+AGG | 0.582064 | 3.2:-70548319 | None:intergenic |
CACATAAGCAGGAGGTGGAG+TGG | 0.582532 | 3.2:-70547590 | None:intergenic |
AAAACACACCCATCCGGCGT+TGG | 0.582873 | 3.2:-70549111 | None:intergenic |
CTACCGTGGGAAATCCTCGT+TGG | 0.583638 | 3.2:-70546835 | None:intergenic |
ATCATTAATTCGTTGCAATG+AGG | 0.584512 | 3.2:-70546059 | None:intergenic |
GACCCCATTGTAGAGGGTAT+GGG | 0.587076 | 3.2:-70547382 | None:intergenic |
TTCTGGACTAGTTCACATCA+TGG | 0.587628 | 3.2:+70549077 | MS.gene25800:CDS |
AATGAACCTCCAACTACTGC+AGG | 0.587641 | 3.2:-70545998 | None:intergenic |
AGACATTACTCATCCACCTA+TGG | 0.590771 | 3.2:+70543529 | MS.gene25800:CDS |
ATCCGGCGTTGGTGTGAACA+GGG | 0.591925 | 3.2:-70549100 | None:intergenic |
TCAAGTATTCAGATAGTGCT+CGG | 0.594430 | 3.2:+70546638 | MS.gene25800:CDS |
GTGGGTGGACCCCATTGTAG+AGG | 0.595584 | 3.2:-70547389 | None:intergenic |
ATTGGGGAACAGATATTCCA+AGG | 0.599942 | 3.2:-70549043 | None:intergenic |
CAGTAGATATTAGATTGGCT+CGG | 0.603135 | 3.2:-70547262 | None:intergenic |
CAATCAGGGTGACAAGGCAA+GGG | 0.605310 | 3.2:+70545907 | MS.gene25800:intron |
GGCCCTGTTCACACCAACGC+CGG | 0.606687 | 3.2:+70549098 | MS.gene25800:CDS |
TGAGAAATCTTATCATCACT+GGG | 0.608053 | 3.2:+70549009 | MS.gene25800:CDS |
ATATAAGGCAGCATCTCGGT+TGG | 0.615741 | 3.2:+70547561 | MS.gene25800:CDS |
AAAGCAGCAAATATCGGGAA+GGG | 0.616582 | 3.2:-70548318 | None:intergenic |
TGGGTGGACCCCATTGTAGA+GGG | 0.618510 | 3.2:-70547388 | None:intergenic |
GATCCTCGACAACACTCTTG+AGG | 0.621370 | 3.2:+70549321 | MS.gene25800:CDS |
AGCAGGAAACTTACTTCGTG+AGG | 0.623408 | 3.2:-70546082 | None:intergenic |
AAGATCGAGGAATGCCGTGG+TGG | 0.624077 | 3.2:+70549359 | MS.gene25800:CDS |
CCTGCTTATGTGTTGAGTCG+TGG | 0.624250 | 3.2:+70547601 | MS.gene25800:CDS |
TTGATGGTCTTTATGGAACG+GGG | 0.627141 | 3.2:+70547906 | MS.gene25800:CDS |
GAAAAGTCAAAGAAAGATCG+AGG | 0.629752 | 3.2:+70549346 | MS.gene25800:CDS |
AGATCGAGGAATGCCGTGGT+GGG | 0.632867 | 3.2:+70549360 | MS.gene25800:CDS |
TTGTAACACAAATCAAAACC+GGG | 0.635117 | 3.2:-70547154 | None:intergenic |
GCATAGACTCTAATCCACCA+TGG | 0.635932 | 3.2:+70543576 | MS.gene25800:CDS |
TTTCTCGTTCCAGCTATGGG+AGG | 0.636239 | 3.2:+70545732 | MS.gene25800:CDS |
GAGCACTATCTGAATACTTG+AGG | 0.638800 | 3.2:-70546636 | None:intergenic |
CCAATGACCAACAACAGCAT+CGG | 0.645264 | 3.2:-70546983 | None:intergenic |
GTGCATATAAGGCAGCATCT+CGG | 0.646896 | 3.2:+70547557 | MS.gene25800:CDS |
TTCCAACTCGAGTCAGACCA+AGG | 0.650900 | 3.2:-70548068 | None:intergenic |
TAATATTCCAGGGAAAATGT+GGG | 0.651365 | 3.2:+70548042 | MS.gene25800:intron |
CTCGGTTACAGCCAAGTCTG+GGG | 0.660635 | 3.2:+70546656 | MS.gene25800:CDS |
GTTCTAAACTTTACCCACCA+CGG | 0.662567 | 3.2:-70549373 | None:intergenic |
TTCTCATCACCAGCAACAGT+AGG | 0.664170 | 3.2:+70549283 | MS.gene25800:CDS |
GCGTTTGAGAAGGTCTGTGT+CGG | 0.671196 | 3.2:-70547220 | None:intergenic |
ACTACAGGTGCCATGCCAAG+AGG | 0.676234 | 3.2:-70546788 | None:intergenic |
AGAAAGATCGAGGAATGCCG+TGG | 0.682454 | 3.2:+70549356 | MS.gene25800:CDS |
CGACTCAACACATAAGCAGG+AGG | 0.693627 | 3.2:-70547598 | None:intergenic |
ACTACGAACACATACCAACA+AGG | 0.708645 | 3.2:-70548359 | None:intergenic |
TGAGAGAGAGTACCCCATGG+TGG | 0.715990 | 3.2:-70543590 | None:intergenic |
AATCCAACGAGGATTTCCCA+CGG | 0.718309 | 3.2:+70546832 | MS.gene25800:CDS |
TTCCCATACCCTCTACAATG+GGG | 0.726149 | 3.2:+70547380 | MS.gene25800:CDS |
GGATTAGGATTAATCCAACG+AGG | 0.727664 | 3.2:+70546821 | MS.gene25800:CDS |
ATCTAATATCTACTGCCCCG+TGG | 0.731953 | 3.2:+70547270 | MS.gene25800:CDS |
CAGAAATCTGAACAACTCTG+CGG | 0.767032 | 3.2:-70548092 | None:intergenic |
ATAGACTCTAATCCACCATG+GGG | 0.811093 | 3.2:+70543578 | MS.gene25800:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGAATATTAAATTTAAACAT+TGG | + | chr3.2:70546133-70546152 | MS.gene25800:intron | 10.0% |
!!! | AAAAAACATGTTTTTTTAAA+AGG | + | chr3.2:70544084-70544103 | MS.gene25800:intron | 10.0% |
!!! | AACTTATTAAGTTTTTTATT+TGG | + | chr3.2:70546526-70546545 | MS.gene25800:intron | 10.0% |
!!! | AATATTTTACAACAATTTTA+AGG | + | chr3.2:70548822-70548841 | MS.gene25800:intron | 10.0% |
!!! | TAATATTTTACTATTTTTCT+GGG | + | chr3.2:70544563-70544582 | MS.gene25800:intron | 10.0% |
!!! | TATCTTATTAATTTTTCATA+GGG | + | chr3.2:70547869-70547888 | MS.gene25800:intron | 10.0% |
!!! | TTAATATTTTACTATTTTTC+TGG | + | chr3.2:70544562-70544581 | MS.gene25800:intron | 10.0% |
!!! | TTATCTTATTAATTTTTCAT+AGG | + | chr3.2:70547868-70547887 | MS.gene25800:intron | 10.0% |
!! | AAAATAATATCACGTATTAT+TGG | - | chr3.2:70549149-70549168 | None:intergenic | 15.0% |
!! | ATCTCTTAAAAAAGATTAAA+GGG | + | chr3.2:70543741-70543760 | MS.gene25800:intron | 15.0% |
!! | GATAATGTAAAGAAAAAATA+TGG | - | chr3.2:70545604-70545623 | None:intergenic | 15.0% |
!! | GTTTAATTACGATAAATAAA+GGG | - | chr3.2:70544483-70544502 | None:intergenic | 15.0% |
!! | TATCTCTTAAAAAAGATTAA+AGG | + | chr3.2:70543740-70543759 | MS.gene25800:intron | 15.0% |
!! | TGTTTAATTACGATAAATAA+AGG | - | chr3.2:70544484-70544503 | None:intergenic | 15.0% |
!!! | AATATTTTACTATTTTTCTG+GGG | + | chr3.2:70544564-70544583 | MS.gene25800:intron | 15.0% |
!!! | ACATTTTCTAATTTATTATG+TGG | + | chr3.2:70544280-70544299 | MS.gene25800:intron | 15.0% |
!!! | ACTTAATAAGTTTATTTCTA+AGG | - | chr3.2:70546518-70546537 | None:intergenic | 15.0% |
!!! | ATCTTATTAATTTTTCATAG+GGG | + | chr3.2:70547870-70547889 | MS.gene25800:intron | 15.0% |
!!! | ATTAAGTTTTTTATTTGGTA+GGG | + | chr3.2:70546531-70546550 | MS.gene25800:intron | 15.0% |
!!! | TATTAAGTTTTTTATTTGGT+AGG | + | chr3.2:70546530-70546549 | MS.gene25800:intron | 15.0% |
!!! | TATTCTATCATATTTTACAA+TGG | - | chr3.2:70546213-70546232 | None:intergenic | 15.0% |
!!! | TTTTTTTAAAAGGAAAACTT+TGG | + | chr3.2:70544094-70544113 | MS.gene25800:intron | 15.0% |
!! | AAAAAAACATAATGTGATGA+TGG | - | chr3.2:70544175-70544194 | None:intergenic | 20.0% |
!! | ACATCAATAATAATTCTGAA+TGG | + | chr3.2:70546260-70546279 | MS.gene25800:intron | 20.0% |
!! | AGAATGAAATATAGAACATT+TGG | + | chr3.2:70545536-70545555 | MS.gene25800:intron | 20.0% |
!! | AGATAACTATCATTAGTATT+AGG | - | chr3.2:70547854-70547873 | None:intergenic | 20.0% |
!! | ATAGTTCTCACTTTAATATA+TGG | + | chr3.2:70548878-70548897 | MS.gene25800:intron | 20.0% |
!! | ATATATTAAAGTGAGAACTA+TGG | - | chr3.2:70548879-70548898 | None:intergenic | 20.0% |
!! | ATATATTGTTGAGATAATGT+GGG | + | chr3.2:70543997-70544016 | MS.gene25800:intron | 20.0% |
!! | ATCTGTAACAAAAAAGTTAA+AGG | - | chr3.2:70545137-70545156 | None:intergenic | 20.0% |
!! | CAAGAAAATAATACATGTAA+GGG | - | chr3.2:70545453-70545472 | None:intergenic | 20.0% |
!! | CATCAATAATAATTCTGAAT+GGG | + | chr3.2:70546261-70546280 | MS.gene25800:intron | 20.0% |
!! | CATTTCTATTTGTCTTTATA+TGG | + | chr3.2:70544221-70544240 | MS.gene25800:intron | 20.0% |
!! | GAAACCATGATTAAATATTA+TGG | + | chr3.2:70546233-70546252 | MS.gene25800:intron | 20.0% |
!! | GACATGTTAAAAACTTAAAA+TGG | - | chr3.2:70544253-70544272 | None:intergenic | 20.0% |
!! | GTAAAGAAAAAATATGGATA+TGG | - | chr3.2:70545598-70545617 | None:intergenic | 20.0% |
!! | TAAAACAAGTTTCAAGATTT+GGG | - | chr3.2:70546452-70546471 | None:intergenic | 20.0% |
!! | TCAAGAAAATAATACATGTA+AGG | - | chr3.2:70545454-70545473 | None:intergenic | 20.0% |
!! | TCATTAATAATATAAGCAAC+TGG | - | chr3.2:70546037-70546056 | None:intergenic | 20.0% |
!! | TTAAAACAAGTTTCAAGATT+TGG | - | chr3.2:70546453-70546472 | None:intergenic | 20.0% |
!! | TTGTCCATAATATTTAATCA+TGG | - | chr3.2:70546240-70546259 | None:intergenic | 20.0% |
!! | TTTAATGTCAAAATAGTTCA+GGG | + | chr3.2:70546468-70546487 | MS.gene25800:intron | 20.0% |
!!! | ATTGTTTTTCATTTCAGTTA+GGG | + | chr3.2:70546939-70546958 | MS.gene25800:intron | 20.0% |
!!! | ATTTTACCATTACATTCAAA+TGG | + | chr3.2:70543811-70543830 | MS.gene25800:intron | 20.0% |
!!! | ATTTTTATTAAATGCTCCAT+AGG | + | chr3.2:70544787-70544806 | MS.gene25800:intron | 20.0% |
!!! | TATTGTTTTTCATTTCAGTT+AGG | + | chr3.2:70546938-70546957 | MS.gene25800:intron | 20.0% |
!!! | TATTTGTTTTGGCATTTTTA+GGG | + | chr3.2:70546181-70546200 | MS.gene25800:intron | 20.0% |
!!! | TGATTTGTGTTACAATTATT+TGG | + | chr3.2:70547162-70547181 | MS.gene25800:CDS | 20.0% |
!!! | TGTAATTTTGAAATGCTAAT+AGG | - | chr3.2:70545677-70545696 | None:intergenic | 20.0% |
!!! | TTATAATATGGATCTAAAGT+TGG | - | chr3.2:70546358-70546377 | None:intergenic | 20.0% |
!!! | TTATTTGTTTTGGCATTTTT+AGG | + | chr3.2:70546180-70546199 | MS.gene25800:intron | 20.0% |
!!! | TTGATATTGCGAAAATTTTA+CGG | + | chr3.2:70545470-70545489 | MS.gene25800:intron | 20.0% |
!!! | TTTTAATGTCAAAATAGTTC+AGG | + | chr3.2:70546467-70546486 | MS.gene25800:intron | 20.0% |
!!! | TTTTACCATTACATTCAAAT+GGG | + | chr3.2:70543812-70543831 | MS.gene25800:intron | 20.0% |
! | ACAATTAAAATCATCGCTAA+AGG | - | chr3.2:70545867-70545886 | None:intergenic | 25.0% |
! | ACCATATTCAAATGATATGA+AGG | + | chr3.2:70548715-70548734 | MS.gene25800:intron | 25.0% |
! | AGCAAAGAATATCATAAAAC+CGG | - | chr3.2:70548118-70548137 | None:intergenic | 25.0% |
! | AGTCTTTCATATTTCGAAAA+TGG | + | chr3.2:70548519-70548538 | MS.gene25800:intron | 25.0% |
! | AGTTACCAATTATATTAGAG+AGG | - | chr3.2:70548581-70548600 | None:intergenic | 25.0% |
! | ATTGTAACACAAATCAAAAC+CGG | - | chr3.2:70547158-70547177 | None:intergenic | 25.0% |
! | CAAACTATTCAATTACTAAC+AGG | + | chr3.2:70547657-70547676 | MS.gene25800:intron | 25.0% |
! | CAGAATTCATTGAAAAATTG+GGG | - | chr3.2:70549062-70549081 | None:intergenic | 25.0% |
! | CAGTACAAGAAATTAAGTAA+AGG | + | chr3.2:70544842-70544861 | MS.gene25800:intron | 25.0% |
! | CATATATTGTTGAGATAATG+TGG | + | chr3.2:70543996-70544015 | MS.gene25800:intron | 25.0% |
! | CATTAATTTAGACAGTGTTA+AGG | + | chr3.2:70547702-70547721 | MS.gene25800:intron | 25.0% |
! | CCAGAATTCATTGAAAAATT+GGG | - | chr3.2:70549063-70549082 | None:intergenic | 25.0% |
! | GTTACCAATTATATTAGAGA+GGG | - | chr3.2:70548580-70548599 | None:intergenic | 25.0% |
! | GTTATTAAGACAAACCAATT+TGG | + | chr3.2:70547069-70547088 | MS.gene25800:intron | 25.0% |
! | TCACTATAATAAGAGAATCT+GGG | + | chr3.2:70544991-70545010 | MS.gene25800:intron | 25.0% |
! | TCCAGAATTCATTGAAAAAT+TGG | - | chr3.2:70549064-70549083 | None:intergenic | 25.0% |
! | TCCTTCATATCATTTGAATA+TGG | - | chr3.2:70548719-70548738 | None:intergenic | 25.0% |
! | TGGAAATATCATTTACTAGA+TGG | - | chr3.2:70546891-70546910 | None:intergenic | 25.0% |
! | TTCACTATAATAAGAGAATC+TGG | + | chr3.2:70544990-70545009 | MS.gene25800:intron | 25.0% |
! | TTGAAGAAAGATCTTTGATT+TGG | - | chr3.2:70548461-70548480 | None:intergenic | 25.0% |
! | TTGTATAAAACTGTTACTGT+TGG | - | chr3.2:70544914-70544933 | None:intergenic | 25.0% |
! | TTTAAAAGAGTAGAATCCAA+TGG | + | chr3.2:70546399-70546418 | MS.gene25800:intron | 25.0% |
! | TTTACATATCATGCTGATAA+AGG | - | chr3.2:70545813-70545832 | None:intergenic | 25.0% |
!! | AACATTGGTTATTCAAATTC+TGG | + | chr3.2:70546148-70546167 | MS.gene25800:intron | 25.0% |
!! | AAGTAAAGGTACAATTGTTA+TGG | + | chr3.2:70544856-70544875 | MS.gene25800:intron | 25.0% |
!! | AGTTTATGTTTTCCTTGATA+CGG | + | chr3.2:70548603-70548622 | MS.gene25800:intron | 25.0% |
!! | ATTAATTTTTCATAGGGGAT+TGG | + | chr3.2:70547875-70547894 | MS.gene25800:intron | 25.0% |
!! | ATTTTCTTCCTTTATAATGC+GGG | + | chr3.2:70545165-70545184 | MS.gene25800:intron | 25.0% |
!! | CATTTTCTTCCTTTATAATG+CGG | + | chr3.2:70545164-70545183 | MS.gene25800:intron | 25.0% |
!! | CTATTTTCTTAAATCACTCT+CGG | + | chr3.2:70545355-70545374 | MS.gene25800:intron | 25.0% |
!! | GATGTGTGATTTATTTGTTT+TGG | + | chr3.2:70546170-70546189 | MS.gene25800:intron | 25.0% |
!! | GTAAAGTTTAGAACATTTAG+AGG | + | chr3.2:70549382-70549401 | MS.gene25800:CDS | 25.0% |
!! | TCTATCATATTTTACAATGG+TGG | - | chr3.2:70546210-70546229 | None:intergenic | 25.0% |
!! | TTCAAATGAACTTGTTTAGT+TGG | + | chr3.2:70544615-70544634 | MS.gene25800:intron | 25.0% |
!! | TTTGATTTCTTGTTCAATCA+GGG | + | chr3.2:70545893-70545912 | MS.gene25800:intron | 25.0% |
!!! | ATGATATTCTTTGCTACTTT+AGG | + | chr3.2:70548123-70548142 | MS.gene25800:CDS | 25.0% |
!!! | CAAAATTACATTTTGATGCT+TGG | + | chr3.2:70545687-70545706 | MS.gene25800:CDS | 25.0% |
AAGAACCTGTTTAGATTGAA+TGG | - | chr3.2:70549439-70549458 | None:intergenic | 30.0% | |
AAGACAGATTCACTTATTTG+AGG | + | chr3.2:70548233-70548252 | MS.gene25800:intron | 30.0% | |
AAGATAGGTATGTCTCTAAA+TGG | - | chr3.2:70547125-70547144 | None:intergenic | 30.0% | |
AAGCTGAAATTCAAACTTAC+AGG | - | chr3.2:70545762-70545781 | None:intergenic | 30.0% | |
AATACAAAGCAGCAAATATC+GGG | - | chr3.2:70548326-70548345 | None:intergenic | 30.0% | |
AATTCTGAATGGGAAATAGA+AGG | + | chr3.2:70546271-70546290 | MS.gene25800:intron | 30.0% | |
ACCCACCATTTAATAATGTT+GGG | + | chr3.2:70544886-70544905 | MS.gene25800:intron | 30.0% | |
ACTTAATGTAATCAGCTCTA+GGG | + | chr3.2:70547023-70547042 | MS.gene25800:intron | 30.0% | |
ACTTCCCTCTCTAATATAAT+TGG | + | chr3.2:70548573-70548592 | MS.gene25800:intron | 30.0% | |
AGATGGAAAAAATTAGCATC+AGG | - | chr3.2:70549233-70549252 | None:intergenic | 30.0% | |
ATATCCATACACATGCATAA+AGG | + | chr3.2:70543643-70543662 | MS.gene25800:intron | 30.0% | |
ATCATTAATTCGTTGCAATG+AGG | - | chr3.2:70546062-70546081 | None:intergenic | 30.0% | |
ATGAGAAATCTTATCATCAC+TGG | + | chr3.2:70549008-70549027 | MS.gene25800:CDS | 30.0% | |
CAATACAAAGCAGCAAATAT+CGG | - | chr3.2:70548327-70548346 | None:intergenic | 30.0% | |
CCAAATCACAAATTTATGTG+AGG | - | chr3.2:70548788-70548807 | None:intergenic | 30.0% | |
CCTCACATAAATTTGTGATT+TGG | + | chr3.2:70548785-70548804 | MS.gene25800:intron | 30.0% | |
GCTTTGTATTGTGTTCTATT+TGG | + | chr3.2:70548336-70548355 | MS.gene25800:CDS | 30.0% | |
GTACACAGTTTATCGATAAT+AGG | - | chr3.2:70546315-70546334 | None:intergenic | 30.0% | |
GTATTAGGAAAAAGTAAAGC+AGG | - | chr3.2:70547839-70547858 | None:intergenic | 30.0% | |
GTGAAACTGAAGATAATTGT+TGG | + | chr3.2:70544703-70544722 | MS.gene25800:intron | 30.0% | |
TAATATCCACCATATTGATC+AGG | - | chr3.2:70548197-70548216 | None:intergenic | 30.0% | |
TAATATTCCAGGGAAAATGT+GGG | + | chr3.2:70548042-70548061 | MS.gene25800:intron | 30.0% | |
TACTGCAATTTACACCAAAT+TGG | - | chr3.2:70547086-70547105 | None:intergenic | 30.0% | |
TGAACATAACTACTATGTGT+CGG | - | chr3.2:70545328-70545347 | None:intergenic | 30.0% | |
TGAAGATAATTGTTGGAACT+AGG | + | chr3.2:70544710-70544729 | MS.gene25800:intron | 30.0% | |
TGAGAAATCTTATCATCACT+GGG | + | chr3.2:70549009-70549028 | MS.gene25800:CDS | 30.0% | |
TTAATATTCCAGGGAAAATG+TGG | + | chr3.2:70548041-70548060 | MS.gene25800:intron | 30.0% | |
TTCAACCCATTTGAATGTAA+TGG | - | chr3.2:70543820-70543839 | None:intergenic | 30.0% | |
TTGTAACACAAATCAAAACC+GGG | - | chr3.2:70547157-70547176 | None:intergenic | 30.0% | |
! | AGGTTTCTTTTGATGCTTAT+AGG | + | chr3.2:70547351-70547370 | MS.gene25800:intron | 30.0% |
! | ATTTTTCTTCTGTTATCTGC+AGG | + | chr3.2:70548267-70548286 | MS.gene25800:intron | 30.0% |
! | GTTTGATTTCTTGTTCAATC+AGG | + | chr3.2:70545892-70545911 | MS.gene25800:intron | 30.0% |
! | TTTTCTTCCTTTATAATGCG+GGG | + | chr3.2:70545166-70545185 | MS.gene25800:intron | 30.0% |
!! | AATAGTCACTGTTATTTCTC+AGG | + | chr3.2:70547331-70547350 | MS.gene25800:intron | 30.0% |
!! | CAGTTTTTGAGCATATATTG+AGG | - | chr3.2:70548494-70548513 | None:intergenic | 30.0% |
!! | CCCAATTTTTCAATGAATTC+TGG | + | chr3.2:70549060-70549079 | MS.gene25800:CDS | 30.0% |
!! | GAAACGAAATCGTTATTTTG+AGG | - | chr3.2:70547298-70547317 | None:intergenic | 30.0% |
!! | GTCATTTTGCATAAAACCAT+TGG | - | chr3.2:70546418-70546437 | None:intergenic | 30.0% |
!! | GTGAAACTAGTTTGTTACTT+TGG | + | chr3.2:70543938-70543957 | MS.gene25800:intron | 30.0% |
!!! | GAAGGATTTTAGTTGAAGAA+AGG | + | chr3.2:70546289-70546308 | MS.gene25800:intron | 30.0% |
AAAAAGAGAAATGACCTGCA+TGG | + | chr3.2:70547789-70547808 | MS.gene25800:intron | 35.0% | |
AACAATCCTGATCAATATGG+TGG | + | chr3.2:70548188-70548207 | MS.gene25800:intron | 35.0% | |
AAGAGTGACTTACACAGAAA+CGG | - | chr3.2:70547942-70547961 | None:intergenic | 35.0% | |
AATAAAAGAGAGCAGAGAAG+AGG | - | chr3.2:70544970-70544989 | None:intergenic | 35.0% | |
AATGCATTGAACTGCAAAGA+TGG | - | chr3.2:70549250-70549269 | None:intergenic | 35.0% | |
AATGCCAGCTACAAAAAGAA+GGG | - | chr3.2:70545942-70545961 | None:intergenic | 35.0% | |
AATTTGTGTCTTTCTCTCTG+AGG | + | chr3.2:70544937-70544956 | MS.gene25800:intron | 35.0% | |
ACCCCAACATTATTAAATGG+TGG | - | chr3.2:70544891-70544910 | None:intergenic | 35.0% | |
ACGTATTATTGGACAGTTGT+AGG | - | chr3.2:70549138-70549157 | None:intergenic | 35.0% | |
ACTTCGTAGGTTATGACTTT+GGG | + | chr3.2:70545422-70545441 | MS.gene25800:intron | 35.0% | |
AGAAACTAGTAGGAACTGAA+GGG | + | chr3.2:70544733-70544752 | MS.gene25800:intron | 35.0% | |
AGAATGACCAACAGAAAAAG+TGG | - | chr3.2:70547411-70547430 | None:intergenic | 35.0% | |
AGAGAAGCCAAAAAATGTGA+AGG | - | chr3.2:70545073-70545092 | None:intergenic | 35.0% | |
AGCAACAATCCTGATCAATA+TGG | + | chr3.2:70548185-70548204 | MS.gene25800:intron | 35.0% | |
AGTGGAACAAGAACAATGTA+CGG | - | chr3.2:70548400-70548419 | None:intergenic | 35.0% | |
ATAAAAGAGAGCAGAGAAGA+GGG | - | chr3.2:70544969-70544988 | None:intergenic | 35.0% | |
ATGTGTGATTACAAGTTGCT+TGG | + | chr3.2:70547967-70547986 | MS.gene25800:intron | 35.0% | |
ATTGAGATGTTCCAATTGTC+TGG | + | chr3.2:70545190-70545209 | MS.gene25800:intron | 35.0% | |
CATATCATGCTGATAAAGGT+TGG | - | chr3.2:70545809-70545828 | None:intergenic | 35.0% | |
CCCACCATTTAATAATGTTG+GGG | + | chr3.2:70544887-70544906 | MS.gene25800:intron | 35.0% | |
CCCCAACATTATTAAATGGT+GGG | - | chr3.2:70544890-70544909 | None:intergenic | 35.0% | |
CGGTTGTTACACTAAATTCT+AGG | + | chr3.2:70545045-70545064 | MS.gene25800:intron | 35.0% | |
CGTATTATTGGACAGTTGTA+GGG | - | chr3.2:70549137-70549156 | None:intergenic | 35.0% | |
CTTCAAATTGAAGTCGTGTT+TGG | + | chr3.2:70545276-70545295 | MS.gene25800:intron | 35.0% | |
CTTTGCCATTCAATCTAAAC+AGG | + | chr3.2:70549431-70549450 | MS.gene25800:CDS | 35.0% | |
GAAAAGTCAAAGAAAGATCG+AGG | + | chr3.2:70549346-70549365 | MS.gene25800:CDS | 35.0% | |
GAAAGATATTTGTGCACATG+CGG | - | chr3.2:70548857-70548876 | None:intergenic | 35.0% | |
GAATGACCAACAGAAAAAGT+GGG | - | chr3.2:70547410-70547429 | None:intergenic | 35.0% | |
GACCCACCATTTAATAATGT+TGG | + | chr3.2:70544885-70544904 | MS.gene25800:intron | 35.0% | |
GACTTAATGTAATCAGCTCT+AGG | + | chr3.2:70547022-70547041 | MS.gene25800:intron | 35.0% | |
GGTGTAAATTGCAGTATCTA+AGG | + | chr3.2:70547090-70547109 | MS.gene25800:intron | 35.0% | |
GTAACAACCGTTAGAAACAA+GGG | - | chr3.2:70545035-70545054 | None:intergenic | 35.0% | |
GTTAACCATATCAAGAACTG+TGG | + | chr3.2:70548625-70548644 | MS.gene25800:intron | 35.0% | |
TAAAAAGACGTTACTGCCTA+TGG | - | chr3.2:70544806-70544825 | None:intergenic | 35.0% | |
TAATGCCACAGTTCTTGATA+TGG | - | chr3.2:70548633-70548652 | None:intergenic | 35.0% | |
TAATGCCAGCTACAAAAAGA+AGG | - | chr3.2:70545943-70545962 | None:intergenic | 35.0% | |
TACTTCGTAGGTTATGACTT+TGG | + | chr3.2:70545421-70545440 | MS.gene25800:intron | 35.0% | |
TAGAGTCTATGCAGTATTCA+AGG | - | chr3.2:70543568-70543587 | None:intergenic | 35.0% | |
TAGTCCTTTATGCATGTGTA+TGG | - | chr3.2:70543650-70543669 | None:intergenic | 35.0% | |
TCAAGTATTCAGATAGTGCT+CGG | + | chr3.2:70546638-70546657 | MS.gene25800:CDS | 35.0% | |
TCACTCTTAAGCAAAACTTC+AGG | - | chr3.2:70543922-70543941 | None:intergenic | 35.0% | |
TGAAAGACATTCATTGCTAG+AGG | - | chr3.2:70544599-70544618 | None:intergenic | 35.0% | |
TGATATGGTTAACCGTATCA+AGG | - | chr3.2:70548618-70548637 | None:intergenic | 35.0% | |
TGATATTTCCACATCACAGT+TGG | + | chr3.2:70546900-70546919 | MS.gene25800:intron | 35.0% | |
TGGACCCCAACATTATTAAA+TGG | - | chr3.2:70544894-70544913 | None:intergenic | 35.0% | |
TGTAACAACCGTTAGAAACA+AGG | - | chr3.2:70545036-70545055 | None:intergenic | 35.0% | |
TTACAACAATCAGTGCATAG+TGG | - | chr3.2:70548418-70548437 | None:intergenic | 35.0% | |
TTAGGGAACTGTGTAGAAAT+TGG | + | chr3.2:70546956-70546975 | MS.gene25800:CDS | 35.0% | |
! | ACTATGTTTCCTTGTTTACC+AGG | + | chr3.2:70548942-70548961 | MS.gene25800:intron | 35.0% |
! | AGTTCAGGGATTTTCACATA+TGG | + | chr3.2:70546482-70546501 | MS.gene25800:intron | 35.0% |
! | ATCTTGCTTGATGGTCTTTA+TGG | + | chr3.2:70547899-70547918 | MS.gene25800:CDS | 35.0% |
! | CAAAAGATTAGCCAGACAAT+TGG | - | chr3.2:70545204-70545223 | None:intergenic | 35.0% |
! | CAGTAGATATTAGATTGGCT+CGG | - | chr3.2:70547265-70547284 | None:intergenic | 35.0% |
! | CTTGTTGATGAACTCTTTCA+TGG | - | chr3.2:70548659-70548678 | None:intergenic | 35.0% |
! | GAACTTTCAGTCTCCATTTT+CGG | - | chr3.2:70543966-70543985 | None:intergenic | 35.0% |
! | TGTGGTTGGTTAATATTCCA+GGG | + | chr3.2:70548032-70548051 | MS.gene25800:intron | 35.0% |
!! | ATTAGAAGCACTTGTTTGAC+AGG | + | chr3.2:70547762-70547781 | MS.gene25800:intron | 35.0% |
!! | TGTTACTTTGGTTCCGAAAA+TGG | + | chr3.2:70543950-70543969 | MS.gene25800:intron | 35.0% |
!! | TTGATTTGGATGAGTTGCTT+AGG | - | chr3.2:70548447-70548466 | None:intergenic | 35.0% |
!!! | ATCGTTATTTTGAGGTACCA+CGG | - | chr3.2:70547290-70547309 | None:intergenic | 35.0% |
!!! | TTGATCAGGATTGTTGCTTT+TGG | - | chr3.2:70548183-70548202 | None:intergenic | 35.0% |
AAAGAGTTCATCAACAAGCG+AGG | + | chr3.2:70548661-70548680 | MS.gene25800:intron | 40.0% | |
AAAGCAGCAAATATCGGGAA+GGG | - | chr3.2:70548321-70548340 | None:intergenic | 40.0% | |
AACAACGATGAGAATGAAGC+AGG | - | chr3.2:70546102-70546121 | None:intergenic | 40.0% | |
AAGAGATGTTGCCATGTGAT+TGG | + | chr3.2:70546560-70546579 | MS.gene25800:intron | 40.0% | |
AATCCAACCAATCCAACTAC+AGG | - | chr3.2:70546806-70546825 | None:intergenic | 40.0% | |
AATGATAATCCAACTGCACC+TGG | - | chr3.2:70548963-70548982 | None:intergenic | 40.0% | |
ACCTATCTTTGAACGTTTCC+CGG | + | chr3.2:70547136-70547155 | MS.gene25800:CDS | 40.0% | |
ACTACGAACACATACCAACA+AGG | - | chr3.2:70548362-70548381 | None:intergenic | 40.0% | |
AGACATTACTCATCCACCTA+TGG | + | chr3.2:70543529-70543548 | MS.gene25800:CDS | 40.0% | |
AGAGTTGTTCAGATTTCTGC+CGG | + | chr3.2:70548096-70548115 | MS.gene25800:CDS | 40.0% | |
AGGTCTTGAAGTTGTTCCAT+AGG | - | chr3.2:70543548-70543567 | None:intergenic | 40.0% | |
AGTAACTCAGTGTGTTGTGA+GGG | + | chr3.2:70544654-70544673 | MS.gene25800:intron | 40.0% | |
ATAGACTCTAATCCACCATG+GGG | + | chr3.2:70543578-70543597 | MS.gene25800:CDS | 40.0% | |
ATAGCTGGAACGAGAAATGA+AGG | - | chr3.2:70545729-70545748 | None:intergenic | 40.0% | |
ATAGTTTCAGCTGCAAGACA+AGG | - | chr3.2:70545654-70545673 | None:intergenic | 40.0% | |
ATCATTTCCTCACTTCACTG+TGG | + | chr3.2:70545625-70545644 | MS.gene25800:intron | 40.0% | |
ATCTCTGCAAACCAATCACA+TGG | - | chr3.2:70546574-70546593 | None:intergenic | 40.0% | |
ATTAGAGAGGGAAGTAGTCA+AGG | - | chr3.2:70548568-70548587 | None:intergenic | 40.0% | |
ATTGGGGAACAGATATTCCA+AGG | - | chr3.2:70549046-70549065 | None:intergenic | 40.0% | |
CAATTATGCTGCGTTTGAGA+AGG | - | chr3.2:70547233-70547252 | None:intergenic | 40.0% | |
CAGAAATCTGAACAACTCTG+CGG | - | chr3.2:70548095-70548114 | None:intergenic | 40.0% | |
CATACAATGCGAGCTATACA+AGG | + | chr3.2:70546599-70546618 | MS.gene25800:CDS | 40.0% | |
CATAGACTCTAATCCACCAT+GGG | + | chr3.2:70543577-70543596 | MS.gene25800:CDS | 40.0% | |
CGTCTCTTGTCTCTACTATA+AGG | + | chr3.2:70547488-70547507 | MS.gene25800:intron | 40.0% | |
CTCAATTCCCCGCATTATAA+AGG | - | chr3.2:70545176-70545195 | None:intergenic | 40.0% | |
CTCATCGTTGTTGTGCATTT+AGG | + | chr3.2:70546110-70546129 | MS.gene25800:intron | 40.0% | |
CTGTTATCTGCAGGAAAGTT+TGG | + | chr3.2:70548276-70548295 | MS.gene25800:intron | 40.0% | |
GAGAAACTAGTAGGAACTGA+AGG | + | chr3.2:70544732-70544751 | MS.gene25800:intron | 40.0% | |
GAGCACTATCTGAATACTTG+AGG | - | chr3.2:70546639-70546658 | None:intergenic | 40.0% | |
GGAATATTAACCAACCACAG+TGG | - | chr3.2:70548031-70548050 | None:intergenic | 40.0% | |
GGATTAGGATTAATCCAACG+AGG | + | chr3.2:70546821-70546840 | MS.gene25800:CDS | 40.0% | |
TCATTTCTCGTTCCAGCTAT+GGG | + | chr3.2:70545729-70545748 | MS.gene25800:CDS | 40.0% | |
TCTTGAAGTTGTTCCATAGG+TGG | - | chr3.2:70543545-70543564 | None:intergenic | 40.0% | |
TGCATAAACCAACTGTGATG+TGG | - | chr3.2:70546911-70546930 | None:intergenic | 40.0% | |
TGGAACTAGGAGAAACTAGT+AGG | + | chr3.2:70544723-70544742 | MS.gene25800:intron | 40.0% | |
TTCATTTCTCGTTCCAGCTA+TGG | + | chr3.2:70545728-70545747 | MS.gene25800:CDS | 40.0% | |
TTGACTGCAAACATGGTACA+TGG | - | chr3.2:70547534-70547553 | None:intergenic | 40.0% | |
! | ACACTTCTCCAAGCACTTTT+TGG | + | chr3.2:70545965-70545984 | MS.gene25800:CDS | 40.0% |
! | CAAACCCTTCTTTTTGTAGC+TGG | + | chr3.2:70545935-70545954 | MS.gene25800:CDS | 40.0% |
! | CTGTGGTTGGTTAATATTCC+AGG | + | chr3.2:70548031-70548050 | MS.gene25800:intron | 40.0% |
! | CTTGATGGTCTTTATGGAAC+GGG | + | chr3.2:70547905-70547924 | MS.gene25800:CDS | 40.0% |
! | GCTTGATGGTCTTTATGGAA+CGG | + | chr3.2:70547904-70547923 | MS.gene25800:CDS | 40.0% |
! | GTGTTAAGGTATCAGTCTTG+TGG | + | chr3.2:70547716-70547735 | MS.gene25800:intron | 40.0% |
! | GTTCTAAACTTTACCCACCA+CGG | - | chr3.2:70549376-70549395 | None:intergenic | 40.0% |
! | TGTTGCTGGTGATGAGAATA+TGG | - | chr3.2:70549281-70549300 | None:intergenic | 40.0% |
! | TTGATGGTCTTTATGGAACG+GGG | + | chr3.2:70547906-70547925 | MS.gene25800:CDS | 40.0% |
!! | AACCTACGAAGTACTGATAC+AGG | - | chr3.2:70545414-70545433 | None:intergenic | 40.0% |
!! | ATTTTTCAGTCCTCTTGGCA+TGG | + | chr3.2:70546778-70546797 | MS.gene25800:CDS | 40.0% |
!! | GTAGTTGGATTGGTTGGATT+AGG | + | chr3.2:70546806-70546825 | MS.gene25800:CDS | 40.0% |
!! | GTCTTGTTCCAAAAAGTGCT+TGG | - | chr3.2:70545976-70545995 | None:intergenic | 40.0% |
!! | TGCAGATTTTTCAGTCCTCT+TGG | + | chr3.2:70546773-70546792 | MS.gene25800:intron | 40.0% |
!! | TGTCCTACCCTTGTTTCTAA+CGG | + | chr3.2:70545025-70545044 | MS.gene25800:intron | 40.0% |
!! | TGTGTTCTATTTGGCCTTGT+TGG | + | chr3.2:70548345-70548364 | MS.gene25800:CDS | 40.0% |
!! | TTCTGGACTAGTTCACATCA+TGG | + | chr3.2:70549077-70549096 | MS.gene25800:CDS | 40.0% |
!!! | AGGATTGTTGCTTTTGGTGT+AGG | - | chr3.2:70548177-70548196 | None:intergenic | 40.0% |
!!! | CTAGGCACCTTCACATTTTT+TGG | + | chr3.2:70545063-70545082 | MS.gene25800:intron | 40.0% |
!!! | TCGTTATTTTGAGGTACCAC+GGG | - | chr3.2:70547289-70547308 | None:intergenic | 40.0% |
AAGAGAAATGACCTGCATGG+AGG | + | chr3.2:70547792-70547811 | MS.gene25800:intron | 45.0% | |
AAGGTAACCACAGTGAAGTG+AGG | - | chr3.2:70545635-70545654 | None:intergenic | 45.0% | |
AATCCAACGAGGATTTCCCA+CGG | + | chr3.2:70546832-70546851 | MS.gene25800:CDS | 45.0% | |
AATGAACCTCCAACTACTGC+AGG | - | chr3.2:70546001-70546020 | None:intergenic | 45.0% | |
ACCGGGAAACGTTCAAAGAT+AGG | - | chr3.2:70547140-70547159 | None:intergenic | 45.0% | |
ACGATCAATCCTACTGTTGC+TGG | - | chr3.2:70549295-70549314 | None:intergenic | 45.0% | |
AGATATTTGTGCACATGCGG+TGG | - | chr3.2:70548854-70548873 | None:intergenic | 45.0% | |
AGCAGGAAACTTACTTCGTG+AGG | - | chr3.2:70546085-70546104 | None:intergenic | 45.0% | |
AGTTCTTGTCTCAATGGTGG+AGG | + | chr3.2:70547448-70547467 | MS.gene25800:CDS | 45.0% | |
ATATAAGGCAGCATCTCGGT+TGG | + | chr3.2:70547561-70547580 | MS.gene25800:CDS | 45.0% | |
ATCTAATATCTACTGCCCCG+TGG | + | chr3.2:70547270-70547289 | MS.gene25800:CDS | 45.0% | |
CAAAGCAGCAAATATCGGGA+AGG | - | chr3.2:70548322-70548341 | None:intergenic | 45.0% | |
CAACCGTTAGAAACAAGGGT+AGG | - | chr3.2:70545031-70545050 | None:intergenic | 45.0% | |
CAAGGGTAGGACATGTAACA+TGG | - | chr3.2:70545018-70545037 | None:intergenic | 45.0% | |
CAGTAACTCAGTGTGTTGTG+AGG | + | chr3.2:70544653-70544672 | MS.gene25800:intron | 45.0% | |
CCAATGACCAACAACAGCAT+CGG | - | chr3.2:70546986-70547005 | None:intergenic | 45.0% | |
CGGGGCAGTAGATATTAGAT+TGG | - | chr3.2:70547270-70547289 | None:intergenic | 45.0% | |
CTATGATAGCTTGACCACTG+TGG | + | chr3.2:70548014-70548033 | MS.gene25800:intron | 45.0% | |
CTTGTTCAATCAGGGTGACA+AGG | + | chr3.2:70545901-70545920 | MS.gene25800:intron | 45.0% | |
GACAAGAACTGCAGACATCA+TGG | - | chr3.2:70547438-70547457 | None:intergenic | 45.0% | |
GCAGTCAACTGGTGCATATA+AGG | + | chr3.2:70547546-70547565 | MS.gene25800:intron | 45.0% | |
GCATAGACTCTAATCCACCA+TGG | + | chr3.2:70543576-70543595 | MS.gene25800:CDS | 45.0% | |
GTACCATGTTTGCAGTCAAC+TGG | + | chr3.2:70547535-70547554 | MS.gene25800:intron | 45.0% | |
GTCTGCAGTTCTTGTCTCAA+TGG | + | chr3.2:70547442-70547461 | MS.gene25800:CDS | 45.0% | |
GTGCATATAAGGCAGCATCT+CGG | + | chr3.2:70547557-70547576 | MS.gene25800:CDS | 45.0% | |
GTTCCCATACCCTCTACAAT+GGG | + | chr3.2:70547379-70547398 | MS.gene25800:CDS | 45.0% | |
TACAGGCATGGACATCACAT+CGG | - | chr3.2:70545397-70545416 | None:intergenic | 45.0% | |
TACCAGTAGCTCATGCGTTA+TGG | + | chr3.2:70544318-70544337 | MS.gene25800:intron | 45.0% | |
TATGTGTTGAGTCGTGGCAT+TGG | + | chr3.2:70547607-70547626 | MS.gene25800:CDS | 45.0% | |
TCGAAAAAAGTCCCCAGACT+TGG | - | chr3.2:70546670-70546689 | None:intergenic | 45.0% | |
TCTGTCATCTTGACTGCTAG+TGG | + | chr3.2:70547191-70547210 | MS.gene25800:CDS | 45.0% | |
TGACCAACAGAAAAAGTGGG+TGG | - | chr3.2:70547407-70547426 | None:intergenic | 45.0% | |
TGCAGTTCTTGTCTCAATGG+TGG | + | chr3.2:70547445-70547464 | MS.gene25800:CDS | 45.0% | |
TGCCTGTATCAGTACTTCGT+AGG | + | chr3.2:70545409-70545428 | MS.gene25800:intron | 45.0% | |
TGGAATACCGATGCTGTTGT+TGG | + | chr3.2:70546976-70546995 | MS.gene25800:CDS | 45.0% | |
TGGTTGGCAGGTAAATCACT+TGG | + | chr3.2:70547627-70547646 | MS.gene25800:intron | 45.0% | |
TGTTCCCATACCCTCTACAA+TGG | + | chr3.2:70547378-70547397 | MS.gene25800:CDS | 45.0% | |
TTCCATAACGCATGAGCTAC+TGG | - | chr3.2:70544323-70544342 | None:intergenic | 45.0% | |
TTCCCATACCCTCTACAATG+GGG | + | chr3.2:70547380-70547399 | MS.gene25800:CDS | 45.0% | |
TTCTCATCACCAGCAACAGT+AGG | + | chr3.2:70549283-70549302 | MS.gene25800:CDS | 45.0% | |
! | GGGATTGGTATCTTGCTTGA+TGG | + | chr3.2:70547890-70547909 | MS.gene25800:CDS | 45.0% |
! | TTGAAGTGTCAGTGCTACAC+AGG | - | chr3.2:70545262-70545281 | None:intergenic | 45.0% |
!! | ACGAAGTACTGATACAGGCA+TGG | - | chr3.2:70545409-70545428 | None:intergenic | 45.0% |
!!! | AAGTCTGGGGACTTTTTTCG+AGG | + | chr3.2:70546669-70546688 | MS.gene25800:CDS | 45.0% |
!!! | CGTTATTTTGAGGTACCACG+GGG | - | chr3.2:70547288-70547307 | None:intergenic | 45.0% |
!! | AAAAAATTAAACATATATTA+AGG | - | chr3.2:70545785-70545804 | None:intergenic | 5.0% |
!! | CATATTATAAATTTATAATA+TGG | + | chr3.2:70546368-70546387 | MS.gene25800:intron | 5.0% |
!! | CATATTATAAATTTATAATA+TGG | - | chr3.2:70546387-70546368 | None:intergenic | 5.0% |
!!! | TTTAATTTTAAAAAATCTAA+CGG | - | chr3.2:70544036-70544055 | None:intergenic | 5.0% |
ACAAGACTGCCTGCAGTAGT+TGG | + | chr3.2:70545989-70546008 | MS.gene25800:CDS | 50.0% | |
ACAGGATTTCCTCCCATAGC+TGG | - | chr3.2:70545744-70545763 | None:intergenic | 50.0% | |
ACTGGGCTCACATTGTTCCT+TGG | + | chr3.2:70549026-70549045 | MS.gene25800:CDS | 50.0% | |
AGAAAGATCGAGGAATGCCG+TGG | + | chr3.2:70549356-70549375 | MS.gene25800:CDS | 50.0% | |
AGGGAAAATGTGGGACTCCT+TGG | + | chr3.2:70548051-70548070 | MS.gene25800:intron | 50.0% | |
ATTTGAGCCACACCTACCGT+GGG | - | chr3.2:70546851-70546870 | None:intergenic | 50.0% | |
CAATCAGGGTGACAAGGCAA+GGG | + | chr3.2:70545907-70545926 | MS.gene25800:intron | 50.0% | |
CATGGCACCTGTAGTTGGAT+TGG | + | chr3.2:70546796-70546815 | MS.gene25800:CDS | 50.0% | |
CCAACTGCACCTGGTAAACA+AGG | - | chr3.2:70548954-70548973 | None:intergenic | 50.0% | |
CCACGACTCAACACATAAGC+AGG | - | chr3.2:70547604-70547623 | None:intergenic | 50.0% | |
CCGATGCTGTTGTTGGTCAT+TGG | + | chr3.2:70546983-70547002 | MS.gene25800:CDS | 50.0% | |
CCTGCTTATGTGTTGAGTCG+TGG | + | chr3.2:70547601-70547620 | MS.gene25800:CDS | 50.0% | |
CGACTCAACACATAAGCAGG+AGG | - | chr3.2:70547601-70547620 | None:intergenic | 50.0% | |
CTCAACACATAAGCAGGAGG+TGG | - | chr3.2:70547598-70547617 | None:intergenic | 50.0% | |
GATAGCTTGACCACTGTGGT+TGG | + | chr3.2:70548018-70548037 | MS.gene25800:intron | 50.0% | |
GATCCTCGACAACACTCTTG+AGG | + | chr3.2:70549321-70549340 | MS.gene25800:CDS | 50.0% | |
GCACCAGTTGACTGCAAACA+TGG | - | chr3.2:70547541-70547560 | None:intergenic | 50.0% | |
GCGTTTGAGAAGGTCTGTGT+CGG | - | chr3.2:70547223-70547242 | None:intergenic | 50.0% | |
GTAGGGAAAACACACCCATC+CGG | - | chr3.2:70549120-70549139 | None:intergenic | 50.0% | |
TCAATCAGGGTGACAAGGCA+AGG | + | chr3.2:70545906-70545925 | MS.gene25800:intron | 50.0% | |
TGGTCTTTATGGAACGGGGA+CGG | + | chr3.2:70547910-70547929 | MS.gene25800:CDS | 50.0% | |
TTCCAACTCGAGTCAGACCA+AGG | - | chr3.2:70548071-70548090 | None:intergenic | 50.0% | |
TTTCTCGTTCCAGCTATGGG+AGG | + | chr3.2:70545732-70545751 | MS.gene25800:CDS | 50.0% | |
! | AAGGAGTCCCACATTTTCCC+TGG | - | chr3.2:70548052-70548071 | None:intergenic | 50.0% |
! | CCTTGTTTACCAGGTGCAGT+TGG | + | chr3.2:70548951-70548970 | MS.gene25800:intron | 50.0% |
! | GACCCCATTGTAGAGGGTAT+GGG | - | chr3.2:70547385-70547404 | None:intergenic | 50.0% |
! | GTGTCTTTCTCTCTGAGGAG+AGG | + | chr3.2:70544942-70544961 | MS.gene25800:intron | 50.0% |
!! | AGATGAGAGAGAGTACCCCA+TGG | - | chr3.2:70543596-70543615 | None:intergenic | 50.0% |
!! | CAACCTCAAGAGTGTTGTCG+AGG | - | chr3.2:70549327-70549346 | None:intergenic | 50.0% |
!! | GCACCTGTAGTTGGATTGGT+TGG | + | chr3.2:70546800-70546819 | MS.gene25800:CDS | 50.0% |
!! | TGTTGAGTCGTGGCATTGGT+TGG | + | chr3.2:70547611-70547630 | MS.gene25800:CDS | 50.0% |
!!! | GGTCCACCCACTTTTTCTGT+TGG | + | chr3.2:70547401-70547420 | MS.gene25800:CDS | 50.0% |
AAAACACACCCATCCGGCGT+TGG | - | chr3.2:70549114-70549133 | None:intergenic | 55.0% | |
AAGATCGAGGAATGCCGTGG+TGG | + | chr3.2:70549359-70549378 | MS.gene25800:CDS | 55.0% | |
AGACTGCCTGCAGTAGTTGG+AGG | + | chr3.2:70545992-70546011 | MS.gene25800:CDS | 55.0% | |
AGATCGAGGAATGCCGTGGT+GGG | + | chr3.2:70549360-70549379 | MS.gene25800:CDS | 55.0% | |
AGGATTTCCCACGGTAGGTG+TGG | + | chr3.2:70546841-70546860 | MS.gene25800:intron | 55.0% | |
CAACGAGGATTTCCCACGGT+AGG | + | chr3.2:70546836-70546855 | MS.gene25800:intron | 55.0% | |
CACATAAGCAGGAGGTGGAG+TGG | - | chr3.2:70547593-70547612 | None:intergenic | 55.0% | |
CTACCGTGGGAAATCCTCGT+TGG | - | chr3.2:70546838-70546857 | None:intergenic | 55.0% | |
CTCGGTTACAGCCAAGTCTG+GGG | + | chr3.2:70546656-70546675 | MS.gene25800:CDS | 55.0% | |
CTTGGCATGGCACCTGTAGT+TGG | + | chr3.2:70546791-70546810 | MS.gene25800:CDS | 55.0% | |
GATTTGAGCCACACCTACCG+TGG | - | chr3.2:70546852-70546871 | None:intergenic | 55.0% | |
GCTCGGTTACAGCCAAGTCT+GGG | + | chr3.2:70546655-70546674 | MS.gene25800:CDS | 55.0% | |
GGACCCCATTGTAGAGGGTA+TGG | - | chr3.2:70547386-70547405 | None:intergenic | 55.0% | |
GGTCTTTATGGAACGGGGAC+GGG | + | chr3.2:70547911-70547930 | MS.gene25800:CDS | 55.0% | |
TGCTCGGTTACAGCCAAGTC+TGG | + | chr3.2:70546654-70546673 | MS.gene25800:CDS | 55.0% | |
TGGGTGGACCCCATTGTAGA+GGG | - | chr3.2:70547391-70547410 | None:intergenic | 55.0% | |
TGTTCACACCAACGCCGGAT+GGG | + | chr3.2:70549103-70549122 | MS.gene25800:CDS | 55.0% | |
! | ACTACAGGTGCCATGCCAAG+AGG | - | chr3.2:70546791-70546810 | None:intergenic | 55.0% |
! | CTCCTTGGTCTGACTCGAGT+TGG | + | chr3.2:70548066-70548085 | MS.gene25800:CDS | 55.0% |
!! | ATCCGGCGTTGGTGTGAACA+GGG | - | chr3.2:70549103-70549122 | None:intergenic | 55.0% |
!! | TGAGAGAGAGTACCCCATGG+TGG | - | chr3.2:70543593-70543612 | None:intergenic | 55.0% |
CTGTTCACACCAACGCCGGA+TGG | + | chr3.2:70549102-70549121 | MS.gene25800:CDS | 60.0% | |
GTGGGTGGACCCCATTGTAG+AGG | - | chr3.2:70547392-70547411 | None:intergenic | 60.0% | |
!! | CATCCGGCGTTGGTGTGAAC+AGG | - | chr3.2:70549104-70549123 | None:intergenic | 60.0% |
!! | GAGTCGTGGCATTGGTTGGC+AGG | + | chr3.2:70547615-70547634 | MS.gene25800:CDS | 60.0% |
GGCCCTGTTCACACCAACGC+CGG | + | chr3.2:70549098-70549117 | MS.gene25800:CDS | 65.0% | |
!! | GTTTGGTGCGCGACGCGTGT+CGG | + | chr3.2:70545293-70545312 | MS.gene25800:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 70543524 | 70549471 | 70543524 | ID=MS.gene25800 |
chr3.2 | mRNA | 70543524 | 70549471 | 70543524 | ID=MS.gene25800.t1;Parent=MS.gene25800 |
chr3.2 | exon | 70543524 | 70543599 | 70543524 | ID=MS.gene25800.t1.exon1;Parent=MS.gene25800.t1 |
chr3.2 | CDS | 70543524 | 70543599 | 70543524 | ID=cds.MS.gene25800.t1;Parent=MS.gene25800.t1 |
chr3.2 | exon | 70545664 | 70545761 | 70545664 | ID=MS.gene25800.t1.exon2;Parent=MS.gene25800.t1 |
chr3.2 | CDS | 70545664 | 70545761 | 70545664 | ID=cds.MS.gene25800.t1;Parent=MS.gene25800.t1 |
chr3.2 | exon | 70545914 | 70546090 | 70545914 | ID=MS.gene25800.t1.exon3;Parent=MS.gene25800.t1 |
chr3.2 | CDS | 70545914 | 70546090 | 70545914 | ID=cds.MS.gene25800.t1;Parent=MS.gene25800.t1 |
chr3.2 | exon | 70546590 | 70546690 | 70546590 | ID=MS.gene25800.t1.exon4;Parent=MS.gene25800.t1 |
chr3.2 | CDS | 70546590 | 70546690 | 70546590 | ID=cds.MS.gene25800.t1;Parent=MS.gene25800.t1 |
chr3.2 | exon | 70546778 | 70546853 | 70546778 | ID=MS.gene25800.t1.exon5;Parent=MS.gene25800.t1 |
chr3.2 | CDS | 70546778 | 70546853 | 70546778 | ID=cds.MS.gene25800.t1;Parent=MS.gene25800.t1 |
chr3.2 | exon | 70546956 | 70547015 | 70546956 | ID=MS.gene25800.t1.exon6;Parent=MS.gene25800.t1 |
chr3.2 | CDS | 70546956 | 70547015 | 70546956 | ID=cds.MS.gene25800.t1;Parent=MS.gene25800.t1 |
chr3.2 | exon | 70547104 | 70547291 | 70547104 | ID=MS.gene25800.t1.exon7;Parent=MS.gene25800.t1 |
chr3.2 | CDS | 70547104 | 70547291 | 70547104 | ID=cds.MS.gene25800.t1;Parent=MS.gene25800.t1 |
chr3.2 | exon | 70547373 | 70547469 | 70547373 | ID=MS.gene25800.t1.exon8;Parent=MS.gene25800.t1 |
chr3.2 | CDS | 70547373 | 70547469 | 70547373 | ID=cds.MS.gene25800.t1;Parent=MS.gene25800.t1 |
chr3.2 | exon | 70547550 | 70547636 | 70547550 | ID=MS.gene25800.t1.exon9;Parent=MS.gene25800.t1 |
chr3.2 | CDS | 70547550 | 70547636 | 70547550 | ID=cds.MS.gene25800.t1;Parent=MS.gene25800.t1 |
chr3.2 | exon | 70547890 | 70547948 | 70547890 | ID=MS.gene25800.t1.exon10;Parent=MS.gene25800.t1 |
chr3.2 | CDS | 70547890 | 70547948 | 70547890 | ID=cds.MS.gene25800.t1;Parent=MS.gene25800.t1 |
chr3.2 | exon | 70548053 | 70548144 | 70548053 | ID=MS.gene25800.t1.exon11;Parent=MS.gene25800.t1 |
chr3.2 | CDS | 70548053 | 70548144 | 70548053 | ID=cds.MS.gene25800.t1;Parent=MS.gene25800.t1 |
chr3.2 | exon | 70548289 | 70548366 | 70548289 | ID=MS.gene25800.t1.exon12;Parent=MS.gene25800.t1 |
chr3.2 | CDS | 70548289 | 70548366 | 70548289 | ID=cds.MS.gene25800.t1;Parent=MS.gene25800.t1 |
chr3.2 | exon | 70548964 | 70549124 | 70548964 | ID=MS.gene25800.t1.exon13;Parent=MS.gene25800.t1 |
chr3.2 | CDS | 70548964 | 70549124 | 70548964 | ID=cds.MS.gene25800.t1;Parent=MS.gene25800.t1 |
chr3.2 | exon | 70549259 | 70549471 | 70549259 | ID=MS.gene25800.t1.exon14;Parent=MS.gene25800.t1 |
chr3.2 | CDS | 70549259 | 70549471 | 70549259 | ID=cds.MS.gene25800.t1;Parent=MS.gene25800.t1 |
Gene Sequence |
Protein sequence |