AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene062886

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 316 sgRNAs with CRISPR-Local

Find 512 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAGATGTTACTGCAATTT+TGG 0.158568 4.1:-31854110 MS.gene062886:CDS
GCAGGGAACATGACCGATTT+TGG 0.182012 4.1:-31855831 MS.gene062886:CDS
GTCCTTCTGTCCACGATAAA+TGG 0.194623 4.1:+31853169 None:intergenic
GTTTCACAATGCCTTATATA+TGG 0.197876 4.1:-31854473 MS.gene062886:CDS
ACTGTTCGTGTTTGGGATAT+TGG 0.251602 4.1:-31856890 MS.gene062886:CDS
TCTCAACCTCTCTTTGTATC+TGG 0.256432 4.1:-31859198 MS.gene062886:CDS
GATCCTCCAAGACCTTTCTT+TGG 0.263089 4.1:+31855450 None:intergenic
AGATAATCTTTCAAAATTCT+TGG 0.266597 4.1:+31854579 None:intergenic
GTTGTCGGGGCCGATGCTTC+TGG 0.268896 4.1:-31853071 MS.gene062886:CDS
TGAAAGGCTTGCTGCTGAAC+TGG 0.277267 4.1:-31854356 MS.gene062886:CDS
TGGATCAGACTGTTCGTGTT+TGG 0.296483 4.1:-31856898 MS.gene062886:CDS
TATATAAGGCATTGTGAAAC+TGG 0.297932 4.1:+31854476 None:intergenic
GAGTCTTAGGACTTTGATTC+AGG 0.304130 4.1:+31855601 None:intergenic
AAAAGTTCAATCAACGAATC+TGG 0.306067 4.1:+31853030 None:intergenic
GGACTGTAGGAAAGAGTCTT+AGG 0.310531 4.1:+31855588 None:intergenic
AGGATAAAAGTATTCGAGTA+TGG 0.310883 4.1:-31855888 MS.gene062886:CDS
TCGAATATCACCCATATATA+AGG 0.311045 4.1:+31854462 None:intergenic
GACACGACAATATCCTCTTT+TGG 0.316386 4.1:+31856929 None:intergenic
ACAAAACGGGAAGTACAATA+TGG 0.319662 4.1:+31853137 None:intergenic
TAACTGCCATCCCAGGTGTT+GGG 0.319739 4.1:+31853963 None:intergenic
GCTGCCAACAGATTCATTTC+AGG 0.320839 4.1:+31855793 None:intergenic
GTCATGACCGGGGTGTCAAC+TGG 0.322603 4.1:-31856757 MS.gene062886:CDS
GTGGTGATTGGCCGCTCCTT+AGG 0.325292 4.1:-31854261 MS.gene062886:CDS
GGATCAGACTGTTCGTGTTT+GGG 0.326675 4.1:-31856897 MS.gene062886:CDS
ATCCAAGGATAGCACAATTA+AGG 0.340197 4.1:-31855502 MS.gene062886:CDS
GCCGGTGGGCCTCTCACATT+TGG 0.341441 4.1:+31853713 None:intergenic
GATGTTGATGGATTGGAAAA+TGG 0.344399 4.1:-31854130 MS.gene062886:CDS
AGGGGATGATTACAAGATTA+AGG 0.346906 4.1:-31857155 MS.gene062886:CDS
GCTGCTGATCATGCAGCTGC+TGG 0.348665 4.1:-31853911 MS.gene062886:CDS
CTTCAGCAGAGGATTGTTCT+TGG 0.354032 4.1:-31855243 MS.gene062886:CDS
TCGAGAGCGTGTTAAGATCT+TGG 0.357266 4.1:-31854443 MS.gene062886:CDS
AATATAGCATCAGTGGCAAT+AGG 0.363649 4.1:+31855324 None:intergenic
AGGTGCTTATTCACTCTTCT+AGG 0.366099 4.1:-31857112 MS.gene062886:CDS
CAGTGCATAGCTGCCCCTCC+TGG 0.369210 4.1:+31853108 None:intergenic
TCCTCCAAAGTTTCACTTGA+CGG 0.370751 4.1:+31856687 None:intergenic
CAGTCTTTGTGGCTCGGAAT+AGG 0.376968 4.1:-31855425 MS.gene062886:CDS
AGCACAATTAAGGACAGTTT+TGG 0.378507 4.1:-31855492 MS.gene062886:CDS
GGTGATTGGGTTGAGGATAT+CGG 0.384867 4.1:-31854157 MS.gene062886:CDS
TGGAAATACCATCTTCTGCT+TGG 0.386501 4.1:-31854947 MS.gene062886:CDS
GCGAGTTCCTGCTGGCGTGC+TGG 0.386545 4.1:+31853455 None:intergenic
AAACCATTCGCATCTGGAAT+TGG 0.386712 4.1:-31857018 MS.gene062886:CDS
TGGTGATTGGCCGCTCCTTA+GGG 0.391348 4.1:-31854260 MS.gene062886:CDS
CATTACCAGTGATGAGATAT+AGG 0.398300 4.1:+31854554 None:intergenic
TCCTCAACCCAATCACCTTC+AGG 0.403174 4.1:+31854163 None:intergenic
CTTGCCTTGCTGTCTTAGCT+TGG 0.403343 4.1:+31853285 None:intergenic
ATGATCTCTGAATCCATATC+TGG 0.404633 4.1:+31853939 None:intergenic
TGGAGGATCAGCAGTCTTTG+TGG 0.407430 4.1:-31855436 MS.gene062886:CDS
GCTCTGTAGGTCTGAGGATA+GGG 0.408698 4.1:-31855280 MS.gene062886:CDS
AGCTTTCCTTGTTGAAGAAA+AGG 0.412163 4.1:-31854870 MS.gene062886:CDS
ATGATGCTCCTGAAGGTGAT+TGG 0.412669 4.1:-31854171 MS.gene062886:CDS
ACAACCTTGGTGATATAGAT+TGG 0.414560 4.1:+31854970 None:intergenic
GTCCTTAATTGTGCTATCCT+TGG 0.415036 4.1:+31855500 None:intergenic
CGACAATCAAAGGGATTGTA+TGG 0.416201 4.1:+31853585 None:intergenic
GGATGGCAGTTAGCCAGATA+TGG 0.417146 4.1:-31853952 MS.gene062886:CDS
ATCTTCTGCTTGGGCCGGGA+TGG 0.418164 4.1:-31854937 MS.gene062886:CDS
AAGGTGATGAAGAGGGTGGA+TGG 0.421905 4.1:-31854066 MS.gene062886:CDS
CTGTACTGTGTTGTGGTGAT+TGG 0.423016 4.1:-31854273 MS.gene062886:CDS
TTTCACAATGCCTTATATAT+GGG 0.426532 4.1:-31854472 MS.gene062886:CDS
ATCTATATCACCAAGGTTGT+TGG 0.426936 4.1:-31854967 MS.gene062886:CDS
TCTAATTGAGACAATTTGTA+AGG 0.428765 4.1:+31853686 None:intergenic
GGAAATACCATCTTCTGCTT+GGG 0.429343 4.1:-31854946 MS.gene062886:CDS
ATTATCCCACTGTCTCCATT+TGG 0.430377 4.1:+31855009 None:intergenic
TGTGTGAACTTTCAGTTGTC+GGG 0.430474 4.1:-31853085 MS.gene062886:CDS
AGGGATTGTATGGAGAATAT+TGG 0.430523 4.1:+31853595 None:intergenic
ATGATCAAACCATTCGCATC+TGG 0.431138 4.1:-31857024 MS.gene062886:CDS
CTAACTGCCATCCCAGGTGT+TGG 0.432323 4.1:+31853962 None:intergenic
GTTGCCCCACAGATTACAAA+TGG 0.434894 4.1:+31853200 None:intergenic
GGTTATAAGTCAACAACTGC+TGG 0.434897 4.1:-31853647 MS.gene062886:CDS
CTGCAATGAGATTACTGAAC+AGG 0.435264 4.1:-31853877 MS.gene062886:CDS
CAAGAACCAAAGAAAGGTCT+TGG 0.436954 4.1:-31855456 MS.gene062886:CDS
TGAAGAGGGTGGATGGGAGC+TGG 0.440849 4.1:-31854059 MS.gene062886:CDS
CGTGTACTGACAGAAGCTTT+TGG 0.442637 4.1:+31854004 None:intergenic
TGTACCACTTGCTGTTGAAA+GGG 0.445806 4.1:-31853756 MS.gene062886:CDS
GGGATATTGGTTCTCTCAAA+AGG 0.445808 4.1:-31856877 MS.gene062886:CDS
TCAACAGCAAGTGGTACAAC+TGG 0.446758 4.1:+31853761 None:intergenic
GAAAGGCTTGCTGCTGAACT+GGG 0.447752 4.1:-31854355 MS.gene062886:CDS
CCCAGTTAAAACAGATATAC+AGG 0.447997 4.1:+31856985 None:intergenic
TGAAAATGAACGCCACGAAC+AGG 0.448003 4.1:+31859225 None:intergenic
ATGAAGCACACATAACATAA+TGG 0.453476 4.1:+31856957 None:intergenic
ATATAGCATCAGTGGCAATA+GGG 0.456315 4.1:+31855325 None:intergenic
ATCAAATACTGCCTTCCAAA+TGG 0.457841 4.1:-31855024 MS.gene062886:CDS
TGACACAATGATGTCCTGTT+TGG 0.460762 4.1:+31855918 None:intergenic
TATTGTCGTGTCAGCCTCCC+TGG 0.461832 4.1:-31856918 MS.gene062886:CDS
GGAAATTCACTGAGGCTCTT+CGG 0.462222 4.1:-31853625 MS.gene062886:CDS
GATATACTCAGTAGCATCAA+TGG 0.465267 4.1:+31854897 None:intergenic
ACAAGGCAATGCTGGTATAG+TGG 0.465965 4.1:-31854620 MS.gene062886:CDS
GATTACTGAACAGGCAGCTT+GGG 0.467138 4.1:-31853868 MS.gene062886:CDS
GTGTGTGAACTTTCAGTTGT+CGG 0.467370 4.1:-31853086 MS.gene062886:CDS
CGGCTTGGATGTTGATGGAT+TGG 0.468184 4.1:-31854137 MS.gene062886:CDS
TGATGCTCCTGAAGGTGATT+GGG 0.471275 4.1:-31854170 MS.gene062886:CDS
TACCATCTTCTGCTTGGGCC+GGG 0.471495 4.1:-31854941 MS.gene062886:CDS
TTGTACCACTTGCTGTTGAA+AGG 0.472345 4.1:-31853757 MS.gene062886:CDS
CAGCTATGGGACTATCGAAT+GGG 0.472804 4.1:-31859282 MS.gene062886:CDS
TCCTTCTGTCCACGATAAAT+GGG 0.473035 4.1:+31853170 None:intergenic
AGACTACATACTTGATGAAA+GGG 0.474135 4.1:+31855208 None:intergenic
CCTCCTGGGTTGGTACAAAA+CGG 0.475085 4.1:+31853123 None:intergenic
TCTTCAAGCTGGAGAGAGAA+AGG 0.476413 4.1:-31855747 MS.gene062886:CDS
ACACTGCCTCTTATTGTCTC+AGG 0.476461 4.1:-31856719 MS.gene062886:CDS
TGCAGATGGAGCTGAAAAGA+AGG 0.476844 4.1:-31853493 MS.gene062886:CDS
ACTTTCCCCTCGGGCAAAGA+TGG 0.477374 4.1:+31854322 None:intergenic
CTCCTGGGTTGGTACAAAAC+GGG 0.480291 4.1:+31853124 None:intergenic
GATATCGGCTTGGATGTTGA+TGG 0.480401 4.1:-31854142 MS.gene062886:CDS
AGACACAAGTACTTACTATT+CGG 0.480626 4.1:-31855642 MS.gene062886:CDS
ATAAAGAATTCACAACTTTG+TGG 0.480719 4.1:-31854826 MS.gene062886:CDS
GTCATGCGAGGCATATTTGA+TGG 0.481025 4.1:-31854238 MS.gene062886:CDS
AGTGCATAGCTGCCCCTCCT+GGG 0.481089 4.1:+31853109 None:intergenic
ATCTAGGAACATGGATCTCA+AGG 0.482517 4.1:+31853829 None:intergenic
AAACACGAACAGTCTGATCC+AGG 0.483052 4.1:+31856900 None:intergenic
ATGACCGTCAAGTGAAACTT+TGG 0.483105 4.1:-31856691 MS.gene062886:CDS
GCTCTTCGACAAGGCAATGC+TGG 0.485293 4.1:-31854628 MS.gene062886:CDS
TGTTATGTTCCATGCCAAAC+AGG 0.485732 4.1:-31855932 MS.gene062886:CDS
AGGTGATGAAGAGGGTGGAT+GGG 0.486565 4.1:-31854065 MS.gene062886:CDS
AACTGCCATCCCAGGTGTTG+GGG 0.487179 4.1:+31853964 None:intergenic
AGACACTAAGGCATGGGAAG+TGG 0.489697 4.1:-31855989 MS.gene062886:CDS
TCTTCTGCTTGGGCCGGGAT+GGG 0.490934 4.1:-31854936 MS.gene062886:CDS
TAAGACAGCAAGGCAAGTGC+TGG 0.491247 4.1:-31853279 MS.gene062886:CDS
CACTTGCTGTTGAAAGGGGT+TGG 0.491446 4.1:-31853751 MS.gene062886:CDS
AAAGATCACTGGTACCGATT+GGG 0.496714 4.1:-31854658 MS.gene062886:CDS
AGAAACCCATTTGTAATCTG+TGG 0.498386 4.1:-31853206 MS.gene062886:CDS
ATACCATCTTCTGCTTGGGC+CGG 0.499831 4.1:-31854942 MS.gene062886:CDS
TGCGAGGCATATTTGATGGT+GGG 0.499976 4.1:-31854234 MS.gene062886:CDS
GTGAAACTTTGGAGGATGAA+TGG 0.500349 4.1:-31856680 MS.gene062886:intron
GGTTCTCTCAAAAGGAAGGC+TGG 0.500905 4.1:-31856869 MS.gene062886:CDS
AGATTACTGAACAGGCAGCT+TGG 0.501054 4.1:-31853869 MS.gene062886:CDS
TGTGGCCCCAACACCTGGGA+TGG 0.502148 4.1:-31853969 MS.gene062886:CDS
GCAAAGAACCTTGCCACAGC+TGG 0.502678 4.1:-31853353 MS.gene062886:CDS
CGTTGAGTCAAGGAGGGAAG+TGG 0.503101 4.1:-31853564 MS.gene062886:CDS
CATAGTCAAAGAGTATGTTC+TGG 0.506264 4.1:-31853519 MS.gene062886:CDS
GACAATTTGTAAGGAAGTGC+CGG 0.508613 4.1:+31853695 None:intergenic
GAGGGAAGTGGATGATGTAA+AGG 0.509644 4.1:-31853552 MS.gene062886:CDS
GATGGAGAGGCGGCTGAAGA+AGG 0.510253 4.1:-31854085 MS.gene062886:CDS
GAACAGGAAACTTGCTCTGT+AGG 0.512630 4.1:-31855293 MS.gene062886:CDS
CTTGACTCAACGACAATCAA+AGG 0.512673 4.1:+31853575 None:intergenic
ACAGTGGTGTGATCCAGCTA+TGG 0.512687 4.1:-31859296 MS.gene062886:CDS
GAAACCCATTTGTAATCTGT+GGG 0.513589 4.1:-31853205 MS.gene062886:CDS
CAGCAACGTCATGTAGCCCA+TGG 0.513892 4.1:+31854377 None:intergenic
TTTGGAGTGTCTGCTTCAGG+GGG 0.513913 4.1:+31854022 None:intergenic
TGCTCTGTAGGTCTGAGGAT+AGG 0.517367 4.1:-31855281 MS.gene062886:CDS
TACTTACTATTCGGCGACCC+TGG 0.517735 4.1:-31855633 MS.gene062886:CDS
CTTTCATCAAGTATGTAGTC+TGG 0.518350 4.1:-31855206 MS.gene062886:CDS
CCATTCGATAGTCCCATAGC+TGG 0.518806 4.1:+31859283 None:intergenic
CATAGCTGCCCCTCCTGGGT+TGG 0.519545 4.1:+31853113 None:intergenic
CTTTGATTGTCGTTGAGTCA+AGG 0.520507 4.1:-31853574 MS.gene062886:CDS
TATATCACTGCATCAACCCA+TGG 0.521132 4.1:-31854394 MS.gene062886:CDS
TCACTAGCACTCACAATCCA+TGG 0.521602 4.1:+31857046 None:intergenic
GACTGGCAGAATGAAGATCT+AGG 0.523582 4.1:+31853813 None:intergenic
CAACCTTGGTGATATAGATT+GGG 0.523975 4.1:+31854971 None:intergenic
GTATGTTCTGGCTCTGCAGA+TGG 0.525433 4.1:-31853507 MS.gene062886:CDS
TCTTTCCTATATCTCATCAC+TGG 0.528733 4.1:-31854559 MS.gene062886:CDS
TGCTTCATTCCATCCAAAAG+AGG 0.529176 4.1:-31856942 MS.gene062886:CDS
ATCTGGCTAACTGCCATCCC+AGG 0.531022 4.1:+31853956 None:intergenic
TTCAATCAACGAATCTGGGC+AGG 0.531660 4.1:+31853035 None:intergenic
GAGTTGAAAGAATCCAAAAT+CGG 0.532068 4.1:+31855818 None:intergenic
CCACAGCTGGTAACTTCGCT+AGG 0.532239 4.1:-31853340 MS.gene062886:CDS
TGTTAAGATCTTGGAGAATG+TGG 0.534742 4.1:-31854434 MS.gene062886:CDS
ATGTGTTGGAAGGTCATGAC+CGG 0.535123 4.1:-31856769 MS.gene062886:CDS
AAAGTTCAATCAACGAATCT+GGG 0.536597 4.1:+31853031 None:intergenic
TACAACTGGAGCGGATGAAA+AGG 0.536605 4.1:+31853775 None:intergenic
CAACCTCTCTTTGTATCTGG+AGG 0.539097 4.1:-31859195 MS.gene062886:intron
GAAAGATCACTGGTACCGAT+TGG 0.539177 4.1:-31854659 MS.gene062886:CDS
TTGACTCAACGACAATCAAA+GGG 0.539280 4.1:+31853576 None:intergenic
TGATTCAGGCTTAAAGAACC+AGG 0.540601 4.1:+31855615 None:intergenic
TTAGATGAAAAGCTCAAAGC+TGG 0.540893 4.1:-31853668 MS.gene062886:CDS
ATTGCTTATCTACAACAGAA+AGG 0.541718 4.1:-31854793 MS.gene062886:CDS
ATGATTACAAGATTAAGGTC+TGG 0.542131 4.1:-31857150 MS.gene062886:CDS
GAAATGAATCTGTTGGCAGC+TGG 0.542240 4.1:-31855790 MS.gene062886:CDS
CAGACTACATACTTGATGAA+AGG 0.543032 4.1:+31855207 None:intergenic
TTGGCAGCTGGTCATGATAG+TGG 0.543156 4.1:-31855778 MS.gene062886:CDS
CAAAACGGGAAGTACAATAT+GGG 0.545307 4.1:+31853138 None:intergenic
TACACGGATTGTCTCGTGGA+GGG 0.547050 4.1:+31855101 None:intergenic
AGAGATGGTACTTTCCCCTC+GGG 0.548228 4.1:+31854313 None:intergenic
ATCCCGGCCCAAGCAGAAGA+TGG 0.548758 4.1:+31854939 None:intergenic
TCGGTCATGTTCCCTGCGGA+AGG 0.548963 4.1:+31855837 None:intergenic
AATATGCTGCGAGTTCCTGC+TGG 0.549069 4.1:+31853447 None:intergenic
ACAAAATGGAGAGCAACCTC+AGG 0.549262 4.1:+31854766 None:intergenic
ATGCGAGGCATATTTGATGG+TGG 0.549368 4.1:-31854235 MS.gene062886:CDS
ATATGCCTCGCATGACCCTA+AGG 0.550788 4.1:+31854245 None:intergenic
GATCAGCAGTCTTTGTGGCT+CGG 0.552616 4.1:-31855431 MS.gene062886:CDS
GAACCAAAGAAAGGTCTTGG+AGG 0.554550 4.1:-31855453 MS.gene062886:CDS
CTGGTATTCAAACCTTCCGC+AGG 0.555286 4.1:-31855849 MS.gene062886:CDS
AGCATAAAATATAGCATCAG+TGG 0.557606 4.1:+31855317 None:intergenic
TCTTTATCATGTTCATAACA+TGG 0.557803 4.1:+31854842 None:intergenic
GGACAATCCAGCACGCCAGC+AGG 0.557915 4.1:-31853462 MS.gene062886:CDS
GCTGAAAAGAAGGGAAATGA+AGG 0.558161 4.1:-31853483 MS.gene062886:CDS
TCAGCTCCTGAGACAATAAG+AGG 0.559255 4.1:+31856713 None:intergenic
TGAAGACTCGCAAGTATCCA+TGG 0.559484 4.1:+31859318 None:intergenic
TTGCCCCACAGATTACAAAT+GGG 0.560689 4.1:+31853201 None:intergenic
GCACTGTACGAATATAATCA+AGG 0.561590 4.1:+31857086 None:intergenic
CCAGCTATGGGACTATCGAA+TGG 0.563404 4.1:-31859283 MS.gene062886:CDS
TTCATCGAATCGATCAATCA+AGG 0.563781 4.1:+31859257 None:intergenic
ATCATTACTAACAGCGAAGG+CGG 0.563818 4.1:+31855723 None:intergenic
TGTCATTGCTAGCAAGAAGC+TGG 0.564334 4.1:-31855136 MS.gene062886:CDS
CAGTGGTGTGATCCAGCTAT+GGG 0.566633 4.1:-31859295 MS.gene062886:CDS
GAGAGATGGTACTTTCCCCT+CGG 0.567239 4.1:+31854312 None:intergenic
AAGTGCTGGCTGCTGCAGAA+AGG 0.567535 4.1:-31853265 MS.gene062886:CDS
GACGAAAAGTAACAGAGTGA+AGG 0.567546 4.1:-31859364 MS.gene062886:CDS
TCATCCTGAAATGAATCTGT+TGG 0.567908 4.1:-31855797 MS.gene062886:CDS
TCATGACCGGGGTGTCAACT+GGG 0.568969 4.1:-31856756 MS.gene062886:CDS
CCATCACCTGTACTGTGTTG+TGG 0.569317 4.1:-31854280 MS.gene062886:CDS
GATGGTATTTCCAACAACCT+TGG 0.569731 4.1:+31854957 None:intergenic
TCCCACTGTCTCCATTTGGA+AGG 0.570192 4.1:+31855013 None:intergenic
TGCAGTTGTTAAGTATGTGT+TGG 0.572241 4.1:-31856783 MS.gene062886:CDS
CATCATTGTGTCAAATTCTG+AGG 0.572764 4.1:-31855908 MS.gene062886:CDS
GCAGATGGAGCTGAAAAGAA+GGG 0.574200 4.1:-31853492 MS.gene062886:CDS
TCCAAATGTGAGAGGCCCAC+CGG 0.575857 4.1:-31853714 MS.gene062886:CDS
TCTGGAACTATAAGATGCAT+AGG 0.576494 4.1:-31857132 MS.gene062886:CDS
GTTTCCACAGCAAGAGACCA+TGG 0.576786 4.1:-31859335 MS.gene062886:CDS
ACGAAAAGTAACAGAGTGAA+GGG 0.577775 4.1:-31859363 MS.gene062886:CDS
CAATCACCACAACACAGTAC+AGG 0.578337 4.1:+31854274 None:intergenic
GGCGCGAAGATACGAGTGAC+TGG 0.578464 4.1:+31853796 None:intergenic
GGATAAAAGTATTCGAGTAT+GGG 0.580321 4.1:-31855887 MS.gene062886:CDS
GAAGAGCTTCAACTCCCAAT+CGG 0.580388 4.1:+31854644 None:intergenic
TGGCATGATAGTCTTCAAGC+TGG 0.580699 4.1:-31855758 MS.gene062886:CDS
GAACATGATGGTCCTGTTCG+TGG 0.581846 4.1:-31859237 MS.gene062886:CDS
TTGGGTTGAGGATATCGGCT+TGG 0.582157 4.1:-31854152 MS.gene062886:CDS
ACCGTCAAGTGAAACTTTGG+AGG 0.582930 4.1:-31856688 MS.gene062886:CDS
ACCTATGTGCCCATTTATCG+TGG 0.583139 4.1:-31853179 MS.gene062886:CDS
GGCTACATGACGTTGCTGAA+AGG 0.584631 4.1:-31854372 MS.gene062886:CDS
AATCGCAAAATATCATCTGA+AGG 0.584671 4.1:+31856842 None:intergenic
CTCTGCTCTGATGTGGACGG+TGG 0.584677 4.1:-31855546 MS.gene062886:CDS
ACAGAGCAATCCAGAAGCAT+CGG 0.586652 4.1:+31853061 None:intergenic
TCTAGGAACATGGATCTCAA+GGG 0.591542 4.1:+31853830 None:intergenic
GATATGCAAGAACCAAAGAA+AGG 0.593716 4.1:-31855462 MS.gene062886:CDS
GGCTGAAGAAGGTGATGAAG+AGG 0.593752 4.1:-31854074 MS.gene062886:CDS
AACGTTCCATCTTTGCCCGA+GGG 0.594187 4.1:-31854328 MS.gene062886:CDS
GCCCATTTATCGTGGACAGA+AGG 0.594536 4.1:-31853171 MS.gene062886:CDS
TTCAATTGGCTATAGAGAGT+GGG 0.594774 4.1:-31854724 MS.gene062886:intron
CAACGTTCCATCTTTGCCCG+AGG 0.595129 4.1:-31854329 MS.gene062886:CDS
GTTATAAGTCAACAACTGCT+GGG 0.595561 4.1:-31853646 MS.gene062886:CDS
CAACCCCTTTCAACAGCAAG+TGG 0.595791 4.1:+31853752 None:intergenic
TCATTACTAACAGCGAAGGC+GGG 0.596728 4.1:+31855724 None:intergenic
CAATGATGTCCTGTTTGGCA+TGG 0.597090 4.1:+31855923 None:intergenic
CGAAGTTACCAGCTGTGGCA+AGG 0.597869 4.1:+31853345 None:intergenic
AATTCTTCTCTGCTCTGATG+TGG 0.597935 4.1:-31855553 MS.gene062886:CDS
TGGGAAGTGGATACTTTGAG+AGG 0.598556 4.1:-31855976 MS.gene062886:CDS
GTATCCATGGTCTCTTGCTG+TGG 0.602808 4.1:+31859331 None:intergenic
AATTTCATCATGAGAACCCA+TGG 0.603643 4.1:-31857063 MS.gene062886:CDS
GAGACAATAAGAGGCAGTGT+AGG 0.605951 4.1:+31856722 None:intergenic
AAAGGCTTGCTGCTGAACTG+GGG 0.606436 4.1:-31854354 MS.gene062886:CDS
TGGGATGCAACAAAGAGGAC+TGG 0.606544 4.1:-31855868 MS.gene062886:CDS
CTGCCAATTCCAGATGCGAA+TGG 0.606557 4.1:+31857015 None:intergenic
TCCTGAAGGTGATTGGGTTG+AGG 0.607105 4.1:-31854164 MS.gene062886:CDS
CTTCTCTGCTCTGATGTGGA+CGG 0.607520 4.1:-31855549 MS.gene062886:CDS
GATCGATTCGATGAACATGA+TGG 0.608263 4.1:-31859249 MS.gene062886:CDS
ATATCACTGCATCAACCCAT+GGG 0.608613 4.1:-31854393 MS.gene062886:CDS
CCTAGCGAAGTTACCAGCTG+TGG 0.609607 4.1:+31853340 None:intergenic
CCACAACACAGTACAGGTGA+TGG 0.610831 4.1:+31854280 None:intergenic
AGCAACGTCATGTAGCCCAT+GGG 0.612640 4.1:+31854378 None:intergenic
ATCTTCAGACACCTCACTTG+AGG 0.616144 4.1:-31853412 MS.gene062886:CDS
TGCCTTCCAAATGGAGACAG+TGG 0.616943 4.1:-31855015 MS.gene062886:CDS
AATTTGTAAGGAAGTGCCGG+TGG 0.616973 4.1:+31853698 None:intergenic
AAGCAGCCCAGTTGACACCC+CGG 0.618127 4.1:+31856750 None:intergenic
CACTAGCACTCACAATCCAT+GGG 0.618938 4.1:+31857047 None:intergenic
TGAAGTCAAGAATGATGTCA+TGG 0.619645 4.1:-31854500 MS.gene062886:CDS
GTTAAGATCTTGGAGAATGT+GGG 0.619677 4.1:-31854433 MS.gene062886:CDS
GATGGAGGTATCAAGAGAGA+TGG 0.619919 4.1:+31854298 None:intergenic
AACACGAACAGTCTGATCCA+GGG 0.620192 4.1:+31856901 None:intergenic
TATTGGTTCTCTCAAAAGGA+AGG 0.621027 4.1:-31856873 MS.gene062886:CDS
GCCTTCCAAATGGAGACAGT+GGG 0.622318 4.1:-31855014 MS.gene062886:CDS
TGAGTTGTACTGCATATCCA+AGG 0.622737 4.1:-31855517 MS.gene062886:CDS
TTGGAGTGTCTGCTTCAGGG+GGG 0.623147 4.1:+31854023 None:intergenic
GGAGTTGAAGCTCTTCGACA+AGG 0.623731 4.1:-31854637 MS.gene062886:CDS
GATTCAGGCTTAAAGAACCA+GGG 0.628986 4.1:+31855616 None:intergenic
GATTGTCGTTGAGTCAAGGA+GGG 0.629168 4.1:-31853570 MS.gene062886:CDS
CTAGGAACATGGATCTCAAG+GGG 0.632378 4.1:+31853831 None:intergenic
CAAAAGCTTCTGTCAGTACA+CGG 0.632978 4.1:-31854003 MS.gene062886:CDS
GAAGAAGGTGATGAAGAGGG+TGG 0.634216 4.1:-31854070 MS.gene062886:CDS
CGCAAAATATCATCTGAAGG+AGG 0.635960 4.1:+31856845 None:intergenic
TGATATAAGCAAGAGGCAAG+TGG 0.637255 4.1:+31854410 None:intergenic
GTTGTTAAGTATGTGTTGGA+AGG 0.637437 4.1:-31856779 MS.gene062886:CDS
AGAATCATTACTAACAGCGA+AGG 0.639502 4.1:+31855720 None:intergenic
AAGGAATATGACTGATGCCA+CGG 0.640040 4.1:-31853246 MS.gene062886:CDS
GTACCACTTGCTGTTGAAAG+GGG 0.640358 4.1:-31853755 MS.gene062886:CDS
AAACTTGCTCTGTAGGTCTG+AGG 0.640502 4.1:-31855286 MS.gene062886:CDS
TAGTGGAGTATGCATATCAG+AGG 0.641236 4.1:-31854603 MS.gene062886:CDS
TTATATTTGATCTTCAGCAG+AGG 0.642399 4.1:-31855254 MS.gene062886:CDS
TTACACGGATTGTCTCGTGG+AGG 0.644963 4.1:+31855100 None:intergenic
AGCGGAGCCTGGGATGACAA+TGG 0.646326 4.1:-31855075 MS.gene062886:CDS
CCGCTCCTTAGGGTCATGCG+AGG 0.646346 4.1:-31854250 MS.gene062886:CDS
GACTACATACTTGATGAAAG+GGG 0.648551 4.1:+31855209 None:intergenic
CAATTGATGAGAAAGATCAC+TGG 0.652291 4.1:-31854669 MS.gene062886:CDS
AAAACCAAGCTAAGACAGCA+AGG 0.652934 4.1:-31853289 MS.gene062886:CDS
CAACACAGTACAGGTGATGG+AGG 0.656295 4.1:+31854283 None:intergenic
AAGGCTTGCTGCTGAACTGG+GGG 0.656859 4.1:-31854353 MS.gene062886:CDS
GCTGAAGAAGGTGATGAAGA+GGG 0.656878 4.1:-31854073 MS.gene062886:CDS
AGCAAGTGGTACAACTGGAG+CGG 0.656994 4.1:+31853766 None:intergenic
TGTGTTGGAAGGTCATGACC+GGG 0.657352 4.1:-31856768 MS.gene062886:CDS
TCGTCTAGTCCAAATGTGAG+AGG 0.657993 4.1:-31853722 MS.gene062886:CDS
TCCACGATAAATGGGCACAT+AGG 0.658647 4.1:+31853178 None:intergenic
TGATTGTCGTTGAGTCAAGG+AGG 0.661965 4.1:-31853571 MS.gene062886:CDS
GAGTTTGATGATGCTCCTGA+AGG 0.666246 4.1:-31854178 MS.gene062886:CDS
GGGAAGTGGATACTTTGAGA+GGG 0.667352 4.1:-31855975 MS.gene062886:CDS
CCTCGCATGACCCTAAGGAG+CGG 0.668842 4.1:+31854250 None:intergenic
GAAGTCAAGAATGATGTCAT+GGG 0.672095 4.1:-31854499 MS.gene062886:CDS
GTGTGAACTTTCAGTTGTCG+GGG 0.672377 4.1:-31853084 MS.gene062886:CDS
AACAAAGCTAGCCTCAAGTG+AGG 0.677918 4.1:+31853401 None:intergenic
ACGTTCCATCTTTGCCCGAG+GGG 0.680200 4.1:-31854327 MS.gene062886:CDS
TGGTATTCAAACCTTCCGCA+GGG 0.680597 4.1:-31855848 MS.gene062886:CDS
AGAATGAAGATCTAGGAACA+TGG 0.681471 4.1:+31853820 None:intergenic
GATGCAGTGATATAAGCAAG+AGG 0.683682 4.1:+31854403 None:intergenic
ATTTGTAAGGAAGTGCCGGT+GGG 0.683766 4.1:+31853699 None:intergenic
GAGTATGGGATGCAACAAAG+AGG 0.685401 4.1:-31855873 MS.gene062886:CDS
AGGTGTCTGAAGATTGCAGT+GGG 0.688553 4.1:+31853421 None:intergenic
ACAACAGAAAGGATTTCCTG+AGG 0.693986 4.1:-31854782 MS.gene062886:CDS
AGCTATGGGACTATCGAATG+GGG 0.699329 4.1:-31859281 MS.gene062886:CDS
AAACCCATTTGTAATCTGTG+GGG 0.715195 4.1:-31853204 MS.gene062886:CDS
CGTCCCAATCTATATCACCA+AGG 0.716874 4.1:-31854974 MS.gene062886:CDS
GTACCTCCAGATACAAAGAG+AGG 0.720076 4.1:+31859192 None:intergenic
AAAATCGGTCATGTTCCCTG+CGG 0.740048 4.1:+31855833 None:intergenic
GAAATCATAGTTCAACTCCG+TGG 0.745727 4.1:+31853229 None:intergenic
GTGTTGGAAGGTCATGACCG+GGG 0.753951 4.1:-31856767 MS.gene062886:CDS
AACTGCTGGGAAATTCACTG+AGG 0.758138 4.1:-31853633 MS.gene062886:CDS
TAGGAACATGGATCTCAAGG+GGG 0.765471 4.1:+31853832 None:intergenic
GAGGTGTCTGAAGATTGCAG+TGG 0.771584 4.1:+31853420 None:intergenic
ACGAACAGTCTGATCCAGGG+AGG 0.771806 4.1:+31856904 None:intergenic
ATACTTGCGAGTCTTCACAG+TGG 0.873020 4.1:-31859312 MS.gene062886:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTCTTTAATTTATTTATTTT+TGG + chr4.1:31854845-31854864 None:intergenic 10.0%
!!! TGATTATTATACTTTTTATT+GGG - chr4.1:31855249-31855268 MS.gene062886:CDS 10.0%
!!! TTAATTTATTTATTTTTGGT+AGG + chr4.1:31854841-31854860 None:intergenic 10.0%
!!! TTGATTATTATACTTTTTAT+TGG - chr4.1:31855248-31855267 MS.gene062886:CDS 10.0%
!!! TTTTGAAAAAAATTGATTTT+CGG + chr4.1:31854350-31854369 None:intergenic 10.0%
!! AACAGAGAATAAATTTAATT+AGG + chr4.1:31856417-31856436 None:intergenic 15.0%
!! ACAGAGAATAAATTTAATTA+GGG + chr4.1:31856416-31856435 None:intergenic 15.0%
!! ATTAAATTATTGTTGCATAT+TGG - chr4.1:31855189-31855208 MS.gene062886:CDS 15.0%
!! CAATAATATTAACATTTCAT+CGG + chr4.1:31853795-31853814 None:intergenic 15.0%
!! CTGATAAATGTTAATATAAT+AGG - chr4.1:31853520-31853539 MS.gene062886:CDS 15.0%
!! TTGATGTTCAAATAATATAA+TGG - chr4.1:31854980-31854999 MS.gene062886:CDS 15.0%
!! TTTAAAAAAAGTGATCTTTA+TGG - chr4.1:31854408-31854427 MS.gene062886:CDS 15.0%
!!! AATTTTTTTCAAAAACAAAG+AGG - chr4.1:31854356-31854375 MS.gene062886:CDS 15.0%
!!! GCGATTTATTTATTTTTATA+GGG - chr4.1:31854607-31854626 MS.gene062886:CDS 15.0%
!!! TGCGATTTATTTATTTTTAT+AGG - chr4.1:31854606-31854625 MS.gene062886:CDS 15.0%
!!! TTATCTCTTTTAATAATTGA+AGG - chr4.1:31856230-31856249 MS.gene062886:intron 15.0%
!!! TTTTGTAATATATAAGGATA+AGG - chr4.1:31854017-31854036 MS.gene062886:CDS 15.0%
!!! TTTTTCTATAAAAATGACAA+AGG + chr4.1:31854221-31854240 None:intergenic 15.0%
!! AATTTGAAAAGGTTCTTATA+AGG + chr4.1:31856141-31856160 None:intergenic 20.0%
!! AGATAATCTTTCAAAATTCT+TGG + chr4.1:31857853-31857872 None:intergenic 20.0%
!! ATATACCTTGTAATTTGAAA+AGG + chr4.1:31856152-31856171 None:intergenic 20.0%
!! ATTTGAAAAGGTTCTTATAA+GGG + chr4.1:31856140-31856159 None:intergenic 20.0%
!! CGATGAAATGTTAATATTAT+TGG - chr4.1:31853793-31853812 MS.gene062886:CDS 20.0%
!! TAATAATTGAAGGATAACTT+TGG - chr4.1:31856240-31856259 MS.gene062886:intron 20.0%
!! TAATTCTCTCCATTTAATTA+TGG + chr4.1:31856197-31856216 None:intergenic 20.0%
!! TGTTAATATAATAGGTTTAG+AGG - chr4.1:31853528-31853547 MS.gene062886:CDS 20.0%
!!! CAAAAGTATCCATAATTAAA+TGG - chr4.1:31856185-31856204 MS.gene062886:intron 20.0%
!!! TAGGATTTCTCTTTAATTTA+TGG + chr4.1:31854822-31854841 None:intergenic 20.0%
!!! TCTGCATTTTGTAATATATA+AGG - chr4.1:31854011-31854030 MS.gene062886:CDS 20.0%
!!! TTGTGTTTTGATTTGTTTTT+CGG - chr4.1:31853307-31853326 MS.gene062886:CDS 20.0%
!!! TTTTCTTAATTATTGTGCAT+TGG - chr4.1:31856303-31856322 MS.gene062886:intron 20.0%
! AAGGGACAAAAAATTTACAA+GGG + chr4.1:31856122-31856141 None:intergenic 25.0%
! AAGTTGAATATGTTGTTCTT+TGG - chr4.1:31854894-31854913 MS.gene062886:CDS 25.0%
! AATTATTGTTGCATATTGGA+AGG - chr4.1:31855193-31855212 MS.gene062886:CDS 25.0%
! ATAAAGAATTCACAACTTTG+TGG - chr4.1:31857603-31857622 MS.gene062886:intron 25.0%
! ATTTAATTAGGGAATAGAGA+AGG + chr4.1:31856405-31856424 None:intergenic 25.0%
! CATACCAAAAAAAGTTTAAG+TGG + chr4.1:31853732-31853751 None:intergenic 25.0%
! CTAAACTGATGAAATGTTAT+AGG - chr4.1:31853949-31853968 MS.gene062886:CDS 25.0%
! GAGATAGAAAATTCCTAAAA+AGG + chr4.1:31853924-31853943 None:intergenic 25.0%
! GTATGAATATTTGTAACAAC+TGG + chr4.1:31855949-31855968 None:intergenic 25.0%
! TAAGGGACAAAAAATTTACA+AGG + chr4.1:31856123-31856142 None:intergenic 25.0%
! TATCTACATTTCATCAGTTT+AGG + chr4.1:31853872-31853891 None:intergenic 25.0%
! TCTAATTGAGACAATTTGTA+AGG + chr4.1:31858746-31858765 None:intergenic 25.0%
! TCTTTATCATGTTCATAACA+TGG + chr4.1:31857590-31857609 None:intergenic 25.0%
! TGAAATGTAGATATGTTTAC+AGG - chr4.1:31853879-31853898 MS.gene062886:CDS 25.0%
! TTTCACAATGCCTTATATAT+GGG - chr4.1:31857957-31857976 MS.gene062886:intron 25.0%
!! AAGAACCTTTTCAAATTACA+AGG - chr4.1:31856144-31856163 MS.gene062886:intron 25.0%
!! ATGAAATGTTATAGGTTTTG+AGG - chr4.1:31853957-31853976 MS.gene062886:CDS 25.0%
!! ATGACCTTTTAACAAATCAT+TGG - chr4.1:31854692-31854711 MS.gene062886:CDS 25.0%
!! CAAAATTAGTAGCTTTACAT+TGG - chr4.1:31855046-31855065 MS.gene062886:CDS 25.0%
!! CAATGTAAAGCTACTAATTT+TGG + chr4.1:31855048-31855067 None:intergenic 25.0%
!! GATGTAATTTCTACCTTTTT+AGG - chr4.1:31853908-31853927 MS.gene062886:CDS 25.0%
!! TTGCAAAATTTGAGTTACAT+TGG - chr4.1:31853392-31853411 MS.gene062886:CDS 25.0%
!!! AAATTGATTTTCGGATAGAT+AGG + chr4.1:31854341-31854360 None:intergenic 25.0%
!!! AGAAAAATTGAGTTGAAAAG+CGG + chr4.1:31855109-31855128 None:intergenic 25.0%
!!! AGAACCAATGATTTGTTAAA+AGG + chr4.1:31854699-31854718 None:intergenic 25.0%
!!! ATTATACTTTTTATTGGGAC+AGG - chr4.1:31855254-31855273 MS.gene062886:CDS 25.0%
!!! GTTTAGGTTGTTAATAGAAA+AGG + chr4.1:31853856-31853875 None:intergenic 25.0%
!!! TAATTATTGTGCATTGGTTA+AGG - chr4.1:31856309-31856328 MS.gene062886:intron 25.0%
!!! TTATACTTTTTATTGGGACA+GGG - chr4.1:31855255-31855274 MS.gene062886:CDS 25.0%
!!! TTTCTGTGTGTATTTTTGAA+AGG - chr4.1:31854917-31854936 MS.gene062886:CDS 25.0%
!!! TTTTAACAAATCATTGGTTC+TGG - chr4.1:31854698-31854717 MS.gene062886:CDS 25.0%
AAGATGTAAAAGTGAAGAGA+TGG + chr4.1:31853650-31853669 None:intergenic 30.0%
AATCGCAAAATATCATCTGA+AGG + chr4.1:31855590-31855609 None:intergenic 30.0%
AGACACAAGTACTTACTATT+CGG - chr4.1:31856787-31856806 MS.gene062886:CDS 30.0%
AGACTACATACTTGATGAAA+GGG + chr4.1:31857224-31857243 None:intergenic 30.0%
AGCATAAAATATAGCATCAG+TGG + chr4.1:31857115-31857134 None:intergenic 30.0%
AGGGACAAAAAATTTACAAG+GGG + chr4.1:31856121-31856140 None:intergenic 30.0%
ATAATAGGTTTAGAGGAACT+AGG - chr4.1:31853535-31853554 MS.gene062886:CDS 30.0%
ATGAAGCACACATAACATAA+TGG + chr4.1:31855475-31855494 None:intergenic 30.0%
ATGATTACAAGATTAAGGTC+TGG - chr4.1:31855279-31855298 MS.gene062886:CDS 30.0%
ATTCATACAACAGTGTTTAG+AGG - chr4.1:31855961-31855980 MS.gene062886:CDS 30.0%
ATTCATAGAAACGCAAAAAG+CGG + chr4.1:31856752-31856771 None:intergenic 30.0%
ATTGCTTATCTACAACAGAA+AGG - chr4.1:31857636-31857655 MS.gene062886:intron 30.0%
CTAACTCATCCTTATAAAAC+CGG - chr4.1:31854303-31854322 MS.gene062886:CDS 30.0%
GAGTTGAAAGAATCCAAAAT+CGG + chr4.1:31856614-31856633 None:intergenic 30.0%
GATGTGATTTCTATCTTTCT+AGG - chr4.1:31853830-31853849 MS.gene062886:CDS 30.0%
GTTTCACAATGCCTTATATA+TGG - chr4.1:31857956-31857975 MS.gene062886:intron 30.0%
TAAGGTCTTACATATAAGGA+CGG - chr4.1:31856327-31856346 MS.gene062886:intron 30.0%
TATAGGGAATAAGATCTGTT+TGG - chr4.1:31854623-31854642 MS.gene062886:CDS 30.0%
TCGAATATCACCCATATATA+AGG + chr4.1:31857970-31857989 None:intergenic 30.0%
TGATTGTGTGTATATTAGTG+TGG - chr4.1:31854737-31854756 MS.gene062886:intron 30.0%
TGGTTAAGGTCTTACATATA+AGG - chr4.1:31856323-31856342 MS.gene062886:intron 30.0%
TTATATTTGATCTTCAGCAG+AGG - chr4.1:31857175-31857194 MS.gene062886:intron 30.0%
TTCTCTCATCTTTCACAAAA+TGG + chr4.1:31857680-31857699 None:intergenic 30.0%
TTGGTGTGATTTAAATGCTT+TGG - chr4.1:31854642-31854661 MS.gene062886:CDS 30.0%
TTGTGAAAGATGAGAGAATT+CGG - chr4.1:31857682-31857701 MS.gene062886:intron 30.0%
! ACTGATGCTATATTTTATGC+TGG - chr4.1:31857114-31857133 MS.gene062886:CDS 30.0%
! AGAAGAATTGCATTTTCAGT+AGG + chr4.1:31856865-31856884 None:intergenic 30.0%
! TGATTTAAATGCTTTGGATC+TGG - chr4.1:31854648-31854667 MS.gene062886:CDS 30.0%
! TTTTCAGATATTCGTGATTC+AGG + chr4.1:31855807-31855826 None:intergenic 30.0%
!! AATTAAGGACAGTTTTGGTA+GGG - chr4.1:31856942-31856961 MS.gene062886:CDS 30.0%
!! AGGATAAAAGTATTCGAGTA+TGG - chr4.1:31856541-31856560 MS.gene062886:intron 30.0%
!! CTCTAAAATGAAAAGCTACT+AGG - chr4.1:31854252-31854271 MS.gene062886:CDS 30.0%
!! GGATAAAAGTATTCGAGTAT+GGG - chr4.1:31856542-31856561 MS.gene062886:intron 30.0%
!! TATACTTTTTATTGGGACAG+GGG - chr4.1:31855256-31855275 MS.gene062886:CDS 30.0%
!! TATATAAGGCATTGTGAAAC+TGG + chr4.1:31857956-31857975 None:intergenic 30.0%
!!! ACCTGTATATCTGTTTTAAC+TGG - chr4.1:31855443-31855462 MS.gene062886:CDS 30.0%
!!! CCTGTATATCTGTTTTAACT+GGG - chr4.1:31855444-31855463 MS.gene062886:CDS 30.0%
!!! CGTTCTTCAGGTTTTTTAAA+AGG + chr4.1:31857062-31857081 None:intergenic 30.0%
!!! GGATCCACTTAAACTTTTTT+TGG - chr4.1:31853725-31853744 MS.gene062886:CDS 30.0%
!!! TCAGGTTTTTTAAAAGGACT+TGG + chr4.1:31857056-31857075 None:intergenic 30.0%
!!! TTTTAAGACAAGCCAAATGA+GGG + chr4.1:31853573-31853592 None:intergenic 30.0%
AAAAATACCATTGTCATCCC+AGG + chr4.1:31857364-31857383 None:intergenic 35.0%
AAACCCATTTGTAATCTGTG+GGG - chr4.1:31859225-31859244 MS.gene062886:CDS 35.0%
AATATAGCATCAGTGGCAAT+AGG + chr4.1:31857108-31857127 None:intergenic 35.0%
AATTTCATCATGAGAACCCA+TGG - chr4.1:31855366-31855385 MS.gene062886:CDS 35.0%
ACGAAAAGTAACAGAGTGAA+GGG - chr4.1:31853066-31853085 MS.gene062886:CDS 35.0%
AGAAACCCATTTGTAATCTG+TGG - chr4.1:31859223-31859242 MS.gene062886:CDS 35.0%
AGAATCATTACTAACAGCGA+AGG + chr4.1:31856712-31856731 None:intergenic 35.0%
AGAATGAAGATCTAGGAACA+TGG + chr4.1:31858612-31858631 None:intergenic 35.0%
AGAGTAATTATGAAGCTAGC+GGG + chr4.1:31853262-31853281 None:intergenic 35.0%
AGCTTTCCTTGTTGAAGAAA+AGG - chr4.1:31857559-31857578 MS.gene062886:intron 35.0%
AGGGATTGTATGGAGAATAT+TGG + chr4.1:31858837-31858856 None:intergenic 35.0%
AGGGGATGATTACAAGATTA+AGG - chr4.1:31855274-31855293 MS.gene062886:CDS 35.0%
AGGTGTACGAAACTAAGAAT+GGG - chr4.1:31854554-31854573 MS.gene062886:CDS 35.0%
ATAGTATCCTTTCAAAACCC+TGG + chr4.1:31854152-31854171 None:intergenic 35.0%
ATATAGCATCAGTGGCAATA+GGG + chr4.1:31857107-31857126 None:intergenic 35.0%
ATCAAATACTGCCTTCCAAA+TGG - chr4.1:31857405-31857424 MS.gene062886:intron 35.0%
ATCCAAGGATAGCACAATTA+AGG - chr4.1:31856927-31856946 MS.gene062886:CDS 35.0%
ATCTATATCACCAAGGTTGT+TGG - chr4.1:31857462-31857481 MS.gene062886:intron 35.0%
ATGAGAGAATTCGGTTCAAT+TGG - chr4.1:31857691-31857710 MS.gene062886:intron 35.0%
ATGATCTCTGAATCCATATC+TGG + chr4.1:31858493-31858512 None:intergenic 35.0%
ATGTATGTATGTATCGCTAG+TGG - chr4.1:31853703-31853722 MS.gene062886:CDS 35.0%
CAATTGATGAGAAAGATCAC+TGG - chr4.1:31857760-31857779 MS.gene062886:intron 35.0%
CAGACTACATACTTGATGAA+AGG + chr4.1:31857225-31857244 None:intergenic 35.0%
CAGAGTAATTATGAAGCTAG+CGG + chr4.1:31853263-31853282 None:intergenic 35.0%
CAGTGGGATAATAAAAACAC+TGG - chr4.1:31857431-31857450 MS.gene062886:intron 35.0%
CATACCACGAAAAGTTTAAG+CGG + chr4.1:31853449-31853468 None:intergenic 35.0%
CATCATTGTGTCAAATTCTG+AGG - chr4.1:31856521-31856540 MS.gene062886:intron 35.0%
CATTACCAGTGATGAGATAT+AGG + chr4.1:31857878-31857897 None:intergenic 35.0%
CCCAGTTAAAACAGATATAC+AGG + chr4.1:31855447-31855466 None:intergenic 35.0%
CTATTAAAGTTCAGCTCACT+GGG - chr4.1:31855849-31855868 MS.gene062886:CDS 35.0%
CTTTCATCAAGTATGTAGTC+TGG - chr4.1:31857223-31857242 MS.gene062886:intron 35.0%
GAAACCCATTTGTAATCTGT+GGG - chr4.1:31859224-31859243 MS.gene062886:CDS 35.0%
GAAGTCAAGAATGATGTCAT+GGG - chr4.1:31857930-31857949 MS.gene062886:intron 35.0%
GACTACATACTTGATGAAAG+GGG + chr4.1:31857223-31857242 None:intergenic 35.0%
GATATACTCAGTAGCATCAA+TGG + chr4.1:31857535-31857554 None:intergenic 35.0%
GATATGCAAGAACCAAAGAA+AGG - chr4.1:31856967-31856986 MS.gene062886:CDS 35.0%
GCACTGTACGAATATAATCA+AGG + chr4.1:31855346-31855365 None:intergenic 35.0%
GCAGCGTAAAGTAAATAACA+AGG + chr4.1:31855785-31855804 None:intergenic 35.0%
GGGACAAAAAATTTACAAGG+GGG + chr4.1:31856120-31856139 None:intergenic 35.0%
GTTAAGATCTTGGAGAATGT+GGG - chr4.1:31857996-31858015 MS.gene062886:intron 35.0%
GTTATAAGTCAACAACTGCT+GGG - chr4.1:31858783-31858802 MS.gene062886:intron 35.0%
GTTGTTAAGTATGTGTTGGA+AGG - chr4.1:31855650-31855669 MS.gene062886:intron 35.0%
TAGTATCCTTTCAAAACCCT+GGG + chr4.1:31854151-31854170 None:intergenic 35.0%
TCATCCTGAAATGAATCTGT+TGG - chr4.1:31856632-31856651 MS.gene062886:intron 35.0%
TCTATTAAAGTTCAGCTCAC+TGG - chr4.1:31855848-31855867 MS.gene062886:CDS 35.0%
TCTTTCCTATATCTCATCAC+TGG - chr4.1:31857870-31857889 MS.gene062886:intron 35.0%
TGAAGTCAAGAATGATGTCA+TGG - chr4.1:31857929-31857948 MS.gene062886:intron 35.0%
TGCAGTTGTTAAGTATGTGT+TGG - chr4.1:31855646-31855665 MS.gene062886:CDS 35.0%
TGTATGTATGTATCGCTAGT+GGG - chr4.1:31853704-31853723 MS.gene062886:CDS 35.0%
TGTTAAGATCTTGGAGAATG+TGG - chr4.1:31857995-31858014 MS.gene062886:intron 35.0%
TTAGATGAAAAGCTCAAAGC+TGG - chr4.1:31858761-31858780 MS.gene062886:intron 35.0%
TTCAATTGGCTATAGAGAGT+GGG - chr4.1:31857705-31857724 MS.gene062886:intron 35.0%
TTCATCGAATCGATCAATCA+AGG + chr4.1:31853175-31853194 None:intergenic 35.0%
TTGACTCAACGACAATCAAA+GGG + chr4.1:31858856-31858875 None:intergenic 35.0%
! ACAAAACGGGAAGTACAATA+TGG + chr4.1:31859295-31859314 None:intergenic 35.0%
! ACAACCTTGGTGATATAGAT+TGG + chr4.1:31857462-31857481 None:intergenic 35.0%
! AGCACAATTAAGGACAGTTT+TGG - chr4.1:31856937-31856956 MS.gene062886:CDS 35.0%
! ATGAACACTGATCTTTTTGG+TGG - chr4.1:31855617-31855636 MS.gene062886:CDS 35.0%
! CAAAACGGGAAGTACAATAT+GGG + chr4.1:31859294-31859313 None:intergenic 35.0%
! CAACCTTGGTGATATAGATT+GGG + chr4.1:31857461-31857480 None:intergenic 35.0%
! CAGATGAACACTGATCTTTT+TGG - chr4.1:31855614-31855633 MS.gene062886:CDS 35.0%
! CATAGTCAAAGAGTATGTTC+TGG - chr4.1:31858910-31858929 MS.gene062886:intron 35.0%
! CTTAAACTTTTCGTGGTATG+TGG - chr4.1:31853449-31853468 MS.gene062886:CDS 35.0%
! GCTATATTTTATGCTGGAAC+AGG - chr4.1:31857120-31857139 MS.gene062886:CDS 35.0%
! GTCATACCTTTTCTTCAACA+AGG + chr4.1:31857568-31857587 None:intergenic 35.0%
! GTTACTGCAATTTTGGATGA+TGG - chr4.1:31858326-31858345 MS.gene062886:intron 35.0%
! TCTGGAACTATAAGATGCAT+AGG - chr4.1:31855297-31855316 MS.gene062886:CDS 35.0%
! TGGAGATGTTACTGCAATTT+TGG - chr4.1:31858319-31858338 MS.gene062886:intron 35.0%
! TTCTCTGTTTTCAGACACTA+AGG - chr4.1:31856428-31856447 MS.gene062886:intron 35.0%
! TTTTAACAAGCTCGTTCTTC+AGG + chr4.1:31857074-31857093 None:intergenic 35.0%
!! ATTAAGGACAGTTTTGGTAG+GGG - chr4.1:31856943-31856962 MS.gene062886:CDS 35.0%
!! CAATTAAGGACAGTTTTGGT+AGG - chr4.1:31856941-31856960 MS.gene062886:CDS 35.0%
!! CGGTTTTATAAGGATGAGTT+AGG + chr4.1:31854305-31854324 None:intergenic 35.0%
!! CTTGATAAGCCGGTTTTATA+AGG + chr4.1:31854315-31854334 None:intergenic 35.0%
!! GATGTTGATGGATTGGAAAA+TGG - chr4.1:31858299-31858318 MS.gene062886:intron 35.0%
!! GTTTAACTTGTCAGTTTGTG+TGG - chr4.1:31854770-31854789 MS.gene062886:CDS 35.0%
!! TATTGGTTCTCTCAAAAGGA+AGG - chr4.1:31855556-31855575 MS.gene062886:CDS 35.0%
!!! AGGGTTTTGAAAGGATACTA+TGG - chr4.1:31854151-31854170 MS.gene062886:CDS 35.0%
!!! GGGTTTTGAAAGGATACTAT+GGG - chr4.1:31854152-31854171 MS.gene062886:CDS 35.0%
!!! GTTTTAAGACAAGCCAAATG+AGG + chr4.1:31853574-31853593 None:intergenic 35.0%
AAAACCAAGCTAAGACAGCA+AGG - chr4.1:31859140-31859159 MS.gene062886:intron 40.0%
AAGGAATATGACTGATGCCA+CGG - chr4.1:31859183-31859202 MS.gene062886:intron 40.0%
AATTCTTCTCTGCTCTGATG+TGG - chr4.1:31856876-31856895 MS.gene062886:CDS 40.0%
ACAACAGAAAGGATTTCCTG+AGG - chr4.1:31857647-31857666 MS.gene062886:intron 40.0%
AGATAGGACTCTTGATAAGC+CGG + chr4.1:31854325-31854344 None:intergenic 40.0%
AGGTGCTTATTCACTCTTCT+AGG - chr4.1:31855317-31855336 MS.gene062886:CDS 40.0%
AGTTACAAGAATTAGCGTCC+TGG + chr4.1:31854105-31854124 None:intergenic 40.0%
ATATCACTGCATCAACCCAT+GGG - chr4.1:31858036-31858055 MS.gene062886:intron 40.0%
ATCATTACTAACAGCGAAGG+CGG + chr4.1:31856709-31856728 None:intergenic 40.0%
ATCTAGGAACATGGATCTCA+AGG + chr4.1:31858603-31858622 None:intergenic 40.0%
ATGACCGTCAAGTGAAACTT+TGG - chr4.1:31855738-31855757 MS.gene062886:CDS 40.0%
ATGATCAAACCATTCGCATC+TGG - chr4.1:31855405-31855424 MS.gene062886:CDS 40.0%
ATTATCCCACTGTCTCCATT+TGG + chr4.1:31857423-31857442 None:intergenic 40.0%
CAAAAGCTTCTGTCAGTACA+CGG - chr4.1:31858426-31858445 MS.gene062886:intron 40.0%
CAAGAACCAAAGAAAGGTCT+TGG - chr4.1:31856973-31856992 MS.gene062886:CDS 40.0%
CGACAATCAAAGGGATTGTA+TGG + chr4.1:31858847-31858866 None:intergenic 40.0%
CGCAAAATATCATCTGAAGG+AGG + chr4.1:31855587-31855606 None:intergenic 40.0%
CTGCAATGAGATTACTGAAC+AGG - chr4.1:31858552-31858571 MS.gene062886:intron 40.0%
CTGGGACAAATAAGGAACAA+AGG + chr4.1:31854086-31854105 None:intergenic 40.0%
CTTGACTCAACGACAATCAA+AGG + chr4.1:31858857-31858876 None:intergenic 40.0%
CTTTGATTGTCGTTGAGTCA+AGG - chr4.1:31858855-31858874 MS.gene062886:intron 40.0%
GAAATCATAGTTCAACTCCG+TGG + chr4.1:31859203-31859222 None:intergenic 40.0%
GAATTGTGTGTGTGATACCT+TGG - chr4.1:31853979-31853998 MS.gene062886:CDS 40.0%
GACGAAAAGTAACAGAGTGA+AGG - chr4.1:31853065-31853084 MS.gene062886:CDS 40.0%
GAGGTGTACGAAACTAAGAA+TGG - chr4.1:31854553-31854572 MS.gene062886:CDS 40.0%
GAGTCTTAGGACTTTGATTC+AGG + chr4.1:31856831-31856850 None:intergenic 40.0%
GATGCAGTGATATAAGCAAG+AGG + chr4.1:31858029-31858048 None:intergenic 40.0%
GATGGTATTTCCAACAACCT+TGG + chr4.1:31857475-31857494 None:intergenic 40.0%
GATTCAGGCTTAAAGAACCA+GGG + chr4.1:31856816-31856835 None:intergenic 40.0%
GCTGAAAAGAAGGGAAATGA+AGG - chr4.1:31858946-31858965 MS.gene062886:intron 40.0%
GGAAATACCATCTTCTGCTT+GGG - chr4.1:31857483-31857502 MS.gene062886:intron 40.0%
GGTTATAAGTCAACAACTGC+TGG - chr4.1:31858782-31858801 MS.gene062886:intron 40.0%
GTCCTTAATTGTGCTATCCT+TGG + chr4.1:31856932-31856951 None:intergenic 40.0%
GTGTGTGAACTTTCAGTTGT+CGG - chr4.1:31859343-31859362 MS.gene062886:CDS 40.0%
GTTACAAGAATTAGCGTCCT+GGG + chr4.1:31854104-31854123 None:intergenic 40.0%
GTTCAATTGGCTATAGAGAG+TGG - chr4.1:31857704-31857723 MS.gene062886:intron 40.0%
TACAGCATCAAGACAATGCA+TGG + chr4.1:31855926-31855945 None:intergenic 40.0%
TAGTGGAGTATGCATATCAG+AGG - chr4.1:31857826-31857845 MS.gene062886:intron 40.0%
TATATCACTGCATCAACCCA+TGG - chr4.1:31858035-31858054 MS.gene062886:intron 40.0%
TATGCAAGATCTAAACAGCG+AGG + chr4.1:31853495-31853514 None:intergenic 40.0%
TCCTCCAAAGTTTCACTTGA+CGG + chr4.1:31855745-31855764 None:intergenic 40.0%
TCCTTCTGTCCACGATAAAT+GGG + chr4.1:31859262-31859281 None:intergenic 40.0%
TCTAGGAACATGGATCTCAA+GGG + chr4.1:31858602-31858621 None:intergenic 40.0%
TCTCAACCTCTCTTTGTATC+TGG - chr4.1:31853231-31853250 MS.gene062886:CDS 40.0%
TCTTAGTTTCGTACACCTCA+CGG + chr4.1:31854552-31854571 None:intergenic 40.0%
TGACACAATGATGTCCTGTT+TGG + chr4.1:31856514-31856533 None:intergenic 40.0%
TGAGTTGTACTGCATATCCA+AGG - chr4.1:31856912-31856931 MS.gene062886:CDS 40.0%
TGATATAAGCAAGAGGCAAG+TGG + chr4.1:31858022-31858041 None:intergenic 40.0%
TGATTCAGGCTTAAAGAACC+AGG + chr4.1:31856817-31856836 None:intergenic 40.0%
TGCTTCATTCCATCCAAAAG+AGG - chr4.1:31855487-31855506 MS.gene062886:CDS 40.0%
TGGAAATACCATCTTCTGCT+TGG - chr4.1:31857482-31857501 MS.gene062886:intron 40.0%
TGGCAAAATTTGCGTTGCAT+TGG - chr4.1:31853676-31853695 MS.gene062886:CDS 40.0%
TGTGTGAACTTTCAGTTGTC+GGG - chr4.1:31859344-31859363 MS.gene062886:CDS 40.0%
TGTTATGTTCCATGCCAAAC+AGG - chr4.1:31856497-31856516 MS.gene062886:intron 40.0%
TGTTGCATATTGGAAGGAGA+GGG - chr4.1:31855199-31855218 MS.gene062886:CDS 40.0%
TTGCCCCACAGATTACAAAT+GGG + chr4.1:31859231-31859250 None:intergenic 40.0%
TTGTTGCATATTGGAAGGAG+AGG - chr4.1:31855198-31855217 MS.gene062886:CDS 40.0%
TTTGTTCCTTATCTGTCCCA+GGG - chr4.1:31854132-31854151 MS.gene062886:CDS 40.0%
! AAACCATTCGCATCTGGAAT+TGG - chr4.1:31855411-31855430 MS.gene062886:CDS 40.0%
! ACTGTTCGTGTTTGGGATAT+TGG - chr4.1:31855539-31855558 MS.gene062886:CDS 40.0%
! AGCTTTTCCCTGTTGAAACT+GGG - chr4.1:31854278-31854297 MS.gene062886:CDS 40.0%
! ATGCAACGCAAATTTTGCCA+TGG + chr4.1:31853676-31853695 None:intergenic 40.0%
! CACTTTTACATCTTCACCCA+TGG - chr4.1:31853656-31853675 MS.gene062886:CDS 40.0%
! CGACAATATCCTCTTTTGGA+TGG + chr4.1:31855499-31855518 None:intergenic 40.0%
! CTTTGTTCCTTATTTGTCCC+AGG - chr4.1:31854084-31854103 MS.gene062886:CDS 40.0%
! GACAATTTGTAAGGAAGTGC+CGG + chr4.1:31858737-31858756 None:intergenic 40.0%
! GACACGACAATATCCTCTTT+TGG + chr4.1:31855503-31855522 None:intergenic 40.0%
! GTGAAACTTTGGAGGATGAA+TGG - chr4.1:31855749-31855768 MS.gene062886:CDS 40.0%
! GTTTTCAGACACTAAGGCAT+GGG - chr4.1:31856434-31856453 MS.gene062886:intron 40.0%
! TAACTTGTCAGTTTGTGTGG+AGG - chr4.1:31854773-31854792 MS.gene062886:CDS 40.0%
! TACACGGTCTTCAGTTTTTG+TGG - chr4.1:31858442-31858461 MS.gene062886:intron 40.0%
! TAGCTTTTCCCTGTTGAAAC+TGG - chr4.1:31854277-31854296 MS.gene062886:CDS 40.0%
! TGATCCGCTTAAACTTTTCG+TGG - chr4.1:31853442-31853461 MS.gene062886:CDS 40.0%
! TGCAACGCAAATTTTGCCAT+GGG + chr4.1:31853675-31853694 None:intergenic 40.0%
! TGCATTTTCAGTAGGACTGT+AGG + chr4.1:31856857-31856876 None:intergenic 40.0%
! TGTTTTCAGACACTAAGGCA+TGG - chr4.1:31856433-31856452 MS.gene062886:intron 40.0%
! TTTTGCTTCCTTATCCAAGC+CGG - chr4.1:31855131-31855150 MS.gene062886:CDS 40.0%
!! AAAGATCACTGGTACCGATT+GGG - chr4.1:31857771-31857790 MS.gene062886:intron 40.0%
!! GATCGATTCGATGAACATGA+TGG - chr4.1:31853180-31853199 MS.gene062886:CDS 40.0%
!! GGGATATTGGTTCTCTCAAA+AGG - chr4.1:31855552-31855571 MS.gene062886:CDS 40.0%
!! TGTACCACTTGCTGTTGAAA+GGG - chr4.1:31858673-31858692 MS.gene062886:intron 40.0%
!! TTAGCTTGGTTTTCGATGCT+AGG + chr4.1:31859133-31859152 None:intergenic 40.0%
!! TTGGTTTTCGATGCTAGGAT+TGG + chr4.1:31859128-31859147 None:intergenic 40.0%
!! TTGTACCACTTGCTGTTGAA+AGG - chr4.1:31858672-31858691 MS.gene062886:intron 40.0%
!!! AATTTTGGATGATGGAGAGG+CGG - chr4.1:31858334-31858353 MS.gene062886:intron 40.0%
!!! GTTGCTGCTTTTTTCAAGCA+CGG + chr4.1:31857034-31857053 None:intergenic 40.0%
!!! TAGCTTTGTTTTTCCCATCC+CGG + chr4.1:31857509-31857528 None:intergenic 40.0%
!!! TGCAATTTTGGATGATGGAG+AGG - chr4.1:31858331-31858350 MS.gene062886:intron 40.0%
AAAATCGGTCATGTTCCCTG+CGG + chr4.1:31856599-31856618 None:intergenic 45.0%
AAACACGAACAGTCTGATCC+AGG + chr4.1:31855532-31855551 None:intergenic 45.0%
AAATGCTAAACAATGCCCCC+CGG + chr4.1:31855153-31855172 None:intergenic 45.0%
AACACGAACAGTCTGATCCA+GGG + chr4.1:31855531-31855550 None:intergenic 45.0%
AACTGCTGGGAAATTCACTG+AGG - chr4.1:31858796-31858815 MS.gene062886:intron 45.0%
AAGACAAGCCAAATGAGGGA+GGG + chr4.1:31853569-31853588 None:intergenic 45.0%
AATGCAGACAAGCCAATCCA+AGG + chr4.1:31853999-31854018 None:intergenic 45.0%
ACAAAATGGAGAGCAACCTC+AGG + chr4.1:31857666-31857685 None:intergenic 45.0%
ACAAGGCAATGCTGGTATAG+TGG - chr4.1:31857809-31857828 MS.gene062886:intron 45.0%
ACACTGCCTCTTATTGTCTC+AGG - chr4.1:31855710-31855729 MS.gene062886:intron 45.0%
ACCGTCAAGTGAAACTTTGG+AGG - chr4.1:31855741-31855760 MS.gene062886:CDS 45.0%
ACCTATGTGCCCATTTATCG+TGG - chr4.1:31859250-31859269 MS.gene062886:CDS 45.0%
AGATTACTGAACAGGCAGCT+TGG - chr4.1:31858560-31858579 MS.gene062886:intron 45.0%
AGCTATGGGACTATCGAATG+GGG - chr4.1:31853148-31853167 MS.gene062886:CDS 45.0%
AGGTGTCTGAAGATTGCAGT+GGG + chr4.1:31859011-31859030 None:intergenic 45.0%
AGTTTGTGTGGAGGAGATCT+TGG - chr4.1:31854782-31854801 MS.gene062886:CDS 45.0%
ATACTTGCGAGTCTTCACAG+TGG - chr4.1:31853117-31853136 MS.gene062886:CDS 45.0%
ATCTTCAGACACCTCACTTG+AGG - chr4.1:31859017-31859036 MS.gene062886:intron 45.0%
ATGATGCTCCTGAAGGTGAT+TGG - chr4.1:31858258-31858277 MS.gene062886:intron 45.0%
ATGCGAGGCATATTTGATGG+TGG - chr4.1:31858194-31858213 MS.gene062886:intron 45.0%
ATGTGTTGGAAGGTCATGAC+CGG - chr4.1:31855660-31855679 MS.gene062886:intron 45.0%
CAACCTCTCTTTGTATCTGG+AGG - chr4.1:31853234-31853253 MS.gene062886:CDS 45.0%
CAATCACCACAACACAGTAC+AGG + chr4.1:31858158-31858177 None:intergenic 45.0%
CAATGATGTCCTGTTTGGCA+TGG + chr4.1:31856509-31856528 None:intergenic 45.0%
CACTAGCACTCACAATCCAT+GGG + chr4.1:31855385-31855404 None:intergenic 45.0%
CAGCTATGGGACTATCGAAT+GGG - chr4.1:31853147-31853166 MS.gene062886:CDS 45.0%
CGTCCCAATCTATATCACCA+AGG - chr4.1:31857455-31857474 MS.gene062886:intron 45.0%
CTAGGAACATGGATCTCAAG+GGG + chr4.1:31858601-31858620 None:intergenic 45.0%
CTGGGACAGATAAGGAACAA+AGG + chr4.1:31854133-31854152 None:intergenic 45.0%
CTGTACTGTGTTGTGGTGAT+TGG - chr4.1:31858156-31858175 MS.gene062886:intron 45.0%
CTTCAGCAGAGGATTGTTCT+TGG - chr4.1:31857186-31857205 MS.gene062886:intron 45.0%
CTTTGTTCCTTATCTGTCCC+AGG - chr4.1:31854131-31854150 MS.gene062886:CDS 45.0%
GAAACGCAAAAAGCGGTCTT+TGG + chr4.1:31856745-31856764 None:intergenic 45.0%
GAAATGAATCTGTTGGCAGC+TGG - chr4.1:31856639-31856658 MS.gene062886:intron 45.0%
GAACCAAAGAAAGGTCTTGG+AGG - chr4.1:31856976-31856995 MS.gene062886:CDS 45.0%
GAAGAGCTTCAACTCCCAAT+CGG + chr4.1:31857788-31857807 None:intergenic 45.0%
GACTGGCAGAATGAAGATCT+AGG + chr4.1:31858619-31858638 None:intergenic 45.0%
GAGACAATAAGAGGCAGTGT+AGG + chr4.1:31855710-31855729 None:intergenic 45.0%
GAGGGAAGTGGATGATGTAA+AGG - chr4.1:31858877-31858896 MS.gene062886:intron 45.0%
GAGTATGGGATGCAACAAAG+AGG - chr4.1:31856556-31856575 MS.gene062886:intron 45.0%
GATCCTCCAAGACCTTTCTT+TGG + chr4.1:31856982-31857001 None:intergenic 45.0%
GATTACTGAACAGGCAGCTT+GGG - chr4.1:31858561-31858580 MS.gene062886:intron 45.0%
GATTGTCGTTGAGTCAAGGA+GGG - chr4.1:31858859-31858878 MS.gene062886:intron 45.0%
GCAGATGGAGCTGAAAAGAA+GGG - chr4.1:31858937-31858956 MS.gene062886:intron 45.0%
GCTGAAGAAGGTGATGAAGA+GGG - chr4.1:31858356-31858375 MS.gene062886:intron 45.0%
GCTGCCAACAGATTCATTTC+AGG + chr4.1:31856639-31856658 None:intergenic 45.0%
GGAAATTCACTGAGGCTCTT+CGG - chr4.1:31858804-31858823 MS.gene062886:intron 45.0%
GGACTGTAGGAAAGAGTCTT+AGG + chr4.1:31856844-31856863 None:intergenic 45.0%
GGATCAGACTGTTCGTGTTT+GGG - chr4.1:31855532-31855551 MS.gene062886:CDS 45.0%
GGTCTTACATATAAGGACGG+AGG - chr4.1:31856330-31856349 MS.gene062886:intron 45.0%
GTACCTCCAGATACAAAGAG+AGG + chr4.1:31853240-31853259 None:intergenic 45.0%
GTCATGCGAGGCATATTTGA+TGG - chr4.1:31858191-31858210 MS.gene062886:intron 45.0%
GTCCTTCTGTCCACGATAAA+TGG + chr4.1:31859263-31859282 None:intergenic 45.0%
GTGTGAACTTTCAGTTGTCG+GGG - chr4.1:31859345-31859364 MS.gene062886:CDS 45.0%
GTGTGTGTGATACCTTGGAT+TGG - chr4.1:31853984-31854003 MS.gene062886:CDS 45.0%
GTTGCCCCACAGATTACAAA+TGG + chr4.1:31859232-31859251 None:intergenic 45.0%
TAAGACAAGCCAAATGAGGG+AGG + chr4.1:31853570-31853589 None:intergenic 45.0%
TACAACTGGAGCGGATGAAA+AGG + chr4.1:31858657-31858676 None:intergenic 45.0%
TAGGAACATGGATCTCAAGG+GGG + chr4.1:31858600-31858619 None:intergenic 45.0%
TCAAAACCCTGGGACAGATA+AGG + chr4.1:31854141-31854160 None:intergenic 45.0%
TCAACAGCAAGTGGTACAAC+TGG + chr4.1:31858671-31858690 None:intergenic 45.0%
TCACTAGCACTCACAATCCA+TGG + chr4.1:31855386-31855405 None:intergenic 45.0%
TCAGCTCCTGAGACAATAAG+AGG + chr4.1:31855719-31855738 None:intergenic 45.0%
TCATTACTAACAGCGAAGGC+GGG + chr4.1:31856708-31856727 None:intergenic 45.0%
TCCACGATAAATGGGCACAT+AGG + chr4.1:31859254-31859273 None:intergenic 45.0%
TCGTCTAGTCCAAATGTGAG+AGG - chr4.1:31858707-31858726 MS.gene062886:intron 45.0%
TCTTCAAGCTGGAGAGAGAA+AGG - chr4.1:31856682-31856701 MS.gene062886:CDS 45.0%
TGAAAATGAACGCCACGAAC+AGG + chr4.1:31853207-31853226 None:intergenic 45.0%
TGAAGACTCGCAAGTATCCA+TGG + chr4.1:31853114-31853133 None:intergenic 45.0%
TGATGCTCCTGAAGGTGATT+GGG - chr4.1:31858259-31858278 MS.gene062886:intron 45.0%
TGATTGTCGTTGAGTCAAGG+AGG - chr4.1:31858858-31858877 MS.gene062886:intron 45.0%
TGCAGATGGAGCTGAAAAGA+AGG - chr4.1:31858936-31858955 MS.gene062886:intron 45.0%
TGGATCAGACTGTTCGTGTT+TGG - chr4.1:31855531-31855550 MS.gene062886:CDS 45.0%
TGGCATGATAGTCTTCAAGC+TGG - chr4.1:31856671-31856690 MS.gene062886:intron 45.0%
TGGGAAGTGGATACTTTGAG+AGG - chr4.1:31856453-31856472 MS.gene062886:intron 45.0%
TGGTATTCAAACCTTCCGCA+GGG - chr4.1:31856581-31856600 MS.gene062886:intron 45.0%
TGTCATTGCTAGCAAGAAGC+TGG - chr4.1:31857293-31857312 MS.gene062886:intron 45.0%
TTAGCGTCCTGGGACAAATA+AGG + chr4.1:31854094-31854113 None:intergenic 45.0%
TTTGCTTCCTTATCCAAGCC+GGG - chr4.1:31855132-31855151 MS.gene062886:CDS 45.0%
! AAACTTGCTCTGTAGGTCTG+AGG - chr4.1:31857143-31857162 MS.gene062886:CDS 45.0%
! AACAAAGCTAGCCTCAAGTG+AGG + chr4.1:31859031-31859050 None:intergenic 45.0%
! ACAGAGCAATCCAGAAGCAT+CGG + chr4.1:31859371-31859390 None:intergenic 45.0%
! GAACAGGAAACTTGCTCTGT+AGG - chr4.1:31857136-31857155 MS.gene062886:CDS 45.0%
! GCTTTTCCCTGTTGAAACTG+GGG - chr4.1:31854279-31854298 MS.gene062886:CDS 45.0%
! GGGAAGTGGATACTTTGAGA+GGG - chr4.1:31856454-31856473 MS.gene062886:intron 45.0%
! TCGAGAGCGTGTTAAGATCT+TGG - chr4.1:31857986-31858005 MS.gene062886:intron 45.0%
! TGCGAGGCATATTTGATGGT+GGG - chr4.1:31858195-31858214 MS.gene062886:intron 45.0%
!! AATTTGTAAGGAAGTGCCGG+TGG + chr4.1:31858734-31858753 None:intergenic 45.0%
!! ATTTGTAAGGAAGTGCCGGT+GGG + chr4.1:31858733-31858752 None:intergenic 45.0%
!! CGTGTACTGACAGAAGCTTT+TGG + chr4.1:31858428-31858447 None:intergenic 45.0%
!! GAAAGATCACTGGTACCGAT+TGG - chr4.1:31857770-31857789 MS.gene062886:intron 45.0%
!! GAGTTTGATGATGCTCCTGA+AGG - chr4.1:31858251-31858270 MS.gene062886:intron 45.0%
!! GATATCGGCTTGGATGTTGA+TGG - chr4.1:31858287-31858306 MS.gene062886:intron 45.0%
!! GATGGAGGTATCAAGAGAGA+TGG + chr4.1:31858134-31858153 None:intergenic 45.0%
!! GGTGATTGGGTTGAGGATAT+CGG - chr4.1:31858272-31858291 MS.gene062886:intron 45.0%
!! GTACCACTTGCTGTTGAAAG+GGG - chr4.1:31858674-31858693 MS.gene062886:intron 45.0%
!!! ATCTGTCCCAGGGTTTTGAA+AGG - chr4.1:31854142-31854161 MS.gene062886:CDS 45.0%
!!! CTTTTGGAGTGTCTGCTTCA+GGG + chr4.1:31858412-31858431 None:intergenic 45.0%
!!! TTTTGGAGTGTCTGCTTCAG+GGG + chr4.1:31858411-31858430 None:intergenic 45.0%
!! AATTTAATCAAATTATATTA+TGG + chr4.1:31855177-31855196 None:intergenic 5.0%
!! ATTTAATCAAATTATATTAT+GGG + chr4.1:31855176-31855195 None:intergenic 5.0%
!! TAAAAAATAAATTAAAAAGA+CGG + chr4.1:31855885-31855904 None:intergenic 5.0%
AACGTTCCATCTTTGCCCGA+GGG - chr4.1:31858101-31858120 MS.gene062886:intron 50.0%
AAGGTGATGAAGAGGGTGGA+TGG - chr4.1:31858363-31858382 MS.gene062886:intron 50.0%
AATATGCTGCGAGTTCCTGC+TGG + chr4.1:31858985-31859004 None:intergenic 50.0%
ACAGTGGTGTGATCCAGCTA+TGG - chr4.1:31853133-31853152 MS.gene062886:CDS 50.0%
AGACACTAAGGCATGGGAAG+TGG - chr4.1:31856440-31856459 MS.gene062886:intron 50.0%
AGAGATGGTACTTTCCCCTC+GGG + chr4.1:31858119-31858138 None:intergenic 50.0%
AGCAACGTCATGTAGCCCAT+GGG + chr4.1:31858054-31858073 None:intergenic 50.0%
AGCAAGTGGTACAACTGGAG+CGG + chr4.1:31858666-31858685 None:intergenic 50.0%
AGGTGATGAAGAGGGTGGAT+GGG - chr4.1:31858364-31858383 MS.gene062886:intron 50.0%
AGTTAGGCCCCAGTTTCAAC+AGG + chr4.1:31854289-31854308 None:intergenic 50.0%
ATACCATCTTCTGCTTGGGC+CGG - chr4.1:31857487-31857506 MS.gene062886:intron 50.0%
ATATGCCTCGCATGACCCTA+AGG + chr4.1:31858187-31858206 None:intergenic 50.0%
CAACCCCTTTCAACAGCAAG+TGG + chr4.1:31858680-31858699 None:intergenic 50.0%
CAGTGGTGTGATCCAGCTAT+GGG - chr4.1:31853134-31853153 MS.gene062886:CDS 50.0%
CCACAACACAGTACAGGTGA+TGG + chr4.1:31858152-31858171 None:intergenic 50.0%
CCAGCTATGGGACTATCGAA+TGG - chr4.1:31853146-31853165 MS.gene062886:CDS 50.0%
CCATCACCTGTACTGTGTTG+TGG - chr4.1:31858149-31858168 MS.gene062886:intron 50.0%
CCATTCGATAGTCCCATAGC+TGG + chr4.1:31853149-31853168 None:intergenic 50.0%
CTGCCAATTCCAGATGCGAA+TGG + chr4.1:31855417-31855436 None:intergenic 50.0%
CTGGTATTCAAACCTTCCGC+AGG - chr4.1:31856580-31856599 MS.gene062886:intron 50.0%
CTTCTCTGCTCTGATGTGGA+CGG - chr4.1:31856880-31856899 MS.gene062886:CDS 50.0%
GAACATGATGGTCCTGTTCG+TGG - chr4.1:31853192-31853211 MS.gene062886:CDS 50.0%
GAAGAAGGTGATGAAGAGGG+TGG - chr4.1:31858359-31858378 MS.gene062886:intron 50.0%
GAGAGATGGTACTTTCCCCT+CGG + chr4.1:31858120-31858139 None:intergenic 50.0%
GATCAGCAGTCTTTGTGGCT+CGG - chr4.1:31856998-31857017 MS.gene062886:CDS 50.0%
GCCCATTTATCGTGGACAGA+AGG - chr4.1:31859258-31859277 MS.gene062886:CDS 50.0%
GCCTTCCAAATGGAGACAGT+GGG - chr4.1:31857415-31857434 MS.gene062886:intron 50.0%
GCTCTGTAGGTCTGAGGATA+GGG - chr4.1:31857149-31857168 MS.gene062886:CDS 50.0%
GGAGTTGAAGCTCTTCGACA+AGG - chr4.1:31857792-31857811 MS.gene062886:intron 50.0%
GGATGGCAGTTAGCCAGATA+TGG - chr4.1:31858477-31858496 MS.gene062886:intron 50.0%
GGCTACATGACGTTGCTGAA+AGG - chr4.1:31858057-31858076 MS.gene062886:intron 50.0%
GGCTGAAGAAGGTGATGAAG+AGG - chr4.1:31858355-31858374 MS.gene062886:intron 50.0%
GGGGGTCTTACATACAGAGA+CGG + chr4.1:31856102-31856121 None:intergenic 50.0%
GGGGTCTTACATACAGAGAC+GGG + chr4.1:31856101-31856120 None:intergenic 50.0%
GGGTCTTACATACAGAGACG+GGG + chr4.1:31856100-31856119 None:intergenic 50.0%
GGTTCTCTCAAAAGGAAGGC+TGG - chr4.1:31855560-31855579 MS.gene062886:CDS 50.0%
GTATCCATGGTCTCTTGCTG+TGG + chr4.1:31853101-31853120 None:intergenic 50.0%
GTCATGCTAACAAGTGCCCA+CGG - chr4.1:31855002-31855021 MS.gene062886:CDS 50.0%
GTTAGGCCCCAGTTTCAACA+GGG + chr4.1:31854288-31854307 None:intergenic 50.0%
GTTTCCACAGCAAGAGACCA+TGG - chr4.1:31853094-31853113 MS.gene062886:CDS 50.0%
TAACTGCCATCCCAGGTGTT+GGG + chr4.1:31858469-31858488 None:intergenic 50.0%
TAAGACAGCAAGGCAAGTGC+TGG - chr4.1:31859150-31859169 MS.gene062886:intron 50.0%
TACTTACTATTCGGCGACCC+TGG - chr4.1:31856796-31856815 MS.gene062886:CDS 50.0%
TCCCACTGTCTCCATTTGGA+AGG + chr4.1:31857419-31857438 None:intergenic 50.0%
TCCTCAACCCAATCACCTTC+AGG + chr4.1:31858269-31858288 None:intergenic 50.0%
TGCCTTCCAAATGGAGACAG+TGG - chr4.1:31857414-31857433 MS.gene062886:intron 50.0%
TGCTCTGTAGGTCTGAGGAT+AGG - chr4.1:31857148-31857167 MS.gene062886:CDS 50.0%
TGGAGGATCAGCAGTCTTTG+TGG - chr4.1:31856993-31857012 MS.gene062886:CDS 50.0%
TGGGATGCAACAAAGAGGAC+TGG - chr4.1:31856561-31856580 MS.gene062886:intron 50.0%
TGTGTGATCCCTCCCTCATT+TGG - chr4.1:31853558-31853577 MS.gene062886:CDS 50.0%
TGTGTTGGAAGGTCATGACC+GGG - chr4.1:31855661-31855680 MS.gene062886:intron 50.0%
TTGCTTCCTTATCCAAGCCG+GGG - chr4.1:31855133-31855152 MS.gene062886:CDS 50.0%
TTGGCAGCTGGTCATGATAG+TGG - chr4.1:31856651-31856670 MS.gene062886:intron 50.0%
TTTCGTACACCTCACGGTCA+CGG + chr4.1:31854546-31854565 None:intergenic 50.0%
! CAACACAGTACAGGTGATGG+AGG + chr4.1:31858149-31858168 None:intergenic 50.0%
! CAGTCTTTGTGGCTCGGAAT+AGG - chr4.1:31857004-31857023 MS.gene062886:CDS 50.0%
! CGGCTTGGATGTTGATGGAT+TGG - chr4.1:31858292-31858311 MS.gene062886:intron 50.0%
! CGTTTTGTACCAACCCAGGA+GGG - chr4.1:31859307-31859326 MS.gene062886:CDS 50.0%
! CTTGCCTTGCTGTCTTAGCT+TGG + chr4.1:31859147-31859166 None:intergenic 50.0%
! GAGGTGTCTGAAGATTGCAG+TGG + chr4.1:31859012-31859031 None:intergenic 50.0%
! GTTTTGTACCAACCCAGGAG+GGG - chr4.1:31859308-31859327 MS.gene062886:CDS 50.0%
! TCCTGAAGGTGATTGGGTTG+AGG - chr4.1:31858265-31858284 MS.gene062886:intron 50.0%
! TTCCCGTTTTGTACCAACCC+AGG - chr4.1:31859303-31859322 MS.gene062886:CDS 50.0%
! TTTGGAGTGTCTGCTTCAGG+GGG + chr4.1:31858410-31858429 None:intergenic 50.0%
! TTTTTGTGGCCCCAACACCT+GGG - chr4.1:31858456-31858475 MS.gene062886:intron 50.0%
!! AAAGGCTTGCTGCTGAACTG+GGG - chr4.1:31858075-31858094 MS.gene062886:intron 50.0%
!! CACTTGCTGTTGAAAGGGGT+TGG - chr4.1:31858678-31858697 MS.gene062886:intron 50.0%
!! CCTCCTGGGTTGGTACAAAA+CGG + chr4.1:31859309-31859328 None:intergenic 50.0%
!! CTCCTGGGTTGGTACAAAAC+GGG + chr4.1:31859308-31859327 None:intergenic 50.0%
!! GAAAGGCTTGCTGCTGAACT+GGG - chr4.1:31858074-31858093 MS.gene062886:intron 50.0%
!! GCAGGGAACATGACCGATTT+TGG - chr4.1:31856598-31856617 MS.gene062886:intron 50.0%
!! GTATGTTCTGGCTCTGCAGA+TGG - chr4.1:31858922-31858941 MS.gene062886:intron 50.0%
!! TGAAAGGCTTGCTGCTGAAC+TGG - chr4.1:31858073-31858092 MS.gene062886:intron 50.0%
!! TTGGGTTGAGGATATCGGCT+TGG - chr4.1:31858277-31858296 MS.gene062886:intron 50.0%
!!! GCTTTTGGAGTGTCTGCTTC+AGG + chr4.1:31858413-31858432 None:intergenic 50.0%
ACGAACAGTCTGATCCAGGG+AGG + chr4.1:31855528-31855547 None:intergenic 55.0%
ACGTTCCATCTTTGCCCGAG+GGG - chr4.1:31858102-31858121 MS.gene062886:intron 55.0%
ACTTTCCCCTCGGGCAAAGA+TGG + chr4.1:31858110-31858129 None:intergenic 55.0%
ATCTGGCTAACTGCCATCCC+AGG + chr4.1:31858476-31858495 None:intergenic 55.0%
ATGCTAACAAGTGCCCACGG+CGG - chr4.1:31855005-31855024 MS.gene062886:CDS 55.0%
CAACGTTCCATCTTTGCCCG+AGG - chr4.1:31858100-31858119 MS.gene062886:intron 55.0%
CAGCAACGTCATGTAGCCCA+TGG + chr4.1:31858055-31858074 None:intergenic 55.0%
CCACAGCTGGTAACTTCGCT+AGG - chr4.1:31859089-31859108 MS.gene062886:intron 55.0%
CCGTGTAAAAAGCGGAGCCT+GGG - chr4.1:31857344-31857363 MS.gene062886:intron 55.0%
CCTAGCGAAGTTACCAGCTG+TGG + chr4.1:31859092-31859111 None:intergenic 55.0%
CGAAGTTACCAGCTGTGGCA+AGG + chr4.1:31859087-31859106 None:intergenic 55.0%
CGTTGAGTCAAGGAGGGAAG+TGG - chr4.1:31858865-31858884 MS.gene062886:intron 55.0%
CTAACTGCCATCCCAGGTGT+TGG + chr4.1:31858470-31858489 None:intergenic 55.0%
GCAAAGAACCTTGCCACAGC+TGG - chr4.1:31859076-31859095 MS.gene062886:intron 55.0%
GCTCTTCGACAAGGCAATGC+TGG - chr4.1:31857801-31857820 MS.gene062886:intron 55.0%
GTGTTGGAAGGTCATGACCG+GGG - chr4.1:31855662-31855681 MS.gene062886:intron 55.0%
TACCATCTTCTGCTTGGGCC+GGG - chr4.1:31857488-31857507 MS.gene062886:intron 55.0%
TATTGTCGTGTCAGCCTCCC+TGG - chr4.1:31855511-31855530 MS.gene062886:CDS 55.0%
TCCAAATGTGAGAGGCCCAC+CGG - chr4.1:31858715-31858734 MS.gene062886:intron 55.0%
TCCGTGTAAAAAGCGGAGCC+TGG - chr4.1:31857343-31857362 MS.gene062886:intron 55.0%
TGCTTCCTTATCCAAGCCGG+GGG - chr4.1:31855134-31855153 MS.gene062886:CDS 55.0%
! AACTGCCATCCCAGGTGTTG+GGG + chr4.1:31858468-31858487 None:intergenic 55.0%
! CCGTTTTGTACCAACCCAGG+AGG - chr4.1:31859306-31859325 MS.gene062886:CDS 55.0%
! GTTTTTGTGGCCCCAACACC+TGG - chr4.1:31858455-31858474 MS.gene062886:intron 55.0%
! TCATGACCGGGGTGTCAACT+GGG - chr4.1:31855673-31855692 MS.gene062886:intron 55.0%
! TGGTGATTGGCCGCTCCTTA+GGG - chr4.1:31858169-31858188 MS.gene062886:intron 55.0%
! TTGGAGTGTCTGCTTCAGGG+GGG + chr4.1:31858409-31858428 None:intergenic 55.0%
!! AAGGCTTGCTGCTGAACTGG+GGG - chr4.1:31858076-31858095 MS.gene062886:intron 55.0%
!! AAGTGCTGGCTGCTGCAGAA+AGG - chr4.1:31859164-31859183 MS.gene062886:intron 55.0%
!!! CCCAGGCTCCGCTTTTTACA+CGG + chr4.1:31857347-31857366 None:intergenic 55.0%
AAGCAGCCCAGTTGACACCC+CGG + chr4.1:31855682-31855701 None:intergenic 60.0%
ACACCTCACGGTCACGGCAT+AGG + chr4.1:31854540-31854559 None:intergenic 60.0%
AGCGGAGCCTGGGATGACAA+TGG - chr4.1:31857354-31857373 MS.gene062886:intron 60.0%
AGTGCATAGCTGCCCCTCCT+GGG + chr4.1:31859323-31859342 None:intergenic 60.0%
ATCCCGGCCCAAGCAGAAGA+TGG + chr4.1:31857493-31857512 None:intergenic 60.0%
ATCTTCTGCTTGGGCCGGGA+TGG - chr4.1:31857492-31857511 MS.gene062886:intron 60.0%
CACCTCACGGTCACGGCATA+GGG + chr4.1:31854539-31854558 None:intergenic 60.0%
CCTCGCATGACCCTAAGGAG+CGG + chr4.1:31858182-31858201 None:intergenic 60.0%
CTAAACAATGCCCCCCGGCT+TGG + chr4.1:31855148-31855167 None:intergenic 60.0%
CTCTGCTCTGATGTGGACGG+TGG - chr4.1:31856883-31856902 MS.gene062886:CDS 60.0%
CTTAACAAGTGCCCCGCCGT+GGG + chr4.1:31855021-31855040 None:intergenic 60.0%
GATGGAGAGGCGGCTGAAGA+AGG - chr4.1:31858344-31858363 MS.gene062886:intron 60.0%
GCTGCTGATCATGCAGCTGC+TGG - chr4.1:31858518-31858537 MS.gene062886:intron 60.0%
GCTTCCTTATCCAAGCCGGG+GGG - chr4.1:31855135-31855154 MS.gene062886:CDS 60.0%
GGCGCGAAGATACGAGTGAC+TGG + chr4.1:31858636-31858655 None:intergenic 60.0%
TCGGTCATGTTCCCTGCGGA+AGG + chr4.1:31856595-31856614 None:intergenic 60.0%
TCTTCTGCTTGGGCCGGGAT+GGG - chr4.1:31857493-31857512 MS.gene062886:intron 60.0%
TGAAGAGGGTGGATGGGAGC+TGG - chr4.1:31858370-31858389 MS.gene062886:intron 60.0%
TGCTAACAAGTGCCCACGGC+GGG - chr4.1:31855006-31855025 MS.gene062886:CDS 60.0%
! GTCATGACCGGGGTGTCAAC+TGG - chr4.1:31855672-31855691 MS.gene062886:intron 60.0%
! GTGGTGATTGGCCGCTCCTT+AGG - chr4.1:31858168-31858187 MS.gene062886:intron 60.0%
!! AATGCCCCCCGGCTTGGATA+AGG + chr4.1:31855142-31855161 None:intergenic 60.0%
CACCCTATGCCGTGACCGTG+AGG - chr4.1:31854534-31854553 MS.gene062886:CDS 65.0%
CAGTGCATAGCTGCCCCTCC+TGG + chr4.1:31859324-31859343 None:intergenic 65.0%
CATAGCTGCCCCTCCTGGGT+TGG + chr4.1:31859319-31859338 None:intergenic 65.0%
CCGCTCCTTAGGGTCATGCG+AGG - chr4.1:31858179-31858198 MS.gene062886:intron 65.0%
CCTTAACAAGTGCCCCGCCG+TGG + chr4.1:31855022-31855041 None:intergenic 65.0%
GCCGGTGGGCCTCTCACATT+TGG + chr4.1:31858719-31858738 None:intergenic 65.0%
GCTAACAAGTGCCCACGGCG+GGG - chr4.1:31855007-31855026 MS.gene062886:CDS 65.0%
GGACAATCCAGCACGCCAGC+AGG - chr4.1:31858967-31858986 MS.gene062886:intron 65.0%
GTTGTCGGGGCCGATGCTTC+TGG - chr4.1:31859358-31859377 MS.gene062886:CDS 65.0%
TGTGGCCCCAACACCTGGGA+TGG - chr4.1:31858460-31858479 MS.gene062886:intron 65.0%
! CCACGGCGGGGCACTTGTTA+AGG - chr4.1:31855019-31855038 MS.gene062886:CDS 65.0%
GCGAGTTCCTGCTGGCGTGC+TGG + chr4.1:31858977-31858996 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 31853040 31859411 31853040 ID=MS.gene062886
chr4.1 mRNA 31853040 31859411 31853040 ID=MS.gene062886.t1;Parent=MS.gene062886
chr4.1 exon 31859196 31859411 31859196 ID=MS.gene062886.t1.exon1;Parent=MS.gene062886.t1
chr4.1 CDS 31859196 31859411 31859196 ID=cds.MS.gene062886.t1;Parent=MS.gene062886.t1
chr4.1 exon 31856681 31857175 31856681 ID=MS.gene062886.t1.exon2;Parent=MS.gene062886.t1
chr4.1 CDS 31856681 31857175 31856681 ID=cds.MS.gene062886.t1;Parent=MS.gene062886.t1
chr4.1 exon 31855718 31856009 31855718 ID=MS.gene062886.t1.exon3;Parent=MS.gene062886.t1
chr4.1 CDS 31855718 31856009 31855718 ID=cds.MS.gene062886.t1;Parent=MS.gene062886.t1
chr4.1 exon 31854768 31855668 31854768 ID=MS.gene062886.t1.exon4;Parent=MS.gene062886.t1
chr4.1 CDS 31854768 31855668 31854768 ID=cds.MS.gene062886.t1;Parent=MS.gene062886.t1
chr4.1 exon 31853040 31854731 31853040 ID=MS.gene062886.t1.exon5;Parent=MS.gene062886.t1
chr4.1 CDS 31853040 31854731 31853040 ID=cds.MS.gene062886.t1;Parent=MS.gene062886.t1
Gene Sequence

>MS.gene062886

AGGGAAAGATGTTAACGAAATTCGAGACGAAAAGTAACAGAGTGAAGGGATTGAGTTTCCACAGCAAGAGACCATGGATACTTGCGAGTCTTCACAGTGGTGTGATCCAGCTATGGGACTATCGAATGGGGACCTTGATTGATCGATTCGATGAACATGATGGTCCTGTTCGTGGCGTTCATTTTCACAATTCTCAACCTCTCTTTGTATCTGGAGGTACCCGCTAGCTTCATAATTACTCTGATCTGTTCTTTTGTGCATCTTTTCTTGTGTTTTGATTTGTTTTTCGGCATAGACATACATAAATAAACGCACTTATTGTTAATGTATACTACTTCTAAATCTACACTCATTGCAAAATTTGAGTTACATTGGATTTATGTATTGATGTAAACTATACTGTGATCCGCTTAAACTTTTCGTGGTATGTGGAGATTTATGTTTAGAAATTGCCTCGCTGTTTAGATCTTGCATACTAAACTGATAAATGTTAATATAATAGGTTTAGAGGAACTAGGTGTGTGATCCCTCCCTCATTTGGCTTGTCTTAAAACGATTTGATGCATTTCTCAACATAATGATTTAACACTTATCTCTACTAATTCTTCCATCTCTTCACTTTTACATCTTCACCCATGGCAAAATTTGCGTTGCATTGGATGTATGTATGTATGTATCGCTAGTGGGATCCACTTAAACTTTTTTTGGTATGTGTAACAAACTGCTTCTCTGTTTAGATCTTGCATACTGAGCCGATGAAATGTTAATATTATTGGTTAAGATGAACTGTGATGTGATTTCTATCTTTCTAGGCCTTTTCTATTAACAACCTAAACTGATGAAATGTAGATATGTTTACAGGAATTTTGATGTAATTTCTACCTTTTTAGGAATTTTCTATCTCACAATCTAAACTGATGAAATGTTATAGGTTTTGAGGAATTGTGTGTGTGATACCTTGGATTGGCTTGTCTGCATTTTGTAATATATAAGGATAAGGATTTAATGCTTATCTTATATCTGCTAATTCTTGTATCTCTTCACCTTTGTTCCTTATTTGTCCCAGGACGCTAATTCTTGTAACTCTTCACCTTTGTTCCTTATCTGTCCCAGGGTTTTGAAAGGATACTATGGGTGTGTTTGTTTTAGATTTTTAGATTTTTTTTCTTTCTAAATCACCTTTGTCATTTTTATAGAAAAAATAGTTTTTCACTCTAAAATGAAAAGCTACTAGGATTAGCTTTTCCCTGTTGAAACTGGGGCCTAACTCATCCTTATAAAACCGGCTTATCAAGAGTCCTATCTATCCGAAAATCAATTTTTTTCAAAAACAAAGAGGTAACACATGAACAAGTTAAAAATCATTCTTTTAAAAAAAGTGATCTTTATGGATTGTAAACAAACAGAAAGAGCTTCACTTTTTTTTTTTTAAATCTTTAAAAAATATCTCTAGATTTTTTAACACAATCTAGTTTATTAAAGCTGAAACAAAGACACCCTATGCCGTGACCGTGAGGTGTACGAAACTAAGAATGGGCTATGCTTTATATGTTTTCAAAAGTTGTTTGCGATTTATTTATTTTTATAGGGAATAAGATCTGTTTGGTGTGATTTAAATGCTTTGGATCTGGAAATTAGTAACTAATATCAACATGACCTTTTAACAAATCATTGGTTCTGGTGCATGAAATCTCTAATGATTGTGTGTATATTAGTGTGGTTTTCTGTAAGTTTAACTTGTCAGTTTGTGTGGAGGAGATCTTGGTGTGTCACATACAACCATAAATTAAAGAGAAATCCTACCAAAAATAAATAAATTAAAGAGAAATGATTTTTTTCAACATCAAGATTTTGAAGTTGAATATGTTGTTCTTTGGTTTCTGTGTGTATTTTTGAAAGGTAAGAGAGATATGCAGATAAACACATATGATGTCAGTATTTTGATGTTCAAATAATATAATGGTCATGCTAACAAGTGCCCACGGCGGGGCACTTGTTAAGGTAACCAAAATTAGTAGCTTTACATTGGAAACAACAATTTTTAAACTTTTTATAAGTTGACTTGACCGCTTTTCAACTCAATTTTTCTATTTTTGCTTCCTTATCCAAGCCGGGGGGCATTGTTTAGCATTTCCCATAATATAATTTGATTAAATTATTGTTGCATATTGGAAGGAGAGGGTTTTACTTTATACAATTTCATGCTTATTGATTATTATACTTTTTATTGGGACAGGGGATGATTACAAGATTAAGGTCTGGAACTATAAGATGCATAGGTGCTTATTCACTCTTCTAGGACACCTTGATTATATTCGTACAGTGCAATTTCATCATGAGAACCCATGGATTGTGAGTGCTAGTGATGATCAAACCATTCGCATCTGGAATTGGCAGTCACGTACCTGTATATCTGTTTTAACTGGGCACAACCATTATGTTATGTGTGCTTCATTCCATCCAAAAGAGGATATTGTCGTGTCAGCCTCCCTGGATCAGACTGTTCGTGTTTGGGATATTGGTTCTCTCAAAAGGAAGGCTGGACCTCCTTCAGATGATATTTTGCGATTGAGTCAGATGAACACTGATCTTTTTGGTGGCGTCGATGCAGTTGTTAAGTATGTGTTGGAAGGTCATGACCGGGGTGTCAACTGGGCTGCTTTTCATCCTACACTGCCTCTTATTGTCTCAGGAGCTGATGACCGTCAAGTGAAACTTTGGAGGATGAATGGTAATATGAAACCTTGTTATTTACTTTACGCTGCCTGAATCACGAATATCTGAAAATATTAATGACTTTCAATTTTGTCTATTAAAGTTCAGCTCACTGGGCTTTCATGCACCGTCTTTTTAATTTATTTTTTAATTTTTTTTATCAAGCTTCCATGCATTGTCTTGATGCTGTACCAGTTGTTACAAATATTCATACAACAGTGTTTAGAGGAGCTTGTGTATTGCTCACAGCAAAACGTTTCATGCAATGCATTTCTTGTACATATTTTTTTTTTTTTTTGAAGAAGATAAAGCATTTCTTGTACATATTAACTTTATTACTATCCCCGTCTCTGTATGTAAGACCCCCTTGTAAATTTTTTGTCCCTTATAAGAACCTTTTCAAATTACAAGGTATATTAATGATATTTCACAAAAGTATCCATAATTAAATGGAGAGAATTAAAATATTAACAATTTATCTCTTTTAATAATTGAAGGATAACTTTGGAAAGAGAATGTAATTGTTGACAGATTTAATGTATAACAATTTTTCTTAATTATTGTGCATTGGTTAAGGTCTTACATATAAGGACGGAGGTAGTACTATGCAGTTAACGAAAAATAAAAACACTGAGTTGTTAGAGTGACCTTCTCTATTCCCTAATTAAATTTATTCTCTGTTTTCAGACACTAAGGCATGGGAAGTGGATACTTTGAGAGGGCACATGAATAATGTTTCATGTGTTATGTTCCATGCCAAACAGGACATCATTGTGTCAAATTCTGAGGATAAAAGTATTCGAGTATGGGATGCAACAAAGAGGACTGGTATTCAAACCTTCCGCAGGGAACATGACCGATTTTGGATTCTTTCAACTCATCCTGAAATGAATCTGTTGGCAGCTGGTCATGATAGTGGCATGATAGTCTTCAAGCTGGAGAGAGAAAGGCCCGCCTTCGCTGTTAGTAATGATTCTTTGTTCTACACCAAAGACCGCTTTTTGCGTTTCTATGAATTTTCAACACAGAGAGAGACACAAGTACTTACTATTCGGCGACCCTGGTTCTTTAAGCCTGAATCAAAGTCCTAAGACTCTTTCCTACAGTCCTACTGAAAATGCAATTCTTCTCTGCTCTGATGTGGACGGTGGATCTTATGAGTTGTACTGCATATCCAAGGATAGCACAATTAAGGACAGTTTTGGTAGGGGTGATATGCAAGAACCAAAGAAAGGTCTTGGAGGATCAGCAGTCTTTGTGGCTCGGAATAGGTTTGCCGTGCTTGAAAAAAGCAGCAACCAAGTCCTTTTAAAAAACCTGAAGAACGAGCTTGTTAAAAAGAGTGTGCTCCCTATTGCCACTGATGCTATATTTTATGCTGGAACAGGAAACTTGCTCTGTAGGTCTGAGGATAGGGTTTTTATATTTGATCTTCAGCAGAGGATTGTTCTTGGCGATCTTCAGACCCCTTTCATCAAGTATGTAGTCTGGTCTAATGAGAACAATGACAGTGTTGCTTTACTCAGCAAACATGCAATTGTCATTGCTAGCAAGAAGCTGGTGCATCAATGCACCCTCCACGAGACAATCCGTGTAAAAAGCGGAGCCTGGGATGACAATGGTATTTTTATTTACACAACATTAAATCATATCAAATACTGCCTTCCAAATGGAGACAGTGGGATAATAAAAACACTGGACGTCCCAATCTATATCACCAAGGTTGTTGGAAATACCATCTTCTGCTTGGGCCGGGATGGGAAAAACAAAGCTATAACCATTGATGCTACTGAGTATATCTTTAAGCTTTCCTTGTTGAAGAAAAGGTATGACCATGTTATGAACATGATAAAGAATTCACAACTTTGTGGACAAGCTATGATTGCTTATCTACAACAGAAAGGATTTCCTGAGGTTGCTCTCCATTTTGTGAAAGATGAGAGAATTCGGTTCAATTGGCTATAGAGAGTGGGAACATTCAAATTGCAAGTTGCATCAGCTACAGCAATTGATGAGAAAGATCACTGGTACCGATTGGGAGTTGAAGCTCTTCGACAAGGCAATGCTGGTATAGTGGAGTATGCATATCAGAGGACCAAGAATTTTGAAAGATTATCTTTCCTATATCTCATCACTGGTAATGTAGAGAAACTATCAAAGATGTTGAAAATTGCTGAAGTCAAGAATGATGTCATGGGCCAGTTTCACAATGCCTTATATATGGGTGATATTCGAGAGCGTGTTAAGATCTTGGAGAATGTGGGCCACTTGCCTCTTGCTTATATCACTGCATCAACCCATGGGCTACATGACGTTGCTGAAAGGCTTGCTGCTGAACTGGGGGACAACGTTCCATCTTTGCCCGAGGGGAAAGTACCATCTCTCTTGATACCTCCATCACCTGTACTGTGTTGTGGTGATTGGCCGCTCCTTAGGGTCATGCGAGGCATATTTGATGGTGGGTTTAGAAATGCTGATCAAGATGCTGACGAAGAAGAGTTTGATGATGCTCCTGAAGGTGATTGGGTTGAGGATATCGGCTTGGATGTTGATGGATTGGAAAATGGAGATGTTACTGCAATTTTGGATGATGGAGAGGCGGCTGAAGAAGGTGATGAAGAGGGTGGATGGGAGCTGGAAGATTTAGAGCTCCCCCCTGAAGCAGACACTCCAAAAGCTTCTGTCAGTACACGGTCTTCAGTTTTTGTGGCCCCAACACCTGGGATGGCAGTTAGCCAGATATGGATTCAGAGATCATCTCTTGCTGCTGATCATGCAGCTGCTGGCAATTTTGATACTGCAATGAGATTACTGAACAGGCAGCTTGGGATAAAAAACTTTGCCCCCTTGAGATCCATGTTCCTAGATCTTCATTCTGCCAGTCACTCGTATCTTCGCGCCTTTTCATCCGCTCCAGTTGTACCACTTGCTGTTGAAAGGGGTTGGACAGAGTCGTCTAGTCCAAATGTGAGAGGCCCACCGGCACTTCCTTACAAATTGTCTCAATTAGATGAAAAGCTCAAAGCTGGTTATAAGTCAACAACTGCTGGGAAATTCACTGAGGCTCTTCGGACATTTGCCAATATTCTCCATACAATCCCTTTGATTGTCGTTGAGTCAAGGAGGGAAGTGGATGATGTAAAGGAATTGATAATCATAGTCAAAGAGTATGTTCTGGCTCTGCAGATGGAGCTGAAAAGAAGGGAAATGAAGGACAATCCAGCACGCCAGCAGGAACTCGCAGCATATTTCACCCACTGCAATCTTCAGACACCTCACTTGAGGCTAGCTTTGTTGAATGCAATGACTGTCTGCTACAAAGCAAAGAACCTTGCCACAGCTGGTAACTTCGCTAGGAGACTACTCGAGACCAATCCTAGCATCGAAAACCAAGCTAAGACAGCAAGGCAAGTGCTGGCTGCTGCAGAAAGGAATATGACTGATGCCACGGAGTTGAACTATGATTTCAGAAACCCATTTGTAATCTGTGGGGCAACCTATGTGCCCATTTATCGTGGACAGAAGGACGTTTCTTGCCCATATTGTACTTCCCGTTTTGTACCAACCCAGGAGGGGCAGCTATGCACTGTGTGTGAACTTTCAGTTGTCGGGGCCGATGCTTCTGGATTGCTCTGTTCTCCTGCCCAGATTCGTTGA
Protein sequence

>MS.gene062886.t1

RERCURNSRRKVTEURDUVSTARDHGYLRVFTVVUSSYGTIEWGPULIDSMNMMVLFVAFIFTILNLSLYLEGMITRLRSGTIRCIGAYSLFUDTLIIFVQCNFIMRTHGLUVLVMIKPFASGIGSHVPVYLFULGTTIMLCVLHSIQKRILSCQPPWIRLFVFGILVLSKGRLDLLQMIFCDUVRUTLIFLVASMQLLSMCWKVMTGVSTGLLFILHCLLLSQELMTVKUNFGGUMTLRHGKWILUEGTUIMFHVLCSMPNRTSLCQILRIKVFEYGMQQRGLVFKPSAGNMTDFGFFQLILKUICWQLVMIVAUUSSSWREKGPPSLLVMILURDTSTYYSATLVLUAUIKVLRLFPTVLLKMQFFSALMWTVDLMSCTAYPRIAQLRTVLVGVICKNQRKVLEDQQSLWLGIGLPCLKKAATKSFUKTURTSLLKRVCSLLPLMLYFMLEQETCSVGLRIGFLYLIFSRGLFLAIFRPLSSSMUSGLMRTMTVLLYSANMQLSLLARSWCINAPSTRQSVUKAEPGMTMVFLFTQHUIISNTAFQMETVGUUKHWTSQSISPRLLEIPSSAWAGMGKTKLUPLMLLSISLSFPCURKGMTMLUTUURIHNFVDKLULLIYNRKDFLRLLSILEWEHSNCKLHQLQQLMRKITGTDWELKLFDKAMLVUWSMHIRGPRILKDYLSYISSLVMURNYQRCUKLLKSRMMSWASFTMPYIWVIFESVLRSWRMWATCLLLISLHQPMGYMTLLKGLLLNWGTTFHLCPRGKYHLSUYLHHLYCVVVIGRSLGSCEAYLMVGLEMLIKMLTKKSLMMLLKVIGLRISAWMLMDWKMEMLLQFWMMERRLKKVMKRVDGSWKIUSSPLKQTLQKLLSVHGLQFLWPQHLGWQLARYGFRDHLLLLIMQLLAILILQUDYUTGSLGUKTLPPUDPCSUIFILPVTRIFAPFHPLQLYHLLLKGVGQSRLVQMUEAHRHFLTNCLNUMKSSKLVISQQLLGNSLRLFGHLPIFSIQSLULSLSQGGKWMMURNUUSUSKSMFWLCRWSUKEGKURTIQHASRNSQHISPTAIFRHLTUGULCUMQULSATKQRTLPQLVTSLGDYSRPILASKTKLRQQGKCWLLQKGIULMPRSUTMISETHLUSVGQPMCPFIVDRRTFLAHIVLPVLYQPRRGSYALCVNFQLSGPMLLDCSVLLPRFV