Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050436.t1 | XP_003626013.1 | 99.3 | 724 | 2 | 1 | 1 | 721 | 1 | 724 | 0.00E+00 | 1417.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050436.t1 | Q9M1P7 | 81.0 | 720 | 112 | 6 | 1 | 715 | 1 | 700 | 0.0e+00 | 1147.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050436.t1 | G7KTQ1 | 99.3 | 724 | 2 | 1 | 1 | 721 | 1 | 724 | 0.0e+00 | 1417.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050436 | MS.gene062886 | 0.805473 | 1.31E-49 | -1.69E-46 |
| MS.gene050436 | MS.gene062887 | 0.806434 | 8.24E-50 | -1.69E-46 |
| MS.gene050436 | MS.gene062888 | 0.806638 | 7.46E-50 | -1.69E-46 |
| MS.gene050436 | MS.gene07091 | 0.993365 | 3.10E-199 | -1.69E-46 |
| MS.gene050436 | MS.gene074403 | 0.812316 | 4.51E-51 | -1.69E-46 |
| MS.gene050436 | MS.gene25900 | 0.813827 | 2.10E-51 | -1.69E-46 |
| MS.gene050436 | MS.gene28843 | 0.986154 | 7.56E-166 | -1.69E-46 |
| MS.gene050436 | MS.gene70576 | 0.816794 | 4.60E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene92776 | MS.gene050436 | PPI |
| MS.gene036929 | MS.gene050436 | PPI |
| MS.gene77305 | MS.gene050436 | PPI |
| MS.gene62009 | MS.gene050436 | PPI |
| MS.gene44764 | MS.gene050436 | PPI |
| MS.gene98782 | MS.gene050436 | PPI |
| MS.gene75518 | MS.gene050436 | PPI |
| MS.gene27517 | MS.gene050436 | PPI |
| MS.gene75990 | MS.gene050436 | PPI |
| MS.gene022025 | MS.gene050436 | PPI |
| MS.gene78458 | MS.gene050436 | PPI |
| MS.gene071065 | MS.gene050436 | PPI |
| MS.gene067090 | MS.gene050436 | PPI |
| MS.gene87672 | MS.gene050436 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050436.t1 | MTR_7g110000 | 99.309 | 724 | 2 | 1 | 1 | 721 | 1 | 724 | 0.0 | 1476 |
| MS.gene050436.t1 | MTR_3g077670 | 74.538 | 703 | 157 | 8 | 1 | 695 | 1 | 689 | 0.0 | 1012 |
| MS.gene050436.t1 | MTR_2g032690 | 75.193 | 649 | 156 | 2 | 1 | 646 | 1 | 647 | 0.0 | 998 |
| MS.gene050436.t1 | MTR_3g107730 | 57.895 | 684 | 253 | 7 | 7 | 676 | 4 | 666 | 0.0 | 786 |
| MS.gene050436.t1 | MTR_0459s0020 | 59.422 | 658 | 245 | 7 | 1 | 647 | 9 | 655 | 0.0 | 781 |
| MS.gene050436.t1 | MTR_1g011840 | 56.375 | 651 | 260 | 4 | 7 | 647 | 3 | 639 | 0.0 | 750 |
| MS.gene050436.t1 | MTR_3g107730 | 62.715 | 523 | 182 | 3 | 7 | 529 | 4 | 513 | 0.0 | 688 |
| MS.gene050436.t1 | MTR_0366s0020 | 54.351 | 655 | 199 | 6 | 1 | 647 | 9 | 571 | 0.0 | 679 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050436.t1 | AT3G62270 | 82.260 | 699 | 109 | 5 | 1 | 694 | 1 | 689 | 0.0 | 1168 |
| MS.gene050436.t1 | AT2G47160 | 80.305 | 721 | 121 | 8 | 1 | 717 | 1 | 704 | 0.0 | 1147 |
| MS.gene050436.t1 | AT2G47160 | 77.614 | 746 | 121 | 9 | 1 | 717 | 1 | 729 | 0.0 | 1134 |
| MS.gene050436.t1 | AT3G06450 | 72.377 | 648 | 168 | 5 | 3 | 646 | 5 | 645 | 0.0 | 975 |
| MS.gene050436.t1 | AT3G06450 | 72.377 | 648 | 168 | 5 | 3 | 646 | 5 | 645 | 0.0 | 975 |
| MS.gene050436.t1 | AT3G06450 | 72.377 | 648 | 168 | 5 | 3 | 646 | 5 | 645 | 0.0 | 975 |
| MS.gene050436.t1 | AT3G06450 | 72.377 | 648 | 168 | 5 | 3 | 646 | 5 | 645 | 0.0 | 975 |
| MS.gene050436.t1 | AT1G15460 | 60.030 | 663 | 250 | 7 | 8 | 660 | 13 | 670 | 0.0 | 821 |
| MS.gene050436.t1 | AT1G15460 | 60.030 | 663 | 250 | 7 | 8 | 660 | 13 | 670 | 0.0 | 821 |
| MS.gene050436.t1 | AT1G15460 | 62.397 | 609 | 224 | 3 | 8 | 615 | 13 | 617 | 0.0 | 806 |
| MS.gene050436.t1 | AT1G74810 | 57.447 | 658 | 265 | 5 | 1 | 647 | 1 | 654 | 0.0 | 790 |
| MS.gene050436.t1 | AT1G74810 | 57.447 | 658 | 265 | 5 | 1 | 647 | 1 | 654 | 0.0 | 790 |
| MS.gene050436.t1 | AT1G74810 | 57.447 | 658 | 265 | 5 | 1 | 647 | 1 | 654 | 0.0 | 790 |
| MS.gene050436.t1 | AT5G25430 | 56.269 | 670 | 265 | 10 | 7 | 661 | 9 | 665 | 0.0 | 768 |
| MS.gene050436.t1 | AT1G74810 | 58.158 | 619 | 249 | 4 | 35 | 647 | 8 | 622 | 0.0 | 752 |
| MS.gene050436.t1 | AT1G74810 | 58.158 | 619 | 249 | 4 | 35 | 647 | 8 | 622 | 0.0 | 752 |
| MS.gene050436.t1 | AT4G32510 | 53.869 | 685 | 286 | 6 | 1 | 665 | 1 | 675 | 0.0 | 750 |
| MS.gene050436.t1 | AT4G32510 | 54.303 | 674 | 279 | 5 | 1 | 655 | 1 | 664 | 0.0 | 749 |
| MS.gene050436.t1 | AT1G15460 | 57.996 | 569 | 224 | 7 | 102 | 660 | 1 | 564 | 0.0 | 671 |
| MS.gene050436.t1 | AT1G74810 | 56.159 | 552 | 232 | 4 | 102 | 647 | 1 | 548 | 0.0 | 646 |
| MS.gene050436.t1 | AT1G74810 | 55.534 | 515 | 219 | 4 | 139 | 647 | 1 | 511 | 0.0 | 587 |
Find 169 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGGGCTACTTTGCCTTTA+TGG | 0.123064 | 7.1:-4594690 | MS.gene050436:CDS |
| TCATTATGATTTGCTCCTTT+TGG | 0.138425 | 7.1:-4595479 | MS.gene050436:CDS |
| ACATTATTGTGTGGCCTTAT+TGG | 0.170662 | 7.1:-4595354 | MS.gene050436:CDS |
| TGATTCACTTTACAGGATTT+TGG | 0.172961 | 7.1:-4597250 | MS.gene050436:intron |
| GTTCCTGTTGTGTTCATAAT+TGG | 0.189623 | 7.1:-4595610 | MS.gene050436:CDS |
| AATAATGCTATTGTCTTAAA+AGG | 0.213365 | 7.1:+4594448 | None:intergenic |
| TTGTCTTGGTGTTTGGAATC+AGG | 0.217098 | 7.1:+4593831 | None:intergenic |
| ATTTATCTATTTATATGTTT+TGG | 0.242133 | 7.1:-4594409 | MS.gene050436:CDS |
| TGCTTTGATACTATTCTTAC+TGG | 0.270594 | 7.1:-4596428 | MS.gene050436:CDS |
| ACCTGACAATCTCATTTCTT+TGG | 0.287431 | 7.1:+4593875 | None:intergenic |
| CTATTCTTACTGGCCATCTT+AGG | 0.291093 | 7.1:-4596418 | MS.gene050436:CDS |
| CTTTCCCAAAACTGGTTTCC+AGG | 0.295534 | 7.1:+4594653 | None:intergenic |
| TAAACTTTCAATTGCCATAA+AGG | 0.296865 | 7.1:+4594676 | None:intergenic |
| AATACCAACTTCAGTACTTT+GGG | 0.301075 | 7.1:-4594708 | MS.gene050436:CDS |
| TTATTTCTTGTCTTGGTGTT+TGG | 0.301293 | 7.1:+4593824 | None:intergenic |
| GCGCCGGGCGACCACGGATT+TGG | 0.306746 | 7.1:+4595778 | None:intergenic |
| AAAGGATCCTTTCCCAAAAC+TGG | 0.307317 | 7.1:+4594645 | None:intergenic |
| CATTCAAGCAGCTACGAGTA+TGG | 0.307917 | 7.1:-4594885 | MS.gene050436:CDS |
| AATCTCATTTCTTTGGTCAT+TGG | 0.313846 | 7.1:+4593882 | None:intergenic |
| TTCGCTTTGGTCCTTTCATT+TGG | 0.315725 | 7.1:-4596070 | MS.gene050436:CDS |
| GTTTACCTGGAAACCAGTTT+TGG | 0.316421 | 7.1:-4594658 | MS.gene050436:CDS |
| GGAGTGGAGCTATTGATCTT+TGG | 0.338665 | 7.1:+4594020 | None:intergenic |
| GCAATACCTGTCATTTCATT+TGG | 0.339007 | 7.1:-4597198 | MS.gene050436:CDS |
| GATTTCGTATCTTCTCTCTT+TGG | 0.340460 | 7.1:+4596133 | None:intergenic |
| CGACTATGGTGTGCCACTTA+TGG | 0.341912 | 7.1:-4595875 | MS.gene050436:CDS |
| CTTCGTGGAGGTTTGCTAAT+GGG | 0.346782 | 7.1:-4596096 | MS.gene050436:CDS |
| AAAACATATAAATAGATAAA+TGG | 0.347506 | 7.1:+4594411 | None:intergenic |
| CGTTGTTCCTTTACCTCAAC+AGG | 0.355491 | 7.1:+4594797 | None:intergenic |
| CAAGAAGCCGTGGTGAATTT+AGG | 0.358792 | 7.1:-4594058 | MS.gene050436:CDS |
| CCTTCGTGGAGGTTTGCTAA+TGG | 0.359784 | 7.1:-4596097 | MS.gene050436:CDS |
| AACCGCTTTACCCGAATTGC+GGG | 0.360056 | 7.1:-4596379 | MS.gene050436:CDS |
| TTGGGTAGAAACCTGTTTCT+TGG | 0.364718 | 7.1:-4596867 | MS.gene050436:CDS |
| TCTTAAATTATTTCTTGTCT+TGG | 0.364780 | 7.1:+4593817 | None:intergenic |
| TGCCACTTATGGTCCTAGTT+TGG | 0.369045 | 7.1:-4595864 | MS.gene050436:CDS |
| TGCGGTATGACTCCGTTTGC+AGG | 0.370416 | 7.1:+4595324 | None:intergenic |
| CAAACAACTCTCCCGCAATT+CGG | 0.374938 | 7.1:+4596368 | None:intergenic |
| CGAATTGCGGGAGAGTTGTT+TGG | 0.375063 | 7.1:-4596367 | MS.gene050436:CDS |
| TTCTTTGGTCATTGGACTGT+TGG | 0.381083 | 7.1:+4593890 | None:intergenic |
| GGGAGAAAGTATTGTCTTAG+TGG | 0.386465 | 7.1:+4594328 | None:intergenic |
| TTAGGATCATTTCTTGGTGT+TGG | 0.387898 | 7.1:+4593999 | None:intergenic |
| AAATACCAACTTCAGTACTT+TGG | 0.388661 | 7.1:-4594709 | MS.gene050436:CDS |
| TGCTAATGGGATGTTCGCTT+TGG | 0.391611 | 7.1:-4596083 | MS.gene050436:CDS |
| TTGCAGGAGGAATTCCAATA+AGG | 0.392276 | 7.1:+4595340 | None:intergenic |
| CGCCCGGCGCATATGACAAT+TGG | 0.395913 | 7.1:-4595765 | MS.gene050436:CDS |
| GCACACCATAGTCGGCTATA+AGG | 0.404541 | 7.1:+4595884 | None:intergenic |
| ATCAGTAAGAATGCTAGTTT+AGG | 0.405750 | 7.1:-4595110 | MS.gene050436:CDS |
| CAGCTGCATCCAAGTCTTGA+AGG | 0.411041 | 7.1:+4594284 | None:intergenic |
| TGCTAAAGAAAGACCTGAGT+TGG | 0.415592 | 7.1:-4596886 | MS.gene050436:CDS |
| TGACAATTGGACTGTTGTTA+AGG | 0.417329 | 7.1:-4595752 | MS.gene050436:intron |
| ATATAAATAGATAAATGGTT+TGG | 0.420632 | 7.1:+4594416 | None:intergenic |
| AACCTGTTTCTTGGATGGGC+TGG | 0.422896 | 7.1:-4596858 | MS.gene050436:CDS |
| AGGCGCCTTGGGATACCGTT+TGG | 0.423298 | 7.1:+4595808 | None:intergenic |
| GCTAGTTTAGGACAGTTATA+CGG | 0.423941 | 7.1:-4595098 | MS.gene050436:CDS |
| TGTCTTGGTGTTTGGAATCA+GGG | 0.423999 | 7.1:+4593832 | None:intergenic |
| CATACTCGTAGCTGCTTGAA+TGG | 0.424821 | 7.1:+4594886 | None:intergenic |
| TTGGACTAAAGAGGCGCCTT+GGG | 0.427252 | 7.1:+4595797 | None:intergenic |
| ACCAAAGAAATGAGATTGTC+AGG | 0.428973 | 7.1:-4593876 | MS.gene050436:CDS |
| CTAACTTGGGTACCTATTGC+TGG | 0.436565 | 7.1:-4594385 | MS.gene050436:CDS |
| AGCACTGCAATCATAGTTGC+TGG | 0.439606 | 7.1:+4595577 | None:intergenic |
| GGAAACATGACTCCAGCAAT+AGG | 0.440092 | 7.1:+4594373 | None:intergenic |
| TCGGTGCTGTGAAAAGTAAA+AGG | 0.440388 | 7.1:+4594627 | None:intergenic |
| AAACAACTCTCCCGCAATTC+GGG | 0.442782 | 7.1:+4596369 | None:intergenic |
| CTTGCTTCCTGTTGAGGTAA+AGG | 0.444141 | 7.1:-4594804 | MS.gene050436:CDS |
| AGTCCTCGGTCTGGCGTAAG+AGG | 0.444825 | 7.1:-4593915 | MS.gene050436:CDS |
| TAACTTGCTTCAATCAGTAT+TGG | 0.448829 | 7.1:-4594768 | MS.gene050436:CDS |
| GTAGAAACCTGTTTCTTGGA+TGG | 0.449097 | 7.1:-4596863 | MS.gene050436:CDS |
| GAACAACTAGAGAGAAATAC+TGG | 0.450622 | 7.1:-4597174 | MS.gene050436:intron |
| ATCCAGCCCATCCAAGAAAC+AGG | 0.452822 | 7.1:+4596856 | None:intergenic |
| TAATGTGCTACAAGCAAGAT+TGG | 0.456259 | 7.1:-4597442 | MS.gene050436:CDS |
| CTTCAATCAGTATTGGTTGG+AGG | 0.463638 | 7.1:-4594761 | MS.gene050436:CDS |
| GGAGCTGGTGCTTCTCATAT+CGG | 0.465563 | 7.1:-4594110 | MS.gene050436:CDS |
| AAGGCTAGATCATGGCGTTA+TGG | 0.470484 | 7.1:-4596019 | MS.gene050436:CDS |
| ATGGCAATTGAAAGTTTACC+TGG | 0.470571 | 7.1:-4594671 | MS.gene050436:CDS |
| GCTCCAATTATGAACACAAC+AGG | 0.475392 | 7.1:+4595607 | None:intergenic |
| ATCATTTCTTGGTGTTGGAG+TGG | 0.476671 | 7.1:+4594004 | None:intergenic |
| CTTGGATGCAGCTGAGTATG+AGG | 0.477776 | 7.1:-4594275 | MS.gene050436:CDS |
| TTTGGACTAAAGAGGCGCCT+TGG | 0.478346 | 7.1:+4595796 | None:intergenic |
| TCTAGCAACTCTTAAACATC+AGG | 0.479084 | 7.1:-4595280 | MS.gene050436:intron |
| GGCATTATACACTCAATCAT+TGG | 0.482191 | 7.1:-4596978 | MS.gene050436:CDS |
| AGTCCAAATCCGTGGTCGCC+CGG | 0.483928 | 7.1:-4595781 | MS.gene050436:CDS |
| ATTTACTTGTATCTTCTGCT+CGG | 0.484482 | 7.1:+4594608 | None:intergenic |
| TTGCTTCAATCAGTATTGGT+TGG | 0.485493 | 7.1:-4594764 | MS.gene050436:CDS |
| CGTAGCCTTATAGCCGACTA+TGG | 0.485953 | 7.1:-4595889 | MS.gene050436:CDS |
| TAAGAGGTGTCTGCATTTGA+TGG | 0.489462 | 7.1:+4595057 | None:intergenic |
| TAGAAACCTGTTTCTTGGAT+GGG | 0.489881 | 7.1:-4596862 | MS.gene050436:CDS |
| TCGGGTAAAGCGGTTGATGA+TGG | 0.490490 | 7.1:+4596387 | None:intergenic |
| AGATGACTTGCTTCCTGTTG+AGG | 0.490643 | 7.1:-4594810 | MS.gene050436:CDS |
| GTCCTTGTGCCAGGGACTTG+TGG | 0.493396 | 7.1:-4596170 | MS.gene050436:intron |
| ATTGGAATTCCTCCTGCAAA+CGG | 0.495864 | 7.1:-4595336 | MS.gene050436:CDS |
| GTGGAATCAAAGCAGGTGTA+AGG | 0.505469 | 7.1:-4597415 | MS.gene050436:intron |
| GCTAAAGAAAGACCTGAGTT+GGG | 0.505588 | 7.1:-4596885 | MS.gene050436:CDS |
| AGATCATGGCGTTATGGTAG+TGG | 0.507525 | 7.1:-4596013 | MS.gene050436:intron |
| CTTATGGTCCTAGTTTGGAC+AGG | 0.509478 | 7.1:-4595859 | MS.gene050436:CDS |
| GAGAATTAAAAGAGAGGTGC+GGG | 0.510378 | 7.1:+4593964 | None:intergenic |
| AGAAATGAGATTGTCAGGTA+GGG | 0.510643 | 7.1:-4593871 | MS.gene050436:CDS |
| AAGAGAGGTGCGGGCTCAGA+CGG | 0.517099 | 7.1:+4593973 | None:intergenic |
| CAGCAATCTGAGTTTGGAGC+TGG | 0.517149 | 7.1:-4594125 | MS.gene050436:intron |
| AAGAAATGAGATTGTCAGGT+AGG | 0.518072 | 7.1:-4593872 | MS.gene050436:CDS |
| GATCGACTTACTCGAGCAGA+TGG | 0.522727 | 7.1:+4595023 | None:intergenic |
| AGGACACACCTGTCCAAACT+AGG | 0.523221 | 7.1:+4595851 | None:intergenic |
| TAGCCCCAAAGTACTGAAGT+TGG | 0.525039 | 7.1:+4594704 | None:intergenic |
| GATGGGTCCTGGTAAATAAG+AGG | 0.526245 | 7.1:+4595041 | None:intergenic |
| TTACTCGAGCAGATGGGTCC+TGG | 0.527068 | 7.1:+4595030 | None:intergenic |
| TATGGGAAACGTGGACGCCC+CGG | 0.529193 | 7.1:-4594867 | MS.gene050436:CDS |
| TCAAATATAGTCTCATCGAC+CGG | 0.529909 | 7.1:+4594848 | None:intergenic |
| ACTGAGCAAAGTCCTCGGTC+TGG | 0.531263 | 7.1:-4593924 | MS.gene050436:CDS |
| AGTCCAATTGTCATATGCGC+CGG | 0.534376 | 7.1:+4595762 | None:intergenic |
| ACATATTGAAGTTGATGCCA+AGG | 0.539736 | 7.1:+4597001 | None:intergenic |
| CAAATATAGTCTCATCGACC+GGG | 0.540975 | 7.1:+4594849 | None:intergenic |
| GCTAGACTCTTTGTATGCAT+CGG | 0.543376 | 7.1:+4595297 | None:intergenic |
| ATTCAAGCAGCTACGAGTAT+GGG | 0.543742 | 7.1:-4594884 | MS.gene050436:CDS |
| GCCACTCCTAAAATCAGTAA+AGG | 0.544686 | 7.1:+4596948 | None:intergenic |
| GTCCAATTGTCATATGCGCC+GGG | 0.545574 | 7.1:+4595763 | None:intergenic |
| TGTTCACCAAATGAAATGAC+AGG | 0.550764 | 7.1:+4597192 | None:intergenic |
| AAATCATAATGATAAGAAGA+TGG | 0.551493 | 7.1:+4595490 | None:intergenic |
| TCATTCTTGATACCTTCAAA+AGG | 0.552421 | 7.1:+4597479 | None:intergenic |
| TCTAACAGCTGTTCAAACCT+TGG | 0.553634 | 7.1:-4597018 | MS.gene050436:CDS |
| GTCCAAACTAGGACCATAAG+TGG | 0.562627 | 7.1:+4595862 | None:intergenic |
| TGCTACAAGCAAGATTGGAC+AGG | 0.567931 | 7.1:-4597437 | MS.gene050436:CDS |
| GGTATCAAGAATGATCTAAG+AGG | 0.570702 | 7.1:-4597470 | MS.gene050436:CDS |
| AGGTGCACACCTTCAAGACT+TGG | 0.572324 | 7.1:-4594293 | MS.gene050436:CDS |
| TGGACAGGTGGAATCAAAGC+AGG | 0.574832 | 7.1:-4597422 | MS.gene050436:CDS |
| GAAATGAGATTGTCAGGTAG+GGG | 0.575756 | 7.1:-4593870 | MS.gene050436:CDS |
| TAAGGAGAAGGCCAAATGAA+AGG | 0.576331 | 7.1:+4596059 | None:intergenic |
| CAATATATCTTACCGATGCA+AGG | 0.577470 | 7.1:+4594230 | None:intergenic |
| CAACCGCTTTACCCGAATTG+CGG | 0.578492 | 7.1:-4596380 | MS.gene050436:CDS |
| GATGGAACATGCTCCTAAGA+TGG | 0.580149 | 7.1:+4596405 | None:intergenic |
| ACTAAGAGCATGATCATCAA+AGG | 0.581858 | 7.1:+4594352 | None:intergenic |
| TGTTTCTTGGATGGGCTGGA+TGG | 0.584884 | 7.1:-4596854 | MS.gene050436:intron |
| AAAGCAGAAAGGCTAGATCA+TGG | 0.585011 | 7.1:-4596027 | MS.gene050436:CDS |
| TTGGCATCAACTTCAATATG+TGG | 0.585839 | 7.1:-4596999 | MS.gene050436:CDS |
| TGCTGGAAGACATTATTGTG+TGG | 0.586710 | 7.1:-4595363 | MS.gene050436:intron |
| CATAAGTGGCACACCATAGT+CGG | 0.587251 | 7.1:+4595876 | None:intergenic |
| GCAGACACCTCTTATTTACC+AGG | 0.589449 | 7.1:-4595048 | MS.gene050436:CDS |
| ACCACGGATTTGGACTAAAG+AGG | 0.593964 | 7.1:+4595788 | None:intergenic |
| TGTTTGGAATCAGGGTTGAG+AGG | 0.594019 | 7.1:+4593840 | None:intergenic |
| TTTACCGTTCAACCTTGCAT+CGG | 0.594284 | 7.1:-4594242 | MS.gene050436:intron |
| TCATATGCGCCGGGCGACCA+CGG | 0.597510 | 7.1:+4595772 | None:intergenic |
| AACAGGTTTCTACCCAACTC+AGG | 0.597836 | 7.1:+4596873 | None:intergenic |
| CTCCCGCAATTCGGGTAAAG+CGG | 0.606782 | 7.1:+4596377 | None:intergenic |
| CTTACCGATGCAAGGTTGAA+CGG | 0.608240 | 7.1:+4594238 | None:intergenic |
| TCGCGACTGAGCAAAGTCCT+CGG | 0.608512 | 7.1:-4593929 | MS.gene050436:CDS |
| GGTGCTTCTCATATCGGAGA+AGG | 0.609058 | 7.1:-4594104 | MS.gene050436:CDS |
| ATACCAACTTCAGTACTTTG+GGG | 0.618229 | 7.1:-4594707 | MS.gene050436:CDS |
| CCGTTTGGAACACTTGCAGT+CGG | 0.622641 | 7.1:+4595823 | None:intergenic |
| TCAAGAATGATCTAAGAGGA+AGG | 0.623945 | 7.1:-4597466 | MS.gene050436:CDS |
| CCGACTGCAAGTGTTCCAAA+CGG | 0.624889 | 7.1:-4595823 | MS.gene050436:CDS |
| GTGTTCCAAACGGTATCCCA+AGG | 0.628714 | 7.1:-4595813 | MS.gene050436:CDS |
| AATGTGTACATGATCACAGT+AGG | 0.629188 | 7.1:+4596921 | None:intergenic |
| CTTACTGATACTGTTTCGAG+CGG | 0.639834 | 7.1:+4595124 | None:intergenic |
| GAAGTTATCACAAGAAGCCG+TGG | 0.642922 | 7.1:-4594068 | MS.gene050436:CDS |
| ATTATACACTCAATCATTGG+TGG | 0.645714 | 7.1:-4596975 | MS.gene050436:CDS |
| CGAGAATTAAAAGAGAGGTG+CGG | 0.646333 | 7.1:+4593963 | None:intergenic |
| GTGACAAATGATTAGGCACA+AGG | 0.648110 | 7.1:-4594932 | MS.gene050436:intron |
| TACAAGCAAGATTGGACAGG+TGG | 0.649360 | 7.1:-4597434 | MS.gene050436:CDS |
| ATCGACTTACTCGAGCAGAT+GGG | 0.649721 | 7.1:+4595024 | None:intergenic |
| CTGTTTCAACAAAAGTAGCA+TGG | 0.650562 | 7.1:+4594473 | None:intergenic |
| GCCTCTTTAGTCCAAATCCG+TGG | 0.651698 | 7.1:-4595789 | MS.gene050436:CDS |
| AACACTTGCAGTCGGCATGT+AGG | 0.670569 | 7.1:+4595831 | None:intergenic |
| TTTGTATGCATCGGAGACTG+CGG | 0.679679 | 7.1:+4595306 | None:intergenic |
| AAATATAGTCTCATCGACCG+GGG | 0.685107 | 7.1:+4594850 | None:intergenic |
| GGTATGACTCCGTTTGCAGG+AGG | 0.685848 | 7.1:+4595327 | None:intergenic |
| GTGCCTCTTACGCCAGACCG+AGG | 0.694511 | 7.1:+4593912 | None:intergenic |
| TAGTATGCCTAAATTCACCA+CGG | 0.697327 | 7.1:+4594051 | None:intergenic |
| CCACACGAGAATTAAAAGAG+AGG | 0.699754 | 7.1:+4593958 | None:intergenic |
| AGCTACGAGTATGGGAAACG+TGG | 0.712689 | 7.1:-4594876 | MS.gene050436:CDS |
| TTATTACTTTGACCACAGTG+TGG | 0.712922 | 7.1:-4595554 | MS.gene050436:CDS |
| CCATTAGCAAACCTCCACGA+AGG | 0.724265 | 7.1:+4596097 | None:intergenic |
| AAAGCTGAGATGCCACACTG+TGG | 0.814882 | 7.1:+4595542 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACATATAAATAGATAAA+TGG | + | chr7.1:4596913-4596932 | None:intergenic | 10.0% |
| !! | AACATTATTTATTAAAAAGA+TGG | - | chr7.1:4595623-4595642 | MS.gene050436:CDS | 10.0% |
| !!! | ATTTATCTATTTATATGTTT+TGG | - | chr7.1:4596912-4596931 | MS.gene050436:CDS | 10.0% |
| !!! | TAACTATAAGTATATTATTT+TGG | - | chr7.1:4594193-4594212 | MS.gene050436:intron | 10.0% |
| !!! | TTAAATCTTTGTTTAATATA+TGG | - | chr7.1:4596352-4596371 | MS.gene050436:CDS | 10.0% |
| !! | ATATAAATAGATAAATGGTT+TGG | + | chr7.1:4596908-4596927 | None:intergenic | 15.0% |
| !! | TATGAAAGTTATATTTCAAT+TGG | + | chr7.1:4594044-4594063 | None:intergenic | 15.0% |
| !! | TTTAATAAATAATGTTACAG+TGG | + | chr7.1:4595619-4595638 | None:intergenic | 15.0% |
| !!! | AAATTTTCTTTTAATGTGTA+GGG | - | chr7.1:4596812-4596831 | MS.gene050436:intron | 15.0% |
| !!! | AATAAATTTTAAGAAGGTTT+AGG | + | chr7.1:4596323-4596342 | None:intergenic | 15.0% |
| !!! | ATTATTAACTTGATTTTGTA+GGG | - | chr7.1:4594857-4594876 | MS.gene050436:CDS | 15.0% |
| !!! | ATTTATTTAACTTTAACTAC+AGG | - | chr7.1:4595402-4595421 | MS.gene050436:intron | 15.0% |
| !!! | CAAGAAAATAAATTTTAAGA+AGG | + | chr7.1:4596329-4596348 | None:intergenic | 15.0% |
| !! | AAATCATAATGATAAGAAGA+TGG | + | chr7.1:4595834-4595853 | None:intergenic | 20.0% |
| !! | AATAATGCTATTGTCTTAAA+AGG | + | chr7.1:4596876-4596895 | None:intergenic | 20.0% |
| !! | ATTTATCTATCTATCAATGA+AGG | - | chr7.1:4595073-4595092 | MS.gene050436:CDS | 20.0% |
| !! | CTAAGAGTTATAAATTAATC+AGG | + | chr7.1:4596105-4596124 | None:intergenic | 20.0% |
| !! | TCAAGTTAATAATGAAAACA+AGG | + | chr7.1:4594850-4594869 | None:intergenic | 20.0% |
| !! | TGTAACTAAAAAATGAACAA+TGG | - | chr7.1:4596138-4596157 | MS.gene050436:CDS | 20.0% |
| !! | TTTGGATAAACAACTTAATT+AGG | - | chr7.1:4594559-4594578 | MS.gene050436:intron | 20.0% |
| !!! | AATATGTTGGTAAATAACTT+CGG | + | chr7.1:4595128-4595147 | None:intergenic | 20.0% |
| !!! | AATTAAGTTGTTTATCCAAA+CGG | + | chr7.1:4594559-4594578 | None:intergenic | 20.0% |
| !!! | ACTTAATTAGGTTTTGTTAT+TGG | - | chr7.1:4594571-4594590 | MS.gene050436:intron | 20.0% |
| !!! | ATATGTTTTCATAAAGGAAA+AGG | - | chr7.1:4594217-4594236 | MS.gene050436:intron | 20.0% |
| !!! | CAAATTTTCTTTTAATGTGT+AGG | - | chr7.1:4596811-4596830 | MS.gene050436:intron | 20.0% |
| !!! | CATTATTAACTTGATTTTGT+AGG | - | chr7.1:4594856-4594875 | MS.gene050436:CDS | 20.0% |
| !!! | TTGCTTAATTCTTTTTCTAA+TGG | - | chr7.1:4595919-4595938 | MS.gene050436:intron | 20.0% |
| !!! | TTTGGAATATGTTTTCATAA+AGG | - | chr7.1:4594211-4594230 | MS.gene050436:intron | 20.0% |
| !!! | TTTTTTTTTTCTTTCTGAAC+AGG | - | chr7.1:4595677-4595696 | MS.gene050436:intron | 20.0% |
| ! | AAAAAATATGTATGTTGTGG+GGG | + | chr7.1:4594097-4594116 | None:intergenic | 25.0% |
| ! | AGAAAAAGAATTAAGCAAGT+TGG | + | chr7.1:4595917-4595936 | None:intergenic | 25.0% |
| ! | AGCAAAAAATATGTATGTTG+TGG | + | chr7.1:4594100-4594119 | None:intergenic | 25.0% |
| ! | CAAAAAATATGTATGTTGTG+GGG | + | chr7.1:4594098-4594117 | None:intergenic | 25.0% |
| ! | GATAGCTTATAAAAGAAGTT+TGG | + | chr7.1:4594664-4594683 | None:intergenic | 25.0% |
| ! | GCAAAAAATATGTATGTTGT+GGG | + | chr7.1:4594099-4594118 | None:intergenic | 25.0% |
| ! | TAAACTTTCAATTGCCATAA+AGG | + | chr7.1:4596648-4596667 | None:intergenic | 25.0% |
| ! | TAATAATGAAAACAAGGCAA+TGG | + | chr7.1:4594844-4594863 | None:intergenic | 25.0% |
| !! | AATAAGTTGAAAACAGCTTA+TGG | - | chr7.1:4594700-4594719 | MS.gene050436:CDS | 25.0% |
| !! | ACTTCTTTTATAAGCTATCA+TGG | - | chr7.1:4594665-4594684 | MS.gene050436:CDS | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+GGG | + | chr7.1:4594558-4594577 | None:intergenic | 25.0% |
| !! | ATTTAACTTTAACTACAGGT+TGG | - | chr7.1:4595406-4595425 | MS.gene050436:intron | 25.0% |
| !!! | AAATAAGGACATGTTTTGAT+TGG | + | chr7.1:4594789-4594808 | None:intergenic | 25.0% |
| !!! | AATGTTTTGATTCACTTTAC+AGG | - | chr7.1:4594064-4594083 | MS.gene050436:CDS | 25.0% |
| !!! | TATATGTTTTGGACTAACTT+GGG | - | chr7.1:4596923-4596942 | MS.gene050436:CDS | 25.0% |
| !!! | TTATATGTTTTGGACTAACT+TGG | - | chr7.1:4596922-4596941 | MS.gene050436:CDS | 25.0% |
| AAATACCAACTTCAGTACTT+TGG | - | chr7.1:4596612-4596631 | MS.gene050436:intron | 30.0% | |
| AAGCTATCATGGATAACTTA+TGG | - | chr7.1:4594676-4594695 | MS.gene050436:CDS | 30.0% | |
| AATACCAACTTCAGTACTTT+GGG | - | chr7.1:4596613-4596632 | MS.gene050436:intron | 30.0% | |
| AATCTCATTTCTTTGGTCAT+TGG | + | chr7.1:4597442-4597461 | None:intergenic | 30.0% | |
| ACAGCACTAGAACATAAATA+AGG | + | chr7.1:4594804-4594823 | None:intergenic | 30.0% | |
| AGTTGGAAGTTTAATGAACT+AGG | + | chr7.1:4595900-4595919 | None:intergenic | 30.0% | |
| ATTATACACTCAATCATTGG+TGG | - | chr7.1:4594346-4594365 | MS.gene050436:CDS | 30.0% | |
| ATTTACTTGTATCTTCTGCT+CGG | + | chr7.1:4596716-4596735 | None:intergenic | 30.0% | |
| GTATAATTCATGTTTCTTGC+TGG | - | chr7.1:4595941-4595960 | MS.gene050436:intron | 30.0% | |
| GTTTAATATATGGCATGTGT+TGG | - | chr7.1:4596362-4596381 | MS.gene050436:CDS | 30.0% | |
| TACTGCATTAAAAAGCAGAA+AGG | - | chr7.1:4595283-4595302 | MS.gene050436:CDS | 30.0% | |
| TCATTCTTGATACCTTCAAA+AGG | + | chr7.1:4593845-4593864 | None:intergenic | 30.0% | |
| TGACACTGTTTGTAATCATT+TGG | - | chr7.1:4595364-4595383 | MS.gene050436:intron | 30.0% | |
| TGCTTTGATACTATTCTTAC+TGG | - | chr7.1:4594893-4594912 | MS.gene050436:CDS | 30.0% | |
| TGGTATTGTGACAAATGATT+AGG | - | chr7.1:4596382-4596401 | MS.gene050436:CDS | 30.0% | |
| TTATCTACTGATATAAGCAC+TGG | + | chr7.1:4594755-4594774 | None:intergenic | 30.0% | |
| ! | ATCAGTAAGAATGCTAGTTT+AGG | - | chr7.1:4596211-4596230 | MS.gene050436:intron | 30.0% |
| ! | GAAACATTTGTACCTTTTGA+AGG | - | chr7.1:4593830-4593849 | MS.gene050436:CDS | 30.0% |
| ! | GTTGGTATTTTCTTGAGAAT+AGG | + | chr7.1:4596602-4596621 | None:intergenic | 30.0% |
| ! | TATTTTCTTGAGAATAGGCA+TGG | + | chr7.1:4596597-4596616 | None:intergenic | 30.0% |
| ! | TGATTCACTTTACAGGATTT+TGG | - | chr7.1:4594071-4594090 | MS.gene050436:CDS | 30.0% |
| ! | TGTGCACCTTTGAAAAATTT+GGG | + | chr7.1:4597017-4597036 | None:intergenic | 30.0% |
| ! | TTTTCTTTCTGAACAGGATA+TGG | - | chr7.1:4595683-4595702 | MS.gene050436:intron | 30.0% |
| ! | TTTTTAATGCAGTAAGGAGA+AGG | + | chr7.1:4595277-4595296 | None:intergenic | 30.0% |
| !! | TAACTTGCTTCAATCAGTAT+TGG | - | chr7.1:4596553-4596572 | MS.gene050436:intron | 30.0% |
| !! | TTATTTCTTGTCTTGGTGTT+TGG | + | chr7.1:4597500-4597519 | None:intergenic | 30.0% |
| !! | TTTCTCCCCAAATTTTTCAA+AGG | - | chr7.1:4597008-4597027 | MS.gene050436:CDS | 30.0% |
| !!! | CATTATGATTTGCTCCTTTT+GGG | - | chr7.1:4595843-4595862 | MS.gene050436:CDS | 30.0% |
| !!! | TCATTATGATTTGCTCCTTT+TGG | - | chr7.1:4595842-4595861 | MS.gene050436:CDS | 30.0% |
| !!! | TTCTGCTTTTTAATGCAGTA+AGG | + | chr7.1:4595283-4595302 | None:intergenic | 30.0% |
| AAACGGGACCTAAATGTATA+GGG | + | chr7.1:4594542-4594561 | None:intergenic | 35.0% | |
| AAGAAATGAGATTGTCAGGT+AGG | - | chr7.1:4597449-4597468 | MS.gene050436:CDS | 35.0% | |
| AATGTGTACATGATCACAGT+AGG | + | chr7.1:4594403-4594422 | None:intergenic | 35.0% | |
| ACCAAAGAAATGAGATTGTC+AGG | - | chr7.1:4597445-4597464 | MS.gene050436:CDS | 35.0% | |
| ACCTGACAATCTCATTTCTT+TGG | + | chr7.1:4597449-4597468 | None:intergenic | 35.0% | |
| AGAAATGAGATTGTCAGGTA+GGG | - | chr7.1:4597450-4597469 | MS.gene050436:CDS | 35.0% | |
| ATACCAACTTCAGTACTTTG+GGG | - | chr7.1:4596614-4596633 | MS.gene050436:intron | 35.0% | |
| ATGGCAATTGAAAGTTTACC+TGG | - | chr7.1:4596650-4596669 | MS.gene050436:intron | 35.0% | |
| CAATATATCTTACCGATGCA+AGG | + | chr7.1:4597094-4597113 | None:intergenic | 35.0% | |
| CTGTTTCAACAAAAGTAGCA+TGG | + | chr7.1:4596851-4596870 | None:intergenic | 35.0% | |
| GAACAACTAGAGAGAAATAC+TGG | - | chr7.1:4594147-4594166 | MS.gene050436:intron | 35.0% | |
| GATTAACAGCAATCTGAGTT+TGG | - | chr7.1:4597190-4597209 | MS.gene050436:CDS | 35.0% | |
| GATTTCGTATCTTCTCTCTT+TGG | + | chr7.1:4595191-4595210 | None:intergenic | 35.0% | |
| GGCATTATACACTCAATCAT+TGG | - | chr7.1:4594343-4594362 | MS.gene050436:CDS | 35.0% | |
| GGTATCAAGAATGATCTAAG+AGG | - | chr7.1:4593851-4593870 | MS.gene050436:CDS | 35.0% | |
| GTCATACCAAAAATCCCAAA+AGG | + | chr7.1:4595860-4595879 | None:intergenic | 35.0% | |
| GTTCCTGTTGTGTTCATAAT+TGG | - | chr7.1:4595711-4595730 | MS.gene050436:intron | 35.0% | |
| TAATGTGCTACAAGCAAGAT+TGG | - | chr7.1:4593879-4593898 | MS.gene050436:CDS | 35.0% | |
| TAGTATGCCTAAATTCACCA+CGG | + | chr7.1:4597273-4597292 | None:intergenic | 35.0% | |
| TCAAATATAGTCTCATCGAC+CGG | + | chr7.1:4596476-4596495 | None:intergenic | 35.0% | |
| TCAAGAATGATCTAAGAGGA+AGG | - | chr7.1:4593855-4593874 | MS.gene050436:CDS | 35.0% | |
| TCTAGCAACTCTTAAACATC+AGG | - | chr7.1:4596041-4596060 | MS.gene050436:CDS | 35.0% | |
| TGACAATTGGACTGTTGTTA+AGG | - | chr7.1:4595569-4595588 | MS.gene050436:CDS | 35.0% | |
| TGTTCACCAAATGAAATGAC+AGG | + | chr7.1:4594132-4594151 | None:intergenic | 35.0% | |
| TTATTACTTTGACCACAGTG+TGG | - | chr7.1:4595767-4595786 | MS.gene050436:CDS | 35.0% | |
| TTGGCATCAACTTCAATATG+TGG | - | chr7.1:4594322-4594341 | MS.gene050436:CDS | 35.0% | |
| ! | ACTAAGAGCATGATCATCAA+AGG | + | chr7.1:4596972-4596991 | None:intergenic | 35.0% |
| ! | CAATTGAGTTTTTACCTTCG+TGG | - | chr7.1:4595210-4595229 | MS.gene050436:intron | 35.0% |
| ! | GATTTTGTAGGGTATGTGTA+TGG | - | chr7.1:4594868-4594887 | MS.gene050436:CDS | 35.0% |
| ! | GCAATACCTGTCATTTCATT+TGG | - | chr7.1:4594123-4594142 | MS.gene050436:intron | 35.0% |
| ! | GCTAGTTTAGGACAGTTATA+CGG | - | chr7.1:4596223-4596242 | MS.gene050436:intron | 35.0% |
| ! | GTGCACCTTTGAAAAATTTG+GGG | + | chr7.1:4597016-4597035 | None:intergenic | 35.0% |
| ! | GTGTGCACCTTTGAAAAATT+TGG | + | chr7.1:4597018-4597037 | None:intergenic | 35.0% |
| ! | GTTTTACTTCTCCATGTTTC+CGG | - | chr7.1:4594515-4594534 | MS.gene050436:intron | 35.0% |
| ! | TAGAAACCTGTTTCTTGGAT+GGG | - | chr7.1:4594459-4594478 | MS.gene050436:CDS | 35.0% |
| ! | TTAGGATCATTTCTTGGTGT+TGG | + | chr7.1:4597325-4597344 | None:intergenic | 35.0% |
| ! | TTTACCTGGAAACCAGTTTT+GGG | - | chr7.1:4596664-4596683 | MS.gene050436:intron | 35.0% |
| !! | ACATATTGAAGTTGATGCCA+AGG | + | chr7.1:4594323-4594342 | None:intergenic | 35.0% |
| !! | ACATTATTGTGTGGCCTTAT+TGG | - | chr7.1:4595967-4595986 | MS.gene050436:intron | 35.0% |
| !! | CTCTCTTTTAATTCTCGTGT+GGG | - | chr7.1:4597364-4597383 | MS.gene050436:intron | 35.0% |
| !! | GTTGATTTGATACTTGCAGA+GGG | - | chr7.1:4594277-4594296 | MS.gene050436:CDS | 35.0% |
| !! | TGTTGATTTGATACTTGCAG+AGG | - | chr7.1:4594276-4594295 | MS.gene050436:CDS | 35.0% |
| !! | TTGCTTCAATCAGTATTGGT+TGG | - | chr7.1:4596557-4596576 | MS.gene050436:intron | 35.0% |
| !!! | ACCTTTACTGATTTTAGGAG+TGG | - | chr7.1:4594372-4594391 | MS.gene050436:CDS | 35.0% |
| !!! | GGTCAACCTTTACTGATTTT+AGG | - | chr7.1:4594367-4594386 | MS.gene050436:CDS | 35.0% |
| !!! | TTTGCTCCTTTTGGGATTTT+TGG | - | chr7.1:4595851-4595870 | MS.gene050436:CDS | 35.0% |
| AAAGCAGAAAGGCTAGATCA+TGG | - | chr7.1:4595294-4595313 | MS.gene050436:CDS | 40.0% | |
| AAAGGATCCTTTCCCAAAAC+TGG | + | chr7.1:4596679-4596698 | None:intergenic | 40.0% | |
| AAATATAGTCTCATCGACCG+GGG | + | chr7.1:4596474-4596493 | None:intergenic | 40.0% | |
| AACGGGACCTAAATGTATAG+GGG | + | chr7.1:4594541-4594560 | None:intergenic | 40.0% | |
| ATATTGTTGTCCTTGTGCCA+GGG | - | chr7.1:4595143-4595162 | MS.gene050436:CDS | 40.0% | |
| ATTCAAGCAGCTACGAGTAT+GGG | - | chr7.1:4596437-4596456 | MS.gene050436:CDS | 40.0% | |
| ATTGGAATTCCTCCTGCAAA+CGG | - | chr7.1:4595985-4596004 | MS.gene050436:intron | 40.0% | |
| CAAACGGGACCTAAATGTAT+AGG | + | chr7.1:4594543-4594562 | None:intergenic | 40.0% | |
| CAAATATAGTCTCATCGACC+GGG | + | chr7.1:4596475-4596494 | None:intergenic | 40.0% | |
| CCACACGAGAATTAAAAGAG+AGG | + | chr7.1:4597366-4597385 | None:intergenic | 40.0% | |
| CGAGAATTAAAAGAGAGGTG+CGG | + | chr7.1:4597361-4597380 | None:intergenic | 40.0% | |
| CTATACATTTAGGTCCCGTT+TGG | - | chr7.1:4594541-4594560 | MS.gene050436:intron | 40.0% | |
| CTATTCTTACTGGCCATCTT+AGG | - | chr7.1:4594903-4594922 | MS.gene050436:CDS | 40.0% | |
| CTTACTGATACTGTTTCGAG+CGG | + | chr7.1:4596200-4596219 | None:intergenic | 40.0% | |
| GAAATGAGATTGTCAGGTAG+GGG | - | chr7.1:4597451-4597470 | MS.gene050436:CDS | 40.0% | |
| GCACAAGGACAACAATATGT+TGG | + | chr7.1:4595141-4595160 | None:intergenic | 40.0% | |
| GCCACTCCTAAAATCAGTAA+AGG | + | chr7.1:4594376-4594395 | None:intergenic | 40.0% | |
| GCTAAAGAAAGACCTGAGTT+GGG | - | chr7.1:4594436-4594455 | MS.gene050436:CDS | 40.0% | |
| GCTAGACTCTTTGTATGCAT+CGG | + | chr7.1:4596027-4596046 | None:intergenic | 40.0% | |
| GCTCCAATTATGAACACAAC+AGG | + | chr7.1:4595717-4595736 | None:intergenic | 40.0% | |
| GTGACAAATGATTAGGCACA+AGG | - | chr7.1:4596389-4596408 | MS.gene050436:CDS | 40.0% | |
| TAAGGAGAAGGCCAAATGAA+AGG | + | chr7.1:4595265-4595284 | None:intergenic | 40.0% | |
| TCTAACAGCTGTTCAAACCT+TGG | - | chr7.1:4594303-4594322 | MS.gene050436:CDS | 40.0% | |
| TGCTAAAGAAAGACCTGAGT+TGG | - | chr7.1:4594435-4594454 | MS.gene050436:CDS | 40.0% | |
| TGCTGGAAGACATTATTGTG+TGG | - | chr7.1:4595958-4595977 | MS.gene050436:intron | 40.0% | |
| TTCGCTTTGGTCCTTTCATT+TGG | - | chr7.1:4595251-4595270 | MS.gene050436:intron | 40.0% | |
| TTCTTTGGTCATTGGACTGT+TGG | + | chr7.1:4597434-4597453 | None:intergenic | 40.0% | |
| TTGCAGGAGGAATTCCAATA+AGG | + | chr7.1:4595984-4596003 | None:intergenic | 40.0% | |
| TTTACCGTTCAACCTTGCAT+CGG | - | chr7.1:4597079-4597098 | MS.gene050436:intron | 40.0% | |
| ! | GAGAATTAAAAGAGAGGTGC+GGG | + | chr7.1:4597360-4597379 | None:intergenic | 40.0% |
| ! | GTAGAAACCTGTTTCTTGGA+TGG | - | chr7.1:4594458-4594477 | MS.gene050436:CDS | 40.0% |
| ! | GTTTACCTGGAAACCAGTTT+TGG | - | chr7.1:4596663-4596682 | MS.gene050436:intron | 40.0% |
| ! | TTGAGTTTTTACCTTCGTGG+AGG | - | chr7.1:4595213-4595232 | MS.gene050436:intron | 40.0% |
| ! | TTGGGTAGAAACCTGTTTCT+TGG | - | chr7.1:4594454-4594473 | MS.gene050436:CDS | 40.0% |
| !! | ATCATTTCTTGGTGTTGGAG+TGG | + | chr7.1:4597320-4597339 | None:intergenic | 40.0% |
| !! | CCTCTCTTTTAATTCTCGTG+TGG | - | chr7.1:4597363-4597382 | MS.gene050436:intron | 40.0% |
| !! | CTTCAATCAGTATTGGTTGG+AGG | - | chr7.1:4596560-4596579 | MS.gene050436:intron | 40.0% |
| !! | GGGAGAAAGTATTGTCTTAG+TGG | + | chr7.1:4596996-4597015 | None:intergenic | 40.0% |
| !! | TAAGAGGTGTCTGCATTTGA+TGG | + | chr7.1:4596267-4596286 | None:intergenic | 40.0% |
| !! | TCGGTGCTGTGAAAAGTAAA+AGG | + | chr7.1:4596697-4596716 | None:intergenic | 40.0% |
| !! | TGTCTTGGTGTTTGGAATCA+GGG | + | chr7.1:4597492-4597511 | None:intergenic | 40.0% |
| !! | TTGTCTTGGTGTTTGGAATC+AGG | + | chr7.1:4597493-4597512 | None:intergenic | 40.0% |
| !!! | CGGCTTTTAGGATCATTTCT+TGG | + | chr7.1:4597331-4597350 | None:intergenic | 40.0% |
| AAACAACTCTCCCGCAATTC+GGG | + | chr7.1:4594955-4594974 | None:intergenic | 45.0% | |
| AACAGGTTTCTACCCAACTC+AGG | + | chr7.1:4594451-4594470 | None:intergenic | 45.0% | |
| AAGGCTAGATCATGGCGTTA+TGG | - | chr7.1:4595302-4595321 | MS.gene050436:CDS | 45.0% | |
| ACCACGGATTTGGACTAAAG+AGG | + | chr7.1:4595536-4595555 | None:intergenic | 45.0% | |
| AGATCATGGCGTTATGGTAG+TGG | - | chr7.1:4595308-4595327 | MS.gene050436:CDS | 45.0% | |
| AGCACTGCAATCATAGTTGC+TGG | + | chr7.1:4595747-4595766 | None:intergenic | 45.0% | |
| AGTCCAATTGTCATATGCGC+CGG | + | chr7.1:4595562-4595581 | None:intergenic | 45.0% | |
| CAAACAACTCTCCCGCAATT+CGG | + | chr7.1:4594956-4594975 | None:intergenic | 45.0% | |
| CAAGAAGCCGTGGTGAATTT+AGG | - | chr7.1:4597263-4597282 | MS.gene050436:intron | 45.0% | |
| CATAAGTGGCACACCATAGT+CGG | + | chr7.1:4595448-4595467 | None:intergenic | 45.0% | |
| CATACTCGTAGCTGCTTGAA+TGG | + | chr7.1:4596438-4596457 | None:intergenic | 45.0% | |
| CATATTGTTGTCCTTGTGCC+AGG | - | chr7.1:4595142-4595161 | MS.gene050436:CDS | 45.0% | |
| CATTCAAGCAGCTACGAGTA+TGG | - | chr7.1:4596436-4596455 | MS.gene050436:CDS | 45.0% | |
| CGTTGTTCCTTTACCTCAAC+AGG | + | chr7.1:4596527-4596546 | None:intergenic | 45.0% | |
| CTAACTTGGGTACCTATTGC+TGG | - | chr7.1:4596936-4596955 | MS.gene050436:CDS | 45.0% | |
| CTTACCGATGCAAGGTTGAA+CGG | + | chr7.1:4597086-4597105 | None:intergenic | 45.0% | |
| CTTATGGTCCTAGTTTGGAC+AGG | - | chr7.1:4595462-4595481 | MS.gene050436:intron | 45.0% | |
| CTTGCTTCCTGTTGAGGTAA+AGG | - | chr7.1:4596517-4596536 | MS.gene050436:intron | 45.0% | |
| GAAGTTATCACAAGAAGCCG+TGG | - | chr7.1:4597253-4597272 | MS.gene050436:intron | 45.0% | |
| GATGGAACATGCTCCTAAGA+TGG | + | chr7.1:4594919-4594938 | None:intergenic | 45.0% | |
| GATGGGTCCTGGTAAATAAG+AGG | + | chr7.1:4596283-4596302 | None:intergenic | 45.0% | |
| GGAAACATGACTCCAGCAAT+AGG | + | chr7.1:4596951-4596970 | None:intergenic | 45.0% | |
| GGAGTGGAGCTATTGATCTT+TGG | + | chr7.1:4597304-4597323 | None:intergenic | 45.0% | |
| GTCCAAACTAGGACCATAAG+TGG | + | chr7.1:4595462-4595481 | None:intergenic | 45.0% | |
| GTGGAATCAAAGCAGGTGTA+AGG | - | chr7.1:4593906-4593925 | MS.gene050436:CDS | 45.0% | |
| TACAAGCAAGATTGGACAGG+TGG | - | chr7.1:4593887-4593906 | MS.gene050436:CDS | 45.0% | |
| TGCTAATGGGATGTTCGCTT+TGG | - | chr7.1:4595238-4595257 | MS.gene050436:intron | 45.0% | |
| TGCTACAAGCAAGATTGGAC+AGG | - | chr7.1:4593884-4593903 | MS.gene050436:CDS | 45.0% | |
| TGTCATGTTGCAGAGACAGT+CGG | + | chr7.1:4595349-4595368 | None:intergenic | 45.0% | |
| TTTCCGGCCCCTATACATTT+AGG | - | chr7.1:4594531-4594550 | MS.gene050436:intron | 45.0% | |
| TTTGTATGCATCGGAGACTG+CGG | + | chr7.1:4596018-4596037 | None:intergenic | 45.0% | |
| ! | ATCGACTTACTCGAGCAGAT+GGG | + | chr7.1:4596300-4596319 | None:intergenic | 45.0% |
| ! | CTTTCCCAAAACTGGTTTCC+AGG | + | chr7.1:4596671-4596690 | None:intergenic | 45.0% |
| ! | GCAGACACCTCTTATTTACC+AGG | - | chr7.1:4596273-4596292 | MS.gene050436:intron | 45.0% |
| ! | TGCCACTTATGGTCCTAGTT+TGG | - | chr7.1:4595457-4595476 | MS.gene050436:intron | 45.0% |
| ! | TGTTTGGAATCAGGGTTGAG+AGG | + | chr7.1:4597484-4597503 | None:intergenic | 45.0% |
| ! | TTGGGGCTACTTTGCCTTTA+TGG | - | chr7.1:4596631-4596650 | MS.gene050436:intron | 45.0% |
| !! | AGATGACTTGCTTCCTGTTG+AGG | - | chr7.1:4596511-4596530 | MS.gene050436:intron | 45.0% |
| !! | CTTCGTGGAGGTTTGCTAAT+GGG | - | chr7.1:4595225-4595244 | MS.gene050436:intron | 45.0% |
| !! | TAGCCCCAAAGTACTGAAGT+TGG | + | chr7.1:4596620-4596639 | None:intergenic | 45.0% |
| !!! | CTGGAAACCAGTTTTGGGAA+AGG | - | chr7.1:4596669-4596688 | MS.gene050436:intron | 45.0% |
| !! | TAAACATTTATATATTAAAT+TGG | + | chr7.1:4596758-4596777 | None:intergenic | 5.0% |
| AAAGCTGAGATGCCACACTG+TGG | + | chr7.1:4595782-4595801 | None:intergenic | 50.0% | |
| AACACTTGCAGTCGGCATGT+AGG | + | chr7.1:4595493-4595512 | None:intergenic | 50.0% | |
| AACCGCTTTACCCGAATTGC+GGG | - | chr7.1:4594942-4594961 | MS.gene050436:intron | 50.0% | |
| AGCTACGAGTATGGGAAACG+TGG | - | chr7.1:4596445-4596464 | MS.gene050436:CDS | 50.0% | |
| AGGACACACCTGTCCAAACT+AGG | + | chr7.1:4595473-4595492 | None:intergenic | 50.0% | |
| AGGTGCACACCTTCAAGACT+TGG | - | chr7.1:4597028-4597047 | MS.gene050436:CDS | 50.0% | |
| ATCCAGCCCATCCAAGAAAC+AGG | + | chr7.1:4594468-4594487 | None:intergenic | 50.0% | |
| ATGTATAGGGGCCGGAAACA+TGG | + | chr7.1:4594529-4594548 | None:intergenic | 50.0% | |
| CAACCGCTTTACCCGAATTG+CGG | - | chr7.1:4594941-4594960 | MS.gene050436:intron | 50.0% | |
| CAGCTGCATCCAAGTCTTGA+AGG | + | chr7.1:4597040-4597059 | None:intergenic | 50.0% | |
| CCATTAGCAAACCTCCACGA+AGG | + | chr7.1:4595227-4595246 | None:intergenic | 50.0% | |
| CCGACTGCAAGTGTTCCAAA+CGG | - | chr7.1:4595498-4595517 | MS.gene050436:CDS | 50.0% | |
| CGAATTGCGGGAGAGTTGTT+TGG | - | chr7.1:4594954-4594973 | MS.gene050436:intron | 50.0% | |
| CTAGTGCTGTCACTGTCATG+TGG | - | chr7.1:4594814-4594833 | MS.gene050436:CDS | 50.0% | |
| CTTGGATGCAGCTGAGTATG+AGG | - | chr7.1:4597046-4597065 | MS.gene050436:intron | 50.0% | |
| GAAACTCATCCACAAGTCCC+TGG | + | chr7.1:4595163-4595182 | None:intergenic | 50.0% | |
| GCACACCATAGTCGGCTATA+AGG | + | chr7.1:4595440-4595459 | None:intergenic | 50.0% | |
| GCCTCTTTAGTCCAAATCCG+TGG | - | chr7.1:4595532-4595551 | MS.gene050436:CDS | 50.0% | |
| GGACCTAAATGTATAGGGGC+CGG | + | chr7.1:4594537-4594556 | None:intergenic | 50.0% | |
| GGAGCTGGTGCTTCTCATAT+CGG | - | chr7.1:4597211-4597230 | MS.gene050436:CDS | 50.0% | |
| GGTGCTTCTCATATCGGAGA+AGG | - | chr7.1:4597217-4597236 | MS.gene050436:CDS | 50.0% | |
| GTCCAATTGTCATATGCGCC+GGG | + | chr7.1:4595561-4595580 | None:intergenic | 50.0% | |
| GTGTTCCAAACGGTATCCCA+AGG | - | chr7.1:4595508-4595527 | MS.gene050436:CDS | 50.0% | |
| TGGACAGGTGGAATCAAAGC+AGG | - | chr7.1:4593899-4593918 | MS.gene050436:CDS | 50.0% | |
| ! | AACCTGTTTCTTGGATGGGC+TGG | - | chr7.1:4594463-4594482 | MS.gene050436:CDS | 50.0% |
| ! | CAGCAATCTGAGTTTGGAGC+TGG | - | chr7.1:4597196-4597215 | MS.gene050436:CDS | 50.0% |
| ! | CCGTTTGGAACACTTGCAGT+CGG | + | chr7.1:4595501-4595520 | None:intergenic | 50.0% |
| ! | GATCGACTTACTCGAGCAGA+TGG | + | chr7.1:4596301-4596320 | None:intergenic | 50.0% |
| !! | CCTTCGTGGAGGTTTGCTAA+TGG | - | chr7.1:4595224-4595243 | MS.gene050436:intron | 50.0% |
| !! | CGACTATGGTGTGCCACTTA+TGG | - | chr7.1:4595446-4595465 | MS.gene050436:intron | 50.0% |
| !! | CGTAGCCTTATAGCCGACTA+TGG | - | chr7.1:4595432-4595451 | MS.gene050436:intron | 50.0% |
| !! | TCGGGTAAAGCGGTTGATGA+TGG | + | chr7.1:4594937-4594956 | None:intergenic | 50.0% |
| !! | TGTTTCTTGGATGGGCTGGA+TGG | - | chr7.1:4594467-4594486 | MS.gene050436:CDS | 50.0% |
| !! | TTGGACTAAAGAGGCGCCTT+GGG | + | chr7.1:4595527-4595546 | None:intergenic | 50.0% |
| !! | TTTGGACTAAAGAGGCGCCT+TGG | + | chr7.1:4595528-4595547 | None:intergenic | 50.0% |
| ACTGAGCAAAGTCCTCGGTC+TGG | - | chr7.1:4597397-4597416 | MS.gene050436:intron | 55.0% | |
| ATCCACAAGTCCCTGGCACA+AGG | + | chr7.1:4595156-4595175 | None:intergenic | 55.0% | |
| CTCCCGCAATTCGGGTAAAG+CGG | + | chr7.1:4594947-4594966 | None:intergenic | 55.0% | |
| GGTATGACTCCGTTTGCAGG+AGG | + | chr7.1:4595997-4596016 | None:intergenic | 55.0% | |
| TCGCGACTGAGCAAAGTCCT+CGG | - | chr7.1:4597392-4597411 | MS.gene050436:intron | 55.0% | |
| TGCGGTATGACTCCGTTTGC+AGG | + | chr7.1:4596000-4596019 | None:intergenic | 55.0% | |
| TTACTCGAGCAGATGGGTCC+TGG | + | chr7.1:4596294-4596313 | None:intergenic | 55.0% | |
| AGGCGCCTTGGGATACCGTT+TGG | + | chr7.1:4595516-4595535 | None:intergenic | 60.0% | |
| AGTCCAAATCCGTGGTCGCC+CGG | - | chr7.1:4595540-4595559 | MS.gene050436:CDS | 60.0% | |
| AGTCCTCGGTCTGGCGTAAG+AGG | - | chr7.1:4597406-4597425 | MS.gene050436:intron | 60.0% | |
| CGCCCGGCGCATATGACAAT+TGG | - | chr7.1:4595556-4595575 | MS.gene050436:CDS | 60.0% | |
| GTCCTTGTGCCAGGGACTTG+TGG | - | chr7.1:4595151-4595170 | MS.gene050436:CDS | 60.0% | |
| TATGGGAAACGTGGACGCCC+CGG | - | chr7.1:4596454-4596473 | MS.gene050436:intron | 60.0% | |
| ! | AAGAGAGGTGCGGGCTCAGA+CGG | + | chr7.1:4597351-4597370 | None:intergenic | 60.0% |
| ! | TGCGGGCTCAGACGGCTTTT+AGG | + | chr7.1:4597343-4597362 | None:intergenic | 60.0% |
| GTGCCTCTTACGCCAGACCG+AGG | + | chr7.1:4597412-4597431 | None:intergenic | 65.0% | |
| TCATATGCGCCGGGCGACCA+CGG | + | chr7.1:4595552-4595571 | None:intergenic | 65.0% | |
| GCGCCGGGCGACCACGGATT+TGG | + | chr7.1:4595546-4595565 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 4593824 | 4597519 | 4593824 | ID=MS.gene050436 |
| chr7.1 | mRNA | 4593824 | 4597519 | 4593824 | ID=MS.gene050436.t1;Parent=MS.gene050436 |
| chr7.1 | exon | 4597416 | 4597519 | 4597416 | ID=MS.gene050436.t1.exon1;Parent=MS.gene050436.t1 |
| chr7.1 | CDS | 4597416 | 4597519 | 4597416 | ID=cds.MS.gene050436.t1;Parent=MS.gene050436.t1 |
| chr7.1 | exon | 4597175 | 4597257 | 4597175 | ID=MS.gene050436.t1.exon2;Parent=MS.gene050436.t1 |
| chr7.1 | CDS | 4597175 | 4597257 | 4597175 | ID=cds.MS.gene050436.t1;Parent=MS.gene050436.t1 |
| chr7.1 | exon | 4596855 | 4597047 | 4596855 | ID=MS.gene050436.t1.exon3;Parent=MS.gene050436.t1 |
| chr7.1 | CDS | 4596855 | 4597047 | 4596855 | ID=cds.MS.gene050436.t1;Parent=MS.gene050436.t1 |
| chr7.1 | exon | 4596327 | 4596465 | 4596327 | ID=MS.gene050436.t1.exon4;Parent=MS.gene050436.t1 |
| chr7.1 | CDS | 4596327 | 4596465 | 4596327 | ID=cds.MS.gene050436.t1;Parent=MS.gene050436.t1 |
| chr7.1 | exon | 4596014 | 4596179 | 4596014 | ID=MS.gene050436.t1.exon5;Parent=MS.gene050436.t1 |
| chr7.1 | CDS | 4596014 | 4596179 | 4596014 | ID=cds.MS.gene050436.t1;Parent=MS.gene050436.t1 |
| chr7.1 | exon | 4595753 | 4595919 | 4595753 | ID=MS.gene050436.t1.exon6;Parent=MS.gene050436.t1 |
| chr7.1 | CDS | 4595753 | 4595919 | 4595753 | ID=cds.MS.gene050436.t1;Parent=MS.gene050436.t1 |
| chr7.1 | exon | 4595471 | 4595644 | 4595471 | ID=MS.gene050436.t1.exon7;Parent=MS.gene050436.t1 |
| chr7.1 | CDS | 4595471 | 4595644 | 4595471 | ID=cds.MS.gene050436.t1;Parent=MS.gene050436.t1 |
| chr7.1 | exon | 4595281 | 4595376 | 4595281 | ID=MS.gene050436.t1.exon8;Parent=MS.gene050436.t1 |
| chr7.1 | CDS | 4595281 | 4595376 | 4595281 | ID=cds.MS.gene050436.t1;Parent=MS.gene050436.t1 |
| chr7.1 | exon | 4595034 | 4595171 | 4595034 | ID=MS.gene050436.t1.exon9;Parent=MS.gene050436.t1 |
| chr7.1 | CDS | 4595034 | 4595171 | 4595034 | ID=cds.MS.gene050436.t1;Parent=MS.gene050436.t1 |
| chr7.1 | exon | 4594614 | 4594939 | 4594614 | ID=MS.gene050436.t1.exon10;Parent=MS.gene050436.t1 |
| chr7.1 | CDS | 4594614 | 4594939 | 4594614 | ID=cds.MS.gene050436.t1;Parent=MS.gene050436.t1 |
| chr7.1 | exon | 4594243 | 4594510 | 4594243 | ID=MS.gene050436.t1.exon11;Parent=MS.gene050436.t1 |
| chr7.1 | CDS | 4594243 | 4594510 | 4594243 | ID=cds.MS.gene050436.t1;Parent=MS.gene050436.t1 |
| chr7.1 | exon | 4593824 | 4594135 | 4593824 | ID=MS.gene050436.t1.exon12;Parent=MS.gene050436.t1 |
| chr7.1 | CDS | 4593824 | 4594135 | 4593824 | ID=cds.MS.gene050436.t1;Parent=MS.gene050436.t1 |
| Gene Sequence |
| Protein sequence |
