Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063253.t1 | XP_013467029.1 | 93.3 | 344 | 4 | 1 | 1 | 325 | 54 | 397 | 5.90E-179 | 636.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063253.t1 | Q9UKZ1 | 40.4 | 337 | 162 | 10 | 9 | 325 | 123 | 440 | 8.4e-49 | 195.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063253.t1 | A0A072VGA3 | 93.3 | 344 | 4 | 1 | 1 | 325 | 54 | 397 | 4.3e-179 | 636.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051033 | MS.gene063253 | 0.819019 | 1.45E-52 | -1.69E-46 |
| MS.gene053333 | MS.gene063253 | 0.910027 | 2.96E-82 | -1.69E-46 |
| MS.gene053334 | MS.gene063253 | 0.890217 | 1.20E-73 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063253.t1 | MTR_1g041405 | 93.314 | 344 | 4 | 1 | 1 | 325 | 54 | 397 | 0.0 | 652 |
| MS.gene063253.t1 | MTR_1g041405 | 91.919 | 297 | 5 | 1 | 1 | 278 | 54 | 350 | 0.0 | 552 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063253.t1 | AT5G18420 | 54.462 | 325 | 148 | 0 | 1 | 325 | 57 | 381 | 7.88e-130 | 378 |
| MS.gene063253.t1 | AT5G18420 | 54.462 | 325 | 148 | 0 | 1 | 325 | 57 | 381 | 1.29e-129 | 377 |
| MS.gene063253.t1 | AT5G18420 | 54.489 | 323 | 147 | 0 | 3 | 325 | 56 | 378 | 8.11e-129 | 375 |
| MS.gene063253.t1 | AT5G18420 | 50.000 | 278 | 139 | 0 | 1 | 278 | 57 | 334 | 7.08e-100 | 298 |
Find 82 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGAATCTGTATCACAATT+TGG | 0.161000 | 1.3:-24598941 | None:intergenic |
| CACTGCTTCATCTTTATTTC+CGG | 0.181836 | 1.3:-24599709 | None:intergenic |
| AAAATACCTCTTTGCCATTA+TGG | 0.183131 | 1.3:-24598090 | None:intergenic |
| CCCATTTCAGCAATTCCTTT+TGG | 0.204315 | 1.3:+24600996 | MS.gene063253:intron |
| GAGAATTTCAACTGCAATTA+GGG | 0.204802 | 1.3:-24601235 | None:intergenic |
| TGAGAATTTCAACTGCAATT+AGG | 0.207484 | 1.3:-24601236 | None:intergenic |
| AAGGATTTGAAGCCGGATTC+TGG | 0.267414 | 1.3:-24596963 | None:intergenic |
| ATGAATCTGTATCACAATTT+GGG | 0.286687 | 1.3:-24598940 | None:intergenic |
| AAATACCTCTTTGCCATTAT+GGG | 0.291176 | 1.3:-24598089 | None:intergenic |
| ACACGTACCGGCAACTTTCT+TGG | 0.293022 | 1.3:-24601063 | None:intergenic |
| CTTTACAGTACTTGTCAATA+TGG | 0.293533 | 1.3:+24601383 | MS.gene063253:CDS |
| TCTTTAAACAAATGATGATA+TGG | 0.317716 | 1.3:-24598878 | None:intergenic |
| GCGTTTATTCTGCAACTATT+AGG | 0.329631 | 1.3:+24598055 | MS.gene063253:CDS |
| ATAAGCTCGGGGTAGTCATT+AGG | 0.333794 | 1.3:-24599970 | None:intergenic |
| CCAAGTTTAGGCTGTGTTCC+AGG | 0.390651 | 1.3:-24599684 | None:intergenic |
| CCAAGGCTCCCGATACTTGA+TGG | 0.408616 | 1.3:+24599795 | MS.gene063253:CDS |
| ATAATCACCTCTTGCTGTAC+AGG | 0.414225 | 1.3:-24600078 | None:intergenic |
| GGCTTATTCATCCCAGAATC+CGG | 0.414456 | 1.3:+24596951 | MS.gene063253:CDS |
| TATCATCATTTGTTTAAAGA+TGG | 0.424584 | 1.3:+24598881 | MS.gene063253:CDS |
| TAAGCTCGGGGTAGTCATTA+GGG | 0.429964 | 1.3:-24599969 | None:intergenic |
| CCACAGTGATATACAACCTT+TGG | 0.432590 | 1.3:-24601033 | None:intergenic |
| ATGACTACCCCGAGCTTATG+TGG | 0.434285 | 1.3:+24599974 | MS.gene063253:CDS |
| CTAGTAGAGGGGCTGCAGTA+AGG | 0.443465 | 1.3:+24600019 | MS.gene063253:CDS |
| AGGATTTGAAGCCGGATTCT+GGG | 0.445204 | 1.3:-24596962 | None:intergenic |
| TTATTTCCGGTGCCAAGTTT+AGG | 0.450510 | 1.3:-24599696 | None:intergenic |
| ACTGACTCCAAGAAAGTTGC+CGG | 0.464679 | 1.3:+24601056 | MS.gene063253:CDS |
| CCTGGAACACAGCCTAAACT+TGG | 0.467985 | 1.3:+24599684 | MS.gene063253:CDS |
| ATTCAATGGAAGTTGTGAAC+AGG | 0.470837 | 1.3:+24601418 | MS.gene063253:CDS |
| GGACATGAGTCTACATTCAA+TGG | 0.474092 | 1.3:+24601404 | MS.gene063253:CDS |
| TGGAAGGATTGAACCCTCAC+TGG | 0.483292 | 1.3:+24599757 | MS.gene063253:CDS |
| CTTATTGTCAAATATTTCAC+TGG | 0.488068 | 1.3:+24599737 | MS.gene063253:CDS |
| TCAAGTATCGGGAGCCTTGG+TGG | 0.495802 | 1.3:-24599792 | None:intergenic |
| CTTATGAAAGGATTTGAAGC+CGG | 0.499316 | 1.3:-24596970 | None:intergenic |
| GGTGTTGATGTATCCCATAA+TGG | 0.499372 | 1.3:+24598076 | MS.gene063253:CDS |
| CGCTATTAATCTCTCGTTGG+TGG | 0.499459 | 1.3:-24596911 | None:intergenic |
| CTTAATTGCAAAAGCTCAGA+AGG | 0.503092 | 1.3:+24600044 | MS.gene063253:CDS |
| AATAGGTTTGATCAGCGACC+TGG | 0.508059 | 1.3:+24599666 | MS.gene063253:intron |
| ATCGGGAGCCTTGGTGGAAG+AGG | 0.511773 | 1.3:-24599786 | None:intergenic |
| TTACAGGCTTCCTGTCATGA+AGG | 0.511927 | 1.3:+24598013 | MS.gene063253:intron |
| AATGCATACTCTGATATGTC+AGG | 0.512674 | 1.3:-24601276 | None:intergenic |
| TTGTCAAATATTTCACTGGA+AGG | 0.512810 | 1.3:+24599741 | MS.gene063253:CDS |
| TAGTAGAGGGGCTGCAGTAA+GGG | 0.513261 | 1.3:+24600020 | MS.gene063253:CDS |
| ATACCTCGCCATCAAGTATC+GGG | 0.514225 | 1.3:-24599803 | None:intergenic |
| TACAGGCTTCCTGTCATGAA+GGG | 0.514425 | 1.3:+24598014 | MS.gene063253:intron |
| CCATCAAGTATCGGGAGCCT+TGG | 0.519598 | 1.3:-24599795 | None:intergenic |
| ACCATTGTCCCACATAAGCT+CGG | 0.522735 | 1.3:-24599983 | None:intergenic |
| CCATTGTCCCACATAAGCTC+GGG | 0.525577 | 1.3:-24599982 | None:intergenic |
| AATACCTCGCCATCAAGTAT+CGG | 0.543271 | 1.3:-24599804 | None:intergenic |
| TTTATGATAAAGCTTATGAA+AGG | 0.545065 | 1.3:-24596982 | None:intergenic |
| GATCCCGTGCAAGCTCCAAA+AGG | 0.558073 | 1.3:-24601011 | None:intergenic |
| ACTGCAGTTTCTTAAACAGT+CGG | 0.560584 | 1.3:+24598648 | MS.gene063253:intron |
| GGAGCTTGCACGGGATCCAA+AGG | 0.564350 | 1.3:+24601017 | MS.gene063253:CDS |
| AATAAATCATGTTACAGCAA+AGG | 0.565375 | 1.3:-24601535 | None:intergenic |
| TGCTTCAACTGATCTAGTGA+AGG | 0.568307 | 1.3:-24598827 | None:intergenic |
| AATAAAGATGAAGCAGTGGT+TGG | 0.571459 | 1.3:+24599714 | MS.gene063253:CDS |
| ATCATCCTGTGTGAACATCA+AGG | 0.588770 | 1.3:+24601500 | MS.gene063253:CDS |
| AAACGCTATTAATCTCTCGT+TGG | 0.594956 | 1.3:-24596914 | None:intergenic |
| TGAATCTGTATCACAATTTG+GGG | 0.599720 | 1.3:-24598939 | None:intergenic |
| TATTCTCTATCAGGAACTGG+TGG | 0.600122 | 1.3:+24601203 | MS.gene063253:intron |
| ATGTGCGTTGATACTAGTAG+AGG | 0.600614 | 1.3:+24600006 | MS.gene063253:CDS |
| AGCGTTTGCTCTGCTAGTTG+AGG | 0.605843 | 1.3:+24596930 | MS.gene063253:CDS |
| TGACTACCCCGAGCTTATGT+GGG | 0.608574 | 1.3:+24599975 | MS.gene063253:CDS |
| TCTTGCACCTGTACAGCAAG+AGG | 0.609228 | 1.3:+24600071 | MS.gene063253:CDS |
| ACACAGCCTAAACTTGGCAC+CGG | 0.610220 | 1.3:+24599690 | MS.gene063253:CDS |
| CCCGAGCTTATGTGGGACAA+TGG | 0.613988 | 1.3:+24599982 | MS.gene063253:CDS |
| TGTGCGTTGATACTAGTAGA+GGG | 0.616078 | 1.3:+24600007 | MS.gene063253:CDS |
| CGGAAATAAAGATGAAGCAG+TGG | 0.618683 | 1.3:+24599710 | MS.gene063253:CDS |
| GCTTCAACTGATCTAGTGAA+GGG | 0.620688 | 1.3:-24598826 | None:intergenic |
| GCTCCCGATACTTGATGGCG+AGG | 0.628235 | 1.3:+24599800 | MS.gene063253:CDS |
| TGTATCCCATAATGGCAAAG+AGG | 0.640235 | 1.3:+24598084 | MS.gene063253:CDS |
| AGAATTTCAACTGCAATTAG+GGG | 0.640657 | 1.3:-24601234 | None:intergenic |
| GGATTAGACCTCTTCCACCA+AGG | 0.651322 | 1.3:+24599778 | MS.gene063253:CDS |
| AAGTAACTTACATTCAGTGA+CGG | 0.653960 | 1.3:-24598697 | None:intergenic |
| TACATGTGAATGAATTCTGA+CGG | 0.655091 | 1.3:-24601462 | None:intergenic |
| GAAGAGGTCTAATCCAGTGA+GGG | 0.663114 | 1.3:-24599770 | None:intergenic |
| TTAATTGCAAAAGCTCAGAA+GGG | 0.683329 | 1.3:+24600045 | MS.gene063253:CDS |
| GTGCGTTGATACTAGTAGAG+GGG | 0.694698 | 1.3:+24600008 | MS.gene063253:CDS |
| GGAAGAGGTCTAATCCAGTG+AGG | 0.700569 | 1.3:-24599771 | None:intergenic |
| CATTGTCCCACATAAGCTCG+GGG | 0.705703 | 1.3:-24599981 | None:intergenic |
| AAGTACCTTGATGTTCACAC+AGG | 0.718063 | 1.3:-24601505 | None:intergenic |
| CCAAAGGTTGTATATCACTG+TGG | 0.722141 | 1.3:+24601033 | MS.gene063253:CDS |
| GAATCTGTATCACAATTTGG+GGG | 0.804690 | 1.3:-24598938 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAAAAAAACAATTATTT+AGG | - | chr1.3:24599172-24599191 | None:intergenic | 10.0% |
| !! | AAGAAATAAAAAAAATTACT+TGG | - | chr1.3:24600840-24600859 | None:intergenic | 10.0% |
| !! | AATTCTAATTGTATAATTTA+AGG | - | chr1.3:24597623-24597642 | None:intergenic | 10.0% |
| !! | ATAAATTAACATATATGTAA+CGG | + | chr1.3:24599527-24599546 | MS.gene063253:intron | 10.0% |
| !! | TAAATTATACAATTAGAATT+TGG | + | chr1.3:24597623-24597642 | MS.gene063253:intron | 10.0% |
| !!! | TATTTTAAGTAATTGATTTT+GGG | + | chr1.3:24601144-24601163 | MS.gene063253:intron | 10.0% |
| !!! | TGTTTAATTATTAGTTTATT+GGG | + | chr1.3:24597039-24597058 | MS.gene063253:intron | 10.0% |
| !!! | TTGTTTAATTATTAGTTTAT+TGG | + | chr1.3:24597038-24597057 | MS.gene063253:intron | 10.0% |
| !! | AAGAAAAAAAAAGAAAAGAT+GGG | + | chr1.3:24597173-24597192 | MS.gene063253:intron | 15.0% |
| !! | AATATATAGATATTATGGAA+GGG | - | chr1.3:24598768-24598787 | None:intergenic | 15.0% |
| !! | TGTAATAAACAATAAATGTT+AGG | - | chr1.3:24600523-24600542 | None:intergenic | 15.0% |
| !!! | ATTTTTTATTGGCTTTTATA+TGG | - | chr1.3:24600220-24600239 | None:intergenic | 15.0% |
| !!! | GTATTTTAAGTAATTGATTT+TGG | + | chr1.3:24601143-24601162 | MS.gene063253:intron | 15.0% |
| !!! | TAACTTTATGGATTTTTTAT+TGG | - | chr1.3:24600231-24600250 | None:intergenic | 15.0% |
| !!! | TATTTCTATTTGCTTATTTA+TGG | + | chr1.3:24601351-24601370 | MS.gene063253:intron | 15.0% |
| !!! | TTTTTTTTTTCTTTTCAGTT+GGG | + | chr1.3:24600811-24600830 | MS.gene063253:intron | 15.0% |
| !!! | TTTTTTTTTTTCTTTTCAGT+TGG | + | chr1.3:24600810-24600829 | MS.gene063253:intron | 15.0% |
| !! | AACCAGTTCTTTAAATTAAA+GGG | + | chr1.3:24597095-24597114 | MS.gene063253:intron | 20.0% |
| !! | AAGCAAAAAAAGATTGATAA+AGG | + | chr1.3:24598197-24598216 | MS.gene063253:intron | 20.0% |
| !! | AATAATGATGGTCTATTAAT+AGG | + | chr1.3:24599649-24599668 | MS.gene063253:intron | 20.0% |
| !! | AATATTTATATGCATGTTGA+AGG | - | chr1.3:24598488-24598507 | None:intergenic | 20.0% |
| !! | AGTAAGAAAAATTGAGTAAA+TGG | + | chr1.3:24597759-24597778 | MS.gene063253:intron | 20.0% |
| !! | CTCAGAATATATAGATATTA+TGG | - | chr1.3:24598773-24598792 | None:intergenic | 20.0% |
| !! | GAAGAAAAAAAAAGAAAAGA+TGG | + | chr1.3:24597172-24597191 | MS.gene063253:intron | 20.0% |
| !! | GAATATATAGATATTATGGA+AGG | - | chr1.3:24598769-24598788 | None:intergenic | 20.0% |
| !! | GAATGTAAGTTACTTATATA+TGG | + | chr1.3:24598705-24598724 | MS.gene063253:intron | 20.0% |
| !! | TATCATCATTTGTTTAAAGA+TGG | + | chr1.3:24598881-24598900 | MS.gene063253:CDS | 20.0% |
| !! | TCTTTAAACAAATGATGATA+TGG | - | chr1.3:24598881-24598900 | None:intergenic | 20.0% |
| !! | TGTAAAATGAGATTATAAGA+TGG | + | chr1.3:24600758-24600777 | MS.gene063253:intron | 20.0% |
| !! | TTTATGATAAAGCTTATGAA+AGG | - | chr1.3:24596985-24597004 | None:intergenic | 20.0% |
| !! | TTTCCATTCTAAATATGAAT+GGG | - | chr1.3:24599046-24599065 | None:intergenic | 20.0% |
| !!! | AATATTTCAACTGATTTCAA+TGG | - | chr1.3:24597222-24597241 | None:intergenic | 20.0% |
| !!! | AATGGTAATTTTTTGTTTAC+AGG | + | chr1.3:24597997-24598016 | MS.gene063253:intron | 20.0% |
| !!! | ATCATTTTTAGCTTTTTTGA+TGG | + | chr1.3:24599382-24599401 | MS.gene063253:intron | 20.0% |
| !!! | ATTTGTTTTAGATATTTGTC+TGG | - | chr1.3:24599261-24599280 | None:intergenic | 20.0% |
| !!! | ATTTTATAAGAAGCCAAATA+TGG | - | chr1.3:24600408-24600427 | None:intergenic | 20.0% |
| !!! | TCCTATATTTTTTACATTAG+CGG | + | chr1.3:24599558-24599577 | MS.gene063253:intron | 20.0% |
| !!! | TTAAATGTTTTATCTTCTAG+TGG | + | chr1.3:24598598-24598617 | MS.gene063253:intron | 20.0% |
| !!! | TTTGTTTTAGATATTTGTCT+GGG | - | chr1.3:24599260-24599279 | None:intergenic | 20.0% |
| !!! | TTTTCCATTCTAAATATGAA+TGG | - | chr1.3:24599047-24599066 | None:intergenic | 20.0% |
| ! | AAAAGAGGATAGCTTAATTA+AGG | - | chr1.3:24598381-24598400 | None:intergenic | 25.0% |
| ! | AACAGATATACACAGAAATT+GGG | - | chr1.3:24600179-24600198 | None:intergenic | 25.0% |
| ! | AAGGGCAATAGATATATTAT+GGG | - | chr1.3:24598750-24598769 | None:intergenic | 25.0% |
| ! | ACCGCTAATGTAAAAAATAT+AGG | - | chr1.3:24599562-24599581 | None:intergenic | 25.0% |
| ! | AGATTGACAAATTTGTACAT+AGG | + | chr1.3:24598421-24598440 | MS.gene063253:intron | 25.0% |
| ! | ATATGTAACTCTTGTATCTA+TGG | - | chr1.3:24599311-24599330 | None:intergenic | 25.0% |
| ! | ATGAATCTGTATCACAATTT+GGG | - | chr1.3:24598943-24598962 | None:intergenic | 25.0% |
| ! | ATGGAAAATTGAAGATTATG+CGG | + | chr1.3:24599059-24599078 | MS.gene063253:intron | 25.0% |
| ! | ATTAGAAATACTCTGTTTGA+GGG | + | chr1.3:24597497-24597516 | MS.gene063253:intron | 25.0% |
| ! | CAAGAAACTTTACAAGTTTA+TGG | + | chr1.3:24597708-24597727 | MS.gene063253:intron | 25.0% |
| ! | CTTATTGTCAAATATTTCAC+TGG | + | chr1.3:24599737-24599756 | MS.gene063253:CDS | 25.0% |
| ! | GAACCAGTTCTTTAAATTAA+AGG | + | chr1.3:24597094-24597113 | MS.gene063253:intron | 25.0% |
| ! | GAATTTAACTCATTTGTAGA+TGG | - | chr1.3:24597590-24597609 | None:intergenic | 25.0% |
| ! | GATGGTAGATGAATTAATAA+AGG | + | chr1.3:24599400-24599419 | MS.gene063253:intron | 25.0% |
| ! | TAGTAAATAGCTCAACAAAA+TGG | + | chr1.3:24597256-24597275 | MS.gene063253:intron | 25.0% |
| ! | TCATTTGACAACTAACTTTA+TGG | - | chr1.3:24600243-24600262 | None:intergenic | 25.0% |
| ! | TCTTATAAACTCAGTACATT+CGG | - | chr1.3:24597675-24597694 | None:intergenic | 25.0% |
| ! | TGAAAAGTTATATTGTACCT+TGG | + | chr1.3:24600924-24600943 | MS.gene063253:intron | 25.0% |
| ! | TGAGAAATTGTGATCAATTA+GGG | + | chr1.3:24599335-24599354 | MS.gene063253:intron | 25.0% |
| ! | TGTATCAGTTATATCATACA+CGG | + | chr1.3:24598519-24598538 | MS.gene063253:intron | 25.0% |
| ! | TTAAATGTGTGTGTTATGTT+CGG | - | chr1.3:24600702-24600721 | None:intergenic | 25.0% |
| ! | TTAATATTCTTCAGCTAGTT+TGG | + | chr1.3:24599884-24599903 | MS.gene063253:intron | 25.0% |
| ! | TTAATGAAAAAGCAAGAGAA+AGG | - | chr1.3:24598582-24598601 | None:intergenic | 25.0% |
| ! | TTGAGAAATTGTGATCAATT+AGG | + | chr1.3:24599334-24599353 | MS.gene063253:intron | 25.0% |
| ! | TTTCCCATTCATATTTAGAA+TGG | + | chr1.3:24599040-24599059 | MS.gene063253:intron | 25.0% |
| !! | ACAAATGTGTTTCTATTGAA+CGG | - | chr1.3:24597288-24597307 | None:intergenic | 25.0% |
| !! | CAATCTAAAACAGAATTCAA+TGG | - | chr1.3:24598236-24598255 | None:intergenic | 25.0% |
| !! | GTTCTTATTTATTCTCTATC+AGG | + | chr1.3:24601194-24601213 | MS.gene063253:intron | 25.0% |
| !! | TAATATTCTTCAGCTAGTTT+GGG | + | chr1.3:24599885-24599904 | MS.gene063253:intron | 25.0% |
| AAAATACCTCTTTGCCATTA+TGG | - | chr1.3:24598093-24598112 | None:intergenic | 30.0% | |
| AAAATTGCAAAAACACGTAC+CGG | - | chr1.3:24601078-24601097 | None:intergenic | 30.0% | |
| AAATACCTCTTTGCCATTAT+GGG | - | chr1.3:24598092-24598111 | None:intergenic | 30.0% | |
| AAGTAACTTACATTCAGTGA+CGG | - | chr1.3:24598700-24598719 | None:intergenic | 30.0% | |
| AATTTATCTATCCACTGAAC+AGG | - | chr1.3:24598977-24598996 | None:intergenic | 30.0% | |
| AGAATTTCAACTGCAATTAG+GGG | - | chr1.3:24601237-24601256 | None:intergenic | 30.0% | |
| AGTATGAGGGTAAATTCTTA+TGG | - | chr1.3:24600291-24600310 | None:intergenic | 30.0% | |
| ATAGAAACACATTTGTAGTG+TGG | + | chr1.3:24597292-24597311 | MS.gene063253:intron | 30.0% | |
| ATTTATCTATCCACTGAACA+GGG | - | chr1.3:24598976-24598995 | None:intergenic | 30.0% | |
| ATTTATTCTCTATCAGGAAC+TGG | + | chr1.3:24601200-24601219 | MS.gene063253:intron | 30.0% | |
| ATTTCTGTGTATATCTGTTG+AGG | + | chr1.3:24600180-24600199 | MS.gene063253:intron | 30.0% | |
| CAACAGATATACACAGAAAT+TGG | - | chr1.3:24600180-24600199 | None:intergenic | 30.0% | |
| CAATCTAAACCAAAATCCAA+CGG | - | chr1.3:24598407-24598426 | None:intergenic | 30.0% | |
| CATTAGAAATACTCTGTTTG+AGG | + | chr1.3:24597496-24597515 | MS.gene063253:intron | 30.0% | |
| CGCTGTATATGTAGAAAAAA+GGG | + | chr1.3:24600433-24600452 | MS.gene063253:intron | 30.0% | |
| CTTTACAGTACTTGTCAATA+TGG | + | chr1.3:24601383-24601402 | MS.gene063253:CDS | 30.0% | |
| GAACATAACACACACATTTA+AGG | + | chr1.3:24600701-24600720 | MS.gene063253:intron | 30.0% | |
| GAAGATAGTCCAATTAAGAA+GGG | + | chr1.3:24597781-24597800 | MS.gene063253:intron | 30.0% | |
| GAAGGGCAATAGATATATTA+TGG | - | chr1.3:24598751-24598770 | None:intergenic | 30.0% | |
| GAGAATTTCAACTGCAATTA+GGG | - | chr1.3:24601238-24601257 | None:intergenic | 30.0% | |
| GATGAATCTGTATCACAATT+TGG | - | chr1.3:24598944-24598963 | None:intergenic | 30.0% | |
| GTTATTCTAAATGTGTGGTA+TGG | - | chr1.3:24600371-24600390 | None:intergenic | 30.0% | |
| GTTTCATACTACATTCTAAC+CGG | - | chr1.3:24597347-24597366 | None:intergenic | 30.0% | |
| TAACATATATGTAACGGTGT+CGG | + | chr1.3:24599533-24599552 | MS.gene063253:intron | 30.0% | |
| TACATGTGAATGAATTCTGA+CGG | - | chr1.3:24601465-24601484 | None:intergenic | 30.0% | |
| TAGATTTGAGAAAAGAACCA+AGG | - | chr1.3:24600944-24600963 | None:intergenic | 30.0% | |
| TCATTGATCAAGTTAGTGTT+CGG | + | chr1.3:24601105-24601124 | MS.gene063253:intron | 30.0% | |
| TCGCTGTATATGTAGAAAAA+AGG | + | chr1.3:24600432-24600451 | MS.gene063253:intron | 30.0% | |
| TGAATCTGTATCACAATTTG+GGG | - | chr1.3:24598942-24598961 | None:intergenic | 30.0% | |
| TGAGAATTTCAACTGCAATT+AGG | - | chr1.3:24601239-24601258 | None:intergenic | 30.0% | |
| TGTCTGTTATTCTAAATGTG+TGG | - | chr1.3:24600376-24600395 | None:intergenic | 30.0% | |
| TTAATTGCAAAAGCTCAGAA+GGG | + | chr1.3:24600045-24600064 | MS.gene063253:CDS | 30.0% | |
| TTGTCAAATATTTCACTGGA+AGG | + | chr1.3:24599741-24599760 | MS.gene063253:CDS | 30.0% | |
| TTGTCAAATGAACCAAATAG+TGG | + | chr1.3:24600252-24600271 | MS.gene063253:intron | 30.0% | |
| TTTACTAGATCATGTTAAGC+TGG | + | chr1.3:24597547-24597566 | MS.gene063253:intron | 30.0% | |
| TTTCTAATGTCAAAAACTCC+CGG | - | chr1.3:24597485-24597504 | None:intergenic | 30.0% | |
| TTTCTTCATTGTCTTCATGA+AGG | - | chr1.3:24597159-24597178 | None:intergenic | 30.0% | |
| TTTGCTTATGAATCAATCAG+AGG | - | chr1.3:24600785-24600804 | None:intergenic | 30.0% | |
| ! | CTCCCTTTAATTTAAAGAAC+TGG | - | chr1.3:24597100-24597119 | None:intergenic | 30.0% |
| ! | TTTGTCTCATTTGTTTGTTG+TGG | + | chr1.3:24598331-24598350 | MS.gene063253:intron | 30.0% |
| ! | TTTTACACAAACAAAGTTGC+AGG | - | chr1.3:24600745-24600764 | None:intergenic | 30.0% |
| !! | GCTTCTATAATCTATTTCTG+CGG | + | chr1.3:24597956-24597975 | MS.gene063253:intron | 30.0% |
| !! | TATGCGGTTGATAATAATGA+TGG | + | chr1.3:24599637-24599656 | MS.gene063253:intron | 30.0% |
| AAAATCCAACGGCTAAAAAG+AGG | - | chr1.3:24598396-24598415 | None:intergenic | 35.0% | |
| AAACGCTATTAATCTCTCGT+TGG | - | chr1.3:24596917-24596936 | None:intergenic | 35.0% | |
| AAATGAACCAAATAGTGGTG+TGG | + | chr1.3:24600257-24600276 | MS.gene063253:intron | 35.0% | |
| AACATCAAACCCTAACTGAT+AGG | - | chr1.3:24601172-24601191 | None:intergenic | 35.0% | |
| AAGAAAAAAGTGACGTGCAA+GGG | + | chr1.3:24597120-24597139 | MS.gene063253:intron | 35.0% | |
| AATAAAGATGAAGCAGTGGT+TGG | + | chr1.3:24599714-24599733 | MS.gene063253:CDS | 35.0% | |
| AATGCATACTCTGATATGTC+AGG | - | chr1.3:24601279-24601298 | None:intergenic | 35.0% | |
| ACAACAACAGTGTAAAACAC+AGG | - | chr1.3:24598136-24598155 | None:intergenic | 35.0% | |
| ACCTGAACTTTAAGTAACTG+CGG | + | chr1.3:24597438-24597457 | MS.gene063253:intron | 35.0% | |
| ACTCATTTATAAGAGACTGC+TGG | + | chr1.3:24598267-24598286 | MS.gene063253:intron | 35.0% | |
| ACTGCAGTTTCTTAAACAGT+CGG | + | chr1.3:24598648-24598667 | MS.gene063253:intron | 35.0% | |
| ATGGAAAGGGTTTACCATTT+GGG | - | chr1.3:24599915-24599934 | None:intergenic | 35.0% | |
| ATGTTAGGAGAAACAGATCA+TGG | - | chr1.3:24600508-24600527 | None:intergenic | 35.0% | |
| ATTCAATGGAAGTTGTGAAC+AGG | + | chr1.3:24601418-24601437 | MS.gene063253:CDS | 35.0% | |
| ATTCATCACAACCATTAACG+GGG | + | chr1.3:24600456-24600475 | MS.gene063253:intron | 35.0% | |
| CAAAAGGAATTGCTGAAATG+GGG | - | chr1.3:24600998-24601017 | None:intergenic | 35.0% | |
| CAACAACGACTGAATTTAGA+TGG | - | chr1.3:24597880-24597899 | None:intergenic | 35.0% | |
| CCAAAAGGAATTGCTGAAAT+GGG | - | chr1.3:24600999-24601018 | None:intergenic | 35.0% | |
| CCAAAGACTACTTTGCTTTA+TGG | - | chr1.3:24597836-24597855 | None:intergenic | 35.0% | |
| CCAATTAAGAAGGGAGAAAA+AGG | + | chr1.3:24597790-24597809 | MS.gene063253:intron | 35.0% | |
| CCATAAAGCAAAGTAGTCTT+TGG | + | chr1.3:24597833-24597852 | MS.gene063253:intron | 35.0% | |
| CGATGGATGGCATTATTATT+AGG | + | chr1.3:24598169-24598188 | MS.gene063253:intron | 35.0% | |
| CTTAAAATACCCTCTCATAC+TGG | - | chr1.3:24601133-24601152 | None:intergenic | 35.0% | |
| CTTAATTGCAAAAGCTCAGA+AGG | + | chr1.3:24600044-24600063 | MS.gene063253:CDS | 35.0% | |
| GAATCTGTATCACAATTTGG+GGG | - | chr1.3:24598941-24598960 | None:intergenic | 35.0% | |
| GATACAGATTCATCAGAGTA+TGG | + | chr1.3:24598950-24598969 | MS.gene063253:intron | 35.0% | |
| GATTCATCACAACCATTAAC+GGG | + | chr1.3:24600455-24600474 | MS.gene063253:intron | 35.0% | |
| GCGTTTATTCTGCAACTATT+AGG | + | chr1.3:24598055-24598074 | MS.gene063253:CDS | 35.0% | |
| GGAAGATAGTCCAATTAAGA+AGG | + | chr1.3:24597780-24597799 | MS.gene063253:intron | 35.0% | |
| GGATTCATCACAACCATTAA+CGG | + | chr1.3:24600454-24600473 | MS.gene063253:intron | 35.0% | |
| GTTTATAAGAGTTTACGCTG+AGG | + | chr1.3:24597685-24597704 | MS.gene063253:intron | 35.0% | |
| TAGTGACTGAGTATTAGCTA+AGG | - | chr1.3:24601321-24601340 | None:intergenic | 35.0% | |
| TCCAAAAACAGTTTCTTCAC+AGG | - | chr1.3:24597369-24597388 | None:intergenic | 35.0% | |
| TCCAAAAGGAATTGCTGAAA+TGG | - | chr1.3:24601000-24601019 | None:intergenic | 35.0% | |
| ! | AAACGCCTTCTCAATTTTTG+TGG | - | chr1.3:24598041-24598060 | None:intergenic | 35.0% |
| ! | ACCTGTGAAGAAACTGTTTT+TGG | + | chr1.3:24597365-24597384 | MS.gene063253:intron | 35.0% |
| ! | CACTGCTTCATCTTTATTTC+CGG | - | chr1.3:24599712-24599731 | None:intergenic | 35.0% |
| ! | CCTTTTTCTCCCTTCTTAAT+TGG | - | chr1.3:24597793-24597812 | None:intergenic | 35.0% |
| ! | CGTTCTTTGTTGGTTAAACA+TGG | + | chr1.3:24598447-24598466 | MS.gene063253:intron | 35.0% |
| ! | CTTATGAAAGGATTTGAAGC+CGG | - | chr1.3:24596973-24596992 | None:intergenic | 35.0% |
| ! | TTAAGGTACTTGTATCAGAG+AGG | - | chr1.3:24598364-24598383 | None:intergenic | 35.0% |
| ! | TTGTCACTTATCACTTACGA+TGG | + | chr1.3:24598152-24598171 | MS.gene063253:intron | 35.0% |
| !! | TCTTTTTAGCCGTTGGATTT+TGG | + | chr1.3:24598395-24598414 | MS.gene063253:intron | 35.0% |
| !! | TGAAAAGCGTTTACCATAGA+TGG | - | chr1.3:24599934-24599953 | None:intergenic | 35.0% |
| !!! | ATTTTGGGTTCCTATCAGTT+AGG | + | chr1.3:24601159-24601178 | MS.gene063253:intron | 35.0% |
| !!! | TTTTGGGTTCCTATCAGTTA+GGG | + | chr1.3:24601160-24601179 | MS.gene063253:intron | 35.0% |
| AACCATTAACGGGGAAATCA+AGG | + | chr1.3:24600465-24600484 | MS.gene063253:intron | 40.0% | |
| AACCGCATAACTATGAAGCA+CGG | - | chr1.3:24599626-24599645 | None:intergenic | 40.0% | |
| AAGTACCTTGATGTTCACAC+AGG | - | chr1.3:24601508-24601527 | None:intergenic | 40.0% | |
| AATACCTCGCCATCAAGTAT+CGG | - | chr1.3:24599807-24599826 | None:intergenic | 40.0% | |
| ACATAGGATGCGTTCTTTGT+TGG | + | chr1.3:24598437-24598456 | MS.gene063253:intron | 40.0% | |
| ACCATTAACGGGGAAATCAA+GGG | + | chr1.3:24600466-24600485 | MS.gene063253:intron | 40.0% | |
| ACTCTTGTATCTATGGTGTG+CGG | - | chr1.3:24599304-24599323 | None:intergenic | 40.0% | |
| AGAAAAAAGTGACGTGCAAG+GGG | + | chr1.3:24597121-24597140 | MS.gene063253:intron | 40.0% | |
| AGCGTTTACCATAGATGGAA+AGG | - | chr1.3:24599929-24599948 | None:intergenic | 40.0% | |
| AGGGTCCACAAAAATTGAGA+AGG | + | chr1.3:24598033-24598052 | MS.gene063253:CDS | 40.0% | |
| ATCAGGAAGGTTCTCTTAGA+TGG | - | chr1.3:24597320-24597339 | None:intergenic | 40.0% | |
| ATCATCCTGTGTGAACATCA+AGG | + | chr1.3:24601500-24601519 | MS.gene063253:CDS | 40.0% | |
| ATCTAAGAGAACCTTCCTGA+TGG | + | chr1.3:24597319-24597338 | MS.gene063253:intron | 40.0% | |
| ATCTAGTAAAAAGCCCAACC+AGG | - | chr1.3:24597537-24597556 | None:intergenic | 40.0% | |
| CACTTATCACTTACGATGGA+TGG | + | chr1.3:24598156-24598175 | MS.gene063253:intron | 40.0% | |
| CCAAAGGTTGTATATCACTG+TGG | + | chr1.3:24601033-24601052 | MS.gene063253:CDS | 40.0% | |
| CCAAATCTTTCTACGCCATA+AGG | + | chr1.3:24600616-24600635 | MS.gene063253:intron | 40.0% | |
| CCACAGTGATATACAACCTT+TGG | - | chr1.3:24601036-24601055 | None:intergenic | 40.0% | |
| CCTTATGGCGTAGAAAGATT+TGG | - | chr1.3:24600619-24600638 | None:intergenic | 40.0% | |
| CGGAAATAAAGATGAAGCAG+TGG | + | chr1.3:24599710-24599729 | MS.gene063253:CDS | 40.0% | |
| CTCACCAAAGGTAGTTTACA+TGG | + | chr1.3:24600320-24600339 | MS.gene063253:intron | 40.0% | |
| GAAGAAAAAAGTGACGTGCA+AGG | + | chr1.3:24597119-24597138 | MS.gene063253:intron | 40.0% | |
| GACAAACAGTCTGCCATATT+TGG | + | chr1.3:24600392-24600411 | MS.gene063253:intron | 40.0% | |
| GATGGAAAGGGTTTACCATT+TGG | - | chr1.3:24599916-24599935 | None:intergenic | 40.0% | |
| GCATGTTTCAATTTGAGCCA+AGG | - | chr1.3:24600900-24600919 | None:intergenic | 40.0% | |
| GCGTTTACCATAGATGGAAA+GGG | - | chr1.3:24599928-24599947 | None:intergenic | 40.0% | |
| GCTAAGGACAGAGATATATG+AGG | - | chr1.3:24601305-24601324 | None:intergenic | 40.0% | |
| GCTTCAACTGATCTAGTGAA+GGG | - | chr1.3:24598829-24598848 | None:intergenic | 40.0% | |
| GGACATGAGTCTACATTCAA+TGG | + | chr1.3:24601404-24601423 | MS.gene063253:CDS | 40.0% | |
| TACTTATCTTCTCTGATGCC+AGG | + | chr1.3:24598799-24598818 | MS.gene063253:intron | 40.0% | |
| TACTTCAACACTCCTACGAT+CGG | + | chr1.3:24599191-24599210 | MS.gene063253:intron | 40.0% | |
| TATGAGTGTTACACAGGTGT+CGG | - | chr1.3:24599220-24599239 | None:intergenic | 40.0% | |
| TATTCTCTATCAGGAACTGG+TGG | + | chr1.3:24601203-24601222 | MS.gene063253:intron | 40.0% | |
| TGAGTTCAGTCTGAGTATGA+GGG | - | chr1.3:24600304-24600323 | None:intergenic | 40.0% | |
| TGCTTCAACTGATCTAGTGA+AGG | - | chr1.3:24598830-24598849 | None:intergenic | 40.0% | |
| TGGTAAACCCTTTCCATCTA+TGG | + | chr1.3:24599918-24599937 | MS.gene063253:intron | 40.0% | |
| TGTATCCCATAATGGCAAAG+AGG | + | chr1.3:24598084-24598103 | MS.gene063253:CDS | 40.0% | |
| TTAAGCGTTATCCCACTTCA+AGG | + | chr1.3:24600590-24600609 | MS.gene063253:intron | 40.0% | |
| ! | ATAATCACCTCTTGCTGTAC+AGG | - | chr1.3:24600081-24600100 | None:intergenic | 40.0% |
| ! | ATGTGCGTTGATACTAGTAG+AGG | + | chr1.3:24600006-24600025 | MS.gene063253:CDS | 40.0% |
| ! | CCCATTTCAGCAATTCCTTT+TGG | + | chr1.3:24600996-24601015 | MS.gene063253:intron | 40.0% |
| ! | TAAACGCTTTTCAGCTAGCT+GGG | + | chr1.3:24599941-24599960 | MS.gene063253:intron | 40.0% |
| ! | TGTGCGTTGATACTAGTAGA+GGG | + | chr1.3:24600007-24600026 | MS.gene063253:CDS | 40.0% |
| ! | TTATTTCCGGTGCCAAGTTT+AGG | - | chr1.3:24599699-24599718 | None:intergenic | 40.0% |
| ! | TTTCAACACTCTAGCTCCAT+CGG | - | chr1.3:24597409-24597428 | None:intergenic | 40.0% |
| !! | GGTGTTGATGTATCCCATAA+TGG | + | chr1.3:24598076-24598095 | MS.gene063253:CDS | 40.0% |
| !! | TTTTTACATTAGCGGTGTCG+CGG | + | chr1.3:24599566-24599585 | MS.gene063253:intron | 40.0% |
| !!! | AATTCCTTTTGGAGCTTGCA+CGG | + | chr1.3:24601007-24601026 | MS.gene063253:CDS | 40.0% |
| AAGATTTGGCTGCCTTGAAG+TGG | - | chr1.3:24600605-24600624 | None:intergenic | 45.0% | |
| AATAGGTTTGATCAGCGACC+TGG | + | chr1.3:24599666-24599685 | MS.gene063253:intron | 45.0% | |
| ACCATTGTCCCACATAAGCT+CGG | - | chr1.3:24599986-24600005 | None:intergenic | 45.0% | |
| ACTCAGACTGAACTCACCAA+AGG | + | chr1.3:24600308-24600327 | MS.gene063253:intron | 45.0% | |
| AGATTTGGCTGCCTTGAAGT+GGG | - | chr1.3:24600604-24600623 | None:intergenic | 45.0% | |
| AGTGCAACCACACCACTATT+TGG | - | chr1.3:24600267-24600286 | None:intergenic | 45.0% | |
| AGTTGGCAGTAGAGCAGTAT+AGG | + | chr1.3:24600646-24600665 | MS.gene063253:intron | 45.0% | |
| AGTTTACATGGCTCCGTCTA+CGG | + | chr1.3:24600332-24600351 | MS.gene063253:intron | 45.0% | |
| ATAAGCTCGGGGTAGTCATT+AGG | - | chr1.3:24599973-24599992 | None:intergenic | 45.0% | |
| ATACAGAGAGAAACTGCCGA+TGG | + | chr1.3:24597390-24597409 | MS.gene063253:intron | 45.0% | |
| ATACCTCGCCATCAAGTATC+GGG | - | chr1.3:24599806-24599825 | None:intergenic | 45.0% | |
| CCATTAACGGGGAAATCAAG+GGG | + | chr1.3:24600467-24600486 | MS.gene063253:intron | 45.0% | |
| CGCTATTAATCTCTCGTTGG+TGG | - | chr1.3:24596914-24596933 | None:intergenic | 45.0% | |
| CTAGTTTGGGTCAACCCAAA+TGG | + | chr1.3:24599898-24599917 | MS.gene063253:intron | 45.0% | |
| CTTTAAGTAACTGCGGCACA+TGG | + | chr1.3:24597445-24597464 | MS.gene063253:intron | 45.0% | |
| GAAGAGGTCTAATCCAGTGA+GGG | - | chr1.3:24599773-24599792 | None:intergenic | 45.0% | |
| GATTATGCGGCTATGAAGCA+CGG | + | chr1.3:24599072-24599091 | MS.gene063253:intron | 45.0% | |
| GCCGCAGTTACTTAAAGTTC+AGG | - | chr1.3:24597442-24597461 | None:intergenic | 45.0% | |
| GGAGCCATGTAAACTACCTT+TGG | - | chr1.3:24600327-24600346 | None:intergenic | 45.0% | |
| GGCTTATTCATCCCAGAATC+CGG | + | chr1.3:24596951-24596970 | MS.gene063253:CDS | 45.0% | |
| GTCCGTGCTTCATAGTTATG+CGG | + | chr1.3:24599621-24599640 | MS.gene063253:intron | 45.0% | |
| GTGAGTTCAGTCTGAGTATG+AGG | - | chr1.3:24600305-24600324 | None:intergenic | 45.0% | |
| TAAGCTCGGGGTAGTCATTA+GGG | - | chr1.3:24599972-24599991 | None:intergenic | 45.0% | |
| TACAGGCTTCCTGTCATGAA+GGG | + | chr1.3:24598014-24598033 | MS.gene063253:intron | 45.0% | |
| TGCCAACTCATTGGTCCTTA+TGG | - | chr1.3:24600634-24600653 | None:intergenic | 45.0% | |
| TGTGACTGTTGACGAGACAA+TGG | + | chr1.3:24597979-24597998 | MS.gene063253:intron | 45.0% | |
| TGTTCGGATCCAGTATGAGA+GGG | + | chr1.3:24601121-24601140 | MS.gene063253:intron | 45.0% | |
| TTACAGGCTTCCTGTCATGA+AGG | + | chr1.3:24598013-24598032 | MS.gene063253:intron | 45.0% | |
| ! | AAACGCTTTTCAGCTAGCTG+GGG | + | chr1.3:24599942-24599961 | MS.gene063253:intron | 45.0% |
| ! | AAGGATTTGAAGCCGGATTC+TGG | - | chr1.3:24596966-24596985 | None:intergenic | 45.0% |
| ! | ACATTCTAACCGGTTCCATC+AGG | - | chr1.3:24597337-24597356 | None:intergenic | 45.0% |
| ! | ACTGACTCCAAGAAAGTTGC+CGG | + | chr1.3:24601056-24601075 | MS.gene063253:CDS | 45.0% |
| ! | AGGATTTGAAGCCGGATTCT+GGG | - | chr1.3:24596965-24596984 | None:intergenic | 45.0% |
| ! | GTAAACGCTTTTCAGCTAGC+TGG | + | chr1.3:24599940-24599959 | MS.gene063253:intron | 45.0% |
| ! | GTGCGTTGATACTAGTAGAG+GGG | + | chr1.3:24600008-24600027 | MS.gene063253:CDS | 45.0% |
| ! | TTTTGTGGACCCTTCATGAC+AGG | - | chr1.3:24598026-24598045 | None:intergenic | 45.0% |
| !! | ATGGAGTAAGCATTGGAACC+GGG | + | chr1.3:24597464-24597483 | MS.gene063253:intron | 45.0% |
| !! | CATGGAGTAAGCATTGGAAC+CGG | + | chr1.3:24597463-24597482 | MS.gene063253:intron | 45.0% |
| !! | GCTATCCTCTTTTTAGCCGT+TGG | + | chr1.3:24598388-24598407 | MS.gene063253:intron | 45.0% |
| !!! | ATTCCTTTTGGAGCTTGCAC+GGG | + | chr1.3:24601008-24601027 | MS.gene063253:CDS | 45.0% |
| !!! | AATATTTTTTATTTTTATTG+AGG | + | chr1.3:24599843-24599862 | MS.gene063253:intron | 5.0% |
| AACACTCATACGAGCCGTGT+CGG | + | chr1.3:24599230-24599249 | MS.gene063253:intron | 50.0% | |
| ACACAGCCTAAACTTGGCAC+CGG | + | chr1.3:24599690-24599709 | MS.gene063253:CDS | 50.0% | |
| AGCGTTTGCTCTGCTAGTTG+AGG | + | chr1.3:24596930-24596949 | MS.gene063253:CDS | 50.0% | |
| ATGAAGCACGGACTCTGACA+CGG | - | chr1.3:24599614-24599633 | None:intergenic | 50.0% | |
| ATGACTACCCCGAGCTTATG+TGG | + | chr1.3:24599974-24599993 | MS.gene063253:CDS | 50.0% | |
| CACAATTTGGGGGAACGTCT+GGG | - | chr1.3:24598931-24598950 | None:intergenic | 50.0% | |
| CATTGTCCCACATAAGCTCG+GGG | - | chr1.3:24599984-24600003 | None:intergenic | 50.0% | |
| CCAAGTTTAGGCTGTGTTCC+AGG | - | chr1.3:24599687-24599706 | None:intergenic | 50.0% | |
| CCATTGTCCCACATAAGCTC+GGG | - | chr1.3:24599985-24600004 | None:intergenic | 50.0% | |
| CCCCTTGATTTCCCCGTTAA+TGG | - | chr1.3:24600470-24600489 | None:intergenic | 50.0% | |
| CCTGGAACACAGCCTAAACT+TGG | + | chr1.3:24599684-24599703 | MS.gene063253:CDS | 50.0% | |
| CGCCATAAGGACCAATGAGT+TGG | + | chr1.3:24600629-24600648 | MS.gene063253:intron | 50.0% | |
| CTGCTCTACTGCCAACTCAT+TGG | - | chr1.3:24600643-24600662 | None:intergenic | 50.0% | |
| GAGAACCTTCCTGATGGAAC+CGG | + | chr1.3:24597325-24597344 | MS.gene063253:intron | 50.0% | |
| GATCTAGTGAAGGGAAGTCC+TGG | - | chr1.3:24598820-24598839 | None:intergenic | 50.0% | |
| GGAAGAGGTCTAATCCAGTG+AGG | - | chr1.3:24599774-24599793 | None:intergenic | 50.0% | |
| GGATTAGACCTCTTCCACCA+AGG | + | chr1.3:24599778-24599797 | MS.gene063253:CDS | 50.0% | |
| GGCTCGTATGAGTGTTACAC+AGG | - | chr1.3:24599226-24599245 | None:intergenic | 50.0% | |
| GTGTTCGGATCCAGTATGAG+AGG | + | chr1.3:24601120-24601139 | MS.gene063253:intron | 50.0% | |
| TAGTAGAGGGGCTGCAGTAA+GGG | + | chr1.3:24600020-24600039 | MS.gene063253:CDS | 50.0% | |
| TATGAAGCACGGACACCTCT+AGG | + | chr1.3:24599083-24599102 | MS.gene063253:intron | 50.0% | |
| TCACAATTTGGGGGAACGTC+TGG | - | chr1.3:24598932-24598951 | None:intergenic | 50.0% | |
| TCTGTTTGAGGGAATGTGCG+TGG | + | chr1.3:24597508-24597527 | MS.gene063253:intron | 50.0% | |
| TCTTGCACCTGTACAGCAAG+AGG | + | chr1.3:24600071-24600090 | MS.gene063253:CDS | 50.0% | |
| TGACTACCCCGAGCTTATGT+GGG | + | chr1.3:24599975-24599994 | MS.gene063253:CDS | 50.0% | |
| TGGAAGGATTGAACCCTCAC+TGG | + | chr1.3:24599757-24599776 | MS.gene063253:CDS | 50.0% | |
| TTTGTCTGGGTTGTCCGACA+CGG | - | chr1.3:24599247-24599266 | None:intergenic | 50.0% | |
| ! | ACACGTACCGGCAACTTTCT+TGG | - | chr1.3:24601066-24601085 | None:intergenic | 50.0% |
| ! | GGCATCATGTGTTTTGCTGC+TGG | + | chr1.3:24598540-24598559 | MS.gene063253:intron | 50.0% |
| ! | TACGGGTGTCATAGGAGTGT+CGG | - | chr1.3:24599128-24599147 | None:intergenic | 50.0% |
| ! | TCTAACCGGTTCCATCAGGA+AGG | - | chr1.3:24597333-24597352 | None:intergenic | 50.0% |
| AATGTGCGTGGATGCCTGGT+TGG | + | chr1.3:24597520-24597539 | MS.gene063253:intron | 55.0% | |
| ATGTGCGTGGATGCCTGGTT+GGG | + | chr1.3:24597521-24597540 | MS.gene063253:intron | 55.0% | |
| CAGAGTATGGCCCTGTTCAG+TGG | + | chr1.3:24598963-24598982 | MS.gene063253:intron | 55.0% | |
| CAGTTCGACACGTGTCGTAC+GGG | - | chr1.3:24599145-24599164 | None:intergenic | 55.0% | |
| CCAAGGCTCCCGATACTTGA+TGG | + | chr1.3:24599795-24599814 | MS.gene063253:CDS | 55.0% | |
| CCAGTTCGACACGTGTCGTA+CGG | - | chr1.3:24599146-24599165 | None:intergenic | 55.0% | |
| CCCGAGCTTATGTGGGACAA+TGG | + | chr1.3:24599982-24600001 | MS.gene063253:CDS | 55.0% | |
| CTAGTAGAGGGGCTGCAGTA+AGG | + | chr1.3:24600019-24600038 | MS.gene063253:CDS | 55.0% | |
| GATCCCGTGCAAGCTCCAAA+AGG | - | chr1.3:24601014-24601033 | None:intergenic | 55.0% | |
| GCGGCACATGGAGTAAGCAT+TGG | + | chr1.3:24597457-24597476 | MS.gene063253:intron | 55.0% | |
| GTGTGGTATGGTGTACCCCT+GGG | - | chr1.3:24600359-24600378 | None:intergenic | 55.0% | |
| TGTGTGGTATGGTGTACCCC+TGG | - | chr1.3:24600360-24600379 | None:intergenic | 55.0% | |
| ! | ACGTGTCGTACGGGTGTCAT+AGG | - | chr1.3:24599136-24599155 | None:intergenic | 55.0% |
| !! | CCATCAAGTATCGGGAGCCT+TGG | - | chr1.3:24599798-24599817 | None:intergenic | 55.0% |
| !! | TCAAGTATCGGGAGCCTTGG+TGG | - | chr1.3:24599795-24599814 | None:intergenic | 55.0% |
| ACGGACACCACGACACGACA+CGG | - | chr1.3:24599595-24599614 | None:intergenic | 60.0% | |
| AGGGAATGTGCGTGGATGCC+TGG | + | chr1.3:24597516-24597535 | MS.gene063253:intron | 60.0% | |
| ATCGGGAGCCTTGGTGGAAG+AGG | - | chr1.3:24599789-24599808 | None:intergenic | 60.0% | |
| CCGTACGACACGTGTCGAAC+TGG | + | chr1.3:24599143-24599162 | MS.gene063253:intron | 60.0% | |
| GGAGCTTGCACGGGATCCAA+AGG | + | chr1.3:24601017-24601036 | MS.gene063253:CDS | 60.0% | |
| TGTACCCCTGGGTCCGTAGA+CGG | - | chr1.3:24600348-24600367 | None:intergenic | 60.0% | |
| TTTGGGGGAACGTCTGGGTC+AGG | - | chr1.3:24598926-24598945 | None:intergenic | 60.0% | |
| !! | AGGTGTCGGACACCGATCGT+AGG | - | chr1.3:24599206-24599225 | None:intergenic | 60.0% |
| !! | CTCTAGGACTAGGCGTGTCG+CGG | + | chr1.3:24599099-24599118 | MS.gene063253:intron | 60.0% |
| !! | GCACGGACACCTCTAGGACT+AGG | + | chr1.3:24599089-24599108 | MS.gene063253:intron | 60.0% |
| !! | GCTCCCGATACTTGATGGCG+AGG | + | chr1.3:24599800-24599819 | MS.gene063253:CDS | 60.0% |
| ATGGCTCCGTCTACGGACCC+AGG | + | chr1.3:24600339-24600358 | MS.gene063253:intron | 65.0% | |
| CGCGACACGCCTAGTCCTAG+AGG | - | chr1.3:24599101-24599120 | None:intergenic | 65.0% | |
| TGGCTCCGTCTACGGACCCA+GGG | + | chr1.3:24600340-24600359 | MS.gene063253:intron | 65.0% | |
| GCGGTGTCCGTGTCGTGTCG+TGG | + | chr1.3:24599585-24599604 | MS.gene063253:intron | 70.0% | |
| GGCTCCGTCTACGGACCCAG+GGG | + | chr1.3:24600341-24600360 | MS.gene063253:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 24596895 | 24601551 | 24596895 | ID=MS.gene063253 |
| chr1.3 | mRNA | 24596895 | 24601551 | 24596895 | ID=MS.gene063253.t1;Parent=MS.gene063253 |
| chr1.3 | exon | 24596895 | 24597005 | 24596895 | ID=MS.gene063253.t1.exon1;Parent=MS.gene063253.t1 |
| chr1.3 | CDS | 24596895 | 24597005 | 24596895 | ID=cds.MS.gene063253.t1;Parent=MS.gene063253.t1 |
| chr1.3 | exon | 24598019 | 24598105 | 24598019 | ID=MS.gene063253.t1.exon2;Parent=MS.gene063253.t1 |
| chr1.3 | CDS | 24598019 | 24598105 | 24598019 | ID=cds.MS.gene063253.t1;Parent=MS.gene063253.t1 |
| chr1.3 | exon | 24598655 | 24598708 | 24598655 | ID=MS.gene063253.t1.exon3;Parent=MS.gene063253.t1 |
| chr1.3 | CDS | 24598655 | 24598708 | 24598655 | ID=cds.MS.gene063253.t1;Parent=MS.gene063253.t1 |
| chr1.3 | exon | 24598821 | 24598966 | 24598821 | ID=MS.gene063253.t1.exon4;Parent=MS.gene063253.t1 |
| chr1.3 | CDS | 24598821 | 24598966 | 24598821 | ID=cds.MS.gene063253.t1;Parent=MS.gene063253.t1 |
| chr1.3 | exon | 24599671 | 24599821 | 24599671 | ID=MS.gene063253.t1.exon5;Parent=MS.gene063253.t1 |
| chr1.3 | CDS | 24599671 | 24599821 | 24599671 | ID=cds.MS.gene063253.t1;Parent=MS.gene063253.t1 |
| chr1.3 | exon | 24599955 | 24600092 | 24599955 | ID=MS.gene063253.t1.exon6;Parent=MS.gene063253.t1 |
| chr1.3 | CDS | 24599955 | 24600092 | 24599955 | ID=cds.MS.gene063253.t1;Parent=MS.gene063253.t1 |
| chr1.3 | exon | 24601006 | 24601077 | 24601006 | ID=MS.gene063253.t1.exon7;Parent=MS.gene063253.t1 |
| chr1.3 | CDS | 24601006 | 24601077 | 24601006 | ID=cds.MS.gene063253.t1;Parent=MS.gene063253.t1 |
| chr1.3 | exon | 24601216 | 24601289 | 24601216 | ID=MS.gene063253.t1.exon8;Parent=MS.gene063253.t1 |
| chr1.3 | CDS | 24601216 | 24601289 | 24601216 | ID=cds.MS.gene063253.t1;Parent=MS.gene063253.t1 |
| chr1.3 | exon | 24601380 | 24601551 | 24601380 | ID=MS.gene063253.t1.exon9;Parent=MS.gene063253.t1 |
| chr1.3 | CDS | 24601380 | 24601551 | 24601380 | ID=cds.MS.gene063253.t1;Parent=MS.gene063253.t1 |
| Gene Sequence |
| Protein sequence |
