Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053334.t1 | XP_013467029.1 | 93.2 | 397 | 8 | 1 | 1 | 378 | 1 | 397 | 4.60E-207 | 730.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053334.t1 | Q9UKZ1 | 38.0 | 397 | 203 | 12 | 6 | 378 | 63 | 440 | 3.6e-51 | 203.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053334.t1 | A0A072VGA3 | 93.2 | 397 | 8 | 1 | 1 | 378 | 1 | 397 | 3.3e-207 | 730.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene053333 | MS.gene053334 | 0.879665 | 1.03E-69 | -1.69E-46 |
MS.gene053334 | MS.gene063253 | 0.890217 | 1.20E-73 | -1.69E-46 |
MS.gene053334 | MS.gene56098 | 0.831674 | 1.46E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053334.t1 | MTR_1g041405 | 93.199 | 397 | 8 | 1 | 1 | 378 | 1 | 397 | 0.0 | 753 |
MS.gene053334.t1 | MTR_1g041405 | 92.000 | 350 | 9 | 1 | 1 | 331 | 1 | 350 | 0.0 | 650 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053334.t1 | AT5G18420 | 52.279 | 373 | 178 | 0 | 6 | 378 | 9 | 381 | 4.83e-144 | 416 |
MS.gene053334.t1 | AT5G18420 | 52.279 | 373 | 178 | 0 | 6 | 378 | 9 | 381 | 5.45e-144 | 416 |
MS.gene053334.t1 | AT5G18420 | 52.011 | 373 | 176 | 1 | 6 | 378 | 9 | 378 | 5.62e-141 | 408 |
MS.gene053334.t1 | AT5G18420 | 48.160 | 326 | 169 | 0 | 6 | 331 | 9 | 334 | 3.61e-114 | 337 |
Find 94 sgRNAs with CRISPR-Local
Find 394 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATGAATCTGTATCACAATT+TGG | 0.161000 | 1.2:-25868711 | None:intergenic |
CACTGCTTCATCTTTATTTC+CGG | 0.181836 | 1.2:-25869479 | None:intergenic |
AAAATACCTCTTTGCCATTA+TGG | 0.183131 | 1.2:-25867860 | None:intergenic |
CCCATTTCAGCAATTCCTTT+TGG | 0.204315 | 1.2:+25870766 | MS.gene053334:intron |
GAGAATTTCAACTGCAATTA+GGG | 0.204802 | 1.2:-25871005 | None:intergenic |
TGAGAATTTCAACTGCAATT+AGG | 0.207484 | 1.2:-25871006 | None:intergenic |
AAGGATTTGAAGCCGGATTC+TGG | 0.267414 | 1.2:-25866733 | None:intergenic |
ATGAATCTGTATCACAATTT+GGG | 0.286687 | 1.2:-25868710 | None:intergenic |
AAATACCTCTTTGCCATTAT+GGG | 0.291176 | 1.2:-25867859 | None:intergenic |
ACACGTACCGGCAACTTTCT+TGG | 0.293022 | 1.2:-25870833 | None:intergenic |
CTTTACAGTACTTGTCAATA+TGG | 0.293533 | 1.2:+25871153 | MS.gene053334:CDS |
TTACCTCCCCATCCTCCTTC+AGG | 0.308872 | 1.2:+25865081 | MS.gene053334:CDS |
TCTTTAAACAAATGATGATA+TGG | 0.317716 | 1.2:-25868648 | None:intergenic |
GCGTTTATTCTGCAACTATT+AGG | 0.329631 | 1.2:+25867825 | MS.gene053334:CDS |
ATAAGCTCGGGGTAGTCATT+AGG | 0.333794 | 1.2:-25869740 | None:intergenic |
CCAAGTTTAGGCTGTGTTCC+AGG | 0.390651 | 1.2:-25869454 | None:intergenic |
CCAAGGCTCCCGATACTTGA+TGG | 0.408616 | 1.2:+25869565 | MS.gene053334:CDS |
ATAATCACCTCTTGCTGTAC+AGG | 0.414225 | 1.2:-25869848 | None:intergenic |
GGCTTATTCATCCCAGAATC+CGG | 0.414456 | 1.2:+25866721 | MS.gene053334:CDS |
TATCATCATTTGTTTAAAGA+TGG | 0.424584 | 1.2:+25868651 | MS.gene053334:CDS |
TAAGCTCGGGGTAGTCATTA+GGG | 0.429964 | 1.2:-25869739 | None:intergenic |
CCACAGTGATATACAACCTT+TGG | 0.432590 | 1.2:-25870803 | None:intergenic |
ATGACTACCCCGAGCTTATG+TGG | 0.434285 | 1.2:+25869744 | MS.gene053334:CDS |
CTAGTAGAGGGGCTGCAGTA+AGG | 0.443465 | 1.2:+25869789 | MS.gene053334:CDS |
AGGATTTGAAGCCGGATTCT+GGG | 0.445204 | 1.2:-25866732 | None:intergenic |
TTATTTCCGGTGCCAAGTTT+AGG | 0.450510 | 1.2:-25869466 | None:intergenic |
CGTAAATACCTGAAGGAGGA+TGG | 0.451873 | 1.2:-25865089 | None:intergenic |
ACTGACTCCAAGAAAGTTGC+CGG | 0.464679 | 1.2:+25870826 | MS.gene053334:CDS |
CCTGGAACACAGCCTAAACT+TGG | 0.467985 | 1.2:+25869454 | MS.gene053334:CDS |
ATTCAATGGAAGTTGTGAAC+AGG | 0.470837 | 1.2:+25871188 | MS.gene053334:CDS |
GGACATGAGTCTACATTCAA+TGG | 0.474092 | 1.2:+25871174 | MS.gene053334:CDS |
TGGAAGGATTGAACCCTCAC+TGG | 0.483292 | 1.2:+25869527 | MS.gene053334:CDS |
CTTATTGTCAAATATTTCAC+TGG | 0.488068 | 1.2:+25869507 | MS.gene053334:CDS |
TCAAGTATCGGGAGCCTTGG+TGG | 0.495802 | 1.2:-25869562 | None:intergenic |
CTTATGAAAGGATTTGAAGC+CGG | 0.499316 | 1.2:-25866740 | None:intergenic |
GGTGTTGATGTATCCCATAA+TGG | 0.499372 | 1.2:+25867846 | MS.gene053334:CDS |
CGCTATTAATCTCTCGTTGG+TGG | 0.499459 | 1.2:-25866681 | None:intergenic |
CTTAATTGCAAAAGCTCAGA+AGG | 0.503092 | 1.2:+25869814 | MS.gene053334:CDS |
AATAGGTTTGATCAGCGACC+TGG | 0.508059 | 1.2:+25869436 | MS.gene053334:intron |
ATCGGGAGCCTTGGTGGAAG+AGG | 0.511773 | 1.2:-25869556 | None:intergenic |
TTACAGGCTTCCTGTCATGA+AGG | 0.511927 | 1.2:+25867783 | MS.gene053334:intron |
AATGCATACTCTGATATGTC+AGG | 0.512674 | 1.2:-25871046 | None:intergenic |
TTGTCAAATATTTCACTGGA+AGG | 0.512810 | 1.2:+25869511 | MS.gene053334:CDS |
TAGTAGAGGGGCTGCAGTAA+GGG | 0.513261 | 1.2:+25869790 | MS.gene053334:CDS |
ATACCTCGCCATCAAGTATC+GGG | 0.514225 | 1.2:-25869573 | None:intergenic |
TACAGGCTTCCTGTCATGAA+GGG | 0.514425 | 1.2:+25867784 | MS.gene053334:intron |
CCATCAAGTATCGGGAGCCT+TGG | 0.519598 | 1.2:-25869565 | None:intergenic |
ACCATTGTCCCACATAAGCT+CGG | 0.522735 | 1.2:-25869753 | None:intergenic |
CCATTGTCCCACATAAGCTC+GGG | 0.525577 | 1.2:-25869752 | None:intergenic |
AATACCTCGCCATCAAGTAT+CGG | 0.543271 | 1.2:-25869574 | None:intergenic |
TTTATGATAAAGCTTATGAA+AGG | 0.545065 | 1.2:-25866752 | None:intergenic |
GATCCCGTGCAAGCTCCAAA+AGG | 0.558073 | 1.2:-25870781 | None:intergenic |
GTAAATACCTGAAGGAGGAT+GGG | 0.560127 | 1.2:-25865088 | None:intergenic |
ACTGCAGTTTCTTAAACAGT+CGG | 0.560584 | 1.2:+25868418 | MS.gene053334:intron |
GGAGCTTGCACGGGATCCAA+AGG | 0.564350 | 1.2:+25870787 | MS.gene053334:CDS |
AATAAATCATGTTACAGCAA+AGG | 0.565375 | 1.2:-25871305 | None:intergenic |
TGCTTCAACTGATCTAGTGA+AGG | 0.568307 | 1.2:-25868597 | None:intergenic |
AATAAAGATGAAGCAGTGGT+TGG | 0.571459 | 1.2:+25869484 | MS.gene053334:CDS |
AGAGTGTAATGGCGAGAGTG+AGG | 0.572224 | 1.2:-25865052 | None:intergenic |
ATCATCCTGTGTGAACATCA+AGG | 0.588770 | 1.2:+25871270 | MS.gene053334:CDS |
TAAATACCTGAAGGAGGATG+GGG | 0.590079 | 1.2:-25865087 | None:intergenic |
AAACGCTATTAATCTCTCGT+TGG | 0.594956 | 1.2:-25866684 | None:intergenic |
ATGGCGAGAGTGAGGAATGG+TGG | 0.595698 | 1.2:-25865044 | None:intergenic |
TGAATCTGTATCACAATTTG+GGG | 0.599720 | 1.2:-25868709 | None:intergenic |
TATTCTCTATCAGGAACTGG+TGG | 0.600122 | 1.2:+25870973 | MS.gene053334:intron |
ATGTGCGTTGATACTAGTAG+AGG | 0.600614 | 1.2:+25869776 | MS.gene053334:CDS |
AGCGTTTGCTCTGCTAGTTG+AGG | 0.605843 | 1.2:+25866700 | MS.gene053334:CDS |
TGACTACCCCGAGCTTATGT+GGG | 0.608574 | 1.2:+25869745 | MS.gene053334:CDS |
TCTTGCACCTGTACAGCAAG+AGG | 0.609228 | 1.2:+25869841 | MS.gene053334:CDS |
ACACAGCCTAAACTTGGCAC+CGG | 0.610220 | 1.2:+25869460 | MS.gene053334:CDS |
CCCGAGCTTATGTGGGACAA+TGG | 0.613988 | 1.2:+25869752 | MS.gene053334:CDS |
TGTGCGTTGATACTAGTAGA+GGG | 0.616078 | 1.2:+25869777 | MS.gene053334:CDS |
CGGAAATAAAGATGAAGCAG+TGG | 0.618683 | 1.2:+25869480 | MS.gene053334:CDS |
GGTAAGAACAGAGAGTGTAA+TGG | 0.620404 | 1.2:-25865063 | None:intergenic |
GCTTCAACTGATCTAGTGAA+GGG | 0.620688 | 1.2:-25868596 | None:intergenic |
GCTCCCGATACTTGATGGCG+AGG | 0.628235 | 1.2:+25869570 | MS.gene053334:CDS |
TGTATCCCATAATGGCAAAG+AGG | 0.640235 | 1.2:+25867854 | MS.gene053334:CDS |
AGAATTTCAACTGCAATTAG+GGG | 0.640657 | 1.2:-25871004 | None:intergenic |
ATACCTGAAGGAGGATGGGG+AGG | 0.646330 | 1.2:-25865084 | None:intergenic |
TCAGCGAGGATCTCATTGAG+AGG | 0.650902 | 1.2:-25865013 | None:intergenic |
GGATTAGACCTCTTCCACCA+AGG | 0.651322 | 1.2:+25869548 | MS.gene053334:CDS |
AAGTAACTTACATTCAGTGA+CGG | 0.653960 | 1.2:-25868467 | None:intergenic |
TACATGTGAATGAATTCTGA+CGG | 0.655091 | 1.2:-25871232 | None:intergenic |
GAAGAGGTCTAATCCAGTGA+GGG | 0.663114 | 1.2:-25869540 | None:intergenic |
AAATCGTAAATACCTGAAGG+AGG | 0.666534 | 1.2:-25865093 | None:intergenic |
TTAATTGCAAAAGCTCAGAA+GGG | 0.683329 | 1.2:+25869815 | MS.gene053334:CDS |
GTAATGGCGAGAGTGAGGAA+TGG | 0.688538 | 1.2:-25865047 | None:intergenic |
GTGCGTTGATACTAGTAGAG+GGG | 0.694698 | 1.2:+25869778 | MS.gene053334:CDS |
GGAAGAGGTCTAATCCAGTG+AGG | 0.700569 | 1.2:-25869541 | None:intergenic |
CATTGTCCCACATAAGCTCG+GGG | 0.705703 | 1.2:-25869751 | None:intergenic |
AAGTACCTTGATGTTCACAC+AGG | 0.718063 | 1.2:-25871275 | None:intergenic |
CCAAAGGTTGTATATCACTG+TGG | 0.722141 | 1.2:+25870803 | MS.gene053334:CDS |
TGGTGGATTTGAATTCAGCG+AGG | 0.746032 | 1.2:-25865027 | None:intergenic |
GAATCTGTATCACAATTTGG+GGG | 0.804690 | 1.2:-25868708 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAGAAAAAAACAATTATTT+AGG | - | chr1.2:25868942-25868961 | None:intergenic | 10.0% |
!! | AAGAAATAAAAAAAATTACT+TGG | - | chr1.2:25870610-25870629 | None:intergenic | 10.0% |
!! | AATTCTAATTGTATAATTTA+AGG | - | chr1.2:25867393-25867412 | None:intergenic | 10.0% |
!! | ATAAATTAACATATATGTAA+CGG | + | chr1.2:25869297-25869316 | MS.gene053334:intron | 10.0% |
!! | TAAATTATACAATTAGAATT+TGG | + | chr1.2:25867393-25867412 | MS.gene053334:intron | 10.0% |
!!! | TATTTTAAGTAATTGATTTT+GGG | + | chr1.2:25870914-25870933 | MS.gene053334:intron | 10.0% |
!!! | TGTTTAATTATTAGTTTATT+GGG | + | chr1.2:25866809-25866828 | MS.gene053334:intron | 10.0% |
!!! | TTGTTTAATTATTAGTTTAT+TGG | + | chr1.2:25866808-25866827 | MS.gene053334:intron | 10.0% |
!! | AAGAAAAAAAAAGAAAAGAT+GGG | + | chr1.2:25866943-25866962 | MS.gene053334:intron | 15.0% |
!! | AATATATAGATATTATGGAA+GGG | - | chr1.2:25868538-25868557 | None:intergenic | 15.0% |
!! | AATTGATATTGTATCAATTT+AGG | + | chr1.2:25865641-25865660 | MS.gene053334:intron | 15.0% |
!! | ATTGATATTGTATCAATTTA+GGG | + | chr1.2:25865642-25865661 | MS.gene053334:intron | 15.0% |
!! | TGTAATAAACAATAAATGTT+AGG | - | chr1.2:25870293-25870312 | None:intergenic | 15.0% |
!!! | AATTGATTTTGTATCAATTT+AGG | + | chr1.2:25865366-25865385 | MS.gene053334:intron | 15.0% |
!!! | AGTTTTAAATGTTGTTTAAT+TGG | + | chr1.2:25866626-25866645 | MS.gene053334:intron | 15.0% |
!!! | ATTGATTTTGTATCAATTTA+GGG | + | chr1.2:25865367-25865386 | MS.gene053334:intron | 15.0% |
!!! | ATTTTTTATTGGCTTTTATA+TGG | - | chr1.2:25869990-25870009 | None:intergenic | 15.0% |
!!! | GTATTTTAAGTAATTGATTT+TGG | + | chr1.2:25870913-25870932 | MS.gene053334:intron | 15.0% |
!!! | TAACTTTATGGATTTTTTAT+TGG | - | chr1.2:25870001-25870020 | None:intergenic | 15.0% |
!!! | TATTTCTATTTGCTTATTTA+TGG | + | chr1.2:25871121-25871140 | MS.gene053334:intron | 15.0% |
!!! | TTTTTTGTTAGAATCAATTA+TGG | + | chr1.2:25866061-25866080 | MS.gene053334:intron | 15.0% |
!!! | TTTTTTTTTTCTTTTCAGTT+GGG | + | chr1.2:25870581-25870600 | MS.gene053334:intron | 15.0% |
!!! | TTTTTTTTTTTCTTTTCAGT+TGG | + | chr1.2:25870580-25870599 | MS.gene053334:intron | 15.0% |
!! | AACCAGTTCTTTAAATTAAA+GGG | + | chr1.2:25866865-25866884 | MS.gene053334:intron | 20.0% |
!! | AAGCAAAAAAAGATTGATAA+AGG | + | chr1.2:25867967-25867986 | MS.gene053334:intron | 20.0% |
!! | AATAATGATGGTCTATTAAT+AGG | + | chr1.2:25869419-25869438 | MS.gene053334:intron | 20.0% |
!! | AATATTTATATGCATGTTGA+AGG | - | chr1.2:25868258-25868277 | None:intergenic | 20.0% |
!! | AGTAAGAAAAATTGAGTAAA+TGG | + | chr1.2:25867529-25867548 | MS.gene053334:intron | 20.0% |
!! | CTCAGAATATATAGATATTA+TGG | - | chr1.2:25868543-25868562 | None:intergenic | 20.0% |
!! | GAAGAAAAAAAAAGAAAAGA+TGG | + | chr1.2:25866942-25866961 | MS.gene053334:intron | 20.0% |
!! | GAATATATAGATATTATGGA+AGG | - | chr1.2:25868539-25868558 | None:intergenic | 20.0% |
!! | GAATGTAAGTTACTTATATA+TGG | + | chr1.2:25868475-25868494 | MS.gene053334:intron | 20.0% |
!! | TATCATCATTTGTTTAAAGA+TGG | + | chr1.2:25868651-25868670 | MS.gene053334:CDS | 20.0% |
!! | TCTTTAAACAAATGATGATA+TGG | - | chr1.2:25868651-25868670 | None:intergenic | 20.0% |
!! | TGTAAAATGAGATTATAAGA+TGG | + | chr1.2:25870528-25870547 | MS.gene053334:intron | 20.0% |
!! | TTTATGATAAAGCTTATGAA+AGG | - | chr1.2:25866755-25866774 | None:intergenic | 20.0% |
!! | TTTCCATTCTAAATATGAAT+GGG | - | chr1.2:25868816-25868835 | None:intergenic | 20.0% |
!!! | AATATTTCAACTGATTTCAA+TGG | - | chr1.2:25866992-25867011 | None:intergenic | 20.0% |
!!! | AATGGTAATTTTTTGTTTAC+AGG | + | chr1.2:25867767-25867786 | MS.gene053334:intron | 20.0% |
!!! | ACATAGGCTATATTTAAAAT+TGG | + | chr1.2:25866181-25866200 | MS.gene053334:intron | 20.0% |
!!! | ACTCACTTTTAAGTAAAATA+AGG | - | chr1.2:25865954-25865973 | None:intergenic | 20.0% |
!!! | ATCATTTTTAGCTTTTTTGA+TGG | + | chr1.2:25869152-25869171 | MS.gene053334:intron | 20.0% |
!!! | ATTGATTCTAACAAAAAACT+AGG | - | chr1.2:25866059-25866078 | None:intergenic | 20.0% |
!!! | ATTTGTTTTAGATATTTGTC+TGG | - | chr1.2:25869031-25869050 | None:intergenic | 20.0% |
!!! | ATTTTATAAGAAGCCAAATA+TGG | - | chr1.2:25870178-25870197 | None:intergenic | 20.0% |
!!! | CTCACTTTTAAGTAAAATAA+GGG | - | chr1.2:25865953-25865972 | None:intergenic | 20.0% |
!!! | GAATTGATTTGTTATATGTT+TGG | + | chr1.2:25865328-25865347 | MS.gene053334:intron | 20.0% |
!!! | GCTATATTTAAAATTGGTTA+TGG | + | chr1.2:25866187-25866206 | MS.gene053334:intron | 20.0% |
!!! | TACGATTTTCAATTTTTCTA+GGG | + | chr1.2:25865108-25865127 | MS.gene053334:intron | 20.0% |
!!! | TCCTATATTTTTTACATTAG+CGG | + | chr1.2:25869328-25869347 | MS.gene053334:intron | 20.0% |
!!! | TTAAATGTTTTATCTTCTAG+TGG | + | chr1.2:25868368-25868387 | MS.gene053334:intron | 20.0% |
!!! | TTACGATTTTCAATTTTTCT+AGG | + | chr1.2:25865107-25865126 | MS.gene053334:intron | 20.0% |
!!! | TTATTTCAGCTTATTTTCAT+AGG | - | chr1.2:25865560-25865579 | None:intergenic | 20.0% |
!!! | TTTGTTTTAGATATTTGTCT+GGG | - | chr1.2:25869030-25869049 | None:intergenic | 20.0% |
!!! | TTTTAAATATAGCCTATGTT+TGG | - | chr1.2:25866180-25866199 | None:intergenic | 20.0% |
!!! | TTTTCCATTCTAAATATGAA+TGG | - | chr1.2:25868817-25868836 | None:intergenic | 20.0% |
! | AAAAGAGGATAGCTTAATTA+AGG | - | chr1.2:25868151-25868170 | None:intergenic | 25.0% |
! | AACAGATATACACAGAAATT+GGG | - | chr1.2:25869949-25869968 | None:intergenic | 25.0% |
! | AAGATTAGGTGATTTATCTT+TGG | + | chr1.2:25866224-25866243 | MS.gene053334:intron | 25.0% |
! | AAGGGCAATAGATATATTAT+GGG | - | chr1.2:25868520-25868539 | None:intergenic | 25.0% |
! | AATGTAAAGTCATTTATGTC+TGG | + | chr1.2:25865976-25865995 | MS.gene053334:intron | 25.0% |
! | ACCGCTAATGTAAAAAATAT+AGG | - | chr1.2:25869332-25869351 | None:intergenic | 25.0% |
! | AGATTGACAAATTTGTACAT+AGG | + | chr1.2:25868191-25868210 | MS.gene053334:intron | 25.0% |
! | ATATGTAACTCTTGTATCTA+TGG | - | chr1.2:25869081-25869100 | None:intergenic | 25.0% |
! | ATGAATCTGTATCACAATTT+GGG | - | chr1.2:25868713-25868732 | None:intergenic | 25.0% |
! | ATGGAAAATTGAAGATTATG+CGG | + | chr1.2:25868829-25868848 | MS.gene053334:intron | 25.0% |
! | ATTAGAAATACTCTGTTTGA+GGG | + | chr1.2:25867267-25867286 | MS.gene053334:intron | 25.0% |
! | CAAGAAACTTTACAAGTTTA+TGG | + | chr1.2:25867478-25867497 | MS.gene053334:intron | 25.0% |
! | CTTATTGTCAAATATTTCAC+TGG | + | chr1.2:25869507-25869526 | MS.gene053334:CDS | 25.0% |
! | GAACCAGTTCTTTAAATTAA+AGG | + | chr1.2:25866864-25866883 | MS.gene053334:intron | 25.0% |
! | GAATTTAACTCATTTGTAGA+TGG | - | chr1.2:25867360-25867379 | None:intergenic | 25.0% |
! | GATGGTAGATGAATTAATAA+AGG | + | chr1.2:25869170-25869189 | MS.gene053334:intron | 25.0% |
! | TAGTAAATAGCTCAACAAAA+TGG | + | chr1.2:25867026-25867045 | MS.gene053334:intron | 25.0% |
! | TCATTTGACAACTAACTTTA+TGG | - | chr1.2:25870013-25870032 | None:intergenic | 25.0% |
! | TCTTATAAACTCAGTACATT+CGG | - | chr1.2:25867445-25867464 | None:intergenic | 25.0% |
! | TGAAAAGTTATATTGTACCT+TGG | + | chr1.2:25870694-25870713 | MS.gene053334:intron | 25.0% |
! | TGAGAAATTGTGATCAATTA+GGG | + | chr1.2:25869105-25869124 | MS.gene053334:intron | 25.0% |
! | TGTATCAGTTATATCATACA+CGG | + | chr1.2:25868289-25868308 | MS.gene053334:intron | 25.0% |
! | TTAAATGTGTGTGTTATGTT+CGG | - | chr1.2:25870472-25870491 | None:intergenic | 25.0% |
! | TTAATATTCTTCAGCTAGTT+TGG | + | chr1.2:25869654-25869673 | MS.gene053334:intron | 25.0% |
! | TTAATGAAAAAGCAAGAGAA+AGG | - | chr1.2:25868352-25868371 | None:intergenic | 25.0% |
! | TTGAGAAATTGTGATCAATT+AGG | + | chr1.2:25869104-25869123 | MS.gene053334:intron | 25.0% |
! | TTTCCCATTCATATTTAGAA+TGG | + | chr1.2:25868810-25868829 | MS.gene053334:intron | 25.0% |
! | TTTGTTAGAATCAATTATGG+AGG | + | chr1.2:25866064-25866083 | MS.gene053334:intron | 25.0% |
!! | ACAAATGTGTTTCTATTGAA+CGG | - | chr1.2:25867058-25867077 | None:intergenic | 25.0% |
!! | CAATCTAAAACAGAATTCAA+TGG | - | chr1.2:25868006-25868025 | None:intergenic | 25.0% |
!! | GTATCAATTTAGGGTTTATT+TGG | + | chr1.2:25865376-25865395 | MS.gene053334:intron | 25.0% |
!! | GTTCTTATTTATTCTCTATC+AGG | + | chr1.2:25870964-25870983 | MS.gene053334:intron | 25.0% |
!! | TAATATTCTTCAGCTAGTTT+GGG | + | chr1.2:25869655-25869674 | MS.gene053334:intron | 25.0% |
!!! | ACAGTCAAGGTTTTAAATAA+AGG | - | chr1.2:25866485-25866504 | None:intergenic | 25.0% |
!!! | AGAATTGATTTTGACATGTT+TGG | - | chr1.2:25866370-25866389 | None:intergenic | 25.0% |
!!! | TGATTTTTGTTGTGTATGTT+TGG | - | chr1.2:25866432-25866451 | None:intergenic | 25.0% |
!!! | TTAGTGAATGTTTTGTTATG+CGG | + | chr1.2:25865284-25865303 | MS.gene053334:intron | 25.0% |
!!! | TTGTTATATGTTTGGTTTTG+AGG | + | chr1.2:25865336-25865355 | MS.gene053334:intron | 25.0% |
!!! | TTGTTATATGTTTGGTTTTG+CGG | + | chr1.2:25865336-25865355 | MS.gene053334:intron | 25.0% |
AAAATACCTCTTTGCCATTA+TGG | - | chr1.2:25867863-25867882 | None:intergenic | 30.0% | |
AAAATTGCAAAAACACGTAC+CGG | - | chr1.2:25870848-25870867 | None:intergenic | 30.0% | |
AAATACCTCTTTGCCATTAT+GGG | - | chr1.2:25867862-25867881 | None:intergenic | 30.0% | |
AAGTAACTTACATTCAGTGA+CGG | - | chr1.2:25868470-25868489 | None:intergenic | 30.0% | |
AATTTATCTATCCACTGAAC+AGG | - | chr1.2:25868747-25868766 | None:intergenic | 30.0% | |
ACCTAAATTACATACAGTCA+AGG | - | chr1.2:25866498-25866517 | None:intergenic | 30.0% | |
ACCTTGACTGTATGTAATTT+AGG | + | chr1.2:25866494-25866513 | MS.gene053334:intron | 30.0% | |
AGAATTTCAACTGCAATTAG+GGG | - | chr1.2:25871007-25871026 | None:intergenic | 30.0% | |
AGTATGAGGGTAAATTCTTA+TGG | - | chr1.2:25870061-25870080 | None:intergenic | 30.0% | |
ATAGAAACACATTTGTAGTG+TGG | + | chr1.2:25867062-25867081 | MS.gene053334:intron | 30.0% | |
ATTTATCTATCCACTGAACA+GGG | - | chr1.2:25868746-25868765 | None:intergenic | 30.0% | |
ATTTATTCTCTATCAGGAAC+TGG | + | chr1.2:25870970-25870989 | MS.gene053334:intron | 30.0% | |
ATTTCTGTGTATATCTGTTG+AGG | + | chr1.2:25869950-25869969 | MS.gene053334:intron | 30.0% | |
CAACAGATATACACAGAAAT+TGG | - | chr1.2:25869950-25869969 | None:intergenic | 30.0% | |
CAATCTAAACCAAAATCCAA+CGG | - | chr1.2:25868177-25868196 | None:intergenic | 30.0% | |
CATTAGAAATACTCTGTTTG+AGG | + | chr1.2:25867266-25867285 | MS.gene053334:intron | 30.0% | |
CGCTGTATATGTAGAAAAAA+GGG | + | chr1.2:25870203-25870222 | MS.gene053334:intron | 30.0% | |
CTATCTCCAATCAAATATAG+TGG | - | chr1.2:25866608-25866627 | None:intergenic | 30.0% | |
CTTTACAGTACTTGTCAATA+TGG | + | chr1.2:25871153-25871172 | MS.gene053334:CDS | 30.0% | |
GAACATAACACACACATTTA+AGG | + | chr1.2:25870471-25870490 | MS.gene053334:intron | 30.0% | |
GAAGATAGTCCAATTAAGAA+GGG | + | chr1.2:25867551-25867570 | MS.gene053334:intron | 30.0% | |
GAAGGGCAATAGATATATTA+TGG | - | chr1.2:25868521-25868540 | None:intergenic | 30.0% | |
GAGAATTTCAACTGCAATTA+GGG | - | chr1.2:25871008-25871027 | None:intergenic | 30.0% | |
GATGAATCTGTATCACAATT+TGG | - | chr1.2:25868714-25868733 | None:intergenic | 30.0% | |
GTTATTCTAAATGTGTGGTA+TGG | - | chr1.2:25870141-25870160 | None:intergenic | 30.0% | |
GTTTCATACTACATTCTAAC+CGG | - | chr1.2:25867117-25867136 | None:intergenic | 30.0% | |
TAACATATATGTAACGGTGT+CGG | + | chr1.2:25869303-25869322 | MS.gene053334:intron | 30.0% | |
TACATGTGAATGAATTCTGA+CGG | - | chr1.2:25871235-25871254 | None:intergenic | 30.0% | |
TAGATTTGAGAAAAGAACCA+AGG | - | chr1.2:25870714-25870733 | None:intergenic | 30.0% | |
TCATTGATCAAGTTAGTGTT+CGG | + | chr1.2:25870875-25870894 | MS.gene053334:intron | 30.0% | |
TCGCTGTATATGTAGAAAAA+AGG | + | chr1.2:25870202-25870221 | MS.gene053334:intron | 30.0% | |
TCTAACTTGAAGCTAGAAAT+CGG | - | chr1.2:25866317-25866336 | None:intergenic | 30.0% | |
TGAAAATCGTAAATACCTGA+AGG | - | chr1.2:25865099-25865118 | None:intergenic | 30.0% | |
TGAATCTGTATCACAATTTG+GGG | - | chr1.2:25868712-25868731 | None:intergenic | 30.0% | |
TGAGAATTTCAACTGCAATT+AGG | - | chr1.2:25871009-25871028 | None:intergenic | 30.0% | |
TGTCTGTTATTCTAAATGTG+TGG | - | chr1.2:25870146-25870165 | None:intergenic | 30.0% | |
TTAATTGCAAAAGCTCAGAA+GGG | + | chr1.2:25869815-25869834 | MS.gene053334:CDS | 30.0% | |
TTGTCAAATATTTCACTGGA+AGG | + | chr1.2:25869511-25869530 | MS.gene053334:CDS | 30.0% | |
TTGTCAAATGAACCAAATAG+TGG | + | chr1.2:25870022-25870041 | MS.gene053334:intron | 30.0% | |
TTTACTAGATCATGTTAAGC+TGG | + | chr1.2:25867317-25867336 | MS.gene053334:intron | 30.0% | |
TTTCTAATGTCAAAAACTCC+CGG | - | chr1.2:25867255-25867274 | None:intergenic | 30.0% | |
TTTCTTCATTGTCTTCATGA+AGG | - | chr1.2:25866929-25866948 | None:intergenic | 30.0% | |
TTTGCTTATGAATCAATCAG+AGG | - | chr1.2:25870555-25870574 | None:intergenic | 30.0% | |
! | AAAGTACTAATCACGATAAG+CGG | + | chr1.2:25865702-25865721 | MS.gene053334:intron | 30.0% |
! | AAAGTGCTAATCATGATAAG+CGG | + | chr1.2:25865427-25865446 | MS.gene053334:intron | 30.0% |
! | AATTGGAATCTTTTACATGC+AGG | + | chr1.2:25866643-25866662 | MS.gene053334:intron | 30.0% |
! | ACACCTCCATAATCAATTTT+GGG | + | chr1.2:25866135-25866154 | MS.gene053334:intron | 30.0% |
! | CACTCTAGTTTAATTCTTTG+TGG | + | chr1.2:25865139-25865158 | MS.gene053334:intron | 30.0% |
! | CTCCCTTTAATTTAAAGAAC+TGG | - | chr1.2:25866870-25866889 | None:intergenic | 30.0% |
! | GTATCAATTTAGGGTTTGTT+TGG | + | chr1.2:25865651-25865670 | MS.gene053334:intron | 30.0% |
! | GTGTTGTTCATCTTGATATT+GGG | + | chr1.2:25865217-25865236 | MS.gene053334:intron | 30.0% |
! | TACACCGCTAAAATCAATTT+TGG | + | chr1.2:25866389-25866408 | MS.gene053334:intron | 30.0% |
! | TACACCTCCATAATCAATTT+TGG | + | chr1.2:25866134-25866153 | MS.gene053334:intron | 30.0% |
! | TGTGTTGTTCATCTTGATAT+TGG | + | chr1.2:25865216-25865235 | MS.gene053334:intron | 30.0% |
! | TTTGTCTCATTTGTTTGTTG+TGG | + | chr1.2:25868101-25868120 | MS.gene053334:intron | 30.0% |
! | TTTTACACAAACAAAGTTGC+AGG | - | chr1.2:25870515-25870534 | None:intergenic | 30.0% |
! | TTTTGGCCACTATATTTGAT+TGG | + | chr1.2:25866599-25866618 | MS.gene053334:intron | 30.0% |
!! | CTAAAATCGAGTTGAAGATT+AGG | + | chr1.2:25866210-25866229 | MS.gene053334:intron | 30.0% |
!! | GCTTCTATAATCTATTTCTG+CGG | + | chr1.2:25867726-25867745 | MS.gene053334:intron | 30.0% |
!! | TATGCGGTTGATAATAATGA+TGG | + | chr1.2:25869407-25869426 | MS.gene053334:intron | 30.0% |
!! | TTAAGTTTTGTGAGACTCTT+TGG | - | chr1.2:25865897-25865916 | None:intergenic | 30.0% |
!! | TTCTAGCTTCAAGTTAGAAT+AGG | + | chr1.2:25866319-25866338 | MS.gene053334:intron | 30.0% |
!! | TTGTTGCATGTGTTTGTTTT+TGG | + | chr1.2:25866582-25866601 | MS.gene053334:intron | 30.0% |
AAAATCCAACGGCTAAAAAG+AGG | - | chr1.2:25868166-25868185 | None:intergenic | 35.0% | |
AAACGCTATTAATCTCTCGT+TGG | - | chr1.2:25866687-25866706 | None:intergenic | 35.0% | |
AAATCGTAAATACCTGAAGG+AGG | - | chr1.2:25865096-25865115 | None:intergenic | 35.0% | |
AAATGAACCAAATAGTGGTG+TGG | + | chr1.2:25870027-25870046 | MS.gene053334:intron | 35.0% | |
AACATCAAACCCTAACTGAT+AGG | - | chr1.2:25870942-25870961 | None:intergenic | 35.0% | |
AAGAAAAAAGTGACGTGCAA+GGG | + | chr1.2:25866890-25866909 | MS.gene053334:intron | 35.0% | |
AAGTAAAATAAGGGCCTGTT+AGG | - | chr1.2:25865944-25865963 | None:intergenic | 35.0% | |
AATAAAGATGAAGCAGTGGT+TGG | + | chr1.2:25869484-25869503 | MS.gene053334:CDS | 35.0% | |
AATGCATACTCTGATATGTC+AGG | - | chr1.2:25871049-25871068 | None:intergenic | 35.0% | |
ACAACAACAGTGTAAAACAC+AGG | - | chr1.2:25867906-25867925 | None:intergenic | 35.0% | |
ACCTGAACTTTAAGTAACTG+CGG | + | chr1.2:25867208-25867227 | MS.gene053334:intron | 35.0% | |
ACTCATTTATAAGAGACTGC+TGG | + | chr1.2:25868037-25868056 | MS.gene053334:intron | 35.0% | |
ACTGCAGTTTCTTAAACAGT+CGG | + | chr1.2:25868418-25868437 | MS.gene053334:intron | 35.0% | |
ATGGAAAGGGTTTACCATTT+GGG | - | chr1.2:25869685-25869704 | None:intergenic | 35.0% | |
ATGTTAGGAGAAACAGATCA+TGG | - | chr1.2:25870278-25870297 | None:intergenic | 35.0% | |
ATTCAATGGAAGTTGTGAAC+AGG | + | chr1.2:25871188-25871207 | MS.gene053334:CDS | 35.0% | |
ATTCATCACAACCATTAACG+GGG | + | chr1.2:25870226-25870245 | MS.gene053334:intron | 35.0% | |
CAAAAGGAATTGCTGAAATG+GGG | - | chr1.2:25870768-25870787 | None:intergenic | 35.0% | |
CAACAACGACTGAATTTAGA+TGG | - | chr1.2:25867650-25867669 | None:intergenic | 35.0% | |
CCAAAAGGAATTGCTGAAAT+GGG | - | chr1.2:25870769-25870788 | None:intergenic | 35.0% | |
CCAAAGACTACTTTGCTTTA+TGG | - | chr1.2:25867606-25867625 | None:intergenic | 35.0% | |
CCAATTAAGAAGGGAGAAAA+AGG | + | chr1.2:25867560-25867579 | MS.gene053334:intron | 35.0% | |
CCATAAAGCAAAGTAGTCTT+TGG | + | chr1.2:25867603-25867622 | MS.gene053334:intron | 35.0% | |
CGATGGATGGCATTATTATT+AGG | + | chr1.2:25867939-25867958 | MS.gene053334:intron | 35.0% | |
CTTAAAATACCCTCTCATAC+TGG | - | chr1.2:25870903-25870922 | None:intergenic | 35.0% | |
CTTAATTGCAAAAGCTCAGA+AGG | + | chr1.2:25869814-25869833 | MS.gene053334:CDS | 35.0% | |
GAATCTGTATCACAATTTGG+GGG | - | chr1.2:25868711-25868730 | None:intergenic | 35.0% | |
GATACAGATTCATCAGAGTA+TGG | + | chr1.2:25868720-25868739 | MS.gene053334:intron | 35.0% | |
GATATGCTGTACATATTCCT+TGG | + | chr1.2:25870650-25870669 | MS.gene053334:intron | 35.0% | |
GATTCATCACAACCATTAAC+GGG | + | chr1.2:25870225-25870244 | MS.gene053334:intron | 35.0% | |
GCGTTTATTCTGCAACTATT+AGG | + | chr1.2:25867825-25867844 | MS.gene053334:CDS | 35.0% | |
GGAAGATAGTCCAATTAAGA+AGG | + | chr1.2:25867550-25867569 | MS.gene053334:intron | 35.0% | |
GGATTCATCACAACCATTAA+CGG | + | chr1.2:25870224-25870243 | MS.gene053334:intron | 35.0% | |
GTTTATAAGAGTTTACGCTG+AGG | + | chr1.2:25867455-25867474 | MS.gene053334:intron | 35.0% | |
TAGTGACTGAGTATTAGCTA+AGG | - | chr1.2:25871091-25871110 | None:intergenic | 35.0% | |
TCAAACAAGTCAATCCTAAC+AGG | + | chr1.2:25865927-25865946 | MS.gene053334:intron | 35.0% | |
TCCAAAAACAGTTTCTTCAC+AGG | - | chr1.2:25867139-25867158 | None:intergenic | 35.0% | |
TCCAAAAGGAATTGCTGAAA+TGG | - | chr1.2:25870770-25870789 | None:intergenic | 35.0% | |
TTAAATAAAGGTCGCCATGT+GGG | - | chr1.2:25866473-25866492 | None:intergenic | 35.0% | |
TTTAAATAAAGGTCGCCATG+TGG | - | chr1.2:25866474-25866493 | None:intergenic | 35.0% | |
! | AAACGCCTTCTCAATTTTTG+TGG | - | chr1.2:25867811-25867830 | None:intergenic | 35.0% |
! | AATTTAGGTATCGTTGTGCT+GGG | + | chr1.2:25866509-25866528 | MS.gene053334:intron | 35.0% |
! | ACCTGTGAAGAAACTGTTTT+TGG | + | chr1.2:25867135-25867154 | MS.gene053334:intron | 35.0% |
! | CACTGCTTCATCTTTATTTC+CGG | - | chr1.2:25869482-25869501 | None:intergenic | 35.0% |
! | CCTTTTTCTCCCTTCTTAAT+TGG | - | chr1.2:25867563-25867582 | None:intergenic | 35.0% |
! | CGTTCTTTGTTGGTTAAACA+TGG | + | chr1.2:25868217-25868236 | MS.gene053334:intron | 35.0% |
! | CTTATGAAAGGATTTGAAGC+CGG | - | chr1.2:25866743-25866762 | None:intergenic | 35.0% |
! | CTTTTACATGCAGGACAATA+AGG | + | chr1.2:25866652-25866671 | MS.gene053334:intron | 35.0% |
! | TAATTTAGGTATCGTTGTGC+TGG | + | chr1.2:25866508-25866527 | MS.gene053334:intron | 35.0% |
! | TTAAGGTACTTGTATCAGAG+AGG | - | chr1.2:25868134-25868153 | None:intergenic | 35.0% |
! | TTGTCACTTATCACTTACGA+TGG | + | chr1.2:25867922-25867941 | MS.gene053334:intron | 35.0% |
!! | CTCCATAATCAATTTTGGGT+GGG | + | chr1.2:25866139-25866158 | MS.gene053334:intron | 35.0% |
!! | GGAGCCAAAATTGATTTTAG+CGG | - | chr1.2:25866396-25866415 | None:intergenic | 35.0% |
!! | TCTTTTTAGCCGTTGGATTT+TGG | + | chr1.2:25868165-25868184 | MS.gene053334:intron | 35.0% |
!! | TGAAAAGCGTTTACCATAGA+TGG | - | chr1.2:25869704-25869723 | None:intergenic | 35.0% |
!! | TGTATGTTTGGTTCCACTTT+TGG | - | chr1.2:25866420-25866439 | None:intergenic | 35.0% |
!!! | ATTTTGGGTTCCTATCAGTT+AGG | + | chr1.2:25870929-25870948 | MS.gene053334:intron | 35.0% |
!!! | TTTTGGGTTCCTATCAGTTA+GGG | + | chr1.2:25870930-25870949 | MS.gene053334:intron | 35.0% |
AACCATTAACGGGGAAATCA+AGG | + | chr1.2:25870235-25870254 | MS.gene053334:intron | 40.0% | |
AACCGCATAACTATGAAGCA+CGG | - | chr1.2:25869396-25869415 | None:intergenic | 40.0% | |
AAGTACCTTGATGTTCACAC+AGG | - | chr1.2:25871278-25871297 | None:intergenic | 40.0% | |
AATACCTCGCCATCAAGTAT+CGG | - | chr1.2:25869577-25869596 | None:intergenic | 40.0% | |
ACATAGGATGCGTTCTTTGT+TGG | + | chr1.2:25868207-25868226 | MS.gene053334:intron | 40.0% | |
ACCATTAACGGGGAAATCAA+GGG | + | chr1.2:25870236-25870255 | MS.gene053334:intron | 40.0% | |
ACTCTTGTATCTATGGTGTG+CGG | - | chr1.2:25869074-25869093 | None:intergenic | 40.0% | |
AGAAAAAAGTGACGTGCAAG+GGG | + | chr1.2:25866891-25866910 | MS.gene053334:intron | 40.0% | |
AGCGTTTACCATAGATGGAA+AGG | - | chr1.2:25869699-25869718 | None:intergenic | 40.0% | |
AGGGTCCACAAAAATTGAGA+AGG | + | chr1.2:25867803-25867822 | MS.gene053334:CDS | 40.0% | |
ATCAGGAAGGTTCTCTTAGA+TGG | - | chr1.2:25867090-25867109 | None:intergenic | 40.0% | |
ATCATCCTGTGTGAACATCA+AGG | + | chr1.2:25871270-25871289 | MS.gene053334:CDS | 40.0% | |
ATCTAAGAGAACCTTCCTGA+TGG | + | chr1.2:25867089-25867108 | MS.gene053334:intron | 40.0% | |
ATCTAGTAAAAAGCCCAACC+AGG | - | chr1.2:25867307-25867326 | None:intergenic | 40.0% | |
CACCCACCCAAAATTGATTA+TGG | - | chr1.2:25866144-25866163 | None:intergenic | 40.0% | |
CACTTATCACTTACGATGGA+TGG | + | chr1.2:25867926-25867945 | MS.gene053334:intron | 40.0% | |
CCAAAGGTTGTATATCACTG+TGG | + | chr1.2:25870803-25870822 | MS.gene053334:CDS | 40.0% | |
CCAAATCTTTCTACGCCATA+AGG | + | chr1.2:25870386-25870405 | MS.gene053334:intron | 40.0% | |
CCACAGTGATATACAACCTT+TGG | - | chr1.2:25870806-25870825 | None:intergenic | 40.0% | |
CCACCCAAAATTGATTATGG+AGG | - | chr1.2:25866141-25866160 | None:intergenic | 40.0% | |
CCTTATGGCGTAGAAAGATT+TGG | - | chr1.2:25870389-25870408 | None:intergenic | 40.0% | |
CGGAAATAAAGATGAAGCAG+TGG | + | chr1.2:25869480-25869499 | MS.gene053334:CDS | 40.0% | |
CTCACCAAAGGTAGTTTACA+TGG | + | chr1.2:25870090-25870109 | MS.gene053334:intron | 40.0% | |
GAAGAAAAAAGTGACGTGCA+AGG | + | chr1.2:25866889-25866908 | MS.gene053334:intron | 40.0% | |
GACAAACAGTCTGCCATATT+TGG | + | chr1.2:25870162-25870181 | MS.gene053334:intron | 40.0% | |
GATGGAAAGGGTTTACCATT+TGG | - | chr1.2:25869686-25869705 | None:intergenic | 40.0% | |
GCATGTTTCAATTTGAGCCA+AGG | - | chr1.2:25870670-25870689 | None:intergenic | 40.0% | |
GCGTTTACCATAGATGGAAA+GGG | - | chr1.2:25869698-25869717 | None:intergenic | 40.0% | |
GCTAAGGACAGAGATATATG+AGG | - | chr1.2:25871075-25871094 | None:intergenic | 40.0% | |
GCTTCAACTGATCTAGTGAA+GGG | - | chr1.2:25868599-25868618 | None:intergenic | 40.0% | |
GGACATGAGTCTACATTCAA+TGG | + | chr1.2:25871174-25871193 | MS.gene053334:CDS | 40.0% | |
GTAAATACCTGAAGGAGGAT+GGG | - | chr1.2:25865091-25865110 | None:intergenic | 40.0% | |
TAAATACCTGAAGGAGGATG+GGG | - | chr1.2:25865090-25865109 | None:intergenic | 40.0% | |
TACTTATCTTCTCTGATGCC+AGG | + | chr1.2:25868569-25868588 | MS.gene053334:intron | 40.0% | |
TACTTCAACACTCCTACGAT+CGG | + | chr1.2:25868961-25868980 | MS.gene053334:intron | 40.0% | |
TATGAGTGTTACACAGGTGT+CGG | - | chr1.2:25868990-25869009 | None:intergenic | 40.0% | |
TATTCTCTATCAGGAACTGG+TGG | + | chr1.2:25870973-25870992 | MS.gene053334:intron | 40.0% | |
TGAGTTCAGTCTGAGTATGA+GGG | - | chr1.2:25870074-25870093 | None:intergenic | 40.0% | |
TGCAAAGTGCAACCAAACAT+AGG | + | chr1.2:25866165-25866184 | MS.gene053334:intron | 40.0% | |
TGCTTCAACTGATCTAGTGA+AGG | - | chr1.2:25868600-25868619 | None:intergenic | 40.0% | |
TGGTAAACCCTTTCCATCTA+TGG | + | chr1.2:25869688-25869707 | MS.gene053334:intron | 40.0% | |
TGTATCCCATAATGGCAAAG+AGG | + | chr1.2:25867854-25867873 | MS.gene053334:CDS | 40.0% | |
TTAAGCGTTATCCCACTTCA+AGG | + | chr1.2:25870360-25870379 | MS.gene053334:intron | 40.0% | |
! | ATAATCACCTCTTGCTGTAC+AGG | - | chr1.2:25869851-25869870 | None:intergenic | 40.0% |
! | ATGTGCGTTGATACTAGTAG+AGG | + | chr1.2:25869776-25869795 | MS.gene053334:CDS | 40.0% |
! | CCCATTTCAGCAATTCCTTT+TGG | + | chr1.2:25870766-25870785 | MS.gene053334:intron | 40.0% |
! | CCTCCATAATCAATTTTGGG+TGG | + | chr1.2:25866138-25866157 | MS.gene053334:intron | 40.0% |
! | GGTAAGAACAGAGAGTGTAA+TGG | - | chr1.2:25865066-25865085 | None:intergenic | 40.0% |
! | TAAACGCTTTTCAGCTAGCT+GGG | + | chr1.2:25869711-25869730 | MS.gene053334:intron | 40.0% |
! | TCGTGTGAAAGTGAGTTGAA+CGG | + | chr1.2:25866253-25866272 | MS.gene053334:intron | 40.0% |
! | TGGGTTTTCCATAGATGGAT+GGG | + | chr1.2:25866528-25866547 | MS.gene053334:intron | 40.0% |
! | TGTGCGTTGATACTAGTAGA+GGG | + | chr1.2:25869777-25869796 | MS.gene053334:CDS | 40.0% |
! | TTATTTCCGGTGCCAAGTTT+AGG | - | chr1.2:25869469-25869488 | None:intergenic | 40.0% |
! | TTTCAACACTCTAGCTCCAT+CGG | - | chr1.2:25867179-25867198 | None:intergenic | 40.0% |
!! | ATGTTTGGTTCCACTTTTGG+AGG | - | chr1.2:25866417-25866436 | None:intergenic | 40.0% |
!! | GGTGTTGATGTATCCCATAA+TGG | + | chr1.2:25867846-25867865 | MS.gene053334:CDS | 40.0% |
!! | TTTTTACATTAGCGGTGTCG+CGG | + | chr1.2:25869336-25869355 | MS.gene053334:intron | 40.0% |
!!! | AATTCCTTTTGGAGCTTGCA+CGG | + | chr1.2:25870777-25870796 | MS.gene053334:CDS | 40.0% |
!!! | AATTTTGGCTCCTCCAAAAG+TGG | + | chr1.2:25866404-25866423 | MS.gene053334:intron | 40.0% |
AAGATTTGGCTGCCTTGAAG+TGG | - | chr1.2:25870375-25870394 | None:intergenic | 45.0% | |
AATAGGTTTGATCAGCGACC+TGG | + | chr1.2:25869436-25869455 | MS.gene053334:intron | 45.0% | |
ACCATTGTCCCACATAAGCT+CGG | - | chr1.2:25869756-25869775 | None:intergenic | 45.0% | |
ACTCAGACTGAACTCACCAA+AGG | + | chr1.2:25870078-25870097 | MS.gene053334:intron | 45.0% | |
AGATTTGGCTGCCTTGAAGT+GGG | - | chr1.2:25870374-25870393 | None:intergenic | 45.0% | |
AGTGCAACCACACCACTATT+TGG | - | chr1.2:25870037-25870056 | None:intergenic | 45.0% | |
AGTTGGCAGTAGAGCAGTAT+AGG | + | chr1.2:25870416-25870435 | MS.gene053334:intron | 45.0% | |
AGTTTACATGGCTCCGTCTA+CGG | + | chr1.2:25870102-25870121 | MS.gene053334:intron | 45.0% | |
ATAAGCTCGGGGTAGTCATT+AGG | - | chr1.2:25869743-25869762 | None:intergenic | 45.0% | |
ATACAGAGAGAAACTGCCGA+TGG | + | chr1.2:25867160-25867179 | MS.gene053334:intron | 45.0% | |
ATACCTCGCCATCAAGTATC+GGG | - | chr1.2:25869576-25869595 | None:intergenic | 45.0% | |
CCATTAACGGGGAAATCAAG+GGG | + | chr1.2:25870237-25870256 | MS.gene053334:intron | 45.0% | |
CGCTATTAATCTCTCGTTGG+TGG | - | chr1.2:25866684-25866703 | None:intergenic | 45.0% | |
CGTAAATACCTGAAGGAGGA+TGG | - | chr1.2:25865092-25865111 | None:intergenic | 45.0% | |
CTAGTTTGGGTCAACCCAAA+TGG | + | chr1.2:25869668-25869687 | MS.gene053334:intron | 45.0% | |
CTTTAAGTAACTGCGGCACA+TGG | + | chr1.2:25867215-25867234 | MS.gene053334:intron | 45.0% | |
GAAGAGGTCTAATCCAGTGA+GGG | - | chr1.2:25869543-25869562 | None:intergenic | 45.0% | |
GATTATGCGGCTATGAAGCA+CGG | + | chr1.2:25868842-25868861 | MS.gene053334:intron | 45.0% | |
GCCGCAGTTACTTAAAGTTC+AGG | - | chr1.2:25867212-25867231 | None:intergenic | 45.0% | |
GGAGCCATGTAAACTACCTT+TGG | - | chr1.2:25870097-25870116 | None:intergenic | 45.0% | |
GGCTTATTCATCCCAGAATC+CGG | + | chr1.2:25866721-25866740 | MS.gene053334:CDS | 45.0% | |
GTCCGTGCTTCATAGTTATG+CGG | + | chr1.2:25869391-25869410 | MS.gene053334:intron | 45.0% | |
GTGAGTTCAGTCTGAGTATG+AGG | - | chr1.2:25870075-25870094 | None:intergenic | 45.0% | |
TAAGCTCGGGGTAGTCATTA+GGG | - | chr1.2:25869742-25869761 | None:intergenic | 45.0% | |
TACAGGCTTCCTGTCATGAA+GGG | + | chr1.2:25867784-25867803 | MS.gene053334:intron | 45.0% | |
TGCCAACTCATTGGTCCTTA+TGG | - | chr1.2:25870404-25870423 | None:intergenic | 45.0% | |
TGTGACTGTTGACGAGACAA+TGG | + | chr1.2:25867749-25867768 | MS.gene053334:intron | 45.0% | |
TGTTCGGATCCAGTATGAGA+GGG | + | chr1.2:25870891-25870910 | MS.gene053334:intron | 45.0% | |
TTACAGGCTTCCTGTCATGA+AGG | + | chr1.2:25867783-25867802 | MS.gene053334:intron | 45.0% | |
! | AAACGCTTTTCAGCTAGCTG+GGG | + | chr1.2:25869712-25869731 | MS.gene053334:intron | 45.0% |
! | AAGGATTTGAAGCCGGATTC+TGG | - | chr1.2:25866736-25866755 | None:intergenic | 45.0% |
! | ACATTCTAACCGGTTCCATC+AGG | - | chr1.2:25867107-25867126 | None:intergenic | 45.0% |
! | ACTGACTCCAAGAAAGTTGC+CGG | + | chr1.2:25870826-25870845 | MS.gene053334:CDS | 45.0% |
! | AGGATTTGAAGCCGGATTCT+GGG | - | chr1.2:25866735-25866754 | None:intergenic | 45.0% |
! | CTGGGTTTTCCATAGATGGA+TGG | + | chr1.2:25866527-25866546 | MS.gene053334:intron | 45.0% |
! | GGGTTTTCCATAGATGGATG+GGG | + | chr1.2:25866529-25866548 | MS.gene053334:intron | 45.0% |
! | GTAAACGCTTTTCAGCTAGC+TGG | + | chr1.2:25869710-25869729 | MS.gene053334:intron | 45.0% |
! | GTGCGTTGATACTAGTAGAG+GGG | + | chr1.2:25869778-25869797 | MS.gene053334:CDS | 45.0% |
! | TGTGCTGGGTTTTCCATAGA+TGG | + | chr1.2:25866523-25866542 | MS.gene053334:intron | 45.0% |
! | TTTTGTGGACCCTTCATGAC+AGG | - | chr1.2:25867796-25867815 | None:intergenic | 45.0% |
!! | ATGGAGTAAGCATTGGAACC+GGG | + | chr1.2:25867234-25867253 | MS.gene053334:intron | 45.0% |
!! | CATGGAGTAAGCATTGGAAC+CGG | + | chr1.2:25867233-25867252 | MS.gene053334:intron | 45.0% |
!! | GCTATCCTCTTTTTAGCCGT+TGG | + | chr1.2:25868158-25868177 | MS.gene053334:intron | 45.0% |
!! | TGGTGGATTTGAATTCAGCG+AGG | - | chr1.2:25865030-25865049 | None:intergenic | 45.0% |
!!! | ATTCCTTTTGGAGCTTGCAC+GGG | + | chr1.2:25870778-25870797 | MS.gene053334:CDS | 45.0% |
!!! | AATATTTTTTATTTTTATTG+AGG | + | chr1.2:25869613-25869632 | MS.gene053334:intron | 5.0% |
AACACTCATACGAGCCGTGT+CGG | + | chr1.2:25869000-25869019 | MS.gene053334:intron | 50.0% | |
ACACAGCCTAAACTTGGCAC+CGG | + | chr1.2:25869460-25869479 | MS.gene053334:CDS | 50.0% | |
ACGCAATCCCCATCCATCTA+TGG | - | chr1.2:25866539-25866558 | None:intergenic | 50.0% | |
AGAGTGTAATGGCGAGAGTG+AGG | - | chr1.2:25865055-25865074 | None:intergenic | 50.0% | |
AGCGTTTGCTCTGCTAGTTG+AGG | + | chr1.2:25866700-25866719 | MS.gene053334:CDS | 50.0% | |
ATGAAGCACGGACTCTGACA+CGG | - | chr1.2:25869384-25869403 | None:intergenic | 50.0% | |
ATGACTACCCCGAGCTTATG+TGG | + | chr1.2:25869744-25869763 | MS.gene053334:CDS | 50.0% | |
CACAATTTGGGGGAACGTCT+GGG | - | chr1.2:25868701-25868720 | None:intergenic | 50.0% | |
CATTGTCCCACATAAGCTCG+GGG | - | chr1.2:25869754-25869773 | None:intergenic | 50.0% | |
CCAAGTTTAGGCTGTGTTCC+AGG | - | chr1.2:25869457-25869476 | None:intergenic | 50.0% | |
CCATTGTCCCACATAAGCTC+GGG | - | chr1.2:25869755-25869774 | None:intergenic | 50.0% | |
CCCCTTGATTTCCCCGTTAA+TGG | - | chr1.2:25870240-25870259 | None:intergenic | 50.0% | |
CCTGGAACACAGCCTAAACT+TGG | + | chr1.2:25869454-25869473 | MS.gene053334:CDS | 50.0% | |
CGCCATAAGGACCAATGAGT+TGG | + | chr1.2:25870399-25870418 | MS.gene053334:intron | 50.0% | |
CTGCTCTACTGCCAACTCAT+TGG | - | chr1.2:25870413-25870432 | None:intergenic | 50.0% | |
GAGAACCTTCCTGATGGAAC+CGG | + | chr1.2:25867095-25867114 | MS.gene053334:intron | 50.0% | |
GATCTAGTGAAGGGAAGTCC+TGG | - | chr1.2:25868590-25868609 | None:intergenic | 50.0% | |
GGAAGAGGTCTAATCCAGTG+AGG | - | chr1.2:25869544-25869563 | None:intergenic | 50.0% | |
GGATTAGACCTCTTCCACCA+AGG | + | chr1.2:25869548-25869567 | MS.gene053334:CDS | 50.0% | |
GGCTCGTATGAGTGTTACAC+AGG | - | chr1.2:25868996-25869015 | None:intergenic | 50.0% | |
GTAATGGCGAGAGTGAGGAA+TGG | - | chr1.2:25865050-25865069 | None:intergenic | 50.0% | |
GTGTTCGGATCCAGTATGAG+AGG | + | chr1.2:25870890-25870909 | MS.gene053334:intron | 50.0% | |
TAGTAGAGGGGCTGCAGTAA+GGG | + | chr1.2:25869790-25869809 | MS.gene053334:CDS | 50.0% | |
TATGAAGCACGGACACCTCT+AGG | + | chr1.2:25868853-25868872 | MS.gene053334:intron | 50.0% | |
TCACAATTTGGGGGAACGTC+TGG | - | chr1.2:25868702-25868721 | None:intergenic | 50.0% | |
TCAGCGAGGATCTCATTGAG+AGG | - | chr1.2:25865016-25865035 | None:intergenic | 50.0% | |
TCTGTTTGAGGGAATGTGCG+TGG | + | chr1.2:25867278-25867297 | MS.gene053334:intron | 50.0% | |
TCTTGCACCTGTACAGCAAG+AGG | + | chr1.2:25869841-25869860 | MS.gene053334:CDS | 50.0% | |
TGACTACCCCGAGCTTATGT+GGG | + | chr1.2:25869745-25869764 | MS.gene053334:CDS | 50.0% | |
TGGAAGGATTGAACCCTCAC+TGG | + | chr1.2:25869527-25869546 | MS.gene053334:CDS | 50.0% | |
TTTGTCTGGGTTGTCCGACA+CGG | - | chr1.2:25869017-25869036 | None:intergenic | 50.0% | |
! | ACACGTACCGGCAACTTTCT+TGG | - | chr1.2:25870836-25870855 | None:intergenic | 50.0% |
! | GGCATCATGTGTTTTGCTGC+TGG | + | chr1.2:25868310-25868329 | MS.gene053334:intron | 50.0% |
! | TACGGGTGTCATAGGAGTGT+CGG | - | chr1.2:25868898-25868917 | None:intergenic | 50.0% |
! | TCTAACCGGTTCCATCAGGA+AGG | - | chr1.2:25867103-25867122 | None:intergenic | 50.0% |
AATGTGCGTGGATGCCTGGT+TGG | + | chr1.2:25867290-25867309 | MS.gene053334:intron | 55.0% | |
ATAAAGGTCGCCATGTGGGC+TGG | - | chr1.2:25866469-25866488 | None:intergenic | 55.0% | |
ATACCTGAAGGAGGATGGGG+AGG | - | chr1.2:25865087-25865106 | None:intergenic | 55.0% | |
ATGGCGAGAGTGAGGAATGG+TGG | - | chr1.2:25865047-25865066 | None:intergenic | 55.0% | |
ATGTGCGTGGATGCCTGGTT+GGG | + | chr1.2:25867291-25867310 | MS.gene053334:intron | 55.0% | |
CAGAGTATGGCCCTGTTCAG+TGG | + | chr1.2:25868733-25868752 | MS.gene053334:intron | 55.0% | |
CAGTTCGACACGTGTCGTAC+GGG | - | chr1.2:25868915-25868934 | None:intergenic | 55.0% | |
CCAAGGCTCCCGATACTTGA+TGG | + | chr1.2:25869565-25869584 | MS.gene053334:CDS | 55.0% | |
CCAGTTCGACACGTGTCGTA+CGG | - | chr1.2:25868916-25868935 | None:intergenic | 55.0% | |
CCCGAGCTTATGTGGGACAA+TGG | + | chr1.2:25869752-25869771 | MS.gene053334:CDS | 55.0% | |
CTAGTAGAGGGGCTGCAGTA+AGG | + | chr1.2:25869789-25869808 | MS.gene053334:CDS | 55.0% | |
GATCCCGTGCAAGCTCCAAA+AGG | - | chr1.2:25870784-25870803 | None:intergenic | 55.0% | |
GATGGATGGGGATTGCGTCT+TGG | + | chr1.2:25866541-25866560 | MS.gene053334:intron | 55.0% | |
GCGGCACATGGAGTAAGCAT+TGG | + | chr1.2:25867227-25867246 | MS.gene053334:intron | 55.0% | |
GTGTGGTATGGTGTACCCCT+GGG | - | chr1.2:25870129-25870148 | None:intergenic | 55.0% | |
TAAAGGTCGCCATGTGGGCT+GGG | - | chr1.2:25866468-25866487 | None:intergenic | 55.0% | |
TCTTGATGTCCCAGCCCACA+TGG | + | chr1.2:25866456-25866475 | MS.gene053334:intron | 55.0% | |
TGTGTGGTATGGTGTACCCC+TGG | - | chr1.2:25870130-25870149 | None:intergenic | 55.0% | |
TTACCTCCCCATCCTCCTTC+AGG | + | chr1.2:25865081-25865100 | MS.gene053334:CDS | 55.0% | |
! | ACGTGTCGTACGGGTGTCAT+AGG | - | chr1.2:25868906-25868925 | None:intergenic | 55.0% |
!! | CCATCAAGTATCGGGAGCCT+TGG | - | chr1.2:25869568-25869587 | None:intergenic | 55.0% |
!! | TCAAGTATCGGGAGCCTTGG+TGG | - | chr1.2:25869565-25869584 | None:intergenic | 55.0% |
ACGGACACCACGACACGACA+CGG | - | chr1.2:25869365-25869384 | None:intergenic | 60.0% | |
AGGGAATGTGCGTGGATGCC+TGG | + | chr1.2:25867286-25867305 | MS.gene053334:intron | 60.0% | |
ATCGGGAGCCTTGGTGGAAG+AGG | - | chr1.2:25869559-25869578 | None:intergenic | 60.0% | |
CCGTACGACACGTGTCGAAC+TGG | + | chr1.2:25868913-25868932 | MS.gene053334:intron | 60.0% | |
GGAGCTTGCACGGGATCCAA+AGG | + | chr1.2:25870787-25870806 | MS.gene053334:CDS | 60.0% | |
TGTACCCCTGGGTCCGTAGA+CGG | - | chr1.2:25870118-25870137 | None:intergenic | 60.0% | |
TTTGGGGGAACGTCTGGGTC+AGG | - | chr1.2:25868696-25868715 | None:intergenic | 60.0% | |
!! | AGGTGTCGGACACCGATCGT+AGG | - | chr1.2:25868976-25868995 | None:intergenic | 60.0% |
!! | CTCTAGGACTAGGCGTGTCG+CGG | + | chr1.2:25868869-25868888 | MS.gene053334:intron | 60.0% |
!! | GCACGGACACCTCTAGGACT+AGG | + | chr1.2:25868859-25868878 | MS.gene053334:intron | 60.0% |
!! | GCTCCCGATACTTGATGGCG+AGG | + | chr1.2:25869570-25869589 | MS.gene053334:CDS | 60.0% |
ATGGCTCCGTCTACGGACCC+AGG | + | chr1.2:25870109-25870128 | MS.gene053334:intron | 65.0% | |
CGCGACACGCCTAGTCCTAG+AGG | - | chr1.2:25868871-25868890 | None:intergenic | 65.0% | |
TGGCTCCGTCTACGGACCCA+GGG | + | chr1.2:25870110-25870129 | MS.gene053334:intron | 65.0% | |
GCGGTGTCCGTGTCGTGTCG+TGG | + | chr1.2:25869355-25869374 | MS.gene053334:intron | 70.0% | |
GGCTCCGTCTACGGACCCAG+GGG | + | chr1.2:25870111-25870130 | MS.gene053334:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 25864944 | 25871321 | 25864944 | ID=MS.gene053334 |
chr1.2 | mRNA | 25864944 | 25871321 | 25864944 | ID=MS.gene053334.t1;Parent=MS.gene053334 |
chr1.2 | exon | 25864944 | 25865102 | 25864944 | ID=MS.gene053334.t1.exon1;Parent=MS.gene053334.t1 |
chr1.2 | CDS | 25864944 | 25865102 | 25864944 | ID=cds.MS.gene053334.t1;Parent=MS.gene053334.t1 |
chr1.2 | exon | 25866665 | 25866775 | 25866665 | ID=MS.gene053334.t1.exon2;Parent=MS.gene053334.t1 |
chr1.2 | CDS | 25866665 | 25866775 | 25866665 | ID=cds.MS.gene053334.t1;Parent=MS.gene053334.t1 |
chr1.2 | exon | 25867789 | 25867875 | 25867789 | ID=MS.gene053334.t1.exon3;Parent=MS.gene053334.t1 |
chr1.2 | CDS | 25867789 | 25867875 | 25867789 | ID=cds.MS.gene053334.t1;Parent=MS.gene053334.t1 |
chr1.2 | exon | 25868425 | 25868478 | 25868425 | ID=MS.gene053334.t1.exon4;Parent=MS.gene053334.t1 |
chr1.2 | CDS | 25868425 | 25868478 | 25868425 | ID=cds.MS.gene053334.t1;Parent=MS.gene053334.t1 |
chr1.2 | exon | 25868591 | 25868736 | 25868591 | ID=MS.gene053334.t1.exon5;Parent=MS.gene053334.t1 |
chr1.2 | CDS | 25868591 | 25868736 | 25868591 | ID=cds.MS.gene053334.t1;Parent=MS.gene053334.t1 |
chr1.2 | exon | 25869441 | 25869591 | 25869441 | ID=MS.gene053334.t1.exon6;Parent=MS.gene053334.t1 |
chr1.2 | CDS | 25869441 | 25869591 | 25869441 | ID=cds.MS.gene053334.t1;Parent=MS.gene053334.t1 |
chr1.2 | exon | 25869725 | 25869862 | 25869725 | ID=MS.gene053334.t1.exon7;Parent=MS.gene053334.t1 |
chr1.2 | CDS | 25869725 | 25869862 | 25869725 | ID=cds.MS.gene053334.t1;Parent=MS.gene053334.t1 |
chr1.2 | exon | 25870776 | 25870847 | 25870776 | ID=MS.gene053334.t1.exon8;Parent=MS.gene053334.t1 |
chr1.2 | CDS | 25870776 | 25870847 | 25870776 | ID=cds.MS.gene053334.t1;Parent=MS.gene053334.t1 |
chr1.2 | exon | 25870986 | 25871059 | 25870986 | ID=MS.gene053334.t1.exon9;Parent=MS.gene053334.t1 |
chr1.2 | CDS | 25870986 | 25871059 | 25870986 | ID=cds.MS.gene053334.t1;Parent=MS.gene053334.t1 |
chr1.2 | exon | 25871150 | 25871321 | 25871150 | ID=MS.gene053334.t1.exon10;Parent=MS.gene053334.t1 |
chr1.2 | CDS | 25871150 | 25871321 | 25871150 | ID=cds.MS.gene053334.t1;Parent=MS.gene053334.t1 |
Gene Sequence |
Protein sequence |