AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene063357

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063357.t1 MTR_8g011350 85.465 172 8 2 46 200 211 382 1.98e-98 294
MS.gene063357.t1 MTR_8g011350 97.368 38 1 0 9 46 97 134 2.84e-17 80.1
MS.gene063357.t1 MTR_8g011350 85.465 172 8 2 46 200 211 382 2.59e-98 294
MS.gene063357.t1 MTR_8g011350 97.368 38 1 0 9 46 97 134 3.09e-17 79.7
MS.gene063357.t1 MTR_7g051430 54.545 165 57 1 46 192 210 374 5.16e-57 186
MS.gene063357.t1 MTR_7g051430 76.316 38 9 0 9 46 96 133 2.95e-12 65.1
MS.gene063357.t1 MTR_7g051430 54.545 165 57 1 46 192 210 374 4.46e-56 185
MS.gene063357.t1 MTR_7g051430 67.442 43 14 0 4 46 91 133 4.05e-12 65.1
MS.gene063357.t1 MTR_7g080180 52.353 170 54 5 46 190 210 377 7.94e-47 160
MS.gene063357.t1 MTR_7g080180 78.947 38 8 0 9 46 96 133 1.57e-13 68.9
MS.gene063357.t1 MTR_7g080180 52.353 170 54 5 46 190 210 377 1.21e-46 160
MS.gene063357.t1 MTR_7g080180 78.947 38 8 0 9 46 96 133 1.62e-13 68.9
MS.gene063357.t1 MTR_4g021535 31.963 219 97 9 9 194 103 302 5.67e-20 87.4
MS.gene063357.t1 MTR_2g018590 32.000 150 79 5 46 189 214 346 2.70e-14 71.2
MS.gene063357.t1 MTR_4g021520 32.886 149 81 5 46 192 220 351 3.30e-14 70.9
MS.gene063357.t1 MTR_2g018630 31.126 151 82 6 46 194 112 242 3.31e-14 70.9
MS.gene063357.t1 MTR_4g021520 32.886 149 81 5 46 192 220 351 3.45e-14 70.9
MS.gene063357.t1 MTR_0024s0320 85.714 35 5 0 46 80 39 73 6.52e-14 67.0
MS.gene063357.t1 MTR_2g018630 31.126 151 82 6 46 194 217 347 6.63e-14 70.1
MS.gene063357.t1 MTR_4g021500 32.026 153 81 6 46 194 220 353 4.24e-12 65.1
MS.gene063357.t1 MTR_4g021500 32.026 153 81 6 46 194 220 353 4.51e-12 65.1
MS.gene063357.t1 MTR_2g018600 38.158 76 44 2 46 119 214 288 3.54e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063357.t1 AT4G12910 53.293 167 61 2 46 196 215 380 6.52e-54 179
MS.gene063357.t1 AT4G12910 73.684 38 10 0 9 46 101 138 2.46e-11 62.8
MS.gene063357.t1 AT4G12910 53.293 167 61 2 46 196 215 380 1.24e-53 179
MS.gene063357.t1 AT4G12910 73.684 38 10 0 9 46 101 138 2.63e-11 62.8
MS.gene063357.t1 AT3G25420 52.381 168 57 4 46 192 208 373 2.36e-49 167
MS.gene063357.t1 AT2G22920 44.737 76 40 1 46 119 26 101 1.30e-14 70.9
MS.gene063357.t1 AT5G09640 48.649 74 36 1 46 117 207 280 2.42e-14 71.6
MS.gene063357.t1 AT2G22920 41.379 87 49 1 46 130 205 291 3.14e-14 71.2
MS.gene063357.t1 AT2G22920 41.379 87 49 1 46 130 205 291 3.38e-14 70.5
MS.gene063357.t1 AT2G22920 41.379 87 49 1 46 130 205 291 4.71e-14 70.5
MS.gene063357.t1 AT2G22980 42.105 76 42 1 46 119 84 159 1.00e-12 66.2
MS.gene063357.t1 AT1G73270 39.080 87 51 1 46 130 213 299 1.18e-12 66.6
MS.gene063357.t1 AT1G73270 39.080 87 51 1 46 130 213 299 1.24e-12 66.6
MS.gene063357.t1 AT2G22980 42.105 76 42 1 46 119 201 276 1.33e-12 66.2
MS.gene063357.t1 AT2G22980 42.105 76 42 1 46 119 201 276 1.60e-12 66.2
MS.gene063357.t1 AT2G22980 42.105 76 42 1 46 119 201 276 1.72e-12 65.9
MS.gene063357.t1 AT2G22980 42.105 76 42 1 46 119 203 278 1.81e-12 65.9
MS.gene063357.t1 AT2G22970 42.105 76 41 2 46 119 205 279 1.59e-11 63.2
MS.gene063357.t1 AT2G22970 42.105 76 41 2 46 119 205 279 1.65e-11 63.2
MS.gene063357.t1 AT2G22970 42.105 76 41 2 46 119 205 279 1.80e-11 63.2
MS.gene063357.t1 AT2G22970 42.105 76 41 2 46 119 205 279 2.55e-11 62.4
MS.gene063357.t1 AT1G73280 27.815 151 68 3 46 194 111 222 2.82e-11 62.4
MS.gene063357.t1 AT1G73280 27.815 151 68 3 46 194 86 197 3.31e-11 62.0
MS.gene063357.t1 AT1G73280 27.815 151 68 3 46 194 213 324 4.24e-11 62.0
MS.gene063357.t1 AT2G22990 38.158 76 45 1 46 119 88 163 4.73e-11 61.6
MS.gene063357.t1 AT1G73280 27.815 151 68 3 46 194 213 324 5.11e-11 61.6
MS.gene063357.t1 AT2G22990 38.158 76 45 1 46 119 88 163 5.57e-11 61.2
MS.gene063357.t1 AT1G73290 35.135 74 48 0 46 119 212 285 5.59e-11 61.2
MS.gene063357.t1 AT2G23000 29.139 151 71 3 46 194 204 320 7.28e-11 61.2
MS.gene063357.t1 AT2G23000 29.139 151 71 3 46 194 204 320 7.28e-11 61.2
MS.gene063357.t1 AT1G73290 35.135 74 48 0 46 119 212 285 7.29e-11 61.2
MS.gene063357.t1 AT2G22990 38.158 76 45 1 46 119 193 268 9.00e-11 60.8

Find 50 sgRNAs with CRISPR-Local

Find 118 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAAGATTATCTCCTATATT+AGG 0.270969 2.4:+26273859 MS.gene063357:CDS
CATACCTTGGTCCAGCTATA+TGG 0.285880 2.4:-26272986 None:intergenic
CATCTCTCACAGGTGCTCTA+AGG 0.317256 2.4:-26273962 None:intergenic
TCTCTTGTTTCTAAATTTGT+TGG 0.322215 2.4:-26274877 None:intergenic
CCGTCTAGTTTCCGTGAGTT+AGG 0.343796 2.4:+26273885 MS.gene063357:CDS
TGGCAATTGATGATTTCTTC+AGG 0.362023 2.4:+26272905 MS.gene063357:CDS
TATCTCAGATGAATTGTTTG+AGG 0.408758 2.4:+26273504 MS.gene063357:CDS
AGAGTCTAAATATATAATAC+TGG 0.418253 2.4:-26273395 None:intergenic
ATCTCTCACAGGTGCTCTAA+GGG 0.423846 2.4:-26273961 None:intergenic
TGTTCCATTTGTACATGGGA+TGG 0.425923 2.4:+26273477 MS.gene063357:CDS
ACTAGACGGTAACCTAATAT+AGG 0.445194 2.4:-26273871 None:intergenic
GCTCTTGTTCCATTTGTACA+TGG 0.446060 2.4:+26273472 MS.gene063357:CDS
GTTCCATTTGTACATGGGAT+GGG 0.456629 2.4:+26273478 MS.gene063357:CDS
TCTCCTGCTGGTTACATAGT+TGG 0.465774 2.4:+26273415 MS.gene063357:CDS
CAGCAAAGACAAAGGGAAGC+CGG 0.470115 2.4:+26272945 MS.gene063357:CDS
AGACCCATCCCATGTACAAA+TGG 0.478452 2.4:-26273481 None:intergenic
GGTTGAACAATGAAGAAGTC+AGG 0.487179 2.4:+26274227 MS.gene063357:CDS
GCCTCTGTGCCGTGGTAGCA+TGG 0.493000 2.4:-26273834 None:intergenic
AAAGAATGTTCGGTCGCGCT+TGG 0.494036 2.4:+26273937 MS.gene063357:CDS
TTTGCTGCTTCAAAATTGAA+AGG 0.501124 2.4:-26272929 None:intergenic
GATTGAGGTGCAGAGTTGGC+CGG 0.510711 2.4:-26272964 None:intergenic
TTTGAAGCAGCAAAGACAAA+GGG 0.512920 2.4:+26272938 MS.gene063357:CDS
TGCACCTCAATCCATATAGC+TGG 0.517012 2.4:+26272975 MS.gene063357:CDS
AGGTTAACCGCGAGTGTGAT+GGG 0.518035 2.4:+26273639 MS.gene063357:CDS
GCTGGTTACATAGTTGGAAA+TGG 0.524879 2.4:+26273421 MS.gene063357:CDS
GTTACAGATGAACAAATTGA+TGG 0.533753 2.4:+26273445 MS.gene063357:CDS
GAGGTTAACCGCGAGTGTGA+TGG 0.533915 2.4:+26273638 MS.gene063357:CDS
CCTGTGAGGAAAAGAATGTT+CGG 0.536839 2.4:+26273927 MS.gene063357:CDS
ATATATTTAGACTCTCCTGC+TGG 0.546816 2.4:+26273403 MS.gene063357:CDS
AAGAGATGGTAGACATTCAT+CGG 0.557042 2.4:+26274894 MS.gene063357:CDS
CTCTTGTTCCATTTGTACAT+GGG 0.559485 2.4:+26273473 MS.gene063357:CDS
TTTCAGTCTCACCTAACTCA+CGG 0.568224 2.4:-26273896 None:intergenic
TGGTCCAGCTATATGGATTG+AGG 0.571480 2.4:-26272979 None:intergenic
CTTAGAGCACCTGTGAGAGA+TGG 0.577548 2.4:+26273963 MS.gene063357:CDS
GGTACGTTGCCATCTCTCAC+AGG 0.581740 2.4:-26273972 None:intergenic
TATGGATTGAGGTGCAGAGT+TGG 0.582471 2.4:-26272968 None:intergenic
TCTTATCTGCCTCTGTGCCG+TGG 0.592423 2.4:-26273842 None:intergenic
TTTCCAACTATGTAACCAGC+AGG 0.601514 2.4:-26273418 None:intergenic
ATGGCTCTGTTGCAAATGCA+TGG 0.623040 2.4:+26274206 MS.gene063357:CDS
ACAAATTTAGAAACAAGAGA+TGG 0.638643 2.4:+26274880 MS.gene063357:CDS
CCTAACTCACGGAAACTAGA+CGG 0.643978 2.4:-26273885 None:intergenic
AGAAATTCCCATCACACTCG+CGG 0.644090 2.4:-26273646 None:intergenic
ATTCTAGAACCATGCTACCA+CGG 0.649207 2.4:+26273825 MS.gene063357:CDS
GGAGTCTAGCTACCGCCTCG+AGG 0.654902 2.4:+26274915 MS.gene063357:CDS
GAAAGCAATTCACACTGCAG+AGG 0.668971 2.4:+26274249 MS.gene063357:CDS
TCTCTCACAGGTGCTCTAAG+GGG 0.683162 2.4:-26273960 None:intergenic
TGCTTCAATGATCCTCGAGG+CGG 0.695198 2.4:-26274927 None:intergenic
CAATCCATATAGCTGGACCA+AGG 0.709270 2.4:+26272982 MS.gene063357:CDS
TGTTGCTTCAATGATCCTCG+AGG 0.725983 2.4:-26274930 None:intergenic
ACCATGCTACCACGGCACAG+AGG 0.736692 2.4:+26273833 MS.gene063357:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAATTAGCATTTCTA+AGG - chr2.4:26274147-26274166 None:intergenic 15.0%
!! ATATAAATCGTAAAATAACA+TGG - chr2.4:26274715-26274734 None:intergenic 15.0%
!! TTATAAGAAATAAGTGAATT+TGG + chr2.4:26273747-26273766 MS.gene063357:intron 15.0%
!!! TATTTCTATAACATAAGATA+AGG - chr2.4:26273224-26273243 None:intergenic 15.0%
!!! TATTTTTTCTTGTTATCAAA+TGG + chr2.4:26273342-26273361 MS.gene063357:intron 15.0%
!!! TTGATGATTCTTATTATTTT+AGG + chr2.4:26273776-26273795 MS.gene063357:intron 15.0%
!!! TTTTTAAAAAATTCATACCT+TGG - chr2.4:26273002-26273021 None:intergenic 15.0%
!! AGAGTCTAAATATATAATAC+TGG - chr2.4:26273398-26273417 None:intergenic 20.0%
!! ATAAGATTATCTCCTATATT+AGG + chr2.4:26273859-26273878 MS.gene063357:CDS 20.0%
!! TATAAAATACCAATCATGAT+GGG + chr2.4:26274405-26274424 MS.gene063357:intron 20.0%
!! TTATACTAAATATACATCGA+AGG - chr2.4:26274390-26274409 None:intergenic 20.0%
!!! AAAATCAGTTGAATTTTGAA+AGG + chr2.4:26273018-26273037 MS.gene063357:intron 20.0%
!!! AAATCAGTTGAATTTTGAAA+GGG + chr2.4:26273019-26273038 MS.gene063357:intron 20.0%
!!! AATAGATTTTCTTTTAGACA+AGG - chr2.4:26274669-26274688 None:intergenic 20.0%
!!! TATTATTTTAGGACATTGAT+GGG + chr2.4:26273787-26273806 MS.gene063357:intron 20.0%
!!! TTATTATTTTAGGACATTGA+TGG + chr2.4:26273786-26273805 MS.gene063357:intron 20.0%
! AAATCAACTAGTAGCTAATA+AGG - chr2.4:26274091-26274110 None:intergenic 25.0%
! ACAAATTTAGAAACAAGAGA+TGG + chr2.4:26274880-26274899 MS.gene063357:CDS 25.0%
! GCTAATAAGGAGATATTAAA+TGG - chr2.4:26274078-26274097 None:intergenic 25.0%
! GTATAAAATACCAATCATGA+TGG + chr2.4:26274404-26274423 MS.gene063357:intron 25.0%
! TTACAAGACAATATATAGCA+AGG - chr2.4:26273582-26273601 None:intergenic 25.0%
!! TGCTATATAGCATTTTTCTT+TGG + chr2.4:26274748-26274767 MS.gene063357:intron 25.0%
!! TTTTGACATTCAAAGTATAG+AGG - chr2.4:26274294-26274313 None:intergenic 25.0%
!!! TCTCTTGTTTCTAAATTTGT+TGG - chr2.4:26274880-26274899 None:intergenic 25.0%
ACACAATATTGAAACTGAAG+AGG - chr2.4:26274810-26274829 None:intergenic 30.0%
ATTTATTTAGCCCTTCCTAT+AGG + chr2.4:26274520-26274539 MS.gene063357:intron 30.0%
CACAATATTGAAACTGAAGA+GGG - chr2.4:26274809-26274828 None:intergenic 30.0%
CATAAACGTCTATCATGTAA+GGG - chr2.4:26273260-26273279 None:intergenic 30.0%
CATGACCTAACAATATCTTT+AGG + chr2.4:26274183-26274202 MS.gene063357:intron 30.0%
GATGATTTCTTCTCATAGTT+TGG + chr2.4:26273045-26273064 MS.gene063357:intron 30.0%
GCTTTATGATTTAGCAGAAT+TGG - chr2.4:26274546-26274565 None:intergenic 30.0%
GGCTAAATAAATCAAACAAG+AGG - chr2.4:26274512-26274531 None:intergenic 30.0%
GTAAAGAAACATATTGTGCA+TGG - chr2.4:26274032-26274051 None:intergenic 30.0%
GTTACAGATGAACAAATTGA+TGG + chr2.4:26273445-26273464 MS.gene063357:CDS 30.0%
TATCTCAGATGAATTGTTTG+AGG + chr2.4:26273504-26273523 MS.gene063357:CDS 30.0%
TGAATTACACAACTCTTGTT+TGG - chr2.4:26273310-26273329 None:intergenic 30.0%
TGCACAATAACTATCTTTGA+AGG - chr2.4:26274486-26274505 None:intergenic 30.0%
! AAAGCATTAAAAGCCAAAGT+TGG + chr2.4:26274561-26274580 MS.gene063357:intron 30.0%
! ACCTAACAATATCTTTAGGA+TGG + chr2.4:26274187-26274206 MS.gene063357:intron 30.0%
! TGATTCTGATTTTGCATTAC+AGG + chr2.4:26273369-26273388 MS.gene063357:intron 30.0%
! TTCCAAACTTGCTCTTAAAA+GGG - chr2.4:26273540-26273559 None:intergenic 30.0%
! TTGTTGCTATTGATAAGTTG+TGG - chr2.4:26274005-26274024 None:intergenic 30.0%
! TTTGCTGCTTCAAAATTGAA+AGG - chr2.4:26272932-26272951 None:intergenic 30.0%
!! TTCTTCTCATAGTTTGGTTT+TGG + chr2.4:26273051-26273070 MS.gene063357:intron 30.0%
!!! TCTTCTCATAGTTTGGTTTT+GGG + chr2.4:26273052-26273071 MS.gene063357:intron 30.0%
AAGAGATGGTAGACATTCAT+CGG + chr2.4:26274894-26274913 MS.gene063357:CDS 35.0%
ACTAGACGGTAACCTAATAT+AGG - chr2.4:26273874-26273893 None:intergenic 35.0%
ACTTTGCCTTTCAACCAATT+TGG - chr2.4:26274616-26274635 None:intergenic 35.0%
ATATATTTAGACTCTCCTGC+TGG + chr2.4:26273403-26273422 MS.gene063357:CDS 35.0%
CAAGCTTGCAAAAATTGATG+AGG + chr2.4:26273697-26273716 MS.gene063357:CDS 35.0%
CTCTTGTTCCATTTGTACAT+GGG + chr2.4:26273473-26273492 MS.gene063357:CDS 35.0%
GCATAAACGTCTATCATGTA+AGG - chr2.4:26273261-26273280 None:intergenic 35.0%
GCCATCCTAAAGATATTGTT+AGG - chr2.4:26274191-26274210 None:intergenic 35.0%
TATCACTTCATCACCAACTT+TGG - chr2.4:26274577-26274596 None:intergenic 35.0%
TCTGATGAAACAGAAAAGTG+TGG + chr2.4:26274331-26274350 MS.gene063357:intron 35.0%
TTGAAAGGCAAAGTAAAGGT+AGG + chr2.4:26274622-26274641 MS.gene063357:intron 35.0%
TTGGTTGAAAGGCAAAGTAA+AGG + chr2.4:26274618-26274637 MS.gene063357:intron 35.0%
! ATTTAGCAGAATTGGCCTAT+AGG - chr2.4:26274538-26274557 None:intergenic 35.0%
! GTTCCAAACTTGCTCTTAAA+AGG - chr2.4:26273541-26273560 None:intergenic 35.0%
! TGGCAATTGATGATTTCTTC+AGG + chr2.4:26272905-26272924 MS.gene063357:CDS 35.0%
! TTTGAAGCAGCAAAGACAAA+GGG + chr2.4:26272938-26272957 MS.gene063357:CDS 35.0%
!! CAGTTGAATTTTGAAAGGGA+AGG + chr2.4:26273023-26273042 MS.gene063357:intron 35.0%
!! TACCCTTTTAAGAGCAAGTT+TGG + chr2.4:26273535-26273554 MS.gene063357:intron 35.0%
!! TTTTGGGTAGAGACTCTATA+GGG + chr2.4:26273068-26273087 MS.gene063357:intron 35.0%
!!! TTTTGAAGCAGCAAAGACAA+AGG + chr2.4:26272937-26272956 MS.gene063357:CDS 35.0%
CCTGTGAGGAAAAGAATGTT+CGG + chr2.4:26273927-26273946 MS.gene063357:CDS 40.0%
GACATCATTCCCATCATGAT+TGG - chr2.4:26274417-26274436 None:intergenic 40.0%
GCTCTTGTTCCATTTGTACA+TGG + chr2.4:26273472-26273491 MS.gene063357:CDS 40.0%
GCTGGTTACATAGTTGGAAA+TGG + chr2.4:26273421-26273440 MS.gene063357:CDS 40.0%
GGTTGAACAATGAAGAAGTC+AGG + chr2.4:26274227-26274246 MS.gene063357:CDS 40.0%
GTTCCATTTGTACATGGGAT+GGG + chr2.4:26273478-26273497 MS.gene063357:CDS 40.0%
TGTTCCATTTGTACATGGGA+TGG + chr2.4:26273477-26273496 MS.gene063357:CDS 40.0%
TTGAGGCCAAATTGGTTGAA+AGG + chr2.4:26274607-26274626 MS.gene063357:intron 40.0%
TTGATAAGTTGTGGCCAAGT+TGG - chr2.4:26273996-26274015 None:intergenic 40.0%
TTTCAGTCTCACCTAACTCA+CGG - chr2.4:26273899-26273918 None:intergenic 40.0%
TTTCCAACTATGTAACCAGC+AGG - chr2.4:26273421-26273440 None:intergenic 40.0%
! AGAAAAGTGTGGTCAGTAGT+TGG + chr2.4:26274342-26274361 MS.gene063357:intron 40.0%
! AGTGATAGTGAAGTCACTTG+AGG + chr2.4:26274590-26274609 MS.gene063357:intron 40.0%
! ATTCTTTTCCTCACAGGATG+AGG - chr2.4:26273924-26273943 None:intergenic 40.0%
! GAAAAGTGTGGTCAGTAGTT+GGG + chr2.4:26274343-26274362 MS.gene063357:intron 40.0%
!! ATTCTAGAACCATGCTACCA+CGG + chr2.4:26273825-26273844 MS.gene063357:CDS 40.0%
!! GTTTTGGGTAGAGACTCTAT+AGG + chr2.4:26273067-26273086 MS.gene063357:intron 40.0%
AAGCTCTCAAACAGTCTCAC+AGG - chr2.4:26273134-26273153 None:intergenic 45.0%
AGAAATTCCCATCACACTCG+CGG - chr2.4:26273649-26273668 None:intergenic 45.0%
AGACCCATCCCATGTACAAA+TGG - chr2.4:26273484-26273503 None:intergenic 45.0%
ATCTCTCACAGGTGCTCTAA+GGG - chr2.4:26273964-26273983 None:intergenic 45.0%
CAATCCATATAGCTGGACCA+AGG + chr2.4:26272982-26273001 MS.gene063357:CDS 45.0%
CATACCTTGGTCCAGCTATA+TGG - chr2.4:26272989-26273008 None:intergenic 45.0%
CCTAACTCACGGAAACTAGA+CGG - chr2.4:26273888-26273907 None:intergenic 45.0%
CTGAAAAACCTCATCCTGTG+AGG + chr2.4:26273913-26273932 MS.gene063357:CDS 45.0%
GAAAGCAATTCACACTGCAG+AGG + chr2.4:26274249-26274268 MS.gene063357:CDS 45.0%
GAAGTCACTTGAGGCCAAAT+TGG + chr2.4:26274599-26274618 MS.gene063357:intron 45.0%
TGCACCTCAATCCATATAGC+TGG + chr2.4:26272975-26272994 MS.gene063357:CDS 45.0%
! AGCAGAATTGGCCTATAGGA+AGG - chr2.4:26274534-26274553 None:intergenic 45.0%
! ATGGCTCTGTTGCAAATGCA+TGG + chr2.4:26274206-26274225 MS.gene063357:CDS 45.0%
! CCGAACATTCTTTTCCTCAC+AGG - chr2.4:26273930-26273949 None:intergenic 45.0%
! GCAGAATTGGCCTATAGGAA+GGG - chr2.4:26274533-26274552 None:intergenic 45.0%
! TATGGATTGAGGTGCAGAGT+TGG - chr2.4:26272971-26272990 None:intergenic 45.0%
! TCTCCTGCTGGTTACATAGT+TGG + chr2.4:26273415-26273434 MS.gene063357:CDS 45.0%
! TGGTCCAGCTATATGGATTG+AGG - chr2.4:26272982-26273001 None:intergenic 45.0%
AAAGAATGTTCGGTCGCGCT+TGG + chr2.4:26273937-26273956 MS.gene063357:CDS 50.0%
AGGTTAACCGCGAGTGTGAT+GGG + chr2.4:26273639-26273658 MS.gene063357:CDS 50.0%
ATGTTGCACTCTGTTGCAGG+AGG + chr2.4:26273619-26273638 MS.gene063357:intron 50.0%
CAATTCACACTGCAGAGGTG+AGG + chr2.4:26274254-26274273 MS.gene063357:intron 50.0%
CAGCAAAGACAAAGGGAAGC+CGG + chr2.4:26272945-26272964 MS.gene063357:CDS 50.0%
CATCTCTCACAGGTGCTCTA+AGG - chr2.4:26273965-26273984 None:intergenic 50.0%
GAGATGGCAACGTACCAACT+TGG + chr2.4:26273979-26273998 MS.gene063357:intron 50.0%
GTCATGTTGCACTCTGTTGC+AGG + chr2.4:26273616-26273635 MS.gene063357:intron 50.0%
! CCGTCTAGTTTCCGTGAGTT+AGG + chr2.4:26273885-26273904 MS.gene063357:CDS 50.0%
! CTTAGAGCACCTGTGAGAGA+TGG + chr2.4:26273963-26273982 MS.gene063357:CDS 50.0%
! TCTCTCACAGGTGCTCTAAG+GGG - chr2.4:26273963-26273982 None:intergenic 50.0%
GAGGTTAACCGCGAGTGTGA+TGG + chr2.4:26273638-26273657 MS.gene063357:CDS 55.0%
GATTGAGGTGCAGAGTTGGC+CGG - chr2.4:26272967-26272986 None:intergenic 55.0%
GGTACGTTGCCATCTCTCAC+AGG - chr2.4:26273975-26273994 None:intergenic 55.0%
TCTTATCTGCCTCTGTGCCG+TGG - chr2.4:26273845-26273864 None:intergenic 55.0%
ACCATGCTACCACGGCACAG+AGG + chr2.4:26273833-26273852 MS.gene063357:CDS 60.0%
GCCTCTGTGCCGTGGTAGCA+TGG - chr2.4:26273837-26273856 None:intergenic 65.0%
GGAGTCTAGCTACCGCCTCG+AGG + chr2.4:26274915-26274934 MS.gene063357:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 26272902 26274945 26272902 ID=MS.gene063357
chr2.4 mRNA 26272902 26274945 26272902 ID=MS.gene063357.t1;Parent=MS.gene063357
chr2.4 exon 26272902 26273003 26272902 ID=MS.gene063357.t1.exon1;Parent=MS.gene063357.t1
chr2.4 CDS 26272902 26273003 26272902 ID=cds.MS.gene063357.t1;Parent=MS.gene063357.t1
chr2.4 exon 26273391 26273525 26273391 ID=MS.gene063357.t1.exon2;Parent=MS.gene063357.t1
chr2.4 CDS 26273391 26273525 26273391 ID=cds.MS.gene063357.t1;Parent=MS.gene063357.t1
chr2.4 exon 26273638 26273718 26273638 ID=MS.gene063357.t1.exon3;Parent=MS.gene063357.t1
chr2.4 CDS 26273638 26273718 26273638 ID=cds.MS.gene063357.t1;Parent=MS.gene063357.t1
chr2.4 exon 26273798 26273989 26273798 ID=MS.gene063357.t1.exon4;Parent=MS.gene063357.t1
chr2.4 CDS 26273798 26273989 26273798 ID=cds.MS.gene063357.t1;Parent=MS.gene063357.t1
chr2.4 exon 26274205 26274270 26274205 ID=MS.gene063357.t1.exon5;Parent=MS.gene063357.t1
chr2.4 CDS 26274205 26274270 26274205 ID=cds.MS.gene063357.t1;Parent=MS.gene063357.t1
chr2.4 exon 26274877 26274945 26274877 ID=MS.gene063357.t1.exon6;Parent=MS.gene063357.t1
chr2.4 CDS 26274877 26274945 26274877 ID=cds.MS.gene063357.t1;Parent=MS.gene063357.t1
Gene Sequence

>MS.gene063357

ATGTGGCAATTGATGATTTCTTCAGGTCCTTTCAATTTTGAAGCAGCAAAGACAAAGGGAAGCCGGCCAACTCTGCACCTCAATCCATATAGCTGGACCAAGGTATGAATTTTTTAAAAATCAGTTGAATTTTGAAAGGGAAGGATGATTTCTTCTCATAGTTTGGTTTTGGGTAGAGACTCTATAGGGTTGTTTGTATTGACTTATTTAAATTTATGTATAATAAGCACCTGTGAGACTGTTTGAGAGCTTTTGAAAAGAATGAGCTCTTCATGATAGCTTATGAATGCAGCTTGTAACTTATATGTAAACTGTTTGACCTTATCTTATGTTATAGAAATAACTTATATGTAAGCCCTTACATGATAGACGTTTATGCTATAAGTAAGTAGTTAAGTTGTTTATCCAAACAAGAGTTGTGTAATTCAACAATCACTAGTTATTTTTTCTTGTTATCAAATGGTATATGATTCTGATTTTGCATTACAGGTTTCCAGTATTATATATTTAGACTCTCCTGCTGGTTACATAGTTGGAAATGGTGTTACAGATGAACAAATTGATGGCAATGCTCTTGTTCCATTTGTACATGGGATGGGTCTTATCTCAGATGAATTGTTTGAGGTGAAAATATACCCTTTTAAGAGCAAGTTTGGAACTATATCTATTGTTTGAAACCTTGCTATATATTGTCTTGTAAGTATGTTTCTTTAAGTCATGTTGCACTCTGTTGCAGGAGGTTAACCGCGAGTGTGATGGGAATTTCTATAATTCACTCAGTGATAATTGTACAAACAAGCTTGCAAAAATTGATGAGGTGATTTAATTATACTACAGTACTGAGATTATAAGAAATAAGTGAATTTGGCACTCATTGATGATTCTTATTATTTTAGGACATTGATGGGTTGAATGTATATAACATTCTAGAACCATGCTACCACGGCACAGAGGCAGATAAGATTATCTCCTATATTAGGTTACCGTCTAGTTTCCGTGAGTTAGGTGAGACTGAAAAACCTCATCCTGTGAGGAAAAGAATGTTCGGTCGCGCTTGGCCCCTTAGAGCACCTGTGAGAGATGGCAACGTACCAACTTGGCCACAACTTATCAATAGCAACAATGTTCCATGCACAATATGTTTCTTTACTACTATCTAAGTGTCTATATTTACCATTTAATATCTCCTTATTAGCTACTAGTTGATTTAATTGCTCGATTATCATTGCATACTTGTTTAAACCTTAGAAATGCTAATTTTTTATTGCAAAAAACAAGTAACATGACCTAACAATATCTTTAGGATGGCTCTGTTGCAAATGCATGGTTGAACAATGAAGAAGTCAGGAAAGCAATTCACACTGCAGAGGTGAGGTTTCTTGTAAGATACCTCTATACTTTGAATGTCAAAACACTAAATTATTATCTCTCTGATGAAACAGAAAAGTGTGGTCAGTAGTTGGGATTTATGCACAGACAAAATTTCCTTCGATGTATATTTAGTATAAAATACCAATCATGATGGGAATGATGTCTTAGAGAGATATGAGATGTTTGACTATGATTTGTGTGCTTTTTCTTCCTTCAAAGATAGTTATTGTGCAAAACCTCTTGTTTGATTTATTTAGCCCTTCCTATAGGCCAATTCTGCTAAATCATAAAGCATTAAAAGCCAAAGTTGGTGATGAAGTGATAGTGAAGTCACTTGAGGCCAAATTGGTTGAAAGGCAAAGTAAAGGTAGGTTCTTGTGCAATATTATTATACCTTGTCTAAAAGAAAATCTATTTTCTGACTGAAGTAGAACACATGCCATGTTATTTTACGATTTATATGAAAAATCTTCAATGCTATATAGCATTTTTCTTTGGACATGTATATTAGATTGTATATGTATGTTTGTTTTCCCTCTTCAGTTTCAATATTGTGTTTCAATTTACTAATCATTGTCTTATTTATTTTTCTTCTTCTTTTCAGCCAACAAATTTAGAAACAAGAGATGGTAGACATTCATCGGAGTCTAGCTACCGCCTCGAGGATCATTGA
Protein sequence

>MS.gene063357.t1

MWQLMISSGPFNFEAAKTKGSRPTLHLNPYSWTKVSSIIYLDSPAGYIVGNGVTDEQIDGNALVPFVHGMGLISDELFEEVNRECDGNFYNSLSDNCTNKLAKIDEDIDGLNVYNILEPCYHGTEADKIISYIRLPSSFRELGETEKPHPVRKRMFGRAWPLRAPVRDGNDGSVANAWLNNEEVRKAIHTAEPTNLETRDGRHSSESSYRLEDH