Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063469.t1 | XP_003627964.1 | 94 | 433 | 26 | 0 | 1 | 433 | 1 | 433 | 6.40E-226 | 793.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063469.t1 | Q500W7 | 65.7 | 434 | 144 | 2 | 3 | 431 | 15 | 448 | 3.9e-163 | 575.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063469.t1 | G7LHL5 | 94.0 | 433 | 26 | 0 | 1 | 433 | 1 | 433 | 4.6e-226 | 793.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052242 | MS.gene063469 | 0.805525 | 1.28E-49 | -1.69E-46 |
| MS.gene057451 | MS.gene063469 | 0.804705 | 1.90E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063469.t1 | MTR_8g040610 | 96.536 | 433 | 15 | 0 | 1 | 433 | 1 | 433 | 0.0 | 850 |
| MS.gene063469.t1 | MTR_1g058230 | 91.429 | 420 | 25 | 2 | 20 | 429 | 4 | 422 | 0.0 | 767 |
| MS.gene063469.t1 | MTR_8g040610 | 96.454 | 282 | 10 | 0 | 152 | 433 | 24 | 305 | 0.0 | 526 |
| MS.gene063469.t1 | MTR_6g051670 | 72.727 | 44 | 12 | 0 | 100 | 143 | 36 | 79 | 1.43e-17 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063469.t1 | AT5G22130 | 70.183 | 436 | 125 | 2 | 3 | 433 | 15 | 450 | 0.0 | 630 |
| MS.gene063469.t1 | AT5G22130 | 70.115 | 435 | 125 | 2 | 4 | 433 | 1 | 435 | 0.0 | 626 |
| MS.gene063469.t1 | AT5G22130 | 67.105 | 456 | 125 | 3 | 3 | 433 | 15 | 470 | 0.0 | 617 |
Find 95 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGACTTGTTGTCCATTTC+AGG | 0.156966 | 8.4:-18284519 | MS.gene063469:CDS |
| TATCATATATATCTTCATTA+TGG | 0.159025 | 8.4:-18284175 | MS.gene063469:CDS |
| GGAGTAAAATGAAGCTTAAA+TGG | 0.218015 | 8.4:-18283476 | MS.gene063469:CDS |
| GCGGCTTCTCTTGTTGCTTC+TGG | 0.249848 | 8.4:-18287861 | MS.gene063469:CDS |
| ATCATTTGTGGCCTTCAATA+AGG | 0.268612 | 8.4:-18284035 | MS.gene063469:intron |
| GTCCCAATGGTGAACGTAAA+TGG | 0.291699 | 8.4:+18285378 | None:intergenic |
| GGCCTGTTCTACTGCTTATA+TGG | 0.318153 | 8.4:-18284274 | MS.gene063469:CDS |
| ATCATATATATCTTCATTAT+GGG | 0.322760 | 8.4:-18284174 | MS.gene063469:CDS |
| TTACTCCATGGGAGTATTAG+AGG | 0.330939 | 8.4:+18283492 | None:intergenic |
| ATCATTTCATTCATCTCTCT+TGG | 0.335575 | 8.4:-18287773 | MS.gene063469:CDS |
| TTACCGCACAATACTTTGTT+TGG | 0.354705 | 8.4:-18283530 | MS.gene063469:CDS |
| GTCTGCACAAATAGGCAAAA+TGG | 0.358923 | 8.4:+18284061 | None:intergenic |
| TTCAAGTTTAGTTACGTGTT+TGG | 0.361895 | 8.4:+18283245 | None:intergenic |
| ATGATACAGTCTGCACAAAT+AGG | 0.361999 | 8.4:+18284053 | None:intergenic |
| AACAAGCAATTCCTGTCTTC+GGG | 0.365531 | 8.4:+18284385 | None:intergenic |
| GGGCTACCTTCTTGAGTTCA+AGG | 0.370710 | 8.4:-18283397 | MS.gene063469:CDS |
| TCATTTCATTCATCTCTCTT+GGG | 0.372099 | 8.4:-18287772 | MS.gene063469:CDS |
| ATAGGAATAGAATAAATTAT+AGG | 0.374447 | 8.4:+18284490 | None:intergenic |
| GAGAGATGAATGAAATGATT+AGG | 0.378291 | 8.4:+18287777 | None:intergenic |
| GGATCAAGAACCAGGATTAT+AGG | 0.393457 | 8.4:+18284472 | None:intergenic |
| TACTTAACAAACCTTATTGA+AGG | 0.405603 | 8.4:+18284024 | None:intergenic |
| AAGTTTCTCTTCTCTTCTGC+AGG | 0.413221 | 8.4:-18287747 | MS.gene063469:intron |
| GAGTAAAATGAAGCTTAAAT+GGG | 0.414118 | 8.4:-18283475 | MS.gene063469:CDS |
| TGTGCAGACTGTATCATTTG+TGG | 0.414638 | 8.4:-18284047 | MS.gene063469:CDS |
| CTCAAACCCATTGGTTATTG+TGG | 0.415086 | 8.4:-18283419 | MS.gene063469:CDS |
| GAACAAGCAATTCCTGTCTT+CGG | 0.419995 | 8.4:+18284384 | None:intergenic |
| CGATAAGTGGTTCTTTGATA+AGG | 0.422462 | 8.4:+18287831 | None:intergenic |
| AGAAACCCGTCCTACGGAAC+TGG | 0.423905 | 8.4:-18284429 | MS.gene063469:CDS |
| ACAAGGAACAGGATGATGTT+TGG | 0.426211 | 8.4:-18284331 | MS.gene063469:CDS |
| TTATAGGATAAATCCTGAAA+TGG | 0.429185 | 8.4:+18284506 | None:intergenic |
| TTAAATGCAGATATACTTGT+GGG | 0.429398 | 8.4:-18285483 | MS.gene063469:intron |
| ATGATGTTTGGACTGGTCTC+AGG | 0.430771 | 8.4:-18284319 | MS.gene063469:CDS |
| GATCCGAACTTCTTCCCATC+TGG | 0.432629 | 8.4:-18284454 | MS.gene063469:CDS |
| ATCCATTTACGTTCACCATT+GGG | 0.436059 | 8.4:-18285380 | MS.gene063469:CDS |
| TTATTCTATTCCTATAATCC+TGG | 0.448106 | 8.4:-18284482 | MS.gene063469:CDS |
| TGACCAGATGGGAAGAAGTT+CGG | 0.452574 | 8.4:+18284451 | None:intergenic |
| TCAAACCCATTGGTTATTGT+GGG | 0.453182 | 8.4:-18283418 | MS.gene063469:CDS |
| AAAGCTTATTCACAAGGAAC+AGG | 0.453748 | 8.4:-18284342 | MS.gene063469:CDS |
| ATCCATATAAGCAGTAGAAC+AGG | 0.454270 | 8.4:+18284272 | None:intergenic |
| AATCCATTTACGTTCACCAT+TGG | 0.464929 | 8.4:-18285381 | MS.gene063469:CDS |
| GTTTGGACTGGTCTCAGGAT+TGG | 0.468223 | 8.4:-18284314 | MS.gene063469:CDS |
| TGTTCTACTGCTTATATGGA+TGG | 0.486269 | 8.4:-18284270 | MS.gene063469:CDS |
| ATATATATGATAGAAATAGA+TGG | 0.487731 | 8.4:+18284186 | None:intergenic |
| AAAAGCATGGCAGAGACAAC+GGG | 0.495574 | 8.4:+18285339 | None:intergenic |
| TGGGAATGATATTTCAGTTG+TGG | 0.496055 | 8.4:-18284155 | MS.gene063469:CDS |
| GTACTCCAGTTCCGTAGGAC+GGG | 0.503315 | 8.4:+18284424 | None:intergenic |
| CATTTCATTCATCTCTCTTG+GGG | 0.504192 | 8.4:-18287771 | MS.gene063469:CDS |
| AGAAGGAGAGACCCGAAGAC+AGG | 0.525311 | 8.4:-18284396 | MS.gene063469:CDS |
| AGAAGAAGAAAAGCGAGGAG+AGG | 0.527124 | 8.4:+18287801 | None:intergenic |
| ATTATGTTGACGAATAATCA+TGG | 0.538844 | 8.4:+18283305 | None:intergenic |
| ACAGTTCCCGCGTGTCCCAA+TGG | 0.540790 | 8.4:+18285365 | None:intergenic |
| AGAAGTTCGGATCAAGAACC+AGG | 0.541570 | 8.4:+18284464 | None:intergenic |
| TTTAGTTACGTGTTTGGAGT+GGG | 0.541661 | 8.4:+18283251 | None:intergenic |
| CTTAAATGCAGATATACTTG+TGG | 0.542200 | 8.4:-18285484 | MS.gene063469:intron |
| AGAACAGGCCAGTACATATG+AGG | 0.545080 | 8.4:+18284287 | None:intergenic |
| GGATCGGAGCTCAAACCCAT+TGG | 0.545225 | 8.4:-18283428 | MS.gene063469:CDS |
| GAGAGGAGAATAACGATAAG+TGG | 0.552718 | 8.4:+18287818 | None:intergenic |
| CGAATATCTAACCATGCCAT+TGG | 0.556119 | 8.4:+18287999 | None:intergenic |
| CGTAGAGGATCAAAATCAAA+CGG | 0.558040 | 8.4:+18287949 | None:intergenic |
| TAGATGGAGAAGTTGTGCCT+TGG | 0.560622 | 8.4:+18284202 | None:intergenic |
| GTTCTACTGCTTATATGGAT+GGG | 0.561773 | 8.4:-18284269 | MS.gene063469:CDS |
| AGGACGGGTTTCTGACCAGA+TGG | 0.566451 | 8.4:+18284439 | None:intergenic |
| CAAAAGCATGGCAGAGACAA+CGG | 0.567972 | 8.4:+18285338 | None:intergenic |
| GCAACTACTCTGTCATGGCA+TGG | 0.568403 | 8.4:-18285410 | MS.gene063469:CDS |
| ATCATTGTCTGTCTTATGAA+AGG | 0.570058 | 8.4:-18285312 | MS.gene063469:intron |
| GTTTAGTTACGTGTTTGGAG+TGG | 0.571992 | 8.4:+18283250 | None:intergenic |
| AAAATGAAGCTTAAATGGGG+TGG | 0.578593 | 8.4:-18283471 | MS.gene063469:CDS |
| CTGGTCAGAAACCCGTCCTA+CGG | 0.583333 | 8.4:-18284435 | MS.gene063469:CDS |
| GTAGCCCCACAATAACCAAT+GGG | 0.587492 | 8.4:+18283413 | None:intergenic |
| GAACAGGATGATGTTTGGAC+TGG | 0.587696 | 8.4:-18284326 | MS.gene063469:CDS |
| GGTAGCCCCACAATAACCAA+TGG | 0.593923 | 8.4:+18283412 | None:intergenic |
| AGTACTCCAGTTCCGTAGGA+CGG | 0.594592 | 8.4:+18284423 | None:intergenic |
| TATTGCCTCTAATACTCCCA+TGG | 0.595730 | 8.4:-18283497 | MS.gene063469:CDS |
| GGCTACCTTCTTGAGTTCAA+GGG | 0.600400 | 8.4:-18283396 | MS.gene063469:CDS |
| CATGGCAAGGATGAATATGT+TGG | 0.603928 | 8.4:+18283323 | None:intergenic |
| TCTTGAAAAGCTTATTCACA+AGG | 0.604641 | 8.4:-18284348 | MS.gene063469:CDS |
| TTATATTCTAAAGCTGCAGA+AGG | 0.607717 | 8.4:-18285448 | MS.gene063469:CDS |
| ATCTTACTCGTACAGATCCA+AGG | 0.609110 | 8.4:-18284219 | MS.gene063469:CDS |
| GAAAAGTACTCCAGTTCCGT+AGG | 0.620724 | 8.4:+18284419 | None:intergenic |
| GACAATGATCCACAAAAGCA+TGG | 0.620845 | 8.4:+18285326 | None:intergenic |
| CCTCTGCAACTACTCTGTCA+TGG | 0.622108 | 8.4:-18285415 | MS.gene063469:CDS |
| TAGGAAGAAGAAGAAAAGCG+AGG | 0.632584 | 8.4:+18287796 | None:intergenic |
| ACGTTCACCATTGGGACACG+CGG | 0.637349 | 8.4:-18285372 | MS.gene063469:CDS |
| AGTAAAATGAAGCTTAAATG+GGG | 0.638242 | 8.4:-18283474 | MS.gene063469:CDS |
| GGACGGGTTTCTGACCAGAT+GGG | 0.638285 | 8.4:+18284440 | None:intergenic |
| AGAAACAGTCACCAATGGCA+TGG | 0.643233 | 8.4:-18288010 | None:intergenic |
| CAAACCCATTGGTTATTGTG+GGG | 0.643939 | 8.4:-18283417 | MS.gene063469:CDS |
| TGAATGGCAAGATGCACACA+TGG | 0.646062 | 8.4:-18287925 | MS.gene063469:CDS |
| GATACAGTAGCGCCTCATGT+AGG | 0.648328 | 8.4:+18284242 | None:intergenic |
| CATCTTGCCATTCACCGTAG+AGG | 0.648469 | 8.4:+18287934 | None:intergenic |
| CCATGACAGAGTAGTTGCAG+AGG | 0.655039 | 8.4:+18285415 | None:intergenic |
| GTTGACGAATAATCATGGCA+AGG | 0.661270 | 8.4:+18283310 | None:intergenic |
| CGTTCACCATTGGGACACGC+GGG | 0.676034 | 8.4:-18285371 | MS.gene063469:CDS |
| TGGATGGGAATTCCTACATG+AGG | 0.677531 | 8.4:-18284254 | MS.gene063469:CDS |
| GAACCAAACAAAGTATTGTG+CGG | 0.682686 | 8.4:+18283527 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACAAAATCAATAATTAAAA+AGG | + | chr8.4:18287254-18287273 | None:intergenic | 10.0% |
| !! | TTGAATAAGATAATAAATAA+GGG | - | chr8.4:18287379-18287398 | MS.gene063469:intron | 10.0% |
| !!! | AAAAAAAATAGATTTTATGT+AGG | + | chr8.4:18284486-18284505 | None:intergenic | 10.0% |
| !!! | AATTTAAGATATAATATAAG+AGG | - | chr8.4:18286297-18286316 | MS.gene063469:intron | 10.0% |
| !! | AATATACTTATTTCATATAC+TGG | + | chr8.4:18286422-18286441 | None:intergenic | 15.0% |
| !! | AATCAATAATTAAAAAGGAA+TGG | + | chr8.4:18287249-18287268 | None:intergenic | 15.0% |
| !! | ATAGGAATAGAATAAATTAT+AGG | + | chr8.4:18286751-18286770 | None:intergenic | 15.0% |
| !! | ATATATATGATAGAAATAGA+TGG | + | chr8.4:18287055-18287074 | None:intergenic | 15.0% |
| !! | ATCATATATATCTTCATTAT+GGG | - | chr8.4:18287064-18287083 | MS.gene063469:intron | 15.0% |
| !! | GTTGAATAAGATAATAAATA+AGG | - | chr8.4:18287378-18287397 | MS.gene063469:intron | 15.0% |
| !! | TATCATATATATCTTCATTA+TGG | - | chr8.4:18287063-18287082 | MS.gene063469:intron | 15.0% |
| !! | TATTTGCAATAAATAGTTAA+GGG | + | chr8.4:18287349-18287368 | None:intergenic | 15.0% |
| !! | TTGTAAAAAATACTGAAAAA+TGG | + | chr8.4:18286194-18286213 | None:intergenic | 15.0% |
| !!! | AAGAATGTAAAATCTATTTT+TGG | + | chr8.4:18286130-18286149 | None:intergenic | 15.0% |
| !!! | ATAATAAATAAGGGTATTAT+AGG | - | chr8.4:18287388-18287407 | MS.gene063469:intron | 15.0% |
| !!! | CTTTTTCTTTTTCTTTATTT+TGG | + | chr8.4:18285255-18285274 | None:intergenic | 15.0% |
| !!! | GTATATTTTGTTGTAAAAAT+AGG | - | chr8.4:18284643-18284662 | MS.gene063469:intron | 15.0% |
| !! | AAGTATATTGTTTGAGTAAA+GGG | - | chr8.4:18286433-18286452 | MS.gene063469:intron | 20.0% |
| !! | ATGAAAATATGTAGCAATAT+TGG | + | chr8.4:18287478-18287497 | None:intergenic | 20.0% |
| !! | CTATTTGCAATAAATAGTTA+AGG | + | chr8.4:18287350-18287369 | None:intergenic | 20.0% |
| !! | GCATTAATTAATCATATACA+AGG | + | chr8.4:18285162-18285181 | None:intergenic | 20.0% |
| !! | TAAGTATATTGTTTGAGTAA+AGG | - | chr8.4:18286432-18286451 | MS.gene063469:intron | 20.0% |
| !!! | AAAACTGTTTTCATTATTTC+TGG | + | chr8.4:18285525-18285544 | None:intergenic | 20.0% |
| !!! | CTTATTTTTGAAAACTCTTT+AGG | - | chr8.4:18283620-18283639 | MS.gene063469:intron | 20.0% |
| !!! | CTTTAGAGAAAGAAAAAAAA+AGG | - | chr8.4:18284878-18284897 | MS.gene063469:intron | 20.0% |
| !!! | TGTTGATTAACTAGATTTAA+AGG | + | chr8.4:18287621-18287640 | None:intergenic | 20.0% |
| !!! | TGTTTTTATTTTACCTTGAT+GGG | - | chr8.4:18285436-18285455 | MS.gene063469:CDS | 20.0% |
| !!! | TTTTTTTTTCCTTCAGTAAA+AGG | - | chr8.4:18286589-18286608 | MS.gene063469:intron | 20.0% |
| ! | AAAAACATTTGGATTGCATT+TGG | + | chr8.4:18284789-18284808 | None:intergenic | 25.0% |
| ! | AAGACTAACAATCAAATGAA+AGG | + | chr8.4:18286537-18286556 | None:intergenic | 25.0% |
| ! | ACTTATTGAAAAAAGCTAAG+AGG | + | chr8.4:18283552-18283571 | None:intergenic | 25.0% |
| ! | AGTAAAATGAAGCTTAAATG+GGG | - | chr8.4:18287764-18287783 | MS.gene063469:CDS | 25.0% |
| ! | AGTATATTGTTTGAGTAAAG+GGG | - | chr8.4:18286434-18286453 | MS.gene063469:intron | 25.0% |
| ! | ATATAACTAGATAGCATCTA+AGG | + | chr8.4:18285087-18285106 | None:intergenic | 25.0% |
| ! | ATATACTGGAAAGTTTATCT+TGG | + | chr8.4:18286408-18286427 | None:intergenic | 25.0% |
| ! | ATATTTGAGCAGAAATGTAT+TGG | - | chr8.4:18287650-18287669 | MS.gene063469:intron | 25.0% |
| ! | ATTATGTTGACGAATAATCA+TGG | + | chr8.4:18287936-18287955 | None:intergenic | 25.0% |
| ! | CAAACTTAATCTTCTCAAAT+TGG | + | chr8.4:18286512-18286531 | None:intergenic | 25.0% |
| ! | CAATAATTAAAAAGGAATGG+AGG | + | chr8.4:18287246-18287265 | None:intergenic | 25.0% |
| ! | CGATTAAATTGGTTATCAAA+AGG | - | chr8.4:18283920-18283939 | MS.gene063469:intron | 25.0% |
| ! | CTATAAAAGGTGAAATTGAT+CGG | + | chr8.4:18285201-18285220 | None:intergenic | 25.0% |
| ! | CTTAGCAACACAATAATAAA+GGG | + | chr8.4:18285677-18285696 | None:intergenic | 25.0% |
| ! | GAAACAATAAACATTTGCTT+AGG | + | chr8.4:18285735-18285754 | None:intergenic | 25.0% |
| ! | GAGTAAAATGAAGCTTAAAT+GGG | - | chr8.4:18287763-18287782 | MS.gene063469:CDS | 25.0% |
| ! | GGATTCAAGATCAATTTAAT+AGG | - | chr8.4:18284172-18284191 | MS.gene063469:CDS | 25.0% |
| ! | GTAGAAATAGCTTATACATA+AGG | - | chr8.4:18283700-18283719 | MS.gene063469:intron | 25.0% |
| ! | TACTTAACAAACCTTATTGA+AGG | + | chr8.4:18287217-18287236 | None:intergenic | 25.0% |
| ! | TCTGTATTGGATTAAATTGA+TGG | - | chr8.4:18285961-18285980 | MS.gene063469:intron | 25.0% |
| ! | TCTTATCTCAGAACTATAAA+AGG | + | chr8.4:18285214-18285233 | None:intergenic | 25.0% |
| ! | TGAATGATTATATGCATTTC+CGG | + | chr8.4:18285567-18285586 | None:intergenic | 25.0% |
| ! | TGTATGTTATGTATAGAATC+TGG | - | chr8.4:18284011-18284030 | MS.gene063469:intron | 25.0% |
| ! | TTAAATGCAGATATACTTGT+GGG | - | chr8.4:18285755-18285774 | MS.gene063469:intron | 25.0% |
| ! | TTAATAGGTTATTTGTGACT+GGG | - | chr8.4:18284187-18284206 | MS.gene063469:CDS | 25.0% |
| ! | TTATAGGATAAATCCTGAAA+TGG | + | chr8.4:18286735-18286754 | None:intergenic | 25.0% |
| ! | TTATTCTATTCCTATAATCC+TGG | - | chr8.4:18286756-18286775 | MS.gene063469:intron | 25.0% |
| ! | TTGAGCACTTAATGAATAAT+TGG | + | chr8.4:18284753-18284772 | None:intergenic | 25.0% |
| ! | TTGTAACTTTGACTATAAGA+TGG | + | chr8.4:18285296-18285315 | None:intergenic | 25.0% |
| ! | TTTAATAGGTTATTTGTGAC+TGG | - | chr8.4:18284186-18284205 | MS.gene063469:CDS | 25.0% |
| ! | TTTGGTATCCTTAAAGAAAA+AGG | - | chr8.4:18286375-18286394 | MS.gene063469:intron | 25.0% |
| !! | AACTAGACTGTAACTTTTTA+TGG | + | chr8.4:18287430-18287449 | None:intergenic | 25.0% |
| !! | AATTAATGCATACCCATTTT+TGG | - | chr8.4:18285173-18285192 | MS.gene063469:intron | 25.0% |
| !! | ATAAGTACTAGTACATTTTC+AGG | + | chr8.4:18286050-18286069 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTATATCCAAAC+TGG | - | chr8.4:18284713-18284732 | MS.gene063469:intron | 25.0% |
| !! | TGGAAAGATGAAAGTTATTT+TGG | + | chr8.4:18286174-18286193 | None:intergenic | 25.0% |
| !!! | AAGCTTTTCAAGAAATTAAG+TGG | + | chr8.4:18286883-18286902 | None:intergenic | 25.0% |
| !!! | AAGTTGTTTTTAGCCTATTT+TGG | - | chr8.4:18284435-18284454 | MS.gene063469:CDS | 25.0% |
| !!! | AGCTTTTCAAGAAATTAAGT+GGG | + | chr8.4:18286882-18286901 | None:intergenic | 25.0% |
| !!! | ATTTGATTGTTAGTCTTGTT+TGG | - | chr8.4:18286540-18286559 | MS.gene063469:intron | 25.0% |
| !!! | CTTTAAAACGACAACTAAAT+AGG | + | chr8.4:18287290-18287309 | None:intergenic | 25.0% |
| !!! | GTGTTTTTATTTTACCTTGA+TGG | - | chr8.4:18285435-18285454 | MS.gene063469:CDS | 25.0% |
| !!! | GTTTTCATTATTTCTGGAAA+TGG | + | chr8.4:18285519-18285538 | None:intergenic | 25.0% |
| AAAACTGAGAGAGAAGTAAA+AGG | + | chr8.4:18286472-18286491 | None:intergenic | 30.0% | |
| AAATTGATCGGAACCAAAAA+TGG | + | chr8.4:18285189-18285208 | None:intergenic | 30.0% | |
| AACAACAGCTATTACGTAAT+TGG | + | chr8.4:18284614-18284633 | None:intergenic | 30.0% | |
| AAGTCGTTATGTATAAGCTA+TGG | + | chr8.4:18283795-18283814 | None:intergenic | 30.0% | |
| AATTGATCGGAACCAAAAAT+GGG | + | chr8.4:18285188-18285207 | None:intergenic | 30.0% | |
| ACAACTTATAGACATGACAT+AGG | + | chr8.4:18284422-18284441 | None:intergenic | 30.0% | |
| ACCAAAACTGCTTATAGTTA+AGG | + | chr8.4:18286361-18286380 | None:intergenic | 30.0% | |
| ACCCTAAAATTTATTGCAGA+GGG | + | chr8.4:18285393-18285412 | None:intergenic | 30.0% | |
| ATCATTGTCTGTCTTATGAA+AGG | - | chr8.4:18285926-18285945 | MS.gene063469:intron | 30.0% | |
| ATCATTTCATTCATCTCTCT+TGG | - | chr8.4:18283465-18283484 | MS.gene063469:CDS | 30.0% | |
| ATTGAAGTGAATCATTGTGA+TGG | - | chr8.4:18285463-18285482 | MS.gene063469:CDS | 30.0% | |
| CATTAAGCGTTCGATTAAAT+TGG | - | chr8.4:18283909-18283928 | MS.gene063469:intron | 30.0% | |
| CATTAAGTGCTCAATTAATC+TGG | - | chr8.4:18284759-18284778 | MS.gene063469:intron | 30.0% | |
| CCAAAACTGCTTATAGTTAA+GGG | + | chr8.4:18286360-18286379 | None:intergenic | 30.0% | |
| CTTAAATGCAGATATACTTG+TGG | - | chr8.4:18285754-18285773 | MS.gene063469:intron | 30.0% | |
| GAGAGATGAATGAAATGATT+AGG | + | chr8.4:18283464-18283483 | None:intergenic | 30.0% | |
| GCTTAGCAACACAATAATAA+AGG | + | chr8.4:18285678-18285697 | None:intergenic | 30.0% | |
| GGAGTAAAATGAAGCTTAAA+TGG | - | chr8.4:18287762-18287781 | MS.gene063469:CDS | 30.0% | |
| TAAGCAATGAATATGCTGAA+TGG | - | chr8.4:18285693-18285712 | MS.gene063469:intron | 30.0% | |
| TAATAGGTTATTTGTGACTG+GGG | - | chr8.4:18284188-18284207 | MS.gene063469:CDS | 30.0% | |
| TACATTTCTGCTCAAATATG+AGG | + | chr8.4:18287649-18287668 | None:intergenic | 30.0% | |
| TATAGCATGATCATTTGTCA+TGG | + | chr8.4:18284685-18284704 | None:intergenic | 30.0% | |
| TCATTTCATTCATCTCTCTT+GGG | - | chr8.4:18283466-18283485 | MS.gene063469:CDS | 30.0% | |
| TCTTGAAAAGCTTATTCACA+AGG | - | chr8.4:18286890-18286909 | MS.gene063469:intron | 30.0% | |
| ! | AAAATGTCTTTTTACAGCTC+TGG | - | chr8.4:18287867-18287886 | MS.gene063469:CDS | 30.0% |
| ! | AAATGTCTTTTTACAGCTCT+GGG | - | chr8.4:18287868-18287887 | MS.gene063469:CDS | 30.0% |
| ! | ATGTGTTACAATCAGCTTTT+TGG | - | chr8.4:18286695-18286714 | MS.gene063469:intron | 30.0% |
| ! | ATTGATGTCCTCTATTTTAC+TGG | - | chr8.4:18285056-18285075 | MS.gene063469:intron | 30.0% |
| ! | CATAACATTTCAGTTTTCAG+TGG | + | chr8.4:18286224-18286243 | None:intergenic | 30.0% |
| ! | CATTTTACACCTTTTACTGA+AGG | + | chr8.4:18286601-18286620 | None:intergenic | 30.0% |
| ! | CTAAAATTACTCCCCATTTT+AGG | - | chr8.4:18285126-18285145 | MS.gene063469:intron | 30.0% |
| ! | CTTTTAAATGCTTGGTAAGT+GGG | + | chr8.4:18286260-18286279 | None:intergenic | 30.0% |
| ! | GAAAGAGCATAGTTATAACT+GGG | + | chr8.4:18284255-18284274 | None:intergenic | 30.0% |
| ! | GATTGAGGAATTTCTGTTTT+GGG | - | chr8.4:18285345-18285364 | MS.gene063469:CDS | 30.0% |
| ! | GTATCGTTCCTTTTTCTTTA+AGG | + | chr8.4:18286386-18286405 | None:intergenic | 30.0% |
| ! | TAAGCTTCATTTTACTCCAT+GGG | + | chr8.4:18287760-18287779 | None:intergenic | 30.0% |
| ! | TACGTTTTCACAAAGTAAAC+AGG | - | chr8.4:18285651-18285670 | MS.gene063469:intron | 30.0% |
| ! | TCCCTCTGCAATAAATTTTA+GGG | - | chr8.4:18285389-18285408 | MS.gene063469:CDS | 30.0% |
| ! | TTAAGCTTCATTTTACTCCA+TGG | + | chr8.4:18287761-18287780 | None:intergenic | 30.0% |
| ! | TTCAAGTTTAGTTACGTGTT+TGG | + | chr8.4:18287996-18288015 | None:intergenic | 30.0% |
| ! | TTGATGTCCTCTATTTTACT+GGG | - | chr8.4:18285057-18285076 | MS.gene063469:intron | 30.0% |
| !! | GCTTTTCAAGAAATTAAGTG+GGG | + | chr8.4:18286881-18286900 | None:intergenic | 30.0% |
| !! | GTATAAGCTATGGTCATTTT+TGG | + | chr8.4:18283785-18283804 | None:intergenic | 30.0% |
| !! | TAACGGGTTATTAGGAAATT+AGG | - | chr8.4:18284085-18284104 | MS.gene063469:CDS | 30.0% |
| !! | TTACAATCAGCTTTTTGGTA+TGG | - | chr8.4:18286700-18286719 | MS.gene063469:intron | 30.0% |
| !! | TTATATTCTAAAGCTGCAGA+AGG | - | chr8.4:18285790-18285809 | MS.gene063469:intron | 30.0% |
| !!! | TGCAATCCAAATGTTTTTTG+CGG | - | chr8.4:18284791-18284810 | MS.gene063469:intron | 30.0% |
| !!! | TTCTGATTTTTAGCTTTGCA+CGG | - | chr8.4:18287148-18287167 | MS.gene063469:intron | 30.0% |
| AAAATGAAGCTTAAATGGGG+TGG | - | chr8.4:18287767-18287786 | MS.gene063469:CDS | 35.0% | |
| AAACAGGTGAGGAGTTATAA+CGG | - | chr8.4:18284068-18284087 | MS.gene063469:CDS | 35.0% | |
| AAAGCTTATTCACAAGGAAC+AGG | - | chr8.4:18286896-18286915 | MS.gene063469:intron | 35.0% | |
| AACCAAAAACTGTGGCAAAA+AGG | + | chr8.4:18287121-18287140 | None:intergenic | 35.0% | |
| AAGGGGAATAAGAAGGAAAA+AGG | + | chr8.4:18286663-18286682 | None:intergenic | 35.0% | |
| AATCCATTTACGTTCACCAT+TGG | - | chr8.4:18285857-18285876 | MS.gene063469:intron | 35.0% | |
| AGATTGTTTGACAGAGCTTA+AGG | - | chr8.4:18284390-18284409 | MS.gene063469:CDS | 35.0% | |
| AGGATTTGTCTCACCTAAAA+TGG | + | chr8.4:18285142-18285161 | None:intergenic | 35.0% | |
| AGGGGAATAAGAAGGAAAAA+GGG | + | chr8.4:18286662-18286681 | None:intergenic | 35.0% | |
| ATCATTTGTGGCCTTCAATA+AGG | - | chr8.4:18287203-18287222 | MS.gene063469:intron | 35.0% | |
| ATCCATATAAGCAGTAGAAC+AGG | + | chr8.4:18286969-18286988 | None:intergenic | 35.0% | |
| ATCCATTTACGTTCACCATT+GGG | - | chr8.4:18285858-18285877 | MS.gene063469:intron | 35.0% | |
| ATGACCATAGCTTATACGTA+AGG | - | chr8.4:18283866-18283885 | MS.gene063469:intron | 35.0% | |
| ATGACCTTACGTATAAGCTA+TGG | + | chr8.4:18283873-18283892 | None:intergenic | 35.0% | |
| ATGATACAGTCTGCACAAAT+AGG | + | chr8.4:18287188-18287207 | None:intergenic | 35.0% | |
| CACACACACACATATACATA+TGG | - | chr8.4:18287588-18287607 | MS.gene063469:intron | 35.0% | |
| CACACATATACATATGGCAA+CGG | - | chr8.4:18287594-18287613 | MS.gene063469:intron | 35.0% | |
| CATTTCATTCATCTCTCTTG+GGG | - | chr8.4:18283467-18283486 | MS.gene063469:CDS | 35.0% | |
| CCTTGCATTAATCATATGCA+GGG | + | chr8.4:18284316-18284335 | None:intergenic | 35.0% | |
| CGATAAGTGGTTCTTTGATA+AGG | + | chr8.4:18283410-18283429 | None:intergenic | 35.0% | |
| CGTAGAGGATCAAAATCAAA+CGG | + | chr8.4:18283292-18283311 | None:intergenic | 35.0% | |
| CTGATTCTAGTCCAATGTAT+GGG | - | chr8.4:18285015-18285034 | MS.gene063469:intron | 35.0% | |
| GAATTTGGAGAGAGATAAGA+AGG | - | chr8.4:18284954-18284973 | MS.gene063469:intron | 35.0% | |
| GACCCTAAAATTTATTGCAG+AGG | + | chr8.4:18285394-18285413 | None:intergenic | 35.0% | |
| GAGAAAGAAAAAAAAAGGCG+AGG | - | chr8.4:18284883-18284902 | MS.gene063469:intron | 35.0% | |
| GATTTGTCTCACCTAAAATG+GGG | + | chr8.4:18285140-18285159 | None:intergenic | 35.0% | |
| GGATTTGCCTCAACTAAAAT+GGG | + | chr8.4:18284295-18284314 | None:intergenic | 35.0% | |
| GGATTTGTCTCACCTAAAAT+GGG | + | chr8.4:18285141-18285160 | None:intergenic | 35.0% | |
| GGTTATTAGGAAATTAGGAG+AGG | - | chr8.4:18284090-18284109 | MS.gene063469:CDS | 35.0% | |
| GTATAAGCTATGGTCATGTT+TGG | + | chr8.4:18283863-18283882 | None:intergenic | 35.0% | |
| GTTCTACTGCTTATATGGAT+GGG | - | chr8.4:18286969-18286988 | MS.gene063469:intron | 35.0% | |
| TAAAATGTGAGGGTTGTGTT+AGG | - | chr8.4:18284552-18284571 | MS.gene063469:intron | 35.0% | |
| TACTAGTACTTATGAGCAGT+TGG | - | chr8.4:18286057-18286076 | MS.gene063469:intron | 35.0% | |
| TCCTTGCATTAATCATATGC+AGG | + | chr8.4:18284317-18284336 | None:intergenic | 35.0% | |
| TCGAACGCTTAATGAGTAAT+CGG | + | chr8.4:18283903-18283922 | None:intergenic | 35.0% | |
| TCTCCAAAATCTCTATCATC+TGG | + | chr8.4:18284116-18284135 | None:intergenic | 35.0% | |
| TCTGATTCTAGTCCAATGTA+TGG | - | chr8.4:18285014-18285033 | MS.gene063469:intron | 35.0% | |
| TGATTCTAGTCCAATGTATG+GGG | - | chr8.4:18285016-18285035 | MS.gene063469:intron | 35.0% | |
| TGCACTTTATAGAGCAAAAC+AGG | - | chr8.4:18284052-18284071 | MS.gene063469:CDS | 35.0% | |
| TGGGAATGATATTTCAGTTG+TGG | - | chr8.4:18287083-18287102 | MS.gene063469:intron | 35.0% | |
| TGGTAAGTGGGAAAAAAAAC+AGG | + | chr8.4:18286248-18286267 | None:intergenic | 35.0% | |
| TGTCTGTCTTATGAAAGGTA+TGG | - | chr8.4:18285931-18285950 | MS.gene063469:intron | 35.0% | |
| TGTTCTACTGCTTATATGGA+TGG | - | chr8.4:18286968-18286987 | MS.gene063469:intron | 35.0% | |
| TTACCGCACAATACTTTGTT+TGG | - | chr8.4:18287708-18287727 | MS.gene063469:intron | 35.0% | |
| TTGTCACATAAGATCCAGTT+TGG | + | chr8.4:18284730-18284749 | None:intergenic | 35.0% | |
| TTTATAGAGCAAAACAGGTG+AGG | - | chr8.4:18284057-18284076 | MS.gene063469:CDS | 35.0% | |
| TTTATTGCAGAGGGACAAAA+TGG | + | chr8.4:18285384-18285403 | None:intergenic | 35.0% | |
| TTTGACATGTTCATCGTTTC+CGG | - | chr8.4:18285545-18285564 | MS.gene063469:intron | 35.0% | |
| ! | AATGTTGTTCTCGGTTTTAC+TGG | - | chr8.4:18284212-18284231 | MS.gene063469:CDS | 35.0% |
| ! | ATGTTGTTCTCGGTTTTACT+GGG | - | chr8.4:18284213-18284232 | MS.gene063469:CDS | 35.0% |
| ! | CCCTTAACTATAAGCAGTTT+TGG | - | chr8.4:18286357-18286376 | MS.gene063469:intron | 35.0% |
| ! | CTTCTCAGCTTTTAAATGCT+TGG | + | chr8.4:18286268-18286287 | None:intergenic | 35.0% |
| ! | GAATCGACAAAATTTTGTCG+AGG | + | chr8.4:18284578-18284597 | None:intergenic | 35.0% |
| ! | GATTGTCTTGCATTCTTTTG+TGG | - | chr8.4:18287789-18287808 | MS.gene063469:CDS | 35.0% |
| ! | GCTTTTAAATGCTTGGTAAG+TGG | + | chr8.4:18286261-18286280 | None:intergenic | 35.0% |
| ! | GGAAAGAGCATAGTTATAAC+TGG | + | chr8.4:18284256-18284275 | None:intergenic | 35.0% |
| ! | GGATTGAGGAATTTCTGTTT+TGG | - | chr8.4:18285344-18285363 | MS.gene063469:CDS | 35.0% |
| ! | GTAGATTGAAAGGTTTTCTG+TGG | - | chr8.4:18283979-18283998 | MS.gene063469:intron | 35.0% |
| ! | GTCCCTCTGCAATAAATTTT+AGG | - | chr8.4:18285388-18285407 | MS.gene063469:CDS | 35.0% |
| ! | TCAAACCCATTGGTTATTGT+GGG | - | chr8.4:18287820-18287839 | MS.gene063469:CDS | 35.0% |
| ! | TCTTGCATTCTTTTGTGGAT+CGG | - | chr8.4:18287794-18287813 | MS.gene063469:CDS | 35.0% |
| ! | TTACATCGTGTTTTCTGATG+CGG | - | chr8.4:18283358-18283377 | MS.gene063469:CDS | 35.0% |
| ! | TTTAGTTACGTGTTTGGAGT+GGG | + | chr8.4:18287990-18288009 | None:intergenic | 35.0% |
| ! | TTTTACCCTTGAACTCAAGA+AGG | + | chr8.4:18287850-18287869 | None:intergenic | 35.0% |
| ! | TTTTTCCTTCTTATTCCCCT+TGG | - | chr8.4:18286662-18286681 | MS.gene063469:intron | 35.0% |
| !! | AGGAGTTATAACGGGTTATT+AGG | - | chr8.4:18284077-18284096 | MS.gene063469:CDS | 35.0% |
| !! | CGTTTGATTTTGATCCTCTA+CGG | - | chr8.4:18283290-18283309 | MS.gene063469:CDS | 35.0% |
| !! | GAACCAAACAAAGTATTGTG+CGG | + | chr8.4:18287714-18287733 | None:intergenic | 35.0% |
| !! | GATTTTGGAGAGAGATAGAA+AGG | - | chr8.4:18284125-18284144 | MS.gene063469:CDS | 35.0% |
| !! | TTGGTTTTCCTCATATGTAC+TGG | - | chr8.4:18286943-18286962 | MS.gene063469:intron | 35.0% |
| !!! | TCTGATTTTTAGCTTTGCAC+GGG | - | chr8.4:18287149-18287168 | MS.gene063469:intron | 35.0% |
| !!! | TGTACTTCCCATTTTAGTTG+AGG | - | chr8.4:18284285-18284304 | MS.gene063469:CDS | 35.0% |
| AACAAGCAATTCCTGTCTTC+GGG | + | chr8.4:18286856-18286875 | None:intergenic | 40.0% | |
| AACACATTACCTGCAAACCA+AGG | + | chr8.4:18286682-18286701 | None:intergenic | 40.0% | |
| AACAGGTGAGGAGTTATAAC+GGG | - | chr8.4:18284069-18284088 | MS.gene063469:CDS | 40.0% | |
| AAGGCGAGGAGTTAATAAAC+AGG | - | chr8.4:18284897-18284916 | MS.gene063469:intron | 40.0% | |
| AAGTTTCTCTTCTCTTCTGC+AGG | - | chr8.4:18283491-18283510 | MS.gene063469:CDS | 40.0% | |
| AATCTGGATTCTCCTTGATG+AGG | - | chr8.4:18284027-18284046 | MS.gene063469:intron | 40.0% | |
| ACAAGCTGAACCAAAAACTG+TGG | + | chr8.4:18287129-18287148 | None:intergenic | 40.0% | |
| ACAAGGAACAGGATGATGTT+TGG | - | chr8.4:18286907-18286926 | MS.gene063469:intron | 40.0% | |
| ACACATTACCTGCAAACCAA+GGG | + | chr8.4:18286681-18286700 | None:intergenic | 40.0% | |
| AGGAGATCCCAGTAAAATAG+AGG | + | chr8.4:18285067-18285086 | None:intergenic | 40.0% | |
| AGTCCAATGTATGGGGTTAT+TGG | - | chr8.4:18285023-18285042 | MS.gene063469:intron | 40.0% | |
| ATAAACAGAGATCAGATGCG+TGG | + | chr8.4:18287677-18287696 | None:intergenic | 40.0% | |
| ATAAAGTGCATCCCTCATCA+AGG | + | chr8.4:18284042-18284061 | None:intergenic | 40.0% | |
| ATCTGGATTCTCCTTGATGA+GGG | - | chr8.4:18284028-18284047 | MS.gene063469:intron | 40.0% | |
| ATCTTACTCGTACAGATCCA+AGG | - | chr8.4:18287019-18287038 | MS.gene063469:intron | 40.0% | |
| CACTTCAATAGTTCCCATCA+AGG | + | chr8.4:18285452-18285471 | None:intergenic | 40.0% | |
| CATGGCAAGGATGAATATGT+TGG | + | chr8.4:18287918-18287937 | None:intergenic | 40.0% | |
| CCCTGCATATGATTAATGCA+AGG | - | chr8.4:18284313-18284332 | MS.gene063469:CDS | 40.0% | |
| CCTGAAGAGTTCACCAAAAT+AGG | + | chr8.4:18284451-18284470 | None:intergenic | 40.0% | |
| CTAAAGTACATCCCTCATCT+AGG | + | chr8.4:18284864-18284883 | None:intergenic | 40.0% | |
| CTAGAATCAGAATCTTCTCC+AGG | + | chr8.4:18285005-18285024 | None:intergenic | 40.0% | |
| CTGATCTCTGTTTATCTTGC+AGG | - | chr8.4:18287682-18287701 | MS.gene063469:intron | 40.0% | |
| GAACAAGCAATTCCTGTCTT+CGG | + | chr8.4:18286857-18286876 | None:intergenic | 40.0% | |
| GACAATGATCCACAAAAGCA+TGG | + | chr8.4:18285915-18285934 | None:intergenic | 40.0% | |
| GAGAGGAGAATAACGATAAG+TGG | + | chr8.4:18283423-18283442 | None:intergenic | 40.0% | |
| GGATCAAGAACCAGGATTAT+AGG | + | chr8.4:18286769-18286788 | None:intergenic | 40.0% | |
| GGGAATAAGAAGGAAAAAGG+GGG | + | chr8.4:18286660-18286679 | None:intergenic | 40.0% | |
| GGGATTTGCCTCAACTAAAA+TGG | + | chr8.4:18284296-18284315 | None:intergenic | 40.0% | |
| GGGGAATAAGAAGGAAAAAG+GGG | + | chr8.4:18286661-18286680 | None:intergenic | 40.0% | |
| GTCTGCACAAATAGGCAAAA+TGG | + | chr8.4:18287180-18287199 | None:intergenic | 40.0% | |
| GTTGACGAATAATCATGGCA+AGG | + | chr8.4:18287931-18287950 | None:intergenic | 40.0% | |
| GTTTAGTTACGTGTTTGGAG+TGG | + | chr8.4:18287991-18288010 | None:intergenic | 40.0% | |
| TAGAAGATAGAGAGCAAGAG+AGG | - | chr8.4:18284932-18284951 | MS.gene063469:intron | 40.0% | |
| TAGAGAGCAAGAGAGGAATT+TGG | - | chr8.4:18284939-18284958 | MS.gene063469:intron | 40.0% | |
| TAGGAAGAAGAAGAAAAGCG+AGG | + | chr8.4:18283445-18283464 | None:intergenic | 40.0% | |
| TAGTACTTATGAGCAGTTGG+TGG | - | chr8.4:18286060-18286079 | MS.gene063469:intron | 40.0% | |
| TATTGCCTCTAATACTCCCA+TGG | - | chr8.4:18287741-18287760 | MS.gene063469:intron | 40.0% | |
| TCACAGCCGCAAAAAACATT+TGG | + | chr8.4:18284800-18284819 | None:intergenic | 40.0% | |
| TCACCAATAACCCCATACAT+TGG | + | chr8.4:18285029-18285048 | None:intergenic | 40.0% | |
| TGTGCAGACTGTATCATTTG+TGG | - | chr8.4:18287191-18287210 | MS.gene063469:intron | 40.0% | |
| TTCTGTGGAGGTAGATTGAA+AGG | - | chr8.4:18283969-18283988 | MS.gene063469:intron | 40.0% | |
| TTGGTTGACACAGCAAAGAA+AGG | - | chr8.4:18286559-18286578 | MS.gene063469:intron | 40.0% | |
| ! | AATTTGGCTTCTCCTAGATG+AGG | - | chr8.4:18284849-18284868 | MS.gene063469:intron | 40.0% |
| ! | AGGCCAGATGATAGAGATTT+TGG | - | chr8.4:18284110-18284129 | MS.gene063469:CDS | 40.0% |
| ! | ATGGGAAGTACACTATACAG+AGG | + | chr8.4:18284277-18284296 | None:intergenic | 40.0% |
| ! | ATTTGGCTTCTCCTAGATGA+GGG | - | chr8.4:18284850-18284869 | MS.gene063469:intron | 40.0% |
| ! | CAAACCCATTGGTTATTGTG+GGG | - | chr8.4:18287821-18287840 | MS.gene063469:CDS | 40.0% |
| ! | CTCAAACCCATTGGTTATTG+TGG | - | chr8.4:18287819-18287838 | MS.gene063469:CDS | 40.0% |
| ! | CTCCTTTTTGCCACAGTTTT+TGG | - | chr8.4:18287116-18287135 | MS.gene063469:intron | 40.0% |
| ! | GTATGGTTCTGCTTCTGTAT+TGG | - | chr8.4:18285948-18285967 | MS.gene063469:intron | 40.0% |
| ! | TGATACCCCTTGTTTCATGA+GGG | - | chr8.4:18286326-18286345 | MS.gene063469:intron | 40.0% |
| ! | TTGATACCCCTTGTTTCATG+AGG | - | chr8.4:18286325-18286344 | MS.gene063469:intron | 40.0% |
| ! | TTTTGATCCTCTACGGTGAA+TGG | - | chr8.4:18283297-18283316 | MS.gene063469:CDS | 40.0% |
| !! | ATGGACTTGTTGTCCATTTC+AGG | - | chr8.4:18286719-18286738 | MS.gene063469:intron | 40.0% |
| !! | GAACTGGAGTACTTTTCAGA+AGG | - | chr8.4:18286825-18286844 | MS.gene063469:intron | 40.0% |
| !! | TCAAAAGGCATTCCAAGTGT+TGG | - | chr8.4:18283935-18283954 | MS.gene063469:intron | 40.0% |
| !! | TTACTCCATGGGAGTATTAG+AGG | + | chr8.4:18287749-18287768 | None:intergenic | 40.0% |
| !! | TTTGTCGATTCTCTCTGACA+TGG | - | chr8.4:18284587-18284606 | MS.gene063469:intron | 40.0% |
| !!! | CCTATTTTGGTGAACTCTTC+AGG | - | chr8.4:18284448-18284467 | MS.gene063469:CDS | 40.0% |
| AGAACAGGCCAGTACATATG+AGG | + | chr8.4:18286954-18286973 | None:intergenic | 45.0% | |
| AGAAGAAGAAAAGCGAGGAG+AGG | + | chr8.4:18283440-18283459 | None:intergenic | 45.0% | |
| AGAAGTTCGGATCAAGAACC+AGG | + | chr8.4:18286777-18286796 | None:intergenic | 45.0% | |
| AGAGATAAGAAGGCCAGAGA+GGG | - | chr8.4:18284964-18284983 | MS.gene063469:intron | 45.0% | |
| AGAGATAGAAAGGCTGGAGA+GGG | - | chr8.4:18284135-18284154 | MS.gene063469:CDS | 45.0% | |
| AGCTCTCACAAACCAACACT+TGG | + | chr8.4:18283950-18283969 | None:intergenic | 45.0% | |
| AGCTTCAGGTATGCATAGCA+AGG | + | chr8.4:18284528-18284547 | None:intergenic | 45.0% | |
| CACATTACCTGCAAACCAAG+GGG | + | chr8.4:18286680-18286699 | None:intergenic | 45.0% | |
| GAACAGGATGATGTTTGGAC+TGG | - | chr8.4:18286912-18286931 | MS.gene063469:intron | 45.0% | |
| GAAGCTCGGGTAAAATGTGA+GGG | - | chr8.4:18284542-18284561 | MS.gene063469:CDS | 45.0% | |
| GCAAACCAAGGGGAATAAGA+AGG | + | chr8.4:18286670-18286689 | None:intergenic | 45.0% | |
| GGCCTGTTCTACTGCTTATA+TGG | - | chr8.4:18286964-18286983 | MS.gene063469:intron | 45.0% | |
| GGCTACCTTCTTGAGTTCAA+GGG | - | chr8.4:18287842-18287861 | MS.gene063469:CDS | 45.0% | |
| GTAGCCCCACAATAACCAAT+GGG | + | chr8.4:18287828-18287847 | None:intergenic | 45.0% | |
| GTCCCAATGGTGAACGTAAA+TGG | + | chr8.4:18285863-18285882 | None:intergenic | 45.0% | |
| TAGATGGAGAAGTTGTGCCT+TGG | + | chr8.4:18287039-18287058 | None:intergenic | 45.0% | |
| TGAAGCTCGGGTAAAATGTG+AGG | - | chr8.4:18284541-18284560 | MS.gene063469:CDS | 45.0% | |
| TGAATGGCAAGATGCACACA+TGG | - | chr8.4:18283313-18283332 | MS.gene063469:CDS | 45.0% | |
| TGACCAGATGGGAAGAAGTT+CGG | + | chr8.4:18286790-18286809 | None:intergenic | 45.0% | |
| TGCTATGCATACCTGAAGCT+CGG | - | chr8.4:18284528-18284547 | MS.gene063469:CDS | 45.0% | |
| TGGATGGGAATTCCTACATG+AGG | - | chr8.4:18286984-18287003 | MS.gene063469:intron | 45.0% | |
| TGTATGGGGTTATTGGTGAG+AGG | - | chr8.4:18285030-18285049 | MS.gene063469:intron | 45.0% | |
| TTGGAGAGAGATAGAAAGGC+TGG | - | chr8.4:18284129-18284148 | MS.gene063469:CDS | 45.0% | |
| ! | AAAAGCATGGCAGAGACAAC+GGG | + | chr8.4:18285902-18285921 | None:intergenic | 45.0% |
| ! | CAAAAGCATGGCAGAGACAA+CGG | + | chr8.4:18285903-18285922 | None:intergenic | 45.0% |
| ! | CTGCTTATAGTTAAGGGCAC+CGG | + | chr8.4:18286354-18286373 | None:intergenic | 45.0% |
| ! | GAGTAGTTGCAGAGGTTTTC+AGG | + | chr8.4:18285818-18285837 | None:intergenic | 45.0% |
| ! | TCACATTTTACCCGAGCTTC+AGG | + | chr8.4:18284542-18284561 | None:intergenic | 45.0% |
| ! | TTGTCTCTGCCATGCTTTTG+TGG | - | chr8.4:18285903-18285922 | MS.gene063469:intron | 45.0% |
| !! | ATGATGTTTGGACTGGTCTC+AGG | - | chr8.4:18286919-18286938 | MS.gene063469:intron | 45.0% |
| !! | GAAAAGTACTCCAGTTCCGT+AGG | + | chr8.4:18286822-18286841 | None:intergenic | 45.0% |
| !! | TCTTATTCCCCTTGGTTTGC+AGG | - | chr8.4:18286670-18286689 | MS.gene063469:intron | 45.0% |
| !! | TTGGTTTGTGAGAGCTTCTG+TGG | - | chr8.4:18283954-18283973 | MS.gene063469:intron | 45.0% |
| !! | TTATATCTTAAATTATAATA+TGG | + | chr8.4:18286291-18286310 | None:intergenic | 5.0% |
| !! | TTTATATAAAATATAGAATT+TGG | - | chr8.4:18284833-18284852 | MS.gene063469:intron | 5.0% |
| ACCGGTACCCTCATGAAACA+AGG | + | chr8.4:18286336-18286355 | None:intergenic | 50.0% | |
| AGTACTCCAGTTCCGTAGGA+CGG | + | chr8.4:18286818-18286837 | None:intergenic | 50.0% | |
| CATCTTGCCATTCACCGTAG+AGG | + | chr8.4:18283307-18283326 | None:intergenic | 50.0% | |
| CCATGACAGAGTAGTTGCAG+AGG | + | chr8.4:18285826-18285845 | None:intergenic | 50.0% | |
| CCGGTACCCTCATGAAACAA+GGG | + | chr8.4:18286335-18286354 | None:intergenic | 50.0% | |
| CCTCTGCAACTACTCTGTCA+TGG | - | chr8.4:18285823-18285842 | MS.gene063469:intron | 50.0% | |
| CGGTACCCTCATGAAACAAG+GGG | + | chr8.4:18286334-18286353 | None:intergenic | 50.0% | |
| GACTGGGGCAATGTTGTTCT+CGG | - | chr8.4:18284203-18284222 | MS.gene063469:CDS | 50.0% | |
| GAGAGATAAGAAGGCCAGAG+AGG | - | chr8.4:18284963-18284982 | MS.gene063469:intron | 50.0% | |
| GAGAGATAGAAAGGCTGGAG+AGG | - | chr8.4:18284134-18284153 | MS.gene063469:CDS | 50.0% | |
| GAGATAAGAAGGCCAGAGAG+GGG | - | chr8.4:18284965-18284984 | MS.gene063469:intron | 50.0% | |
| GAGATAGAAAGGCTGGAGAG+GGG | - | chr8.4:18284136-18284155 | MS.gene063469:CDS | 50.0% | |
| GATACAGTAGCGCCTCATGT+AGG | + | chr8.4:18286999-18287018 | None:intergenic | 50.0% | |
| GATCCGAACTTCTTCCCATC+TGG | - | chr8.4:18286784-18286803 | MS.gene063469:intron | 50.0% | |
| GCAACTACTCTGTCATGGCA+TGG | - | chr8.4:18285828-18285847 | MS.gene063469:intron | 50.0% | |
| GCTATGCATACCTGAAGCTC+GGG | - | chr8.4:18284529-18284548 | MS.gene063469:CDS | 50.0% | |
| GGGCTACCTTCTTGAGTTCA+AGG | - | chr8.4:18287841-18287860 | MS.gene063469:CDS | 50.0% | |
| GGTAGCCCCACAATAACCAA+TGG | + | chr8.4:18287829-18287848 | None:intergenic | 50.0% | |
| GTTTGTGAGAGCTTCTGTGG+AGG | - | chr8.4:18283957-18283976 | MS.gene063469:intron | 50.0% | |
| ! | CCCTTGTTTCATGAGGGTAC+CGG | - | chr8.4:18286332-18286351 | MS.gene063469:intron | 50.0% |
| ! | TCTCGGTTTTACTGGGACCA+GGG | - | chr8.4:18284220-18284239 | MS.gene063469:CDS | 50.0% |
| ! | TTCTCGGTTTTACTGGGACC+AGG | - | chr8.4:18284219-18284238 | MS.gene063469:CDS | 50.0% |
| !! | GTTTGGACTGGTCTCAGGAT+TGG | - | chr8.4:18286924-18286943 | MS.gene063469:intron | 50.0% |
| ACGTTCACCATTGGGACACG+CGG | - | chr8.4:18285866-18285885 | MS.gene063469:intron | 55.0% | |
| AGAAACCCGTCCTACGGAAC+TGG | - | chr8.4:18286809-18286828 | MS.gene063469:intron | 55.0% | |
| AGAAGGAGAGACCCGAAGAC+AGG | - | chr8.4:18286842-18286861 | MS.gene063469:intron | 55.0% | |
| AGCTCTCTCTAACCCCTCTC+TGG | + | chr8.4:18284980-18284999 | None:intergenic | 55.0% | |
| AGTGTTGCGAGTGTGAGACG+TGG | - | chr8.4:18285323-18285342 | MS.gene063469:CDS | 55.0% | |
| CTGGTCAGAAACCCGTCCTA+CGG | - | chr8.4:18286803-18286822 | MS.gene063469:intron | 55.0% | |
| GAGAGGGGTTGGAGAGGATT+CGG | - | chr8.4:18284151-18284170 | MS.gene063469:CDS | 55.0% | |
| GGATCGGAGCTCAAACCCAT+TGG | - | chr8.4:18287810-18287829 | MS.gene063469:CDS | 55.0% | |
| GTACTCCAGTTCCGTAGGAC+GGG | + | chr8.4:18286817-18286836 | None:intergenic | 55.0% | |
| TAACTGGGTAGCAGCTACCC+TGG | + | chr8.4:18284240-18284259 | None:intergenic | 55.0% | |
| TAGAAAGGCTGGAGAGGGGT+TGG | - | chr8.4:18284140-18284159 | MS.gene063469:CDS | 55.0% | |
| ! | AGGACGGGTTTCTGACCAGA+TGG | + | chr8.4:18286802-18286821 | None:intergenic | 55.0% |
| ! | CGAGTGTGAGACGTGGATTG+AGG | - | chr8.4:18285330-18285349 | MS.gene063469:CDS | 55.0% |
| ! | GCGGCTTCTCTTGTTGCTTC+TGG | - | chr8.4:18283377-18283396 | MS.gene063469:CDS | 55.0% |
| ! | GGACGGGTTTCTGACCAGAT+GGG | + | chr8.4:18286801-18286820 | None:intergenic | 55.0% |
| ACAGTTCCCGCGTGTCCCAA+TGG | + | chr8.4:18285876-18285895 | None:intergenic | 60.0% | |
| CGTTCACCATTGGGACACGC+GGG | - | chr8.4:18285867-18285886 | MS.gene063469:intron | 60.0% | |
| GGGGTTAGAGAGAGCTCTCC+TGG | - | chr8.4:18284984-18285003 | MS.gene063469:intron | 60.0% | |
| AGGCTGGAGAGGGGTTGGAG+AGG | - | chr8.4:18284145-18284164 | MS.gene063469:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 18283242 | 18288018 | 18283242 | ID=MS.gene063469 |
| chr8.4 | mRNA | 18283242 | 18288018 | 18283242 | ID=MS.gene063469.t1;Parent=MS.gene063469 |
| chr8.4 | exon | 18287748 | 18288018 | 18287748 | ID=MS.gene063469.t1.exon1;Parent=MS.gene063469.t1 |
| chr8.4 | CDS | 18287748 | 18288018 | 18287748 | ID=cds.MS.gene063469.t1;Parent=MS.gene063469.t1 |
| chr8.4 | exon | 18285313 | 18285495 | 18285313 | ID=MS.gene063469.t1.exon2;Parent=MS.gene063469.t1 |
| chr8.4 | CDS | 18285313 | 18285495 | 18285313 | ID=cds.MS.gene063469.t1;Parent=MS.gene063469.t1 |
| chr8.4 | exon | 18284036 | 18284568 | 18284036 | ID=MS.gene063469.t1.exon3;Parent=MS.gene063469.t1 |
| chr8.4 | CDS | 18284036 | 18284568 | 18284036 | ID=cds.MS.gene063469.t1;Parent=MS.gene063469.t1 |
| chr8.4 | exon | 18283242 | 18283556 | 18283242 | ID=MS.gene063469.t1.exon4;Parent=MS.gene063469.t1 |
| chr8.4 | CDS | 18283242 | 18283556 | 18283242 | ID=cds.MS.gene063469.t1;Parent=MS.gene063469.t1 |
| Gene Sequence |
| Protein sequence |
