AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene063539

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063539.t1 MTR_6g034220 94.393 428 24 0 1 428 1010 1437 0.0 839
MS.gene063539.t1 MTR_6g034220 26.804 194 128 2 236 428 638 818 2.18e-12 69.7
MS.gene063539.t1 MTR_6g034230 86.916 428 56 0 1 428 1011 1438 0.0 776
MS.gene063539.t1 MTR_6g034230 28.866 194 124 2 236 428 639 819 3.31e-13 72.4
MS.gene063539.t1 MTR_0019s0020 84.346 428 67 0 1 428 961 1388 0.0 759
MS.gene063539.t1 MTR_0019s0020 28.351 194 125 2 236 428 589 769 1.59e-12 70.1
MS.gene063539.t1 MTR_0019s0020 84.346 428 67 0 1 428 961 1388 0.0 758
MS.gene063539.t1 MTR_0019s0020 28.351 194 125 2 236 428 589 769 1.76e-12 70.1
MS.gene063539.t1 MTR_6g034270 87.150 428 55 0 1 428 828 1255 0.0 756
MS.gene063539.t1 MTR_6g034270 25.258 194 131 2 236 428 456 636 7.18e-11 65.1
MS.gene063539.t1 MTR_6g034310 84.112 428 68 0 1 428 636 1063 0.0 754
MS.gene063539.t1 MTR_6g034310 26.804 194 128 2 236 428 267 447 2.95e-11 66.2
MS.gene063539.t1 MTR_6g034310 84.112 428 68 0 1 428 994 1421 0.0 750
MS.gene063539.t1 MTR_6g034310 26.804 194 128 2 236 428 625 805 3.85e-11 65.9
MS.gene063539.t1 MTR_6g034265 83.411 428 71 0 1 428 1009 1436 0.0 750
MS.gene063539.t1 MTR_6g034265 27.320 194 127 2 236 428 637 817 1.02e-11 67.8
MS.gene063539.t1 MTR_8g042520 82.710 428 74 0 1 428 205 632 0.0 750
MS.gene063539.t1 MTR_1g099280 81.075 428 81 0 1 428 1012 1439 0.0 738
MS.gene063539.t1 MTR_1g099280 27.835 194 126 2 236 428 637 817 1.39e-12 70.5
MS.gene063539.t1 MTR_1g099280 81.075 428 81 0 1 428 1037 1464 0.0 737
MS.gene063539.t1 MTR_1g099280 27.835 194 126 2 236 428 662 842 1.58e-12 70.1
MS.gene063539.t1 MTR_0196s0020 83.411 428 71 0 1 428 1011 1438 0.0 722
MS.gene063539.t1 MTR_0196s0020 26.804 194 128 2 236 428 639 819 1.41e-11 67.4
MS.gene063539.t1 MTR_6g034335 76.168 428 101 1 1 428 1016 1442 0.0 700
MS.gene063539.t1 MTR_6g034335 28.502 207 133 3 223 428 631 823 5.83e-11 65.5
MS.gene063539.t1 MTR_6g034755 77.570 428 95 1 1 428 1019 1445 0.0 692
MS.gene063539.t1 MTR_6g034755 29.245 212 135 3 218 428 629 826 1.80e-13 73.2
MS.gene063539.t1 MTR_6g034350 75.935 428 102 1 1 428 1019 1445 0.0 683
MS.gene063539.t1 MTR_6g034350 27.979 193 125 2 236 427 646 825 1.16e-11 67.4
MS.gene063539.t1 MTR_6g034310 80.952 357 67 1 1 356 994 1350 0.0 601
MS.gene063539.t1 MTR_6g034310 26.804 194 128 2 236 428 625 805 3.63e-11 65.9
MS.gene063539.t1 MTR_0019s0020 82.317 328 58 0 1 328 961 1288 0.0 572
MS.gene063539.t1 MTR_0019s0020 28.351 194 125 2 236 428 589 769 1.31e-12 70.5
MS.gene063539.t1 MTR_8g015970 53.756 426 197 0 2 427 823 1248 2.92e-166 501
MS.gene063539.t1 MTR_8g015970 53.756 426 197 0 2 427 827 1252 3.04e-166 501
MS.gene063539.t1 MTR_8g015970 53.756 426 197 0 2 427 827 1252 4.97e-166 500
MS.gene063539.t1 MTR_8g015970 53.756 426 197 0 2 427 823 1248 5.30e-166 500
MS.gene063539.t1 MTR_8g040170 53.756 426 197 0 2 427 812 1237 5.12e-164 495
MS.gene063539.t1 MTR_8g040170 52.995 434 196 1 2 427 652 1085 2.43e-163 489
MS.gene063539.t1 MTR_8g015980 54.225 426 195 0 2 427 988 1413 3.52e-162 494
MS.gene063539.t1 MTR_8g016020 52.817 426 201 0 2 427 771 1196 1.03e-161 488
MS.gene063539.t1 MTR_8g040620 54.695 426 193 0 2 427 994 1419 1.57e-161 492
MS.gene063539.t1 MTR_1g099280 70.821 329 62 1 1 329 1012 1306 2.15e-160 486
MS.gene063539.t1 MTR_1g099280 27.835 194 126 2 236 428 637 817 9.45e-13 70.9
MS.gene063539.t1 MTR_1g069450 54.673 428 194 0 1 428 1066 1493 1.63e-158 485
MS.gene063539.t1 MTR_7g098690 54.206 428 196 0 1 428 1050 1477 1.71e-155 477
MS.gene063539.t1 MTR_8g016070 50.939 426 209 0 2 427 1003 1428 5.09e-154 472
MS.gene063539.t1 MTR_3g056645 50.463 432 204 2 2 428 218 644 7.00e-152 448
MS.gene063539.t1 MTR_8g061970 49.061 426 217 0 1 426 1040 1465 1.52e-148 458
MS.gene063539.t1 MTR_5g094810 52.804 428 199 3 2 427 1018 1444 3.81e-148 457
MS.gene063539.t1 MTR_3g056675 50.463 432 204 2 2 428 790 1216 6.84e-147 449
MS.gene063539.t1 MTR_5g094830 52.358 424 201 1 2 424 1033 1456 8.34e-147 454
MS.gene063539.t1 MTR_5g033320 51.756 427 205 1 2 427 1018 1444 2.77e-146 452
MS.gene063539.t1 MTR_8g016010 55.764 373 165 0 55 427 352 724 3.96e-146 434
MS.gene063539.t1 MTR_2g436710 47.430 428 225 0 1 428 1043 1470 3.66e-145 449
MS.gene063539.t1 MTR_5g033030 51.756 427 205 1 2 427 1028 1454 1.42e-144 447
MS.gene063539.t1 MTR_3g056700 49.180 427 217 0 2 428 843 1269 2.51e-142 438
MS.gene063539.t1 MTR_3g056705 50.117 427 213 0 2 428 1091 1517 8.71e-142 441
MS.gene063539.t1 MTR_2g436680 47.664 428 224 0 1 428 1040 1467 2.54e-141 439
MS.gene063539.t1 MTR_6g084320 52.113 426 187 2 2 427 977 1385 1.44e-138 431
MS.gene063539.t1 MTR_2g436730 48.826 426 217 1 1 426 1042 1466 1.70e-138 431
MS.gene063539.t1 MTR_2g436730 25.246 305 199 6 135 428 551 837 6.26e-12 68.2
MS.gene063539.t1 MTR_8g080050 48.478 427 220 0 2 428 981 1407 9.48e-138 429
MS.gene063539.t1 MTR_8g009640 52.533 375 178 0 54 428 430 804 1.72e-132 402
MS.gene063539.t1 MTR_1g088680 47.765 425 222 0 2 426 1056 1480 4.93e-130 409
MS.gene063539.t1 MTR_1g088680 23.547 327 217 8 117 428 540 848 1.49e-12 70.5
MS.gene063539.t1 MTR_0874s0020 55.215 326 146 0 103 428 4 329 4.15e-124 365
MS.gene063539.t1 MTR_2g019020 40.698 430 245 6 2 424 561 987 2.02e-97 316
MS.gene063539.t1 MTR_3g011820 39.344 427 255 2 2 424 1052 1478 9.24e-97 318
MS.gene063539.t1 MTR_3g011840 40.099 404 238 2 25 424 958 1361 1.04e-96 317
MS.gene063539.t1 MTR_2g019020 40.698 430 245 6 2 424 779 1205 1.71e-96 315
MS.gene063539.t1 MTR_2g019020 40.698 430 245 6 2 424 833 1259 3.20e-96 315
MS.gene063539.t1 MTR_2g019020 40.698 430 245 6 2 424 1016 1442 5.91e-96 315
MS.gene063539.t1 MTR_2g019020 40.698 430 245 6 2 424 1016 1442 9.19e-96 315
MS.gene063539.t1 MTR_5g094820 63.547 203 74 0 224 426 894 1096 6.51e-85 281
MS.gene063539.t1 MTR_2g105190 37.500 432 256 5 1 424 1021 1446 7.65e-83 278
MS.gene063539.t1 MTR_0019s0020 77.273 154 35 0 1 154 961 1114 1.39e-71 244
MS.gene063539.t1 MTR_0019s0020 28.351 194 125 2 236 428 589 769 1.30e-12 70.5
MS.gene063539.t1 MTR_8g075940 50.855 234 84 4 187 419 66 269 1.21e-67 216
MS.gene063539.t1 MTR_2g105190 32.919 322 203 4 1 314 1015 1331 2.15e-47 175
MS.gene063539.t1 MTR_1008s0010 64.000 100 36 0 329 428 2 101 1.93e-37 133
MS.gene063539.t1 MTR_6g009110 32.500 240 148 6 190 423 995 1226 1.18e-35 140
MS.gene063539.t1 MTR_6g009110 25.566 442 301 13 1 428 152 579 4.57e-29 120
MS.gene063539.t1 MTR_7g051100 33.803 213 134 3 217 423 993 1204 2.82e-35 139
MS.gene063539.t1 MTR_7g051100 32.093 215 142 3 217 428 355 568 5.66e-32 129
MS.gene063539.t1 MTR_6g009080 32.083 240 149 6 190 423 190 421 1.87e-34 134
MS.gene063539.t1 MTR_6g009150 33.333 213 134 4 217 423 1015 1225 2.88e-34 136
MS.gene063539.t1 MTR_6g009150 30.660 212 139 4 217 423 360 568 7.64e-27 114
MS.gene063539.t1 MTR_6g008820 26.328 433 271 15 20 426 481 891 4.78e-34 135
MS.gene063539.t1 MTR_6g008820 29.767 215 147 3 217 428 25 238 1.55e-27 116
MS.gene063539.t1 MTR_6g008820 26.328 433 271 15 20 426 673 1083 5.19e-34 135
MS.gene063539.t1 MTR_6g008820 24.823 423 280 13 25 428 27 430 2.01e-28 119
MS.gene063539.t1 MTR_6g008820 26.328 433 271 15 20 426 589 999 5.40e-34 135
MS.gene063539.t1 MTR_6g008820 30.270 185 128 1 245 428 162 346 6.73e-26 111
MS.gene063539.t1 MTR_6g008820 26.328 433 271 15 20 426 803 1213 5.77e-34 135
MS.gene063539.t1 MTR_6g008820 24.823 423 280 13 25 428 157 560 1.98e-28 119
MS.gene063539.t1 MTR_2g018320 25.845 414 282 12 26 426 167 568 6.45e-34 135
MS.gene063539.t1 MTR_2g018320 32.258 217 142 3 216 428 1011 1226 4.45e-30 124
MS.gene063539.t1 MTR_6g008800 32.083 240 149 6 190 423 984 1215 7.29e-34 135
MS.gene063539.t1 MTR_6g008800 26.829 451 284 18 1 428 145 572 2.64e-29 121
MS.gene063539.t1 MTR_1g059830 34.466 206 132 1 216 418 377 582 7.41e-34 134
MS.gene063539.t1 MTR_4g081190 33.953 215 138 3 217 428 988 1201 9.66e-34 134
MS.gene063539.t1 MTR_4g081190 32.381 210 138 3 217 423 341 549 3.82e-29 120
MS.gene063539.t1 MTR_6g009200 31.250 240 151 5 190 423 997 1228 1.02e-33 134
MS.gene063539.t1 MTR_6g009200 29.767 215 147 3 217 428 359 572 7.23e-28 117
MS.gene063539.t1 MTR_6g009030 32.864 213 135 4 217 423 997 1207 2.33e-33 133
MS.gene063539.t1 MTR_6g009030 30.233 215 146 3 217 428 359 572 1.70e-28 119
MS.gene063539.t1 MTR_3g086430 33.953 215 138 3 217 428 999 1212 2.70e-33 133
MS.gene063539.t1 MTR_3g086430 25.182 413 285 9 26 426 154 554 1.01e-22 101
MS.gene063539.t1 MTR_6g009070 31.381 239 152 5 190 423 911 1142 9.87e-33 131
MS.gene063539.t1 MTR_6g009070 29.817 218 145 4 216 428 298 512 5.44e-28 117
MS.gene063539.t1 MTR_5g075955 27.869 366 235 9 68 428 222 563 1.00e-32 130
MS.gene063539.t1 MTR_2g018530 31.455 213 142 3 217 426 367 578 1.55e-32 131
MS.gene063539.t1 MTR_2g018530 31.019 216 144 3 217 428 1023 1237 1.08e-29 122
MS.gene063539.t1 MTR_5g075955 33.036 224 145 4 207 428 455 675 2.39e-32 130
MS.gene063539.t1 MTR_4g124040 31.925 213 141 3 217 426 371 582 2.98e-32 130
MS.gene063539.t1 MTR_4g124040 30.415 217 144 4 217 428 1032 1246 7.65e-27 114
MS.gene063539.t1 MTR_4g124040 31.925 213 141 3 217 426 194 405 3.06e-32 130
MS.gene063539.t1 MTR_4g124040 30.415 217 144 4 217 428 855 1069 7.23e-27 114
MS.gene063539.t1 MTR_4g124040 31.925 213 141 3 217 426 426 637 3.38e-32 130
MS.gene063539.t1 MTR_4g124040 30.415 217 144 4 217 428 1087 1301 8.12e-27 114
MS.gene063539.t1 MTR_6g078080 24.826 431 265 14 26 426 173 574 3.48e-32 130
MS.gene063539.t1 MTR_6g078080 31.944 216 142 3 217 428 1019 1233 1.24e-30 125
MS.gene063539.t1 MTR_3g093430 25.701 428 268 15 26 428 173 575 4.17e-32 129
MS.gene063539.t1 MTR_3g093430 33.032 221 136 4 217 426 995 1214 2.09e-29 122
MS.gene063539.t1 MTR_4g124050 32.719 217 139 4 217 428 1048 1262 5.14e-32 129
MS.gene063539.t1 MTR_4g124050 31.628 215 143 3 217 428 394 607 1.06e-30 125
MS.gene063539.t1 MTR_1g086150 27.200 375 247 10 66 426 231 593 5.24e-32 129
MS.gene063539.t1 MTR_1g086150 31.944 216 142 3 217 428 1037 1251 5.63e-30 123
MS.gene063539.t1 MTR_2g018350 31.455 213 142 3 217 426 357 568 7.44e-32 129
MS.gene063539.t1 MTR_2g018350 31.019 216 144 3 217 428 1014 1228 8.77e-29 120
MS.gene063539.t1 MTR_4g123990 32.864 213 139 3 217 426 376 587 1.52e-31 128
MS.gene063539.t1 MTR_4g123990 29.749 279 165 7 163 428 988 1248 1.11e-28 119
MS.gene063539.t1 MTR_5g029750 33.023 215 140 3 217 428 987 1200 2.11e-31 127
MS.gene063539.t1 MTR_5g029750 30.698 215 141 4 217 426 354 565 1.27e-24 107
MS.gene063539.t1 MTR_3g080220 32.394 213 140 3 217 426 393 604 3.23e-31 127
MS.gene063539.t1 MTR_3g080220 32.258 217 140 4 217 428 1051 1265 4.07e-29 120
MS.gene063539.t1 MTR_1g086080 31.455 213 142 3 217 426 387 598 6.41e-31 126
MS.gene063539.t1 MTR_1g086080 31.019 216 144 3 217 428 1042 1256 1.98e-29 122
MS.gene063539.t1 MTR_7g102070 34.112 214 137 3 216 426 423 635 6.43e-31 126
MS.gene063539.t1 MTR_7g102070 31.163 215 144 3 217 428 1079 1292 1.26e-29 122
MS.gene063539.t1 MTR_4g124050 31.628 215 143 3 217 428 394 607 7.34e-31 126
MS.gene063539.t1 MTR_4g124000 32.394 213 140 3 217 426 376 587 1.27e-30 125
MS.gene063539.t1 MTR_4g124000 32.394 213 140 3 217 426 376 587 1.28e-30 125
MS.gene063539.t1 MTR_4g124000 30.876 217 143 4 217 428 1034 1248 1.12e-29 122
MS.gene063539.t1 MTR_4g077930 32.394 213 140 3 217 426 374 585 1.47e-30 125
MS.gene063539.t1 MTR_4g077930 32.394 213 140 3 217 426 265 476 1.61e-30 125
MS.gene063539.t1 MTR_4g077930 31.797 217 141 4 217 428 923 1137 6.40e-30 123
MS.gene063539.t1 MTR_4g077930 32.394 213 140 3 217 426 374 585 2.08e-30 124
MS.gene063539.t1 MTR_4g077930 29.856 278 179 7 156 428 980 1246 8.26e-30 123
MS.gene063539.t1 MTR_1g063170 33.175 211 137 3 216 423 396 605 2.72e-30 124
MS.gene063539.t1 MTR_1g063170 31.163 215 144 3 217 428 1053 1266 1.96e-29 122
MS.gene063539.t1 MTR_4g109720 26.108 406 273 12 37 428 207 599 4.68e-30 123
MS.gene063539.t1 MTR_1309s0010 33.197 244 155 4 188 427 395 634 6.38e-30 122
MS.gene063539.t1 MTR_1g025560 32.857 210 137 3 217 423 992 1200 7.45e-30 123
MS.gene063539.t1 MTR_1g025560 30.698 215 144 2 217 428 371 583 1.75e-24 107
MS.gene063539.t1 MTR_1g086095 31.944 216 142 3 217 428 254 468 9.01e-30 120
MS.gene063539.t1 MTR_3g107800 30.841 214 144 3 216 426 393 605 9.84e-30 122
MS.gene063539.t1 MTR_3g107800 31.797 217 141 4 217 428 1024 1238 7.74e-29 120
MS.gene063539.t1 MTR_5g075960 27.848 395 253 13 48 428 301 677 1.61e-28 119
MS.gene063539.t1 MTR_6g011680 31.455 213 142 3 217 426 361 572 5.70e-28 117
MS.gene063539.t1 MTR_6g011680 31.579 209 137 4 217 420 1006 1213 2.27e-26 112
MS.gene063539.t1 MTR_6g465300 24.449 454 280 14 29 428 240 684 2.34e-26 112
MS.gene063539.t1 MTR_6g465300 24.449 454 280 14 29 428 240 684 2.60e-26 112
MS.gene063539.t1 MTR_6g088670 29.577 213 146 3 214 423 997 1208 3.27e-26 112
MS.gene063539.t1 MTR_6g088670 28.372 215 152 2 216 428 356 570 1.51e-24 107
MS.gene063539.t1 MTR_6g009090 30.288 208 137 3 217 421 378 580 5.04e-26 110
MS.gene063539.t1 MTR_8g022270 29.767 215 143 4 217 426 596 807 1.50e-24 107
MS.gene063539.t1 MTR_8g022270 28.302 212 142 4 218 423 1241 1448 9.73e-24 104
MS.gene063539.t1 MTR_7g033710 29.680 219 144 5 217 428 423 638 2.12e-24 106
MS.gene063539.t1 MTR_8g066710 30.698 215 145 3 217 428 512 725 2.42e-23 103
MS.gene063539.t1 MTR_5g033080 23.866 419 280 12 29 426 93 493 1.44e-22 100
MS.gene063539.t1 MTR_5g033080 23.866 419 280 12 29 426 268 668 1.44e-22 100
MS.gene063539.t1 MTR_6g084320 50.515 97 48 0 2 98 977 1073 2.21e-21 97.4
MS.gene063539.t1 MTR_8g107410 35.955 178 94 5 218 387 18 183 6.28e-21 92.0
MS.gene063539.t1 MTR_1g115430 27.103 214 153 2 217 428 397 609 1.68e-20 95.1
MS.gene063539.t1 MTR_1g115430 31.280 211 135 6 208 413 1138 1343 3.75e-20 94.0
MS.gene063539.t1 MTR_7g023340 30.332 211 137 6 208 413 1111 1316 1.81e-20 94.7
MS.gene063539.t1 MTR_7g023340 28.000 200 143 1 229 428 418 616 4.93e-20 93.6
MS.gene063539.t1 MTR_7g023340 30.332 211 137 6 208 413 1147 1352 1.82e-20 94.7
MS.gene063539.t1 MTR_7g023340 28.000 200 143 1 229 428 418 616 5.29e-20 93.6
MS.gene063539.t1 MTR_5g075955 27.148 291 183 9 68 353 334 600 6.62e-18 86.7
MS.gene063539.t1 MTR_0019s0020 70.909 55 16 0 1 55 961 1015 3.17e-16 81.6
MS.gene063539.t1 MTR_0019s0020 28.351 194 125 2 236 428 589 769 1.41e-12 70.1
MS.gene063539.t1 MTR_5g075960 28.417 278 170 11 49 314 302 562 7.82e-16 80.1
MS.gene063539.t1 MTR_1g059830 37.931 87 54 0 216 302 377 463 4.45e-12 68.2
MS.gene063539.t1 MTR_8g066690 29.927 137 92 3 217 350 350 485 4.56e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063539.t1 AT3G59140 75.935 428 103 0 1 428 989 1416 0.0 701
MS.gene063539.t1 AT3G21250 53.756 426 197 0 2 427 582 1007 7.53e-163 486
MS.gene063539.t1 AT3G21250 53.756 426 197 0 2 427 582 1007 7.53e-163 486
MS.gene063539.t1 AT3G21250 53.756 426 197 0 2 427 993 1418 5.45e-159 485
MS.gene063539.t1 AT3G21250 53.756 426 197 0 2 427 987 1412 5.86e-159 485
MS.gene063539.t1 AT3G21250 53.756 426 197 0 2 427 1004 1429 6.05e-159 486
MS.gene063539.t1 AT3G21250 53.756 426 197 0 2 427 998 1423 7.10e-159 485
MS.gene063539.t1 AT1G04120 54.206 428 196 0 1 428 1015 1442 2.06e-154 474
MS.gene063539.t1 AT1G04120 54.206 428 196 0 1 428 1050 1477 3.42e-154 474
MS.gene063539.t1 AT1G04120 53.505 428 194 1 1 428 1050 1472 2.44e-149 461
MS.gene063539.t1 AT3G60160 49.883 427 214 0 2 428 1002 1428 2.31e-145 449
MS.gene063539.t1 AT3G60970 49.180 427 217 0 2 428 585 1011 3.07e-145 440
MS.gene063539.t1 AT3G60970 22.186 311 198 7 132 428 132 412 5.41e-12 68.6
MS.gene063539.t1 AT3G60160 49.883 427 214 0 2 428 1038 1464 4.21e-145 449
MS.gene063539.t1 AT3G13080 50.351 427 212 0 2 428 1052 1478 4.63e-145 449
MS.gene063539.t1 AT3G13080 50.351 427 212 0 2 428 1052 1478 7.26e-145 449
MS.gene063539.t1 AT3G62700 51.059 425 208 0 2 426 1080 1504 1.76e-141 440
MS.gene063539.t1 AT3G62700 25.776 322 202 10 123 428 537 837 8.33e-15 77.4
MS.gene063539.t1 AT2G47800 51.529 425 206 0 2 426 1057 1481 2.95e-140 436
MS.gene063539.t1 AT2G47800 25.157 318 209 7 123 428 539 839 3.51e-14 75.5
MS.gene063539.t1 AT3G13090 49.409 423 214 0 2 424 1002 1424 1.55e-137 428
MS.gene063539.t1 AT3G13100 47.991 423 220 0 2 424 779 1201 1.01e-136 422
MS.gene063539.t1 AT3G13100 47.991 423 220 0 2 424 1024 1446 3.53e-135 422
MS.gene063539.t1 AT3G13080 46.370 427 204 1 2 428 1052 1453 2.67e-125 396
MS.gene063539.t1 AT3G60160 47.095 327 173 0 2 328 1038 1364 4.00e-99 323
MS.gene063539.t1 AT1G30400 40.326 429 252 2 2 426 1016 1444 3.49e-97 319
MS.gene063539.t1 AT1G30400 22.512 422 278 16 20 428 428 813 1.99e-11 67.0
MS.gene063539.t1 AT1G30400 40.326 429 252 2 2 426 1016 1444 3.49e-97 319
MS.gene063539.t1 AT1G30400 22.512 422 278 16 20 428 428 813 1.99e-11 67.0
MS.gene063539.t1 AT1G30410 38.605 430 260 2 2 427 899 1328 3.47e-94 309
MS.gene063539.t1 AT1G30410 38.605 430 260 2 2 427 1014 1443 7.47e-94 309
MS.gene063539.t1 AT1G30410 38.605 430 260 2 2 427 1014 1443 7.47e-94 309
MS.gene063539.t1 AT1G30410 38.605 430 260 2 2 427 1014 1443 7.47e-94 309
MS.gene063539.t1 AT1G30410 38.605 430 260 2 2 427 1017 1446 8.25e-94 309
MS.gene063539.t1 AT2G34660 38.372 430 259 2 2 426 734 1162 6.00e-93 305
MS.gene063539.t1 AT2G34660 38.372 430 259 2 2 426 1021 1449 2.80e-92 305
MS.gene063539.t1 AT2G34660 38.372 430 259 2 2 426 1021 1449 2.80e-92 305
MS.gene063539.t1 AT1G30420 38.051 431 261 3 2 427 1014 1443 8.57e-91 300
MS.gene063539.t1 AT2G07680 37.788 434 250 8 2 424 945 1369 1.07e-79 268
MS.gene063539.t1 AT2G07680 37.788 434 250 8 2 424 970 1394 1.07e-79 268
MS.gene063539.t1 AT2G07680 37.788 434 250 8 2 424 948 1372 1.11e-79 268
MS.gene063539.t1 AT2G07680 37.788 434 250 8 2 424 954 1378 1.21e-79 268
MS.gene063539.t1 AT2G07680 37.788 434 250 8 2 424 871 1295 1.30e-79 268
MS.gene063539.t1 AT1G30410 34.375 352 227 2 2 349 1014 1365 1.44e-67 233
MS.gene063539.t1 AT4G28620 28.863 343 235 7 89 426 308 646 2.03e-34 136
MS.gene063539.t1 AT5G46540 34.742 213 135 3 217 426 355 566 2.91e-34 136
MS.gene063539.t1 AT5G46540 31.944 216 142 3 217 428 1003 1217 7.35e-32 129
MS.gene063539.t1 AT4G28630 27.123 424 285 11 12 426 236 644 4.02e-34 135
MS.gene063539.t1 AT4G18050 33.333 213 138 3 217 426 353 564 2.57e-33 133
MS.gene063539.t1 AT4G18050 31.481 216 143 3 217 428 991 1205 4.08e-31 127
MS.gene063539.t1 AT4G18050 33.333 213 138 3 217 426 363 574 2.88e-33 133
MS.gene063539.t1 AT4G18050 31.481 216 143 3 217 428 1001 1215 4.37e-31 127
MS.gene063539.t1 AT2G47000 33.023 215 136 4 217 426 382 593 6.62e-33 132
MS.gene063539.t1 AT2G47000 33.023 215 136 4 217 426 382 593 7.44e-33 132
MS.gene063539.t1 AT2G47000 38.000 100 59 2 217 314 1040 1138 1.91e-14 76.3
MS.gene063539.t1 AT2G47000 33.023 215 136 4 217 426 382 593 7.81e-33 132
MS.gene063539.t1 AT2G47000 33.023 215 136 4 217 426 382 593 7.81e-33 132
MS.gene063539.t1 AT3G28380 26.950 423 258 12 31 426 808 1206 8.32e-33 132
MS.gene063539.t1 AT3G28380 30.698 215 145 3 217 428 357 570 5.24e-27 114
MS.gene063539.t1 AT2G47000 33.023 215 136 4 217 426 382 593 8.43e-33 132
MS.gene063539.t1 AT2G47000 30.802 237 155 5 197 428 1022 1254 4.63e-31 127
MS.gene063539.t1 AT2G47000 33.023 215 136 4 217 426 382 593 8.43e-33 132
MS.gene063539.t1 AT2G47000 30.802 237 155 5 197 428 1022 1254 4.63e-31 127
MS.gene063539.t1 AT2G47000 33.023 215 136 4 217 426 382 593 8.43e-33 132
MS.gene063539.t1 AT2G47000 30.802 237 155 5 197 428 1022 1254 4.63e-31 127
MS.gene063539.t1 AT3G62150 31.925 213 141 3 217 426 401 612 3.48e-32 130
MS.gene063539.t1 AT3G62150 30.876 217 143 4 217 428 1050 1264 6.25e-31 126
MS.gene063539.t1 AT3G62150 31.925 213 141 3 217 426 401 612 3.48e-32 130
MS.gene063539.t1 AT3G62150 30.876 217 143 4 217 428 1050 1264 6.25e-31 126
MS.gene063539.t1 AT3G62150 31.925 213 141 3 217 426 401 612 3.48e-32 130
MS.gene063539.t1 AT3G62150 30.876 217 143 4 217 428 1050 1264 6.25e-31 126
MS.gene063539.t1 AT5G03910 37.559 213 130 2 217 426 394 606 3.58e-32 129
MS.gene063539.t1 AT5G58270 33.178 214 139 3 217 428 477 688 3.78e-32 129
MS.gene063539.t1 AT1G02530 32.864 213 139 3 217 426 366 577 6.87e-32 129
MS.gene063539.t1 AT1G02530 31.507 219 141 5 217 428 1025 1241 6.19e-30 123
MS.gene063539.t1 AT1G02530 32.864 213 139 3 217 426 366 577 7.10e-32 129
MS.gene063539.t1 AT1G02520 32.394 213 140 3 217 426 379 590 2.04e-31 127
MS.gene063539.t1 AT1G02520 31.963 219 140 5 217 428 1030 1246 2.74e-30 124
MS.gene063539.t1 AT1G02520 32.394 213 140 3 217 426 379 590 2.04e-31 127
MS.gene063539.t1 AT1G02520 31.963 219 140 5 217 428 1030 1246 2.74e-30 124
MS.gene063539.t1 AT1G02520 32.394 213 140 3 217 426 379 590 2.04e-31 127
MS.gene063539.t1 AT1G02520 31.963 219 140 5 217 428 1030 1246 2.74e-30 124
MS.gene063539.t1 AT1G27940 31.776 214 143 2 217 428 156 368 8.18e-31 125
MS.gene063539.t1 AT1G27940 31.905 210 139 3 217 423 788 996 1.06e-30 125
MS.gene063539.t1 AT1G27940 30.516 213 147 1 217 428 370 582 8.93e-31 125
MS.gene063539.t1 AT1G27940 31.905 210 139 3 217 423 1002 1210 1.20e-30 125
MS.gene063539.t1 AT3G28345 33.891 239 146 5 190 423 972 1203 1.79e-30 125
MS.gene063539.t1 AT3G28345 28.972 214 150 2 217 428 357 570 4.55e-25 108
MS.gene063539.t1 AT1G28010 31.776 214 143 2 217 428 371 583 2.67e-30 124
MS.gene063539.t1 AT1G28010 31.925 213 141 3 217 426 1004 1215 1.11e-27 116
MS.gene063539.t1 AT3G28415 30.962 239 153 5 190 423 953 1184 4.29e-30 124
MS.gene063539.t1 AT3G28415 30.000 210 143 3 217 423 336 544 7.16e-26 111
MS.gene063539.t1 AT3G28415 30.962 239 153 5 190 423 961 1192 4.94e-30 124
MS.gene063539.t1 AT3G28415 30.000 210 143 3 217 423 344 552 7.79e-26 111
MS.gene063539.t1 AT1G10680 32.093 215 142 3 217 428 980 1193 8.52e-30 123
MS.gene063539.t1 AT1G10680 27.114 402 264 12 38 426 185 570 3.96e-29 121
MS.gene063539.t1 AT4G01830 29.954 217 146 3 217 428 749 964 1.36e-29 122
MS.gene063539.t1 AT4G01830 30.516 213 144 3 217 426 117 328 6.13e-28 117
MS.gene063539.t1 AT2G36910 33.175 211 137 3 216 423 365 574 1.38e-29 122
MS.gene063539.t1 AT2G36910 32.093 215 142 3 217 428 1022 1235 3.70e-29 121
MS.gene063539.t1 AT4G01830 29.954 217 146 3 217 428 983 1198 1.47e-29 122
MS.gene063539.t1 AT4G01830 30.516 213 144 3 217 426 351 562 6.27e-28 117
MS.gene063539.t1 AT4G25960 32.381 210 138 3 217 423 1028 1236 2.12e-29 122
MS.gene063539.t1 AT4G25960 32.258 217 139 4 217 428 399 612 1.16e-27 116
MS.gene063539.t1 AT1G10680 27.114 402 264 12 38 426 185 570 3.24e-29 121
MS.gene063539.t1 AT1G10680 31.746 189 125 3 217 402 980 1167 4.16e-23 102
MS.gene063539.t1 AT3G28390 25.362 414 272 12 35 428 797 1193 4.94e-29 120
MS.gene063539.t1 AT3G28390 29.767 215 147 3 217 428 345 558 3.02e-26 112
MS.gene063539.t1 AT4G01820 30.047 213 145 3 217 426 346 557 1.78e-28 119
MS.gene063539.t1 AT4G01820 30.047 213 145 3 217 426 346 557 2.40e-28 118
MS.gene063539.t1 AT4G01820 29.358 218 146 4 217 428 982 1197 4.41e-25 108
MS.gene063539.t1 AT3G28860 32.093 215 138 4 217 426 363 574 3.46e-28 118
MS.gene063539.t1 AT3G28860 30.275 218 142 4 217 428 1008 1221 5.26e-27 114
MS.gene063539.t1 AT5G39040 31.878 229 146 5 206 428 384 608 7.64e-28 116
MS.gene063539.t1 AT1G70610 25.701 428 259 13 30 426 87 486 1.22e-27 115
MS.gene063539.t1 AT3G28360 24.265 408 274 9 35 423 798 1189 2.71e-27 115
MS.gene063539.t1 AT3G28360 30.233 215 146 3 217 428 344 557 9.41e-27 114
MS.gene063539.t1 AT1G70610 25.701 428 259 13 30 426 268 667 3.58e-27 114
MS.gene063539.t1 AT4G25450 31.718 227 147 4 207 428 291 514 2.11e-25 108
MS.gene063539.t1 AT4G25450 23.697 422 265 9 58 428 268 683 4.41e-25 108
MS.gene063539.t1 AT1G67940 32.889 225 119 8 203 417 21 223 9.78e-23 97.4
MS.gene063539.t1 AT2G39480 28.037 214 151 2 217 428 230 442 3.04e-22 100
MS.gene063539.t1 AT2G39480 29.167 216 146 5 217 427 976 1189 9.30e-21 95.9
MS.gene063539.t1 AT2G39480 28.037 214 151 2 217 428 410 622 3.38e-22 100
MS.gene063539.t1 AT2G39480 29.167 216 146 5 217 427 1156 1369 9.69e-21 95.9
MS.gene063539.t1 AT3G55320 28.037 214 151 2 217 428 412 624 1.95e-21 97.8
MS.gene063539.t1 AT3G55320 29.384 211 139 6 208 413 1151 1356 1.46e-18 89.0
MS.gene063539.t1 AT2G07680 29.703 202 125 6 2 192 970 1165 5.07e-13 71.6
MS.gene063539.t1 AT5G39040 33.333 111 70 3 206 314 384 492 1.33e-11 66.6

Find 0 sgRNAs with CRISPR-Local

Find 133 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGAATTGCAAATATTA+AGG + 42386:2931-2950 MS.gene063539:intergenic 15.0%
!!! TTATTCTAATCTTATAGTTT+TGG - 42386:2251-2270 MS.gene063539:CDS 15.0%
!! ATATATACATATACAAAGTG+AGG - 42386:2998-3017 MS.gene063539:intron 20.0%
!! CATTATTATCAATTAGATCA+AGG + 42386:2594-2613 MS.gene063539:intergenic 20.0%
!! TTAACTAGTTAATACTAACT+TGG + 42386:3693-3712 MS.gene063539:intergenic 20.0%
!! TTGTCATTCTTTATTAAGAA+AGG - 42386:2392-2411 MS.gene063539:CDS 20.0%
!! TTTATTAAGAAAGGAATGTA+AGG - 42386:2401-2420 MS.gene063539:intron 20.0%
! AAAGAACTAATGAGGTTAAA+TGG - 42386:2469-2488 MS.gene063539:intron 25.0%
! ATTTCCTTCTACAATTTCTT+CGG + 42386:3024-3043 MS.gene063539:intergenic 25.0%
! CTAATTCTTGACTAATATGA+AGG - 42386:3549-3568 MS.gene063539:CDS 25.0%
! GAGAAATTCAAATACTTTAG+AGG + 42386:2803-2822 MS.gene063539:intergenic 25.0%
! TATATGACTTGAAGGTAATT+AGG - 42386:3084-3103 MS.gene063539:CDS 25.0%
AAGAAGTAGGATATTGGTAT+TGG - 42386:3796-3815 MS.gene063539:intron 30.0%
ACATAATGTTCAGAAAACGT+AGG - 42386:3128-3147 MS.gene063539:CDS 30.0%
AGTCGAAATATATGACTTGA+AGG - 42386:3076-3095 MS.gene063539:CDS 30.0%
ATCTTACTGTCCCATTAAAA+AGG + 42386:3433-3452 MS.gene063539:intergenic 30.0%
CTAGCAGTATAATTTCAAGA+TGG + 42386:2355-2374 MS.gene063539:intergenic 30.0%
CTCATCTGATCTTAGTATTA+TGG - 42386:2176-2195 MS.gene063539:CDS 30.0%
TACTGTGATTACTGTACAAT+CGG + 42386:3891-3910 MS.gene063539:intergenic 30.0%
TCTTACTGTCCCATTAAAAA+GGG + 42386:3432-3451 MS.gene063539:intergenic 30.0%
TGACTAATATGAAGGTTCTT+GGG - 42386:3557-3576 MS.gene063539:CDS 30.0%
TTGACTAATATGAAGGTTCT+TGG - 42386:3556-3575 MS.gene063539:CDS 30.0%
TTTGAGAAGAAGTAGGATAT+TGG - 42386:3790-3809 MS.gene063539:intron 30.0%
! AAGATCCTACCCTTTTTAAT+GGG - 42386:3420-3439 MS.gene063539:CDS 30.0%
! TTTTGCTTTGCATGAAAATG+CGG - 42386:3525-3544 MS.gene063539:CDS 30.0%
AAATTGTTACGCAGTTGTTG+AGG - 42386:3712-3731 MS.gene063539:intron 35.0%
AACACAGTGATCAAGAGATA+TGG - 42386:3474-3493 MS.gene063539:CDS 35.0%
ACACAGTGATCAAGAGATAT+GGG - 42386:3475-3494 MS.gene063539:CDS 35.0%
ACAGCAAAACTGAGGATAAA+TGG + 42386:2213-2232 MS.gene063539:intergenic 35.0%
ACTTATGGCCTATCACTAAA+CGG - 42386:2903-2922 MS.gene063539:CDS 35.0%
ATATTGCAATCCATCACAGT+TGG + 42386:3926-3945 MS.gene063539:intergenic 35.0%
ATGGTTCTTGCAATAAGTGA+TGG - 42386:3944-3963 MS.gene063539:CDS 35.0%
ATTTCAACATCCTTCATTCC+AGG - 42386:2861-2880 MS.gene063539:CDS 35.0%
CAATGGTTTATGTTGCGTTT+CGG - 42386:2310-2329 MS.gene063539:CDS 35.0%
CTTGATTATGGCTATACCAA+TGG - 42386:2293-2312 MS.gene063539:CDS 35.0%
GATCACTGTGTTGAGATAAA+GGG + 42386:3466-3485 MS.gene063539:intergenic 35.0%
GGAGGAAAAGTTATAGTTGA+TGG - 42386:3338-3357 MS.gene063539:intron 35.0%
GTCATATATTTCGACTTTGC+CGG + 42386:3072-3091 MS.gene063539:intergenic 35.0%
TCCTTCATTCCAGGAATTAT+TGG - 42386:2870-2889 MS.gene063539:CDS 35.0%
TGATCACTGTGTTGAGATAA+AGG + 42386:3467-3486 MS.gene063539:intergenic 35.0%
TGGGACAGTAAGATTTAACT+TGG - 42386:3439-3458 MS.gene063539:CDS 35.0%
TTAAAAAGGGTAGGATCTTG+AGG + 42386:3419-3438 MS.gene063539:intergenic 35.0%
! AAATAATGCACCGATAAGAG+TGG + 42386:3300-3319 MS.gene063539:intergenic 35.0%
! ATTTATCCTCAGTTTTGCTG+TGG - 42386:2212-2231 MS.gene063539:CDS 35.0%
! CAAGATCCTACCCTTTTTAA+TGG - 42386:3419-3438 MS.gene063539:CDS 35.0%
! GTAACAATAAGGGCTTTTGA+GGG - 42386:2544-2563 MS.gene063539:CDS 35.0%
! TAACAATAAGGGCTTTTGAG+GGG - 42386:2545-2564 MS.gene063539:CDS 35.0%
! TGTAACAATAAGGGCTTTTG+AGG - 42386:2543-2562 MS.gene063539:CDS 35.0%
!! AACTGTGATGGATTGCAATA+TGG - 42386:3925-3944 MS.gene063539:CDS 35.0%
!! ATAGTTTTGCCTCAAACGAA+TGG - 42386:2629-2648 MS.gene063539:intron 35.0%
AACGTGACCTCAAATCATGA+AGG + 42386:3385-3404 MS.gene063539:intergenic 40.0%
ACAACGGCAGTTATTCTGTT+TGG - 42386:3757-3776 MS.gene063539:intron 40.0%
ACACAGAATACCAACTGTGA+TGG - 42386:3913-3932 MS.gene063539:CDS 40.0%
ACTGTCCCATTAAAAAGGGT+AGG + 42386:3428-3447 MS.gene063539:intergenic 40.0%
AGTTGTCCAAGAGAAAGAAG+AGG - 42386:3597-3616 MS.gene063539:CDS 40.0%
ATGGACCACTTATACTTCAC+GGG - 42386:3210-3229 MS.gene063539:CDS 40.0%
ATTGGTATTGTTGGCAGAAC+AGG - 42386:3263-3282 MS.gene063539:intron 40.0%
ATTTCGACTTTGCCGGTAAA+TGG + 42386:3065-3084 MS.gene063539:intergenic 40.0%
CAAACGAATGGTTGATCCAA+CGG - 42386:2641-2660 MS.gene063539:CDS 40.0%
CAACGGCAGTTATTCTGTTT+GGG - 42386:3758-3777 MS.gene063539:intron 40.0%
CACATGGCAAGTCTTGATTA+TGG - 42386:2281-2300 MS.gene063539:CDS 40.0%
CATTCCAGGAATTATTGGCA+TGG - 42386:2875-2894 MS.gene063539:CDS 40.0%
CCTCAGCAAAAGAACTAATG+AGG - 42386:2461-2480 MS.gene063539:intron 40.0%
CCTTTGAATTGGCCATTTAC+CGG - 42386:3050-3069 MS.gene063539:CDS 40.0%
CGAAACGCAACATAAACCAT+TGG + 42386:2312-2331 MS.gene063539:intergenic 40.0%
CTAAACCCTCTTCTTTCTCT+TGG + 42386:3606-3625 MS.gene063539:intergenic 40.0%
CTTGAAAATGTATGTACCCG+AGG + 42386:3632-3651 MS.gene063539:intergenic 40.0%
GAAATCGTCCTCCTTTGAAT+TGG - 42386:3039-3058 MS.gene063539:intron 40.0%
GATGGACCACTTATACTTCA+CGG - 42386:3209-3228 MS.gene063539:CDS 40.0%
GCCAATAATTCCTGGAATGA+AGG + 42386:2874-2893 MS.gene063539:intergenic 40.0%
GGCATAGACATCTCATCTAT+CGG - 42386:3359-3378 MS.gene063539:intron 40.0%
GGCTATATGATTCGCTAAAG+AGG + 42386:2506-2525 MS.gene063539:intergenic 40.0%
GGTCACAAGATTGGTATTGT+TGG - 42386:3254-3273 MS.gene063539:intron 40.0%
GGTCTGTATCGTATCTAACA+TGG + 42386:3188-3207 MS.gene063539:intergenic 40.0%
GTAAATGGCCAATTCAAAGG+AGG + 42386:3050-3069 MS.gene063539:intergenic 40.0%
GTTGTCCAAGAGAAAGAAGA+GGG - 42386:3598-3617 MS.gene063539:CDS 40.0%
TAGATACGATACAGACCTGA+TGG - 42386:3191-3210 MS.gene063539:CDS 40.0%
TGAAGTATAAGTGGTCCATC+AGG + 42386:3209-3228 MS.gene063539:intergenic 40.0%
TGCTGGAGCTGTAACAATAA+GGG - 42386:2534-2553 MS.gene063539:CDS 40.0%
TTGCTGGAGCTGTAACAATA+AGG - 42386:2533-2552 MS.gene063539:CDS 40.0%
TTGGATCAACCATTCGTTTG+AGG + 42386:2641-2660 MS.gene063539:intergenic 40.0%
TTGTTGAGGATGGATCAAAC+TGG - 42386:3726-3745 MS.gene063539:intron 40.0%
! ATCACATGCACATTTGAAGC+AGG - 42386:3233-3252 MS.gene063539:CDS 40.0%
! TTTGAAGCAGGTCACAAGAT+TGG - 42386:3245-3264 MS.gene063539:intron 40.0%
!! AACAATAAGGGCTTTTGAGG+GGG - 42386:2546-2565 MS.gene063539:CDS 40.0%
!! ATTGGCATGGCTCTAACTTA+TGG - 42386:2888-2907 MS.gene063539:CDS 40.0%
!! CACTGATTGTTTCTAACCGT+TGG + 42386:2660-2679 MS.gene063539:intergenic 40.0%
!! CATGATTTGAGGTCACGTTT+TGG - 42386:3386-3405 MS.gene063539:intron 40.0%
!! CCTCATTAGTTCTTTTGCTG+AGG + 42386:2464-2483 MS.gene063539:intergenic 40.0%
!! GTGCTCTTTTGAGAAGAAGT+AGG - 42386:3783-3802 MS.gene063539:intron 40.0%
!! TTAAGGCACCGTTTAGTGAT+AGG + 42386:2914-2933 MS.gene063539:intergenic 40.0%
!!! TAGTTTTGGCTGTTGTCACA+TGG - 42386:2265-2284 MS.gene063539:CDS 40.0%
ACAGACCAAATTCTCACCTG+AGG + 42386:2740-2759 MS.gene063539:intergenic 45.0%
AGAAGAGGGTTTAGACTCCT+CGG - 42386:3612-3631 MS.gene063539:CDS 45.0%
AGACCAAATTCTCACCTGAG+GGG + 42386:2738-2757 MS.gene063539:intergenic 45.0%
AGAGCCATGCCAATAATTCC+TGG + 42386:2882-2901 MS.gene063539:intergenic 45.0%
AGTGGGAAGTCCACTCTTAT+CGG - 42386:3287-3306 MS.gene063539:intron 45.0%
ATTCCCCTCAGGTGAGAATT+TGG - 42386:2732-2751 MS.gene063539:CDS 45.0%
ATTGTTGGCAGAACAGGAAG+TGG - 42386:3269-3288 MS.gene063539:intron 45.0%
CAGACCAAATTCTCACCTGA+GGG + 42386:2739-2758 MS.gene063539:intergenic 45.0%
CAGTGATCAAGAGATATGGG+AGG - 42386:3478-3497 MS.gene063539:CDS 45.0%
CCGGTAAATGGCCAATTCAA+AGG + 42386:3053-3072 MS.gene063539:intergenic 45.0%
CTATCGGCCTTCATGATTTG+AGG - 42386:3375-3394 MS.gene063539:intron 45.0%
GAGGCCGAAGAAATTGTAGA+AGG - 42386:3017-3036 MS.gene063539:intron 45.0%
GATGGATCAAACTGGAGCAT+GGG - 42386:3734-3753 MS.gene063539:intron 45.0%
GTGATCCCGTGAAGTATAAG+TGG + 42386:3218-3237 MS.gene063539:intergenic 45.0%
TGTTACGCAGTTGTTGAGGA+TGG - 42386:3716-3735 MS.gene063539:intron 45.0%
TTATGTTGCGTTTCGGTTGC+AGG - 42386:2317-2336 MS.gene063539:CDS 45.0%
TTGTTGGCAGAACAGGAAGT+GGG - 42386:3270-3289 MS.gene063539:intron 45.0%
! ACTATAACTTTTCCTCCCGC+TGG + 42386:3335-3354 MS.gene063539:intergenic 45.0%
!! AACCATGCAAAGTGTTGCAG+TGG + 42386:2695-2714 MS.gene063539:intergenic 45.0%
!! ATCCTCAGTTTTGCTGTGGT+GGG - 42386:2216-2235 MS.gene063539:CDS 45.0%
!! TATCCTCAGTTTTGCTGTGG+TGG - 42386:2215-2234 MS.gene063539:CDS 45.0%
ATCGGCAAACTCAGCGCTAA+TGG + 42386:3873-3892 MS.gene063539:intergenic 50.0%
ATTTCGCCTTGTGGAACCAG+CGG - 42386:3316-3335 MS.gene063539:intron 50.0%
CAAACTGGAGCATGGGACAA+CGG - 42386:3741-3760 MS.gene063539:intron 50.0%
CATATAGCCGAGACTGTTGC+TGG - 42386:2517-2536 MS.gene063539:CDS 50.0%
CGGTGCATTATTTCGCCTTG+TGG - 42386:3307-3326 MS.gene063539:intron 50.0%
GAAGAGGGTTTAGACTCCTC+GGG - 42386:3613-3632 MS.gene063539:CDS 50.0%
GGATGGATCAAACTGGAGCA+TGG - 42386:3733-3752 MS.gene063539:intron 50.0%
TACAGCTCCAGCAACAGTCT+CGG + 42386:2527-2546 MS.gene063539:intergenic 50.0%
ACCTGAGGGGAATGTTCCAG+GGG + 42386:2725-2744 MS.gene063539:intergenic 55.0%
CACCTGAGGGGAATGTTCCA+GGG + 42386:2726-2745 MS.gene063539:intergenic 55.0%
CGCCACTGCAACACTTTGCA+TGG - 42386:2690-2709 MS.gene063539:CDS 55.0%
TCACCTGAGGGGAATGTTCC+AGG + 42386:2727-2746 MS.gene063539:intergenic 55.0%
TGCCCACCACAGCAAAACTG+AGG + 42386:2221-2240 MS.gene063539:intergenic 55.0%
TTTCGCCTTGTGGAACCAGC+GGG - 42386:3317-3336 MS.gene063539:intron 55.0%
CCTGAGGGGAATGTTCCAGG+GGG + 42386:2724-2743 MS.gene063539:intergenic 60.0%
CTGAGGGGAATGTTCCAGGG+GGG + 42386:2723-2742 MS.gene063539:intergenic 60.0%
TGCATGGTTATGCTCCCCCC+TGG - 42386:2706-2725 MS.gene063539:CDS 60.0%
!! TTCCTCCCGCTGGTTCCACA+AGG + 42386:3325-3344 MS.gene063539:intergenic 60.0%
CCCCCTGGAACATTCCCCTC+AGG - 42386:2721-2740 MS.gene063539:CDS 65.0%
CGCCTTGTGGAACCAGCGGG+AGG - 42386:3320-3339 MS.gene063539:intron 70.0%


Chromosome Type Strat End Strand Name
42386 gene 2174 3965 2174 ID=MS.gene063539
42386 mRNA 2174 3965 2174 ID=MS.gene063539.t1;Parent=MS.gene063539
42386 exon 3801 3965 3801 ID=MS.gene063539.t1.exon1;Parent=MS.gene063539.t1
42386 CDS 3801 3965 3801 ID=cds.MS.gene063539.t1;Parent=MS.gene063539.t1
42386 exon 3397 3691 3397 ID=MS.gene063539.t1.exon2;Parent=MS.gene063539.t1
42386 CDS 3397 3691 3397 ID=cds.MS.gene063539.t1;Parent=MS.gene063539.t1
42386 exon 3042 3256 3042 ID=MS.gene063539.t1.exon3;Parent=MS.gene063539.t1
42386 CDS 3042 3256 3042 ID=cds.MS.gene063539.t1;Parent=MS.gene063539.t1
42386 exon 2640 2945 2640 ID=MS.gene063539.t1.exon4;Parent=MS.gene063539.t1
42386 CDS 2640 2945 2640 ID=cds.MS.gene063539.t1;Parent=MS.gene063539.t1
42386 exon 2505 2568 2505 ID=MS.gene063539.t1.exon5;Parent=MS.gene063539.t1
42386 CDS 2505 2568 2505 ID=cds.MS.gene063539.t1;Parent=MS.gene063539.t1
42386 exon 2174 2413 2174 ID=MS.gene063539.t1.exon6;Parent=MS.gene063539.t1
42386 CDS 2174 2413 2174 ID=cds.MS.gene063539.t1;Parent=MS.gene063539.t1
Gene Sequence

>MS.gene063539

GTCTCATCTGATCTTAGTATTATGGATATTGACATTCCATTTATCCTCAGTTTTGCTGTGGTGGGCACTATAAAGCTTTATTCTAATCTTATAGTTTTGGCTGTTGTCACATGGCAAGTCTTGATTATGGCTATACCAATGGTTTATGTTGCGTTTCGGTTGCAGGTAATAAACAGATCCATCTTGAAATTATACTGCTAGTGCTTTTAAGTAGATAATTGTCATTCTTTATTAAGAAAGGAATGTAAGGTATTTTTGTTTGTGTTTTAAGCAGAAATACTACTTTGCCTCAGCAAAAGAACTAATGAGGTTAAATGGCACAACAAAATCCTCTTTAGCGAATCATATAGCCGAGACTGTTGCTGGAGCTGTAACAATAAGGGCTTTTGAGGGGGAAGATCGTTCTTTTGAGAAGAACCTTGATCTAATTGATAATAATGCAAGTGCTTTTTTTCATAGTTTTGCCTCAAACGAATGGTTGATCCAACGGTTAGAAACAATCAGTGCAGTTGTTCTCGCCACTGCAACACTTTGCATGGTTATGCTCCCCCCTGGAACATTCCCCTCAGGTGAGAATTTGGTCTGTATTATCTCTAAAATGTCATTTTTTTTAGTATTGTTACTATCCTCTAAAGTATTTGAATTTCTCATTCAAAGTAACTTATATATCTGAATACACGTTTCTAAATTTCAACATCCTTCATTCCAGGAATTATTGGCATGGCTCTAACTTATGGCCTATCACTAAACGGTGCCTTAATATTTGCAATTCAAAATCAATGCACTCTTGCTAATCACATAATATCAGTAGAGAGACTAAATCAATATATACATATACAAAGTGAGGCCGAAGAAATTGTAGAAGGAAATCGTCCTCCTTTGAATTGGCCATTTACCGGCAAAGTCGAAATATATGACTTGAAGGTAATTAGGACTTTATTTTAAAAATGCGAAACATAATGTTCAGAAAACGTAGGAGTTGAAATATCGTACATAATTTGTTTGATTTTACCATGTTAGATACGATACAGACCTGATGGACCACTTATACTTCACGGGATCACATGCACATTTGAAGCAGGTCACAAGATTGGTATTGTTGGCAGAACAGGAAGTGGGAAGTCCACTCTTATCGGTGCATTATTTCGCCTTGTGGAACCAGCGGGAGGAAAAGTTATAGTTGATGGCATAGACATCTCATCTATCGGCCTTCATGATTTGAGGTCACGTTTTGGTATTATACCTCAAGATCCTACCCTTTTTAATGGGACAGTAAGATTTAACTTGGACCCTTTATCTCAACACAGTGATCAAGAGATATGGGAGGTAAAACAAGCTTAATTTTGTTTCTTTTTGCTTTGCATGAAAATGCGGACTAATTCTTGACTAATATGAAGGTTCTTGGGAAGTGTCAATTGCGAGAAGTTGTCCAAGAGAAAGAAGAGGGTTTAGACTCCTCGGGTACATACATTTTCAAGATTCATTGTCATAGCTATGTTAGAAGTTCATTGTGTTTCCAAGTTAGTATTAACTAGTTAAAATTGTTACGCAGTTGTTGAGGATGGATCAAACTGGAGCATGGGACAACGGCAGTTATTCTGTTTGGGACGTGCTCTTTTGAGAAGAAGTAGGATATTGGTATTGGACGAAGCGACTGCGTCAATTGATAACTCAACTGATCTGATTGTGCAAAAAACCATTAGCGCTGAGTTTGCCGATTGTACAGTAATCACAGTAGCACACAGAATACCAACTGTGATGGATTGCAATATGGTTCTTGCAATAAGTGATG
Protein sequence

>MS.gene063539.t1

VSSDLSIMDIDIPFILSFAVVGTIKLYSNLIVLAVVTWQVLIMAIPMVYVAFRLQKYYFASAKELMRLNGTTKSSLANHIAETVAGAVTIRAFEGEDRSFEKNLDLIDNNASAFFHSFASNEWLIQRLETISAVVLATATLCMVMLPPGTFPSGIIGMALTYGLSLNGALIFAIQNQCTLANHIISVERLNQYIHIQSEAEEIVEGNRPPLNWPFTGKVEIYDLKIRYRPDGPLILHGITCTFEAGHKIGIVGRTGSGKSTLIGALFRLVEPAGGKVIVDGIDISSIGLHDLRSRFGIIPQDPTLFNGTVRFNLDPLSQHSDQEIWEVLGKCQLREVVQEKEEGLDSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNSTDLIVQKTISAEFADCTVITVAHRIPTVMDCNMVLAISD