Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063742.t1 | XP_003609929.1 | 96.6 | 1046 | 36 | 0 | 1 | 1046 | 3 | 1048 | 0.00E+00 | 2029.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063742.t1 | Q9SMZ4 | 69.1 | 1054 | 314 | 6 | 3 | 1046 | 13 | 1064 | 0.0e+00 | 1462.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063742.t1 | G7JS28 | 96.6 | 1046 | 36 | 0 | 1 | 1046 | 3 | 1048 | 0.0e+00 | 2029.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050800 | MS.gene063742 | 0.823158 | 1.61E-53 | -1.69E-46 |
MS.gene052922 | MS.gene063742 | 0.849387 | 3.34E-60 | -1.69E-46 |
MS.gene053175 | MS.gene063742 | 0.819953 | 8.86E-53 | -1.69E-46 |
MS.gene054549 | MS.gene063742 | 0.809192 | 2.14E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063742.t1 | MTR_4g124470 | 96.558 | 1046 | 36 | 0 | 1 | 1046 | 3 | 1048 | 0.0 | 2102 |
MS.gene063742.t1 | MTR_4g124470 | 95.821 | 1053 | 37 | 1 | 1 | 1046 | 3 | 1055 | 0.0 | 2093 |
MS.gene063742.t1 | MTR_4g124470 | 96.377 | 966 | 35 | 0 | 81 | 1046 | 10 | 975 | 0.0 | 1938 |
MS.gene063742.t1 | MTR_4g124470 | 96.369 | 964 | 35 | 0 | 83 | 1046 | 1 | 964 | 0.0 | 1935 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063742.t1 | AT4G33150 | 69.194 | 1055 | 313 | 6 | 2 | 1046 | 12 | 1064 | 0.0 | 1516 |
MS.gene063742.t1 | AT4G33150 | 69.194 | 1055 | 313 | 6 | 2 | 1046 | 12 | 1064 | 0.0 | 1516 |
MS.gene063742.t1 | AT4G33150 | 69.194 | 1055 | 313 | 6 | 2 | 1046 | 12 | 1064 | 0.0 | 1516 |
MS.gene063742.t1 | AT4G33150 | 64.938 | 482 | 164 | 2 | 568 | 1046 | 3 | 482 | 0.0 | 657 |
Find 226 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACCGCAACTCTTTAATTTA+TGG | 0.062968 | 8.2:-8951329 | MS.gene063742:CDS |
CAAACTTGCCTGCTCATTTA+AGG | 0.104303 | 8.2:-8954973 | MS.gene063742:CDS |
AATAGATGTTGATATCATTT+TGG | 0.140848 | 8.2:-8953580 | MS.gene063742:CDS |
TATCAGAATCTGTGAATAAA+TGG | 0.154234 | 8.2:-8958402 | MS.gene063742:CDS |
AGAAGGTTGAACAATAATTT+TGG | 0.164479 | 8.2:+8958315 | None:intergenic |
GACTAGGCTTCGCAATATTT+TGG | 0.165045 | 8.2:-8955046 | MS.gene063742:intron |
GTCCCAATTTGTCACAAATT+TGG | 0.171779 | 8.2:-8955014 | MS.gene063742:CDS |
CTTTCTGTGCCTTGTGAGTA+TGG | 0.204473 | 8.2:+8957895 | None:intergenic |
GAATTGATTGTTGGAGAAAA+TGG | 0.208921 | 8.2:-8957719 | MS.gene063742:CDS |
TTAATTTATGGAGATTTATA+TGG | 0.210990 | 8.2:-8951317 | MS.gene063742:CDS |
AAACACTTTCATGGGATCTT+TGG | 0.220013 | 8.2:+8956589 | None:intergenic |
AAGCCAAATTTGTGACAAAT+TGG | 0.238819 | 8.2:+8955011 | None:intergenic |
TGTAGTTCACTTAGTTTAGA+TGG | 0.273032 | 8.2:+8956880 | None:intergenic |
GGGAAAAGATTACTTGCATT+TGG | 0.294277 | 8.2:-8957698 | MS.gene063742:CDS |
GCACCAGACACATCCGTTAT+TGG | 0.303263 | 8.2:-8956390 | MS.gene063742:intron |
AATGGATTGTTGGCATCTTC+AGG | 0.309153 | 8.2:+8952079 | None:intergenic |
CAATTGATTCACCCTTCTTC+AGG | 0.309166 | 8.2:-8956026 | MS.gene063742:intron |
CTTAGTTAATTGCATGTATT+GGG | 0.310022 | 8.2:-8956181 | MS.gene063742:intron |
TAGATGGATCCACAAAAGTA+TGG | 0.312041 | 8.2:+8956896 | None:intergenic |
CTGCAGCTTCAATAATATCT+AGG | 0.319514 | 8.2:+8954515 | None:intergenic |
AACACTTTCATGGGATCTTT+GGG | 0.324739 | 8.2:+8956590 | None:intergenic |
AGATCATGGCGACACTTTCT+AGG | 0.327865 | 8.2:-8951053 | MS.gene063742:CDS |
AGAGCTACTTTGCTTGAATT+CGG | 0.328075 | 8.2:-8950275 | MS.gene063742:CDS |
AAGAAGGCATAAGCTCTATT+TGG | 0.328153 | 8.2:+8957921 | None:intergenic |
CACTTTGTCAAACACTTTCA+TGG | 0.328950 | 8.2:+8956580 | None:intergenic |
TACCTGAATTTATATGCTAA+TGG | 0.330123 | 8.2:+8952061 | None:intergenic |
AGCTGAATTCCAGTTACATT+TGG | 0.335411 | 8.2:+8953412 | None:intergenic |
GAAAGAAAACATGCCTTTGC+TGG | 0.339421 | 8.2:-8957877 | MS.gene063742:CDS |
GTCTTTACTGGCTCGGGAAA+TGG | 0.347110 | 8.2:-8957352 | MS.gene063742:intron |
TCCTTTCTTGTAGTTTGCTC+TGG | 0.349399 | 8.2:-8956946 | MS.gene063742:intron |
GATGCTGGTATAACAATTCT+TGG | 0.355805 | 8.2:-8952658 | MS.gene063742:CDS |
ATACCTGCTCTGCATCCTTC+AGG | 0.358896 | 8.2:+8953547 | None:intergenic |
GAGCTACTTTGCTTGAATTC+GGG | 0.360095 | 8.2:-8950274 | MS.gene063742:CDS |
ATTCAAGATTTGATGAGAAA+TGG | 0.360260 | 8.2:-8956123 | MS.gene063742:CDS |
AGAAGTAAGAGGAAGATGTT+TGG | 0.360331 | 8.2:-8958445 | None:intergenic |
TATGGAGATTTATATGGAAT+AGG | 0.360466 | 8.2:-8951311 | MS.gene063742:CDS |
GGCGAAACTTTACATATTGA+TGG | 0.362283 | 8.2:-8951696 | MS.gene063742:intron |
TGCAGATGATAAGGCTGTTC+TGG | 0.367690 | 8.2:-8953862 | MS.gene063742:CDS |
TATGATTATGAATTGATTGT+TGG | 0.372175 | 8.2:-8957728 | MS.gene063742:CDS |
AAAATTGGAGTGTAATGTTC+AGG | 0.372458 | 8.2:+8956426 | None:intergenic |
TCTTAGTTAATTGCATGTAT+TGG | 0.375626 | 8.2:-8956182 | MS.gene063742:intron |
TCCAACAGAATTTGCAAAAG+AGG | 0.376427 | 8.2:-8955147 | MS.gene063742:intron |
TCTCCTATCAATGCTCCATC+TGG | 0.384278 | 8.2:+8950928 | None:intergenic |
GGTATTCTATCTCCACTTCA+TGG | 0.384578 | 8.2:+8950324 | None:intergenic |
CTGGATATTATACAAGCTTA+TGG | 0.384591 | 8.2:-8949442 | MS.gene063742:CDS |
TCACCCTGTGGTCTCATCCT+TGG | 0.386368 | 8.2:-8958229 | MS.gene063742:CDS |
GAAGGCATTCCAAATGTAAC+TGG | 0.386769 | 8.2:-8953421 | MS.gene063742:CDS |
TCCAGCTGCTGTGGGAGCTC+TGG | 0.387534 | 8.2:-8950201 | MS.gene063742:intron |
GCGTGGTATATAATCATATA+AGG | 0.391117 | 8.2:+8954916 | None:intergenic |
TCTCTCCTCCATGCGGAAAC+AGG | 0.392544 | 8.2:+8950687 | None:intergenic |
TCCTTCCTTGGCTGCTGCTA+AGG | 0.392618 | 8.2:-8957446 | MS.gene063742:CDS |
ATCCATTAGCATATAAATTC+AGG | 0.392846 | 8.2:-8952063 | MS.gene063742:intron |
TACTAGGTCATACCTATTCC+TGG | 0.394462 | 8.2:+8952619 | None:intergenic |
GCAGATATAACTTGTGATAT+AGG | 0.397513 | 8.2:-8956081 | MS.gene063742:CDS |
AGTTTCGCCGTGATATTTGT+AGG | 0.400233 | 8.2:+8951710 | None:intergenic |
GCTCAAATGCTATCATCATT+TGG | 0.400718 | 8.2:-8953651 | MS.gene063742:CDS |
TAAATTAAAGAGTTGCGGTT+TGG | 0.402978 | 8.2:+8951332 | None:intergenic |
TGATGAATTCTCTTAGTAGA+AGG | 0.407101 | 8.2:+8958298 | None:intergenic |
GATCCAGATGGAGCATTGAT+AGG | 0.408026 | 8.2:-8950931 | MS.gene063742:CDS |
TGTAGTTTGCTCTGGTGCTC+AGG | 0.408673 | 8.2:-8956938 | MS.gene063742:intron |
TTTATATGCTAATGGATTGT+TGG | 0.411001 | 8.2:+8952069 | None:intergenic |
TCACCTGGAGTGTATACTTC+AGG | 0.415501 | 8.2:+8950038 | None:intergenic |
GCAACTCAGGGATTGCCATT+GGG | 0.415806 | 8.2:-8957394 | MS.gene063742:CDS |
AATTGATTGTTGGAGAAAAT+GGG | 0.428975 | 8.2:-8957718 | MS.gene063742:CDS |
CCGTGATATTTGTAGGTGGC+AGG | 0.430034 | 8.2:+8951717 | None:intergenic |
ATGATTCAGCTAAAAGACTA+AGG | 0.430434 | 8.2:-8951391 | MS.gene063742:CDS |
ACCAGAGCTCCCACAGCAGC+TGG | 0.430788 | 8.2:+8950200 | None:intergenic |
GAATTCGGGAAAACTATTGA+TGG | 0.431573 | 8.2:-8950260 | MS.gene063742:CDS |
TATAATCATATAAGGAGGTT+AGG | 0.433937 | 8.2:+8954924 | None:intergenic |
GAAGTAAGAGGAAGATGTTT+GGG | 0.434278 | 8.2:-8958444 | None:intergenic |
ATTGCATGTATTGGGAGAAA+AGG | 0.438391 | 8.2:-8956173 | MS.gene063742:CDS |
CATGTCCATGCTAGATGATA+AGG | 0.441776 | 8.2:-8952686 | MS.gene063742:CDS |
GTAACAGGGTATTTAAGTCT+TGG | 0.442453 | 8.2:-8957511 | MS.gene063742:intron |
AGATCAGTGCAGATTGTTGA+AGG | 0.443060 | 8.2:-8953439 | MS.gene063742:intron |
TTCAGACAAGAGGTGTCTTA+AGG | 0.444078 | 8.2:-8950070 | MS.gene063742:CDS |
AAACATGCCTTTGCTGGATA+AGG | 0.445017 | 8.2:-8957871 | MS.gene063742:intron |
ATTGATTTCTTGCGTGGATT+GGG | 0.450552 | 8.2:-8957650 | MS.gene063742:CDS |
TGATCAATTTCTGATAAATG+AGG | 0.450882 | 8.2:-8954539 | MS.gene063742:CDS |
CGTGGAACCCTCCGTTATGA+AGG | 0.452301 | 8.2:-8951266 | MS.gene063742:intron |
ATGTTTGGGAACGGTGTTGT+TGG | 0.453688 | 8.2:-8958430 | MS.gene063742:CDS |
GGTGAGATGGGCTTGGACCC+AGG | 0.453772 | 8.2:-8952637 | MS.gene063742:CDS |
TGTTAGATATGATGCAATAA+CGG | 0.453846 | 8.2:-8955228 | MS.gene063742:intron |
ATGGGCTTGGACCCAGGAAT+AGG | 0.458978 | 8.2:-8952631 | MS.gene063742:intron |
ATCAGAATCTGTGAATAAAT+GGG | 0.459403 | 8.2:-8958401 | MS.gene063742:CDS |
GATAGGAGAGGAGGATATAT+CGG | 0.461696 | 8.2:-8950914 | MS.gene063742:CDS |
AGGAGAGCTTGCATAGTCAA+TGG | 0.463364 | 8.2:-8954953 | MS.gene063742:CDS |
CCAATGGTATAAAACATTGT+TGG | 0.463677 | 8.2:-8953622 | MS.gene063742:CDS |
ACAGGTTGGTGCAGATGATA+AGG | 0.465036 | 8.2:-8953871 | MS.gene063742:intron |
AGCCAAATTTGTGACAAATT+GGG | 0.465211 | 8.2:+8955012 | None:intergenic |
ATGGCGACACTTTCTAGGAT+TGG | 0.465848 | 8.2:-8951048 | MS.gene063742:CDS |
ATCATACATGTATCCTTCCT+TGG | 0.466001 | 8.2:-8957458 | MS.gene063742:CDS |
AGATTACTTCATCATGGAAC+TGG | 0.467747 | 8.2:-8958343 | MS.gene063742:CDS |
GATTGATTTCTTGCGTGGAT+TGG | 0.470829 | 8.2:-8957651 | MS.gene063742:CDS |
AATTCTTGGTGAGATGGGCT+TGG | 0.470872 | 8.2:-8952644 | MS.gene063742:CDS |
CAGCTGGAATACCAACAGTA+AGG | 0.471355 | 8.2:+8950216 | None:intergenic |
TGCAACTCAGGGATTGCCAT+TGG | 0.471975 | 8.2:-8957395 | MS.gene063742:CDS |
AAAGCAAAAGCAGGAAAGTC+AGG | 0.472612 | 8.2:+8951365 | None:intergenic |
AAAGCACTATGGCATGAAGC+AGG | 0.474044 | 8.2:+8950718 | None:intergenic |
TCACAACACAACCATAAACT+TGG | 0.477682 | 8.2:+8956633 | None:intergenic |
CAACTCAGGGATTGCCATTG+GGG | 0.478672 | 8.2:-8957393 | MS.gene063742:CDS |
CTCTCCTCATTCTTTAGAGT+CGG | 0.479336 | 8.2:+8951003 | None:intergenic |
CTCCATAAATTAAAGAGTTG+CGG | 0.481371 | 8.2:+8951327 | None:intergenic |
GAAGCATCAACTGTCTTTCG+TGG | 0.483593 | 8.2:-8951284 | MS.gene063742:CDS |
AGTAAAATTTCACTTACGCT+TGG | 0.484189 | 8.2:-8953768 | MS.gene063742:CDS |
ATAACAATTCTTGGTGAGAT+GGG | 0.485910 | 8.2:-8952649 | MS.gene063742:CDS |
TATAACAATTCTTGGTGAGA+TGG | 0.488831 | 8.2:-8952650 | MS.gene063742:CDS |
CATTCCCCTCCATGTCTTCG+TGG | 0.489845 | 8.2:+8955198 | None:intergenic |
TGCAGCCTTAGCAGCAGCCA+AGG | 0.493775 | 8.2:+8957441 | None:intergenic |
ACTTTGTCAAACACTTTCAT+GGG | 0.496078 | 8.2:+8956581 | None:intergenic |
CCGATATCACCTACCAATAA+CGG | 0.497549 | 8.2:+8956377 | None:intergenic |
ATCCTACTCCAACACAGAAA+AGG | 0.497780 | 8.2:-8950662 | MS.gene063742:intron |
TTTCTGTGCCTTGTGAGTAT+GGG | 0.498508 | 8.2:+8957896 | None:intergenic |
TGTTGGTATTCCAGCTGCTG+TGG | 0.499554 | 8.2:-8950210 | MS.gene063742:CDS |
CTTGGTAAAGTTCATGAAAA+CGG | 0.501285 | 8.2:-8953750 | MS.gene063742:CDS |
ACTAAGTGAACTACATAAGA+TGG | 0.503097 | 8.2:-8956872 | MS.gene063742:intron |
CTACCAATAACGGATGTGTC+TGG | 0.503459 | 8.2:+8956387 | None:intergenic |
TGGTGAAGAAATTGCAACTC+AGG | 0.505018 | 8.2:-8957407 | MS.gene063742:CDS |
TGTTTGGGAACGGTGTTGTT+GGG | 0.505431 | 8.2:-8958429 | MS.gene063742:CDS |
CAAGCTCTCCTTAAATGAGC+AGG | 0.507376 | 8.2:+8954965 | None:intergenic |
CCTGTAGGTGCCATCCGAGC+TGG | 0.508824 | 8.2:-8951747 | MS.gene063742:CDS |
GTACCTGAAGGATGCAGAGC+AGG | 0.509916 | 8.2:-8953550 | MS.gene063742:intron |
CCAGCTCGGATGGCACCTAC+AGG | 0.510844 | 8.2:+8951747 | None:intergenic |
AGGCAACATCAAAAGCACTA+TGG | 0.511973 | 8.2:+8950707 | None:intergenic |
CCACTTGGTTAACTGTCATG+TGG | 0.512401 | 8.2:-8954482 | MS.gene063742:CDS |
TTTGGGATCTTTGTACCTGA+AGG | 0.513179 | 8.2:-8953562 | MS.gene063742:CDS |
TATAGGGTTTAGTGAGATCA+TGG | 0.516919 | 8.2:-8951067 | MS.gene063742:intron |
CTAGATATTATTGAAGCTGC+AGG | 0.517883 | 8.2:-8954514 | MS.gene063742:CDS |
CGTAGCAAATGCTTGCATTG+AGG | 0.522620 | 8.2:-8953096 | MS.gene063742:intron |
AGGATTGCGTCCAGCTCGGA+TGG | 0.524365 | 8.2:+8951737 | None:intergenic |
GCCTTAGCAGCAGCCAAGGA+AGG | 0.525409 | 8.2:+8957445 | None:intergenic |
TGCAGGAGGCTCCTTCCACT+TGG | 0.526358 | 8.2:-8954497 | MS.gene063742:CDS |
CCGCTGGTTGTTTGATGCCA+AGG | 0.527121 | 8.2:+8958212 | None:intergenic |
AGATGGATCCACAAAAGTAT+GGG | 0.528191 | 8.2:+8956897 | None:intergenic |
CACGAAGACATGGAGGGGAA+TGG | 0.528495 | 8.2:-8955197 | MS.gene063742:CDS |
TCATGAAAACGGCATGGAGA+AGG | 0.528840 | 8.2:-8953739 | MS.gene063742:CDS |
AGAAATGGATGTCCACTTGT+TGG | 0.530432 | 8.2:-8956108 | MS.gene063742:CDS |
TTGTTGGCATCTTCAGGAGA+TGG | 0.531880 | 8.2:+8952085 | None:intergenic |
GCTACGATAATGTGACAACT+AGG | 0.532719 | 8.2:+8953113 | None:intergenic |
TTTAGCCTTATCATCTAGCA+TGG | 0.533798 | 8.2:+8952681 | None:intergenic |
GATGATAAGGCTAAAGATGC+TGG | 0.536549 | 8.2:-8952673 | MS.gene063742:CDS |
GTGTATACTTCAGGTTGGAT+AGG | 0.540931 | 8.2:+8950047 | None:intergenic |
CTTGTGAGTATGGGAAAAGA+AGG | 0.542708 | 8.2:+8957905 | None:intergenic |
TGCAGCTTCAATAATATCTA+GGG | 0.544465 | 8.2:+8954516 | None:intergenic |
TGGAGCATTGATAGGAGAGG+AGG | 0.547265 | 8.2:-8950923 | MS.gene063742:CDS |
TGTGCTAGATTACTTCATCA+TGG | 0.548301 | 8.2:-8958349 | MS.gene063742:CDS |
AAGGCTGCAGTCATTTCTGT+TGG | 0.549082 | 8.2:-8957427 | MS.gene063742:CDS |
CTACGATAATGTGACAACTA+GGG | 0.550212 | 8.2:+8953114 | None:intergenic |
ATATGGTGTATACCTGAAGA+AGG | 0.551418 | 8.2:+8956014 | None:intergenic |
GTTGGTATTCCAGCTGCTGT+GGG | 0.551669 | 8.2:-8950209 | MS.gene063742:CDS |
GATGATAGCATTTGAGCAGC+TGG | 0.553928 | 8.2:+8953657 | None:intergenic |
GATGATCCAAGTGACAGAAA+AGG | 0.555873 | 8.2:+8957478 | None:intergenic |
CACTTGGTTAACTGTCATGT+GGG | 0.556353 | 8.2:-8954481 | MS.gene063742:CDS |
GATGCCAAGGATGAGACCAC+AGG | 0.558412 | 8.2:+8958225 | None:intergenic |
ACTGCCATGGCCCTTACTGT+TGG | 0.561603 | 8.2:-8950227 | MS.gene063742:CDS |
TGGAATTCAGCTTGATGTGA+TGG | 0.562069 | 8.2:-8953401 | MS.gene063742:CDS |
AGATGGAAGTCCACCACAGT+AGG | 0.563553 | 8.2:+8952102 | None:intergenic |
CCCCTCCATGTCTTCGTGGT+AGG | 0.565406 | 8.2:+8955202 | None:intergenic |
TTCAGTTGGATTAGCAAGAG+AGG | 0.565861 | 8.2:+8953818 | None:intergenic |
ACAAACAAAATTCAGACAAG+AGG | 0.572985 | 8.2:-8950080 | MS.gene063742:CDS |
TATAAATCATGCCTTCATAA+CGG | 0.573146 | 8.2:+8951255 | None:intergenic |
AGACATTCCAAAGCAAAAGC+AGG | 0.573853 | 8.2:+8951356 | None:intergenic |
CGACGAGGCACATATGCAGA+AGG | 0.575121 | 8.2:-8952146 | MS.gene063742:CDS |
GATGCTCTCTATGAAGAAGT+TGG | 0.580939 | 8.2:-8958274 | MS.gene063742:CDS |
ATATCTGCTATTCCAACAAG+TGG | 0.581840 | 8.2:+8956096 | None:intergenic |
ACTAGGTCATACCTATTCCT+GGG | 0.582968 | 8.2:+8952620 | None:intergenic |
CATCATTTGGATCCAGCCAA+TGG | 0.586441 | 8.2:-8953638 | MS.gene063742:CDS |
TGGCAGGATTGCGTCCAGCT+CGG | 0.586821 | 8.2:+8951733 | None:intergenic |
TCTTTCACTTCCTACTGTGG+TGG | 0.587351 | 8.2:-8952112 | MS.gene063742:CDS |
GGTGAAGAAATTGCAACTCA+GGG | 0.588076 | 8.2:-8957406 | MS.gene063742:CDS |
GCACAGTGTGATGGAGTCAA+AGG | 0.595862 | 8.2:+8958367 | None:intergenic |
CTTATCATCTAGCATGGACA+TGG | 0.596716 | 8.2:+8952687 | None:intergenic |
TATTTCAGCTGGAATCCTGT+AGG | 0.596927 | 8.2:-8951762 | MS.gene063742:intron |
CAACCTGAAGTATACACTCC+AGG | 0.596974 | 8.2:-8950041 | MS.gene063742:intron |
AGCTGGAATACCAACAGTAA+GGG | 0.599510 | 8.2:+8950217 | None:intergenic |
GAAACTAATCAAGCAAGGCA+TGG | 0.601563 | 8.2:-8956671 | MS.gene063742:CDS |
CTGGAGTGTATACTTCAGGT+TGG | 0.602410 | 8.2:+8950042 | None:intergenic |
GAGTCAGATTTGCGCATGCG+TGG | 0.604903 | 8.2:+8954899 | None:intergenic |
AACAGGAAACTAATCAAGCA+AGG | 0.605183 | 8.2:-8956676 | MS.gene063742:intron |
GGAATGATTGATTTCTTGCG+TGG | 0.606806 | 8.2:-8957656 | MS.gene063742:CDS |
TGATGTTGCCTGTTTCCGCA+TGG | 0.607057 | 8.2:-8950695 | MS.gene063742:CDS |
GGATTCCTACCACGAAGACA+TGG | 0.609570 | 8.2:-8955207 | MS.gene063742:CDS |
TCATCCGACTCTAAAGAATG+AGG | 0.610462 | 8.2:-8951007 | MS.gene063742:CDS |
AGTAATCTAGCACAGTGTGA+TGG | 0.610805 | 8.2:+8958358 | None:intergenic |
AAATTGGAGTGTAATGTTCA+GGG | 0.611393 | 8.2:+8956427 | None:intergenic |
AAGAGGAAGATGTTTGGGAA+CGG | 0.612656 | 8.2:-8958439 | None:intergenic |
AAGTCTTTCACTTCCTACTG+TGG | 0.613298 | 8.2:-8952115 | MS.gene063742:CDS |
TACGATAATGTGACAACTAG+GGG | 0.615232 | 8.2:+8953115 | None:intergenic |
GAGAGGAGGATATATCGGAA+AGG | 0.615819 | 8.2:-8950909 | MS.gene063742:CDS |
AAGCACTATGGCATGAAGCA+GGG | 0.617713 | 8.2:+8950719 | None:intergenic |
GTCTGACAGGTTTCTCTGAG+CGG | 0.621105 | 8.2:-8954571 | MS.gene063742:intron |
AGATGGAGCATTGATAGGAG+AGG | 0.625287 | 8.2:-8950926 | MS.gene063742:CDS |
AATCATGCCTTCATAACGGA+GGG | 0.629458 | 8.2:+8951259 | None:intergenic |
TAAAGTTCATGAAAACGGCA+TGG | 0.629653 | 8.2:-8953745 | MS.gene063742:CDS |
ATGACAGTTAACCAAGTGGA+AGG | 0.634711 | 8.2:+8954486 | None:intergenic |
TCCTACCACGAAGACATGGA+GGG | 0.638823 | 8.2:-8955203 | MS.gene063742:CDS |
CCTGCCACCTACAAATATCA+CGG | 0.645275 | 8.2:-8951717 | MS.gene063742:CDS |
AAATCATGCCTTCATAACGG+AGG | 0.646151 | 8.2:+8951258 | None:intergenic |
ATCTGCTTATAGCTTAACAA+CGG | 0.647351 | 8.2:+8956144 | None:intergenic |
GATATAACTTGTGATATAGG+TGG | 0.647734 | 8.2:-8956078 | MS.gene063742:CDS |
ACACGCACCTTATCCAGCAA+AGG | 0.648996 | 8.2:+8957864 | None:intergenic |
TGCTTATAGCTTAACAACGG+AGG | 0.649696 | 8.2:+8956147 | None:intergenic |
GATATTATTGAAGCTGCAGG+AGG | 0.652514 | 8.2:-8954511 | MS.gene063742:CDS |
AATACCAACAGTAAGGGCCA+TGG | 0.655144 | 8.2:+8950223 | None:intergenic |
TCACAAGACTTGTCACCCTG+TGG | 0.655585 | 8.2:-8958241 | MS.gene063742:CDS |
ATGCCAAGGATGAGACCACA+GGG | 0.658340 | 8.2:+8958226 | None:intergenic |
CCTACCACGAAGACATGGAG+GGG | 0.662630 | 8.2:-8955202 | MS.gene063742:CDS |
ATTGTTCGCGAAGATCCAGA+TGG | 0.664052 | 8.2:-8950943 | MS.gene063742:CDS |
TTCCTACCACGAAGACATGG+AGG | 0.664890 | 8.2:-8955204 | MS.gene063742:CDS |
ACGAGAGGACAAATCCCCAA+TGG | 0.665124 | 8.2:+8957379 | None:intergenic |
CCACATGACAGTTAACCAAG+TGG | 0.665864 | 8.2:+8954482 | None:intergenic |
GTGAATCAATTGACGTAGTG+CGG | 0.666266 | 8.2:+8956037 | None:intergenic |
GATGGATCCACAAAAGTATG+GGG | 0.670075 | 8.2:+8956898 | None:intergenic |
TCGGAAAGGATATTAACACT+AGG | 0.670943 | 8.2:-8950895 | MS.gene063742:CDS |
TGATGATCCAGATCACATGA+TGG | 0.673821 | 8.2:-8952182 | MS.gene063742:intron |
TTCGCCGTGATATTTGTAGG+TGG | 0.679497 | 8.2:+8951713 | None:intergenic |
GACGAGGCACATATGCAGAA+GGG | 0.682146 | 8.2:-8952145 | MS.gene063742:CDS |
TGGTATATAATCATATAAGG+AGG | 0.687295 | 8.2:+8954919 | None:intergenic |
TATGGTGTATACCTGAAGAA+GGG | 0.691493 | 8.2:+8956015 | None:intergenic |
AGAGCTTGCATAGTCAATGG+AGG | 0.692452 | 8.2:-8954950 | MS.gene063742:CDS |
CAAGAGCAAATACAAGACAT+CGG | 0.695369 | 8.2:-8954679 | MS.gene063742:intron |
TGTTGCCTGTTTCCGCATGG+AGG | 0.700266 | 8.2:-8950692 | MS.gene063742:CDS |
TGTTGTGATAGCTCAAGACA+TGG | 0.703959 | 8.2:-8956618 | MS.gene063742:CDS |
CCTTGGCATCAAACAACCAG+CGG | 0.704811 | 8.2:-8958212 | MS.gene063742:intron |
AGGATAGTCTCTCCTCCATG+CGG | 0.707814 | 8.2:+8950680 | None:intergenic |
GGCAATGAAGATGATCGACG+AGG | 0.724936 | 8.2:-8952161 | MS.gene063742:CDS |
ACGATAATGTGACAACTAGG+GGG | 0.726794 | 8.2:+8953116 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 8949414 | 8958452 | 8949414 | ID=MS.gene063742 |
chr8.2 | mRNA | 8949414 | 8958452 | 8949414 | ID=MS.gene063742.t1;Parent=MS.gene063742 |
chr8.2 | exon | 8958213 | 8958452 | 8958213 | ID=MS.gene063742.t1.exon1;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8958213 | 8958452 | 8958213 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8957872 | 8957958 | 8957872 | ID=MS.gene063742.t1.exon2;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8957872 | 8957958 | 8957872 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8957645 | 8957774 | 8957645 | ID=MS.gene063742.t1.exon3;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8957645 | 8957774 | 8957645 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8957353 | 8957526 | 8957353 | ID=MS.gene063742.t1.exon4;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8957353 | 8957526 | 8957353 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8956873 | 8956955 | 8956873 | ID=MS.gene063742.t1.exon5;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8956873 | 8956955 | 8956873 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8956583 | 8956693 | 8956583 | ID=MS.gene063742.t1.exon6;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8956583 | 8956693 | 8956583 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8956391 | 8956466 | 8956391 | ID=MS.gene063742.t1.exon7;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8956391 | 8956466 | 8956391 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8956027 | 8956198 | 8956027 | ID=MS.gene063742.t1.exon8;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8956027 | 8956198 | 8956027 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8955148 | 8955244 | 8955148 | ID=MS.gene063742.t1.exon9;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8955148 | 8955244 | 8955148 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8954896 | 8955062 | 8954896 | ID=MS.gene063742.t1.exon10;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8954896 | 8955062 | 8954896 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8954680 | 8954737 | 8954680 | ID=MS.gene063742.t1.exon11;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8954680 | 8954737 | 8954680 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8954444 | 8954584 | 8954444 | ID=MS.gene063742.t1.exon12;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8954444 | 8954584 | 8954444 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8953551 | 8953889 | 8953551 | ID=MS.gene063742.t1.exon13;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8953551 | 8953889 | 8953551 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8953369 | 8953449 | 8953369 | ID=MS.gene063742.t1.exon14;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8953369 | 8953449 | 8953369 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8953097 | 8953162 | 8953097 | ID=MS.gene063742.t1.exon15;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8953097 | 8953162 | 8953097 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8952632 | 8952749 | 8952632 | ID=MS.gene063742.t1.exon16;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8952632 | 8952749 | 8952632 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8952064 | 8952193 | 8952064 | ID=MS.gene063742.t1.exon17;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8952064 | 8952193 | 8952064 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8951697 | 8951776 | 8951697 | ID=MS.gene063742.t1.exon18;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8951697 | 8951776 | 8951697 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8951267 | 8951425 | 8951267 | ID=MS.gene063742.t1.exon19;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8951267 | 8951425 | 8951267 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8950847 | 8951084 | 8950847 | ID=MS.gene063742.t1.exon20;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8950847 | 8951084 | 8950847 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8950663 | 8950771 | 8950663 | ID=MS.gene063742.t1.exon21;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8950663 | 8950771 | 8950663 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8950202 | 8950363 | 8950202 | ID=MS.gene063742.t1.exon22;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8950202 | 8950363 | 8950202 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8950042 | 8950111 | 8950042 | ID=MS.gene063742.t1.exon23;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8950042 | 8950111 | 8950042 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
chr8.2 | exon | 8949414 | 8949466 | 8949414 | ID=MS.gene063742.t1.exon24;Parent=MS.gene063742.t1 |
chr8.2 | CDS | 8949414 | 8949466 | 8949414 | ID=cds.MS.gene063742.t1;Parent=MS.gene063742.t1 |
Gene Sequence |
Protein sequence |