Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063748.t1 | XP_003609929.1 | 96.6 | 1046 | 36 | 0 | 1 | 1046 | 3 | 1048 | 0.00E+00 | 2029.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063748.t1 | Q9SMZ4 | 69.1 | 1054 | 314 | 6 | 3 | 1046 | 13 | 1064 | 0.0e+00 | 1462.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063748.t1 | G7JS28 | 96.6 | 1046 | 36 | 0 | 1 | 1046 | 3 | 1048 | 0.0e+00 | 2029.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050800 | MS.gene063748 | 0.824495 | 7.83E-54 | -1.69E-46 |
| MS.gene052922 | MS.gene063748 | 0.849416 | 3.28E-60 | -1.69E-46 |
| MS.gene053175 | MS.gene063748 | 0.820331 | 7.26E-53 | -1.69E-46 |
| MS.gene054549 | MS.gene063748 | 0.809666 | 1.69E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063748.t1 | MTR_4g124470 | 96.558 | 1046 | 36 | 0 | 1 | 1046 | 3 | 1048 | 0.0 | 2102 |
| MS.gene063748.t1 | MTR_4g124470 | 95.821 | 1053 | 37 | 1 | 1 | 1046 | 3 | 1055 | 0.0 | 2093 |
| MS.gene063748.t1 | MTR_4g124470 | 96.377 | 966 | 35 | 0 | 81 | 1046 | 10 | 975 | 0.0 | 1938 |
| MS.gene063748.t1 | MTR_4g124470 | 96.369 | 964 | 35 | 0 | 83 | 1046 | 1 | 964 | 0.0 | 1935 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063748.t1 | AT4G33150 | 69.194 | 1055 | 313 | 6 | 2 | 1046 | 12 | 1064 | 0.0 | 1516 |
| MS.gene063748.t1 | AT4G33150 | 69.194 | 1055 | 313 | 6 | 2 | 1046 | 12 | 1064 | 0.0 | 1516 |
| MS.gene063748.t1 | AT4G33150 | 69.194 | 1055 | 313 | 6 | 2 | 1046 | 12 | 1064 | 0.0 | 1516 |
| MS.gene063748.t1 | AT4G33150 | 64.938 | 482 | 164 | 2 | 568 | 1046 | 3 | 482 | 0.0 | 657 |
Find 226 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCGCAACTCTTTAATTTA+TGG | 0.062968 | 8.2:+8910499 | MS.gene063748:CDS |
| CAAACTTGCCTGCTCATTTA+AGG | 0.104303 | 8.2:+8906856 | MS.gene063748:CDS |
| AATAGATGTTGATATCATTT+TGG | 0.140848 | 8.2:+8908249 | MS.gene063748:CDS |
| TATCAGAATCTGTGAATAAA+TGG | 0.154234 | 8.2:+8903427 | MS.gene063748:CDS |
| AGAAGGTTGAACAATAATTT+TGG | 0.164479 | 8.2:-8903514 | None:intergenic |
| GACTAGGCTTCGCAATATTT+TGG | 0.165045 | 8.2:+8906783 | MS.gene063748:intron |
| GTCCCAATTTGTCACAAATT+TGG | 0.171779 | 8.2:+8906815 | MS.gene063748:CDS |
| CTTTCTGTGCCTTGTGAGTA+TGG | 0.204473 | 8.2:-8903934 | None:intergenic |
| GAATTGATTGTTGGAGAAAA+TGG | 0.208921 | 8.2:+8904110 | MS.gene063748:CDS |
| TTAATTTATGGAGATTTATA+TGG | 0.210990 | 8.2:+8910511 | MS.gene063748:CDS |
| AAACACTTTCATGGGATCTT+TGG | 0.220013 | 8.2:-8905240 | None:intergenic |
| AAGCCAAATTTGTGACAAAT+TGG | 0.238819 | 8.2:-8906818 | None:intergenic |
| TGTAGTTCACTTAGTTTAGA+TGG | 0.273032 | 8.2:-8904949 | None:intergenic |
| GGGAAAAGATTACTTGCATT+TGG | 0.294277 | 8.2:+8904131 | MS.gene063748:CDS |
| GCACCAGACACATCCGTTAT+TGG | 0.303263 | 8.2:+8905439 | MS.gene063748:CDS |
| AATGGATTGTTGGCATCTTC+AGG | 0.309153 | 8.2:-8909749 | None:intergenic |
| CAATTGATTCACCCTTCTTC+AGG | 0.309166 | 8.2:+8905803 | MS.gene063748:CDS |
| CTTAGTTAATTGCATGTATT+GGG | 0.310022 | 8.2:+8905648 | MS.gene063748:intron |
| TAGATGGATCCACAAAAGTA+TGG | 0.312041 | 8.2:-8904933 | None:intergenic |
| CTGCAGCTTCAATAATATCT+AGG | 0.319514 | 8.2:-8907314 | None:intergenic |
| AACACTTTCATGGGATCTTT+GGG | 0.324739 | 8.2:-8905239 | None:intergenic |
| AGATCATGGCGACACTTTCT+AGG | 0.327865 | 8.2:+8910775 | MS.gene063748:CDS |
| AGAGCTACTTTGCTTGAATT+CGG | 0.328075 | 8.2:+8911553 | MS.gene063748:CDS |
| AAGAAGGCATAAGCTCTATT+TGG | 0.328153 | 8.2:-8903908 | None:intergenic |
| CACTTTGTCAAACACTTTCA+TGG | 0.328950 | 8.2:-8905249 | None:intergenic |
| TACCTGAATTTATATGCTAA+TGG | 0.330123 | 8.2:-8909767 | None:intergenic |
| AGCTGAATTCCAGTTACATT+TGG | 0.335411 | 8.2:-8908417 | None:intergenic |
| GAAAGAAAACATGCCTTTGC+TGG | 0.339421 | 8.2:+8903952 | MS.gene063748:CDS |
| GTCTTTACTGGCTCGGGAAA+TGG | 0.347110 | 8.2:+8904477 | MS.gene063748:CDS |
| TCCTTTCTTGTAGTTTGCTC+TGG | 0.349399 | 8.2:+8904883 | MS.gene063748:intron |
| GATGCTGGTATAACAATTCT+TGG | 0.355805 | 8.2:+8909170 | MS.gene063748:CDS |
| ATACCTGCTCTGCATCCTTC+AGG | 0.358896 | 8.2:-8908282 | None:intergenic |
| GAGCTACTTTGCTTGAATTC+GGG | 0.360095 | 8.2:+8911554 | MS.gene063748:CDS |
| ATTCAAGATTTGATGAGAAA+TGG | 0.360260 | 8.2:+8905706 | MS.gene063748:CDS |
| AGAAGTAAGAGGAAGATGTT+TGG | 0.360331 | 8.2:+8903384 | None:intergenic |
| TATGGAGATTTATATGGAAT+AGG | 0.360466 | 8.2:+8910517 | MS.gene063748:CDS |
| GGCGAAACTTTACATATTGA+TGG | 0.362283 | 8.2:+8910132 | MS.gene063748:CDS |
| TGCAGATGATAAGGCTGTTC+TGG | 0.367690 | 8.2:+8907967 | MS.gene063748:CDS |
| TATGATTATGAATTGATTGT+TGG | 0.372175 | 8.2:+8904101 | MS.gene063748:CDS |
| AAAATTGGAGTGTAATGTTC+AGG | 0.372458 | 8.2:-8905403 | None:intergenic |
| TCTTAGTTAATTGCATGTAT+TGG | 0.375626 | 8.2:+8905647 | MS.gene063748:intron |
| TCCAACAGAATTTGCAAAAG+AGG | 0.376427 | 8.2:+8906682 | MS.gene063748:CDS |
| TCTCCTATCAATGCTCCATC+TGG | 0.384278 | 8.2:-8910900 | None:intergenic |
| GGTATTCTATCTCCACTTCA+TGG | 0.384578 | 8.2:-8911504 | None:intergenic |
| CTGGATATTATACAAGCTTA+TGG | 0.384591 | 8.2:+8912386 | MS.gene063748:CDS |
| TCACCCTGTGGTCTCATCCT+TGG | 0.386368 | 8.2:+8903600 | MS.gene063748:CDS |
| GAAGGCATTCCAAATGTAAC+TGG | 0.386769 | 8.2:+8908408 | MS.gene063748:CDS |
| TCCAGCTGCTGTGGGAGCTC+TGG | 0.387534 | 8.2:+8911627 | MS.gene063748:CDS |
| GCGTGGTATATAATCATATA+AGG | 0.391117 | 8.2:-8906913 | None:intergenic |
| TCTCTCCTCCATGCGGAAAC+AGG | 0.392544 | 8.2:-8911141 | None:intergenic |
| TCCTTCCTTGGCTGCTGCTA+AGG | 0.392618 | 8.2:+8904383 | MS.gene063748:CDS |
| ATCCATTAGCATATAAATTC+AGG | 0.392846 | 8.2:+8909765 | MS.gene063748:CDS |
| TACTAGGTCATACCTATTCC+TGG | 0.394462 | 8.2:-8909209 | None:intergenic |
| GCAGATATAACTTGTGATAT+AGG | 0.397513 | 8.2:+8905748 | MS.gene063748:CDS |
| AGTTTCGCCGTGATATTTGT+AGG | 0.400233 | 8.2:-8910118 | None:intergenic |
| GCTCAAATGCTATCATCATT+TGG | 0.400718 | 8.2:+8908178 | MS.gene063748:CDS |
| TAAATTAAAGAGTTGCGGTT+TGG | 0.402978 | 8.2:-8910496 | None:intergenic |
| TGATGAATTCTCTTAGTAGA+AGG | 0.407101 | 8.2:-8903531 | None:intergenic |
| GATCCAGATGGAGCATTGAT+AGG | 0.408026 | 8.2:+8910897 | MS.gene063748:CDS |
| TGTAGTTTGCTCTGGTGCTC+AGG | 0.408673 | 8.2:+8904891 | MS.gene063748:intron |
| TTTATATGCTAATGGATTGT+TGG | 0.411001 | 8.2:-8909759 | None:intergenic |
| TCACCTGGAGTGTATACTTC+AGG | 0.415501 | 8.2:-8911790 | None:intergenic |
| GCAACTCAGGGATTGCCATT+GGG | 0.415806 | 8.2:+8904435 | MS.gene063748:CDS |
| AATTGATTGTTGGAGAAAAT+GGG | 0.428975 | 8.2:+8904111 | MS.gene063748:CDS |
| CCGTGATATTTGTAGGTGGC+AGG | 0.430034 | 8.2:-8910111 | None:intergenic |
| ATGATTCAGCTAAAAGACTA+AGG | 0.430434 | 8.2:+8910437 | MS.gene063748:CDS |
| ACCAGAGCTCCCACAGCAGC+TGG | 0.430788 | 8.2:-8911628 | None:intergenic |
| GAATTCGGGAAAACTATTGA+TGG | 0.431573 | 8.2:+8911568 | MS.gene063748:CDS |
| TATAATCATATAAGGAGGTT+AGG | 0.433937 | 8.2:-8906905 | None:intergenic |
| GAAGTAAGAGGAAGATGTTT+GGG | 0.434278 | 8.2:+8903385 | None:intergenic |
| ATTGCATGTATTGGGAGAAA+AGG | 0.438391 | 8.2:+8905656 | MS.gene063748:CDS |
| CATGTCCATGCTAGATGATA+AGG | 0.441776 | 8.2:+8909142 | MS.gene063748:CDS |
| GTAACAGGGTATTTAAGTCT+TGG | 0.442453 | 8.2:+8904318 | MS.gene063748:intron |
| AGATCAGTGCAGATTGTTGA+AGG | 0.443060 | 8.2:+8908390 | MS.gene063748:intron |
| TTCAGACAAGAGGTGTCTTA+AGG | 0.444078 | 8.2:+8911758 | MS.gene063748:CDS |
| AAACATGCCTTTGCTGGATA+AGG | 0.445017 | 8.2:+8903958 | MS.gene063748:CDS |
| ATTGATTTCTTGCGTGGATT+GGG | 0.450552 | 8.2:+8904179 | MS.gene063748:CDS |
| TGATCAATTTCTGATAAATG+AGG | 0.450882 | 8.2:+8907290 | MS.gene063748:CDS |
| CGTGGAACCCTCCGTTATGA+AGG | 0.452301 | 8.2:+8910562 | MS.gene063748:CDS |
| ATGTTTGGGAACGGTGTTGT+TGG | 0.453688 | 8.2:+8903399 | MS.gene063748:CDS |
| GGTGAGATGGGCTTGGACCC+AGG | 0.453772 | 8.2:+8909191 | MS.gene063748:CDS |
| TGTTAGATATGATGCAATAA+CGG | 0.453846 | 8.2:+8906601 | MS.gene063748:intron |
| ATGGGCTTGGACCCAGGAAT+AGG | 0.458978 | 8.2:+8909197 | MS.gene063748:CDS |
| ATCAGAATCTGTGAATAAAT+GGG | 0.459403 | 8.2:+8903428 | MS.gene063748:CDS |
| GATAGGAGAGGAGGATATAT+CGG | 0.461696 | 8.2:+8910914 | MS.gene063748:CDS |
| AGGAGAGCTTGCATAGTCAA+TGG | 0.463364 | 8.2:+8906876 | MS.gene063748:CDS |
| CCAATGGTATAAAACATTGT+TGG | 0.463677 | 8.2:+8908207 | MS.gene063748:CDS |
| ACAGGTTGGTGCAGATGATA+AGG | 0.465036 | 8.2:+8907958 | MS.gene063748:intron |
| AGCCAAATTTGTGACAAATT+GGG | 0.465211 | 8.2:-8906817 | None:intergenic |
| ATGGCGACACTTTCTAGGAT+TGG | 0.465848 | 8.2:+8910780 | MS.gene063748:CDS |
| ATCATACATGTATCCTTCCT+TGG | 0.466001 | 8.2:+8904371 | MS.gene063748:CDS |
| AGATTACTTCATCATGGAAC+TGG | 0.467747 | 8.2:+8903486 | MS.gene063748:CDS |
| GATTGATTTCTTGCGTGGAT+TGG | 0.470829 | 8.2:+8904178 | MS.gene063748:CDS |
| AATTCTTGGTGAGATGGGCT+TGG | 0.470872 | 8.2:+8909184 | MS.gene063748:CDS |
| CAGCTGGAATACCAACAGTA+AGG | 0.471355 | 8.2:-8911612 | None:intergenic |
| TGCAACTCAGGGATTGCCAT+TGG | 0.471975 | 8.2:+8904434 | MS.gene063748:CDS |
| AAAGCAAAAGCAGGAAAGTC+AGG | 0.472612 | 8.2:-8910463 | None:intergenic |
| AAAGCACTATGGCATGAAGC+AGG | 0.474044 | 8.2:-8911110 | None:intergenic |
| TCACAACACAACCATAAACT+TGG | 0.477682 | 8.2:-8905196 | None:intergenic |
| CAACTCAGGGATTGCCATTG+GGG | 0.478672 | 8.2:+8904436 | MS.gene063748:CDS |
| CTCTCCTCATTCTTTAGAGT+CGG | 0.479336 | 8.2:-8910825 | None:intergenic |
| CTCCATAAATTAAAGAGTTG+CGG | 0.481371 | 8.2:-8910501 | None:intergenic |
| GAAGCATCAACTGTCTTTCG+TGG | 0.483593 | 8.2:+8910544 | MS.gene063748:CDS |
| AGTAAAATTTCACTTACGCT+TGG | 0.484189 | 8.2:+8908061 | MS.gene063748:CDS |
| ATAACAATTCTTGGTGAGAT+GGG | 0.485910 | 8.2:+8909179 | MS.gene063748:CDS |
| TATAACAATTCTTGGTGAGA+TGG | 0.488831 | 8.2:+8909178 | MS.gene063748:CDS |
| CATTCCCCTCCATGTCTTCG+TGG | 0.489845 | 8.2:-8906631 | None:intergenic |
| TGCAGCCTTAGCAGCAGCCA+AGG | 0.493775 | 8.2:-8904388 | None:intergenic |
| ACTTTGTCAAACACTTTCAT+GGG | 0.496078 | 8.2:-8905248 | None:intergenic |
| CCGATATCACCTACCAATAA+CGG | 0.497549 | 8.2:-8905452 | None:intergenic |
| ATCCTACTCCAACACAGAAA+AGG | 0.497780 | 8.2:+8911166 | MS.gene063748:CDS |
| TTTCTGTGCCTTGTGAGTAT+GGG | 0.498508 | 8.2:-8903933 | None:intergenic |
| TGTTGGTATTCCAGCTGCTG+TGG | 0.499554 | 8.2:+8911618 | MS.gene063748:CDS |
| CTTGGTAAAGTTCATGAAAA+CGG | 0.501285 | 8.2:+8908079 | MS.gene063748:CDS |
| ACTAAGTGAACTACATAAGA+TGG | 0.503097 | 8.2:+8904957 | MS.gene063748:CDS |
| CTACCAATAACGGATGTGTC+TGG | 0.503459 | 8.2:-8905442 | None:intergenic |
| TGGTGAAGAAATTGCAACTC+AGG | 0.505018 | 8.2:+8904422 | MS.gene063748:CDS |
| TGTTTGGGAACGGTGTTGTT+GGG | 0.505431 | 8.2:+8903400 | MS.gene063748:CDS |
| CAAGCTCTCCTTAAATGAGC+AGG | 0.507376 | 8.2:-8906864 | None:intergenic |
| CCTGTAGGTGCCATCCGAGC+TGG | 0.508824 | 8.2:+8910081 | MS.gene063748:CDS |
| GTACCTGAAGGATGCAGAGC+AGG | 0.509916 | 8.2:+8908279 | MS.gene063748:CDS |
| CCAGCTCGGATGGCACCTAC+AGG | 0.510844 | 8.2:-8910081 | None:intergenic |
| AGGCAACATCAAAAGCACTA+TGG | 0.511973 | 8.2:-8911121 | None:intergenic |
| CCACTTGGTTAACTGTCATG+TGG | 0.512401 | 8.2:+8907347 | MS.gene063748:CDS |
| TTTGGGATCTTTGTACCTGA+AGG | 0.513179 | 8.2:+8908267 | MS.gene063748:CDS |
| TATAGGGTTTAGTGAGATCA+TGG | 0.516919 | 8.2:+8910761 | MS.gene063748:intron |
| CTAGATATTATTGAAGCTGC+AGG | 0.517883 | 8.2:+8907315 | MS.gene063748:CDS |
| CGTAGCAAATGCTTGCATTG+AGG | 0.522620 | 8.2:+8908732 | MS.gene063748:CDS |
| AGGATTGCGTCCAGCTCGGA+TGG | 0.524365 | 8.2:-8910091 | None:intergenic |
| GCCTTAGCAGCAGCCAAGGA+AGG | 0.525409 | 8.2:-8904384 | None:intergenic |
| TGCAGGAGGCTCCTTCCACT+TGG | 0.526358 | 8.2:+8907332 | MS.gene063748:CDS |
| CCGCTGGTTGTTTGATGCCA+AGG | 0.527121 | 8.2:-8903617 | None:intergenic |
| AGATGGATCCACAAAAGTAT+GGG | 0.528191 | 8.2:-8904932 | None:intergenic |
| CACGAAGACATGGAGGGGAA+TGG | 0.528495 | 8.2:+8906632 | MS.gene063748:CDS |
| TCATGAAAACGGCATGGAGA+AGG | 0.528840 | 8.2:+8908090 | MS.gene063748:CDS |
| AGAAATGGATGTCCACTTGT+TGG | 0.530432 | 8.2:+8905721 | MS.gene063748:CDS |
| TTGTTGGCATCTTCAGGAGA+TGG | 0.531880 | 8.2:-8909743 | None:intergenic |
| GCTACGATAATGTGACAACT+AGG | 0.532719 | 8.2:-8908715 | None:intergenic |
| TTTAGCCTTATCATCTAGCA+TGG | 0.533798 | 8.2:-8909147 | None:intergenic |
| GATGATAAGGCTAAAGATGC+TGG | 0.536549 | 8.2:+8909155 | MS.gene063748:CDS |
| GTGTATACTTCAGGTTGGAT+AGG | 0.540931 | 8.2:-8911781 | None:intergenic |
| CTTGTGAGTATGGGAAAAGA+AGG | 0.542708 | 8.2:-8903924 | None:intergenic |
| TGCAGCTTCAATAATATCTA+GGG | 0.544465 | 8.2:-8907313 | None:intergenic |
| TGGAGCATTGATAGGAGAGG+AGG | 0.547265 | 8.2:+8910905 | MS.gene063748:CDS |
| TGTGCTAGATTACTTCATCA+TGG | 0.548301 | 8.2:+8903480 | MS.gene063748:CDS |
| AAGGCTGCAGTCATTTCTGT+TGG | 0.549082 | 8.2:+8904402 | MS.gene063748:CDS |
| CTACGATAATGTGACAACTA+GGG | 0.550212 | 8.2:-8908714 | None:intergenic |
| ATATGGTGTATACCTGAAGA+AGG | 0.551418 | 8.2:-8905815 | None:intergenic |
| GTTGGTATTCCAGCTGCTGT+GGG | 0.551669 | 8.2:+8911619 | MS.gene063748:CDS |
| GATGATAGCATTTGAGCAGC+TGG | 0.553928 | 8.2:-8908172 | None:intergenic |
| GATGATCCAAGTGACAGAAA+AGG | 0.555873 | 8.2:-8904351 | None:intergenic |
| CACTTGGTTAACTGTCATGT+GGG | 0.556353 | 8.2:+8907348 | MS.gene063748:CDS |
| GATGCCAAGGATGAGACCAC+AGG | 0.558412 | 8.2:-8903604 | None:intergenic |
| ACTGCCATGGCCCTTACTGT+TGG | 0.561603 | 8.2:+8911601 | MS.gene063748:CDS |
| TGGAATTCAGCTTGATGTGA+TGG | 0.562069 | 8.2:+8908428 | MS.gene063748:CDS |
| AGATGGAAGTCCACCACAGT+AGG | 0.563553 | 8.2:-8909726 | None:intergenic |
| CCCCTCCATGTCTTCGTGGT+AGG | 0.565406 | 8.2:-8906627 | None:intergenic |
| TTCAGTTGGATTAGCAAGAG+AGG | 0.565861 | 8.2:-8908011 | None:intergenic |
| ACAAACAAAATTCAGACAAG+AGG | 0.572985 | 8.2:+8911748 | MS.gene063748:CDS |
| TATAAATCATGCCTTCATAA+CGG | 0.573146 | 8.2:-8910573 | None:intergenic |
| AGACATTCCAAAGCAAAAGC+AGG | 0.573853 | 8.2:-8910472 | None:intergenic |
| CGACGAGGCACATATGCAGA+AGG | 0.575121 | 8.2:+8909682 | MS.gene063748:CDS |
| GATGCTCTCTATGAAGAAGT+TGG | 0.580939 | 8.2:+8903555 | MS.gene063748:CDS |
| ATATCTGCTATTCCAACAAG+TGG | 0.581840 | 8.2:-8905733 | None:intergenic |
| ACTAGGTCATACCTATTCCT+GGG | 0.582968 | 8.2:-8909208 | None:intergenic |
| CATCATTTGGATCCAGCCAA+TGG | 0.586441 | 8.2:+8908191 | MS.gene063748:CDS |
| TGGCAGGATTGCGTCCAGCT+CGG | 0.586821 | 8.2:-8910095 | None:intergenic |
| TCTTTCACTTCCTACTGTGG+TGG | 0.587351 | 8.2:+8909716 | MS.gene063748:CDS |
| GGTGAAGAAATTGCAACTCA+GGG | 0.588076 | 8.2:+8904423 | MS.gene063748:CDS |
| GCACAGTGTGATGGAGTCAA+AGG | 0.595862 | 8.2:-8903462 | None:intergenic |
| CTTATCATCTAGCATGGACA+TGG | 0.596716 | 8.2:-8909141 | None:intergenic |
| TATTTCAGCTGGAATCCTGT+AGG | 0.596927 | 8.2:+8910066 | MS.gene063748:intron |
| CAACCTGAAGTATACACTCC+AGG | 0.596974 | 8.2:+8911787 | MS.gene063748:CDS |
| AGCTGGAATACCAACAGTAA+GGG | 0.599510 | 8.2:-8911611 | None:intergenic |
| GAAACTAATCAAGCAAGGCA+TGG | 0.601563 | 8.2:+8905158 | MS.gene063748:CDS |
| CTGGAGTGTATACTTCAGGT+TGG | 0.602410 | 8.2:-8911786 | None:intergenic |
| GAGTCAGATTTGCGCATGCG+TGG | 0.604903 | 8.2:-8906930 | None:intergenic |
| AACAGGAAACTAATCAAGCA+AGG | 0.605183 | 8.2:+8905153 | MS.gene063748:intron |
| GGAATGATTGATTTCTTGCG+TGG | 0.606806 | 8.2:+8904173 | MS.gene063748:CDS |
| TGATGTTGCCTGTTTCCGCA+TGG | 0.607057 | 8.2:+8911133 | MS.gene063748:CDS |
| GGATTCCTACCACGAAGACA+TGG | 0.609570 | 8.2:+8906622 | MS.gene063748:CDS |
| TCATCCGACTCTAAAGAATG+AGG | 0.610462 | 8.2:+8910821 | MS.gene063748:CDS |
| AGTAATCTAGCACAGTGTGA+TGG | 0.610805 | 8.2:-8903471 | None:intergenic |
| AAATTGGAGTGTAATGTTCA+GGG | 0.611393 | 8.2:-8905402 | None:intergenic |
| AAGAGGAAGATGTTTGGGAA+CGG | 0.612656 | 8.2:+8903390 | None:intergenic |
| AAGTCTTTCACTTCCTACTG+TGG | 0.613298 | 8.2:+8909713 | MS.gene063748:CDS |
| TACGATAATGTGACAACTAG+GGG | 0.615232 | 8.2:-8908713 | None:intergenic |
| GAGAGGAGGATATATCGGAA+AGG | 0.615819 | 8.2:+8910919 | MS.gene063748:CDS |
| AAGCACTATGGCATGAAGCA+GGG | 0.617713 | 8.2:-8911109 | None:intergenic |
| GTCTGACAGGTTTCTCTGAG+CGG | 0.621105 | 8.2:+8907258 | MS.gene063748:intron |
| AGATGGAGCATTGATAGGAG+AGG | 0.625287 | 8.2:+8910902 | MS.gene063748:CDS |
| AATCATGCCTTCATAACGGA+GGG | 0.629458 | 8.2:-8910569 | None:intergenic |
| TAAAGTTCATGAAAACGGCA+TGG | 0.629653 | 8.2:+8908084 | MS.gene063748:CDS |
| ATGACAGTTAACCAAGTGGA+AGG | 0.634711 | 8.2:-8907343 | None:intergenic |
| TCCTACCACGAAGACATGGA+GGG | 0.638823 | 8.2:+8906626 | MS.gene063748:CDS |
| CCTGCCACCTACAAATATCA+CGG | 0.645275 | 8.2:+8910111 | MS.gene063748:CDS |
| AAATCATGCCTTCATAACGG+AGG | 0.646151 | 8.2:-8910570 | None:intergenic |
| ATCTGCTTATAGCTTAACAA+CGG | 0.647351 | 8.2:-8905685 | None:intergenic |
| GATATAACTTGTGATATAGG+TGG | 0.647734 | 8.2:+8905751 | MS.gene063748:CDS |
| ACACGCACCTTATCCAGCAA+AGG | 0.648996 | 8.2:-8903965 | None:intergenic |
| TGCTTATAGCTTAACAACGG+AGG | 0.649696 | 8.2:-8905682 | None:intergenic |
| GATATTATTGAAGCTGCAGG+AGG | 0.652514 | 8.2:+8907318 | MS.gene063748:CDS |
| AATACCAACAGTAAGGGCCA+TGG | 0.655144 | 8.2:-8911605 | None:intergenic |
| TCACAAGACTTGTCACCCTG+TGG | 0.655585 | 8.2:+8903588 | MS.gene063748:CDS |
| ATGCCAAGGATGAGACCACA+GGG | 0.658340 | 8.2:-8903603 | None:intergenic |
| CCTACCACGAAGACATGGAG+GGG | 0.662630 | 8.2:+8906627 | MS.gene063748:CDS |
| ATTGTTCGCGAAGATCCAGA+TGG | 0.664052 | 8.2:+8910885 | MS.gene063748:CDS |
| TTCCTACCACGAAGACATGG+AGG | 0.664890 | 8.2:+8906625 | MS.gene063748:CDS |
| ACGAGAGGACAAATCCCCAA+TGG | 0.665124 | 8.2:-8904450 | None:intergenic |
| CCACATGACAGTTAACCAAG+TGG | 0.665864 | 8.2:-8907347 | None:intergenic |
| GTGAATCAATTGACGTAGTG+CGG | 0.666266 | 8.2:-8905792 | None:intergenic |
| GATGGATCCACAAAAGTATG+GGG | 0.670075 | 8.2:-8904931 | None:intergenic |
| TCGGAAAGGATATTAACACT+AGG | 0.670943 | 8.2:+8910933 | MS.gene063748:CDS |
| TGATGATCCAGATCACATGA+TGG | 0.673821 | 8.2:+8909646 | MS.gene063748:intron |
| TTCGCCGTGATATTTGTAGG+TGG | 0.679497 | 8.2:-8910115 | None:intergenic |
| GACGAGGCACATATGCAGAA+GGG | 0.682146 | 8.2:+8909683 | MS.gene063748:CDS |
| TGGTATATAATCATATAAGG+AGG | 0.687295 | 8.2:-8906910 | None:intergenic |
| TATGGTGTATACCTGAAGAA+GGG | 0.691493 | 8.2:-8905814 | None:intergenic |
| AGAGCTTGCATAGTCAATGG+AGG | 0.692452 | 8.2:+8906879 | MS.gene063748:CDS |
| CAAGAGCAAATACAAGACAT+CGG | 0.695369 | 8.2:+8907150 | MS.gene063748:CDS |
| TGTTGCCTGTTTCCGCATGG+AGG | 0.700266 | 8.2:+8911136 | MS.gene063748:CDS |
| TGTTGTGATAGCTCAAGACA+TGG | 0.703959 | 8.2:+8905211 | MS.gene063748:CDS |
| CCTTGGCATCAAACAACCAG+CGG | 0.704811 | 8.2:+8903617 | MS.gene063748:CDS |
| AGGATAGTCTCTCCTCCATG+CGG | 0.707814 | 8.2:-8911148 | None:intergenic |
| GGCAATGAAGATGATCGACG+AGG | 0.724936 | 8.2:+8909667 | MS.gene063748:CDS |
| ACGATAATGTGACAACTAGG+GGG | 0.726794 | 8.2:-8908712 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 8903399 | 8912436 | 8903399 | ID=MS.gene063748 |
| chr8.2 | mRNA | 8903399 | 8912436 | 8903399 | ID=MS.gene063748.t1;Parent=MS.gene063748 |
| chr8.2 | exon | 8903399 | 8903638 | 8903399 | ID=MS.gene063748.t1.exon1;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8903399 | 8903638 | 8903399 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8903893 | 8903979 | 8903893 | ID=MS.gene063748.t1.exon2;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8903893 | 8903979 | 8903893 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8904077 | 8904206 | 8904077 | ID=MS.gene063748.t1.exon3;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8904077 | 8904206 | 8904077 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8904325 | 8904498 | 8904325 | ID=MS.gene063748.t1.exon4;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8904325 | 8904498 | 8904325 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8904896 | 8904978 | 8904896 | ID=MS.gene063748.t1.exon5;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8904896 | 8904978 | 8904896 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8905158 | 8905268 | 8905158 | ID=MS.gene063748.t1.exon6;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8905158 | 8905268 | 8905158 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8905385 | 8905460 | 8905385 | ID=MS.gene063748.t1.exon7;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8905385 | 8905460 | 8905385 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8905653 | 8905824 | 8905653 | ID=MS.gene063748.t1.exon8;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8905653 | 8905824 | 8905653 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8906607 | 8906703 | 8906607 | ID=MS.gene063748.t1.exon9;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8906607 | 8906703 | 8906607 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8906789 | 8906955 | 8906789 | ID=MS.gene063748.t1.exon10;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8906789 | 8906955 | 8906789 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8907114 | 8907171 | 8907114 | ID=MS.gene063748.t1.exon11;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8907114 | 8907171 | 8907114 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8907267 | 8907407 | 8907267 | ID=MS.gene063748.t1.exon12;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8907267 | 8907407 | 8907267 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8907962 | 8908300 | 8907962 | ID=MS.gene063748.t1.exon13;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8907962 | 8908300 | 8907962 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8908402 | 8908482 | 8908402 | ID=MS.gene063748.t1.exon14;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8908402 | 8908482 | 8908402 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8908688 | 8908753 | 8908688 | ID=MS.gene063748.t1.exon15;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8908688 | 8908753 | 8908688 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8909101 | 8909218 | 8909101 | ID=MS.gene063748.t1.exon16;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8909101 | 8909218 | 8909101 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8909657 | 8909786 | 8909657 | ID=MS.gene063748.t1.exon17;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8909657 | 8909786 | 8909657 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8910074 | 8910153 | 8910074 | ID=MS.gene063748.t1.exon18;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8910074 | 8910153 | 8910074 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8910425 | 8910583 | 8910425 | ID=MS.gene063748.t1.exon19;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8910425 | 8910583 | 8910425 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8910766 | 8911003 | 8910766 | ID=MS.gene063748.t1.exon20;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8910766 | 8911003 | 8910766 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8911079 | 8911187 | 8911079 | ID=MS.gene063748.t1.exon21;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8911079 | 8911187 | 8911079 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8911487 | 8911648 | 8911487 | ID=MS.gene063748.t1.exon22;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8911487 | 8911648 | 8911487 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8911739 | 8911808 | 8911739 | ID=MS.gene063748.t1.exon23;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8911739 | 8911808 | 8911739 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| chr8.2 | exon | 8912384 | 8912436 | 8912384 | ID=MS.gene063748.t1.exon24;Parent=MS.gene063748.t1 |
| chr8.2 | CDS | 8912384 | 8912436 | 8912384 | ID=cds.MS.gene063748.t1;Parent=MS.gene063748.t1 |
| Gene Sequence |
| Protein sequence |
