Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063763.t1 | XP_013458374.1 | 94.8 | 229 | 11 | 1 | 1 | 229 | 1 | 228 | 2.70E-82 | 315.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063763.t1 | Q94A32 | 72.9 | 107 | 29 | 0 | 123 | 229 | 134 | 240 | 1.3e-37 | 157.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063763.t1 | B7FFA9 | 94.8 | 229 | 11 | 1 | 1 | 229 | 1 | 228 | 2.0e-82 | 315.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050762 | MS.gene063763 | -0.803355 | 3.63E-49 | -1.69E-46 |
| MS.gene050763 | MS.gene063763 | -0.803522 | 3.35E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063763.t1 | MTR_4g123593 | 93.886 | 229 | 13 | 1 | 1 | 229 | 1 | 228 | 7.76e-121 | 343 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063763.t1 | AT3G43520 | 69.748 | 119 | 35 | 1 | 111 | 229 | 123 | 240 | 4.17e-51 | 166 |
| MS.gene063763.t1 | AT2G26240 | 63.810 | 105 | 38 | 0 | 124 | 228 | 4 | 108 | 3.63e-38 | 129 |
Find 76 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGGTCAAATTGACTGGTTT+TGG | 0.265563 | 8.2:+9425202 | None:intergenic |
| GAAATCAGGGAAGGTCTTTC+CGG | 0.282767 | 8.2:-9422833 | MS.gene063763:CDS |
| GGAGTGTGGGATCGGGTTGT+AGG | 0.296999 | 8.2:+9425323 | None:intergenic |
| GGTTCTCGTTTCAAGAAATC+AGG | 0.336113 | 8.2:-9422847 | MS.gene063763:CDS |
| AAAGGAAACGGAGACGATTT+CGG | 0.340053 | 8.2:-9425137 | MS.gene063763:CDS |
| TTGACAGCGGGTGGTGTAAT+GGG | 0.345679 | 8.2:-9423833 | MS.gene063763:intron |
| TGATGCAAGAACAGGTCTTC+CGG | 0.347788 | 8.2:+9423727 | None:intergenic |
| TTTGACAGCGGGTGGTGTAA+TGG | 0.350276 | 8.2:-9423834 | MS.gene063763:intron |
| TGGCAGCCAGAAGTCGCTTT+TGG | 0.351977 | 8.2:-9423798 | MS.gene063763:CDS |
| AAGGATCTGACGGTGATAAA+AGG | 0.360224 | 8.2:-9425052 | MS.gene063763:CDS |
| GGTGGTGGTGGTGAAGGAGG+AGG | 0.373824 | 8.2:-9425104 | MS.gene063763:CDS |
| GGTGGTGAAGGAGGAGGCGG+AGG | 0.375033 | 8.2:-9425098 | MS.gene063763:CDS |
| TGCTGCACTTCTTGTGGTGA+TGG | 0.380439 | 8.2:-9422869 | MS.gene063763:CDS |
| CCCCAGCCAAAAGCGACTTC+TGG | 0.386183 | 8.2:+9423792 | None:intergenic |
| GCCGCCGGTAATGTCTAAAT+CGG | 0.388850 | 8.2:+9425172 | None:intergenic |
| GGTGGTGGTGAAGGAGGAGG+CGG | 0.392210 | 8.2:-9425101 | MS.gene063763:CDS |
| CCGCCGGTAATGTCTAAATC+GGG | 0.413389 | 8.2:+9425173 | None:intergenic |
| TAGTGGTGGGAGTGTGGGAT+CGG | 0.421797 | 8.2:+9425315 | None:intergenic |
| GACGATTTCGGCGGAGGAGG+TGG | 0.426057 | 8.2:-9425125 | MS.gene063763:CDS |
| CTTGCATCATCTGTGGGCCT+TGG | 0.426584 | 8.2:-9423713 | MS.gene063763:intron |
| GATGCAAGAACAGGTCTTCC+GGG | 0.430490 | 8.2:+9423728 | None:intergenic |
| GAGAAATAGTGGTGGGAGTG+TGG | 0.440353 | 8.2:+9425309 | None:intergenic |
| GCTGCACTTCTTGTGGTGAT+GGG | 0.443502 | 8.2:-9422868 | MS.gene063763:CDS |
| AGCGAGTTGAGAATGTGAAT+TGG | 0.445867 | 8.2:+9425241 | None:intergenic |
| GGCGGAGGAGGTGGTGGTGG+TGG | 0.449465 | 8.2:-9425116 | MS.gene063763:CDS |
| AGTGGTGGGAGTGTGGGATC+GGG | 0.454693 | 8.2:+9425316 | None:intergenic |
| TTCGGCGGAGGAGGTGGTGG+TGG | 0.461763 | 8.2:-9425119 | MS.gene063763:CDS |
| GATTTCGGCGGAGGAGGTGG+TGG | 0.468875 | 8.2:-9425122 | MS.gene063763:CDS |
| GACAAGTAAGGGAAAGAAGC+AGG | 0.472035 | 8.2:+9425269 | None:intergenic |
| GGCACTTAGGTCAAATTGAC+TGG | 0.474158 | 8.2:+9425196 | None:intergenic |
| ACCTGTTCTTGCATCATCTG+TGG | 0.483230 | 8.2:-9423720 | MS.gene063763:CDS |
| AACGGAGACGATTTCGGCGG+AGG | 0.486679 | 8.2:-9425131 | MS.gene063763:CDS |
| AGAAGCAGGAGAAGCAAGGA+AGG | 0.489884 | 8.2:+9425283 | None:intergenic |
| CCCACAGATGATGCAAGAAC+AGG | 0.490656 | 8.2:+9423719 | None:intergenic |
| CTAGGTTATGCTATTCTCGT+TGG | 0.491350 | 8.2:-9424996 | MS.gene063763:CDS |
| AAGGAAGGAGCGAGAAATAG+TGG | 0.498256 | 8.2:+9425298 | None:intergenic |
| AACAGGTCTTCCGGGTAGCT+CGG | 0.505808 | 8.2:+9423736 | None:intergenic |
| TTTGATATCACCGCCGCCGC+CGG | 0.506217 | 8.2:+9425157 | None:intergenic |
| TTAGACATTACCGGCGGCGG+CGG | 0.514783 | 8.2:-9425167 | MS.gene063763:CDS |
| GGTTATGCTATTCTCGTTGG+AGG | 0.515433 | 8.2:-9424993 | MS.gene063763:intron |
| CCTGTTCTTGCATCATCTGT+GGG | 0.521720 | 8.2:-9423719 | MS.gene063763:CDS |
| GGAGACGATTTCGGCGGAGG+AGG | 0.526381 | 8.2:-9425128 | MS.gene063763:CDS |
| GAGTGTGGGATCGGGTTGTA+GGG | 0.536706 | 8.2:+9425324 | None:intergenic |
| GGCGGTGATATCAAAGGAAA+CGG | 0.540755 | 8.2:-9425149 | MS.gene063763:CDS |
| GATAGTAACAAAGGCGAGGA+AGG | 0.548487 | 8.2:-9425071 | MS.gene063763:CDS |
| CATATCTGCTGCACTTCTTG+TGG | 0.550309 | 8.2:-9422875 | MS.gene063763:CDS |
| AAGGAGCGAGAAATAGTGGT+GGG | 0.557007 | 8.2:+9425302 | None:intergenic |
| TCAGGGAAGGTCTTTCCGGC+AGG | 0.561022 | 8.2:-9422829 | MS.gene063763:CDS |
| CTTGTGTCGTTCATAATGAC+CGG | 0.562716 | 8.2:-9422796 | MS.gene063763:CDS |
| ACAAGTGACACAACACCTGC+CGG | 0.564042 | 8.2:+9422814 | None:intergenic |
| AGAAATAGTGGTGGGAGTGT+GGG | 0.564262 | 8.2:+9425310 | None:intergenic |
| GGTTGTAGGGCGAAGAGAGA+GGG | 0.564448 | 8.2:+9425337 | None:intergenic |
| ATGACCGGTGGTTACTTGCA+TGG | 0.564829 | 8.2:-9422781 | MS.gene063763:CDS |
| GTAGGGCGAAGAGAGAGGGA+AGG | 0.571612 | 8.2:+9425341 | None:intergenic |
| TGACGGTGATAAAAGGAAGA+TGG | 0.578241 | 8.2:-9425045 | MS.gene063763:CDS |
| ATGTCGCAGAAATTAACTCT+AGG | 0.581649 | 8.2:-9425014 | MS.gene063763:CDS |
| GAATTGGAAAGAGACAAGTA+AGG | 0.589380 | 8.2:+9425257 | None:intergenic |
| GATTTAGACATTACCGGCGG+CGG | 0.591983 | 8.2:-9425170 | MS.gene063763:CDS |
| CGCCGGTAATGTCTAAATCG+GGG | 0.604362 | 8.2:+9425174 | None:intergenic |
| GGAAAGAAGCAGGAGAAGCA+AGG | 0.608774 | 8.2:+9425279 | None:intergenic |
| AATTGGAAAGAGACAAGTAA+GGG | 0.611539 | 8.2:+9425258 | None:intergenic |
| GGCGGCGGCGGTGATATCAA+AGG | 0.624581 | 8.2:-9425155 | MS.gene063763:CDS |
| GTTCTCGTTTCAAGAAATCA+GGG | 0.628947 | 8.2:-9422846 | MS.gene063763:CDS |
| TCGTTTCAAGAAATCAGGGA+AGG | 0.630412 | 8.2:-9422842 | MS.gene063763:CDS |
| GCCGGTAATGTCTAAATCGG+GGG | 0.634119 | 8.2:+9425175 | None:intergenic |
| GTAATGGGCTTTCTGAAGAG+TGG | 0.639725 | 8.2:-9423818 | MS.gene063763:CDS |
| AATTCCATGCAAGTAACCAC+CGG | 0.644415 | 8.2:+9422777 | None:intergenic |
| AAAGGCGAGGAAGGATCTGA+CGG | 0.645896 | 8.2:-9425062 | MS.gene063763:CDS |
| AGACGATAGTAACAAAGGCG+AGG | 0.650186 | 8.2:-9425075 | MS.gene063763:CDS |
| GAAGGAGCGAGAAATAGTGG+TGG | 0.655482 | 8.2:+9425301 | None:intergenic |
| CCCGATTTAGACATTACCGG+CGG | 0.658939 | 8.2:-9425173 | MS.gene063763:CDS |
| GGAGGAGACGATAGTAACAA+AGG | 0.659434 | 8.2:-9425080 | MS.gene063763:CDS |
| GGGTTGTAGGGCGAAGAGAG+AGG | 0.659984 | 8.2:+9425336 | None:intergenic |
| GTGTCGTTCATAATGACCGG+TGG | 0.667012 | 8.2:-9422793 | MS.gene063763:CDS |
| GTCAATGGCAGAAACTGCAG+CGG | 0.675091 | 8.2:-9425390 | None:intergenic |
| GGAAACGGAGACGATTTCGG+CGG | 0.728758 | 8.2:-9425134 | MS.gene063763:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTGGAATATTATTT+TGG | - | chr8.2:9425074-9425093 | MS.gene063763:CDS | 10.0% |
| !! | AAAAAATTATTTAACATGGA+TGG | - | chr8.2:9424617-9424636 | MS.gene063763:intron | 15.0% |
| !! | CTACATAATGATATTTATTT+GGG | - | chr8.2:9424287-9424306 | MS.gene063763:intron | 15.0% |
| !! | TAATATTCCAAAATAAATTC+AGG | + | chr8.2:9425071-9425090 | None:intergenic | 15.0% |
| !! | TCTACATAATGATATTTATT+TGG | - | chr8.2:9424286-9424305 | MS.gene063763:intron | 15.0% |
| !! | TTTCTTATGTTAGTTATTTA+AGG | - | chr8.2:9423358-9423377 | MS.gene063763:intron | 15.0% |
| !! | ATAAACTGGAATAAATTGTA+TGG | - | chr8.2:9423966-9423985 | MS.gene063763:intron | 20.0% |
| !! | ATAGATAAGTGTTTATAAGT+GGG | + | chr8.2:9423808-9423827 | None:intergenic | 20.0% |
| !! | GATATTTGACAACATTAAAT+TGG | - | chr8.2:9424092-9424111 | MS.gene063763:intron | 20.0% |
| !!! | AGTTTTTTATCCATACTTTA+AGG | - | chr8.2:9424805-9424824 | MS.gene063763:intron | 20.0% |
| !!! | TTCTAAAAAACCTTAAAGTA+TGG | + | chr8.2:9424818-9424837 | None:intergenic | 20.0% |
| ! | AATTCCTCCATATAATATTG+CGG | - | chr8.2:9423558-9423577 | MS.gene063763:intron | 25.0% |
| ! | ATTATCGTCGTTATCAAATA+TGG | + | chr8.2:9425007-9425026 | None:intergenic | 25.0% |
| ! | CATAGATAAGTGTTTATAAG+TGG | + | chr8.2:9423809-9423828 | None:intergenic | 25.0% |
| ! | GAAATAAAATCTCACAAAAC+CGG | - | chr8.2:9423762-9423781 | MS.gene063763:CDS | 25.0% |
| ! | TAGATAAGTGTTTATAAGTG+GGG | + | chr8.2:9423807-9423826 | None:intergenic | 25.0% |
| ! | TAGTTATAGATCAGTTTCTA+GGG | + | chr8.2:9423224-9423243 | None:intergenic | 25.0% |
| ! | TCTTAAAGTCTTAAGAACAA+AGG | - | chr8.2:9424569-9424588 | MS.gene063763:intron | 25.0% |
| ! | TTAGTTATAGATCAGTTTCT+AGG | + | chr8.2:9423225-9423244 | None:intergenic | 25.0% |
| !! | GAATAAACTCTTTTACTGTT+GGG | - | chr8.2:9424516-9424535 | MS.gene063763:intron | 25.0% |
| !! | TGAATAAACTCTTTTACTGT+TGG | - | chr8.2:9424515-9424534 | MS.gene063763:intron | 25.0% |
| !!! | GTTTTGAATTTACCTTCAAT+TGG | - | chr8.2:9423258-9423277 | MS.gene063763:intron | 25.0% |
| AAACATTAACACATGAGAGA+AGG | + | chr8.2:9425227-9425246 | None:intergenic | 30.0% | |
| AATATGAAGTGTAGAGTTCA+GGG | + | chr8.2:9424771-9424790 | None:intergenic | 30.0% | |
| AATTGGAAAGAGACAAGTAA+GGG | + | chr8.2:9422890-9422909 | None:intergenic | 30.0% | |
| AATTGTATGGAAATTCCATG+TGG | - | chr8.2:9423979-9423998 | MS.gene063763:intron | 30.0% | |
| AGATAAGTGTTTATAAGTGG+GGG | + | chr8.2:9423806-9423825 | None:intergenic | 30.0% | |
| AGTTAGAATGAAGAACATGT+TGG | - | chr8.2:9423284-9423303 | MS.gene063763:intron | 30.0% | |
| ATTGTATGGAAATTCCATGT+GGG | - | chr8.2:9423980-9423999 | MS.gene063763:intron | 30.0% | |
| GCAAACTCTTTATGAGTTTA+CGG | - | chr8.2:9425103-9425122 | MS.gene063763:CDS | 30.0% | |
| GGAATTTCATATGTATCAGA+AGG | - | chr8.2:9424590-9424609 | MS.gene063763:intron | 30.0% | |
| GTAAAAGAGTTTATTCAGAC+AGG | + | chr8.2:9424512-9424531 | None:intergenic | 30.0% | |
| TAATATGAAGTGTAGAGTTC+AGG | + | chr8.2:9424772-9424791 | None:intergenic | 30.0% | |
| TATGTTGCAAATTGTTCAAC+TGG | - | chr8.2:9424868-9424887 | MS.gene063763:intron | 30.0% | |
| ! | GTGAATTGTAAAGCATTCTT+TGG | - | chr8.2:9424741-9424760 | MS.gene063763:intron | 30.0% |
| !! | ATTTATTTGGGTTTTGACAG+CGG | - | chr8.2:9424299-9424318 | MS.gene063763:intron | 30.0% |
| !! | GATCATTTTTCCTGATGTAT+AGG | - | chr8.2:9425247-9425266 | MS.gene063763:CDS | 30.0% |
| !! | GTTTCTTTGCTTTGAAGTTT+AGG | - | chr8.2:9424970-9424989 | MS.gene063763:intron | 30.0% |
| !!! | AACATGTTTTGTTTGTGTTG+TGG | - | chr8.2:9423932-9423951 | MS.gene063763:intron | 30.0% |
| !!! | ACATGTTTTGTTTGTGTTGT+GGG | - | chr8.2:9423933-9423952 | MS.gene063763:intron | 30.0% |
| ACAATGATGCATCATTCCAT+TGG | - | chr8.2:9424902-9424921 | MS.gene063763:intron | 35.0% | |
| ACATAGCCATGTCTAAATTC+TGG | - | chr8.2:9424705-9424724 | MS.gene063763:intron | 35.0% | |
| AGACTCTTTAACAGATAGTG+AGG | - | chr8.2:9423848-9423867 | MS.gene063763:intron | 35.0% | |
| ATATGAAGTGTAGAGTTCAG+GGG | + | chr8.2:9424770-9424789 | None:intergenic | 35.0% | |
| ATGTCGCAGAAATTAACTCT+AGG | - | chr8.2:9423131-9423150 | MS.gene063763:intron | 35.0% | |
| ATTCTAACTCAGCCAATTGA+AGG | + | chr8.2:9423273-9423292 | None:intergenic | 35.0% | |
| CATAATTCGTTTGATGCCTT+TGG | + | chr8.2:9424852-9424871 | None:intergenic | 35.0% | |
| GAATTGGAAAGAGACAAGTA+AGG | + | chr8.2:9422891-9422910 | None:intergenic | 35.0% | |
| GAGAAGACTGATACAACTAT+TGG | + | chr8.2:9423522-9423541 | None:intergenic | 35.0% | |
| GATGTCAAATATCTTTGTGG+AGG | - | chr8.2:9424023-9424042 | MS.gene063763:intron | 35.0% | |
| GCAAATTGTTCAACTGGTTA+TGG | - | chr8.2:9424874-9424893 | MS.gene063763:intron | 35.0% | |
| GTTCTCGTTTCAAGAAATCA+GGG | - | chr8.2:9425299-9425318 | MS.gene063763:CDS | 35.0% | |
| TAGAACCTACCATTTACCAA+AGG | - | chr8.2:9424833-9424852 | MS.gene063763:intron | 35.0% | |
| TCCCCACTGTTCAAAATTTA+TGG | + | chr8.2:9423617-9423636 | None:intergenic | 35.0% | |
| TGGGGGAAATCAAAATAAAC+TGG | - | chr8.2:9423952-9423971 | MS.gene063763:intron | 35.0% | |
| TGTATCAGTCTTCTCAATAG+TGG | - | chr8.2:9423527-9423546 | MS.gene063763:intron | 35.0% | |
| ! | ATCAATTCTAGTTGCTCACA+AGG | + | chr8.2:9425173-9425192 | None:intergenic | 35.0% |
| ! | CTCGCTTCCTGAATTTATTT+TGG | - | chr8.2:9425061-9425080 | MS.gene063763:CDS | 35.0% |
| ! | GCCATAAATTTTGAACAGTG+GGG | - | chr8.2:9423613-9423632 | MS.gene063763:intron | 35.0% |
| ! | GGCCATAAATTTTGAACAGT+GGG | - | chr8.2:9423612-9423631 | MS.gene063763:intron | 35.0% |
| !! | TTTATTTGGGTTTTGACAGC+GGG | - | chr8.2:9424300-9424319 | MS.gene063763:intron | 35.0% |
| !! | TTTTTCGATTCCATGAAACG+AGG | - | chr8.2:9423681-9423700 | MS.gene063763:intron | 35.0% |
| !!! | ATGTTTTGTTTGTGTTGTGG+GGG | - | chr8.2:9423935-9423954 | MS.gene063763:intron | 35.0% |
| !!! | CATGTTTTGTTTGTGTTGTG+GGG | - | chr8.2:9423934-9423953 | MS.gene063763:intron | 35.0% |
| !!! | TAGGTCAAATTGACTGGTTT+TGG | + | chr8.2:9422946-9422965 | None:intergenic | 35.0% |
| AAAGGAAACGGAGACGATTT+CGG | - | chr8.2:9423008-9423027 | MS.gene063763:intron | 40.0% | |
| AAGGATCTGACGGTGATAAA+AGG | - | chr8.2:9423093-9423112 | MS.gene063763:intron | 40.0% | |
| AATTCCATGCAAGTAACCAC+CGG | + | chr8.2:9425371-9425390 | None:intergenic | 40.0% | |
| ACCATTGCACGAAATTTGTC+TGG | - | chr8.2:9423637-9423656 | MS.gene063763:intron | 40.0% | |
| AGAAAGAGATGATCGTAGGT+GGG | - | chr8.2:9423735-9423754 | MS.gene063763:CDS | 40.0% | |
| AGAGAGAAAGAGATGATCGT+AGG | - | chr8.2:9423731-9423750 | MS.gene063763:CDS | 40.0% | |
| AGAGCACAATTGTGTACCAA+TGG | + | chr8.2:9424921-9424940 | None:intergenic | 40.0% | |
| AGCAGATATGCCTATACATC+AGG | + | chr8.2:9425260-9425279 | None:intergenic | 40.0% | |
| AGTGCCGCAATATTATATGG+AGG | + | chr8.2:9423565-9423584 | None:intergenic | 40.0% | |
| ATTGCACGAAATTTGTCTGG+AGG | - | chr8.2:9423640-9423659 | MS.gene063763:intron | 40.0% | |
| CAACCTCCAGAATTTAGACA+TGG | + | chr8.2:9424714-9424733 | None:intergenic | 40.0% | |
| CGTTTGATGCCTTTGGTAAA+TGG | + | chr8.2:9424845-9424864 | None:intergenic | 40.0% | |
| CTAGGTTATGCTATTCTCGT+TGG | - | chr8.2:9423149-9423168 | MS.gene063763:intron | 40.0% | |
| CTTTAACAGATAGTGAGGCA+GGG | - | chr8.2:9423853-9423872 | MS.gene063763:intron | 40.0% | |
| GAGCTAGAAAAATTCCACAC+TGG | + | chr8.2:9425044-9425063 | None:intergenic | 40.0% | |
| GGGGATGTCAAATATCTTTG+TGG | - | chr8.2:9424020-9424039 | MS.gene063763:intron | 40.0% | |
| GGTTCTCGTTTCAAGAAATC+AGG | - | chr8.2:9425298-9425317 | MS.gene063763:CDS | 40.0% | |
| TAGCCATGTCTAAATTCTGG+AGG | - | chr8.2:9424708-9424727 | MS.gene063763:intron | 40.0% | |
| TCAAATATCTTTGTGGAGGC+AGG | - | chr8.2:9424027-9424046 | MS.gene063763:intron | 40.0% | |
| TCCAGACAAATTTCGTGCAA+TGG | + | chr8.2:9423641-9423660 | None:intergenic | 40.0% | |
| TCGTTTCAAGAAATCAGGGA+AGG | - | chr8.2:9425303-9425322 | MS.gene063763:CDS | 40.0% | |
| TCTGTTAAAGAGTCTCACCT+CGG | + | chr8.2:9423843-9423862 | None:intergenic | 40.0% | |
| TCTTTAACAGATAGTGAGGC+AGG | - | chr8.2:9423852-9423871 | MS.gene063763:intron | 40.0% | |
| TGACGGTGATAAAAGGAAGA+TGG | - | chr8.2:9423100-9423119 | MS.gene063763:intron | 40.0% | |
| TGATGCCTTTGGTAAATGGT+AGG | + | chr8.2:9424841-9424860 | None:intergenic | 40.0% | |
| TGGTACACAATTGTGCTCTT+TGG | - | chr8.2:9424922-9424941 | MS.gene063763:intron | 40.0% | |
| TTGCACGAAATTTGTCTGGA+GGG | - | chr8.2:9423641-9423660 | MS.gene063763:intron | 40.0% | |
| ! | AGCGAGTTGAGAATGTGAAT+TGG | + | chr8.2:9422907-9422926 | None:intergenic | 40.0% |
| ! | CTTGTGTCGTTCATAATGAC+CGG | - | chr8.2:9425349-9425368 | MS.gene063763:CDS | 40.0% |
| ! | GGGCCATAAATTTTGAACAG+TGG | - | chr8.2:9423611-9423630 | MS.gene063763:intron | 40.0% |
| !! | TATGTTTTTACCGAGCTACC+CGG | - | chr8.2:9424399-9424418 | MS.gene063763:intron | 40.0% |
| AAGGAAGGAGCGAGAAATAG+TGG | + | chr8.2:9422850-9422869 | None:intergenic | 45.0% | |
| AAGGAGCGAGAAATAGTGGT+GGG | + | chr8.2:9422846-9422865 | None:intergenic | 45.0% | |
| AATTTGTCTGGAGGGAGAGT+TGG | - | chr8.2:9423649-9423668 | MS.gene063763:intron | 45.0% | |
| ACCATACTTGTCTACCCACA+TGG | + | chr8.2:9423997-9424016 | None:intergenic | 45.0% | |
| ACCTGTTCTTGCATCATCTG+TGG | - | chr8.2:9424425-9424444 | MS.gene063763:intron | 45.0% | |
| AGACGATAGTAACAAAGGCG+AGG | - | chr8.2:9423070-9423089 | MS.gene063763:intron | 45.0% | |
| CACTGCCATCCTTCACTAAT+TGG | - | chr8.2:9423581-9423600 | MS.gene063763:intron | 45.0% | |
| CATATCTGCTGCACTTCTTG+TGG | - | chr8.2:9425270-9425289 | MS.gene063763:CDS | 45.0% | |
| CCTGTTCTTGCATCATCTGT+GGG | - | chr8.2:9424426-9424445 | MS.gene063763:intron | 45.0% | |
| CGATTCCATGAAACGAGGAA+GGG | - | chr8.2:9423686-9423705 | MS.gene063763:intron | 45.0% | |
| GAAAACCCTTCCTCGTTTCA+TGG | + | chr8.2:9423694-9423713 | None:intergenic | 45.0% | |
| GAAATCAGGGAAGGTCTTTC+CGG | - | chr8.2:9425312-9425331 | MS.gene063763:CDS | 45.0% | |
| GACAAGTAAGGGAAAGAAGC+AGG | + | chr8.2:9422879-9422898 | None:intergenic | 45.0% | |
| GAGAAAGAGATGATCGTAGG+TGG | - | chr8.2:9423734-9423753 | MS.gene063763:CDS | 45.0% | |
| GATAGTAACAAAGGCGAGGA+AGG | - | chr8.2:9423074-9423093 | MS.gene063763:intron | 45.0% | |
| GCAATATACACCTCACATGC+CGG | + | chr8.2:9423784-9423803 | None:intergenic | 45.0% | |
| GGAGGAGACGATAGTAACAA+AGG | - | chr8.2:9423065-9423084 | MS.gene063763:intron | 45.0% | |
| GGCACTTAGGTCAAATTGAC+TGG | + | chr8.2:9422952-9422971 | None:intergenic | 45.0% | |
| GGCAGTGCCGCAATATTATA+TGG | + | chr8.2:9423568-9423587 | None:intergenic | 45.0% | |
| GGCGGTGATATCAAAGGAAA+CGG | - | chr8.2:9422996-9423015 | MS.gene063763:intron | 45.0% | |
| GGTTATGCTATTCTCGTTGG+AGG | - | chr8.2:9423152-9423171 | MS.gene063763:intron | 45.0% | |
| GTGGGTAGACAAGTATGGTA+GGG | - | chr8.2:9423998-9424017 | MS.gene063763:intron | 45.0% | |
| TCAAATATCTGCCACCACAG+TGG | + | chr8.2:9424081-9424100 | None:intergenic | 45.0% | |
| TCCATGTGGGTAGACAAGTA+TGG | - | chr8.2:9423993-9424012 | MS.gene063763:intron | 45.0% | |
| TCGATTCCATGAAACGAGGA+AGG | - | chr8.2:9423685-9423704 | MS.gene063763:intron | 45.0% | |
| TCTATGTCATCTCTCAACCG+AGG | - | chr8.2:9423823-9423842 | MS.gene063763:CDS | 45.0% | |
| TGATGCAAGAACAGGTCTTC+CGG | + | chr8.2:9424421-9424440 | None:intergenic | 45.0% | |
| TGCCATCCTTCACTAATTGG+CGG | - | chr8.2:9423584-9423603 | MS.gene063763:intron | 45.0% | |
| TGGCTATGTTTCAGCCTTAG+CGG | + | chr8.2:9424694-9424713 | None:intergenic | 45.0% | |
| TGGGTAGACAAGTATGGTAG+GGG | - | chr8.2:9423999-9424018 | MS.gene063763:intron | 45.0% | |
| TGTGGGTAGACAAGTATGGT+AGG | - | chr8.2:9423997-9424016 | MS.gene063763:intron | 45.0% | |
| ! | AGAAATAGTGGTGGGAGTGT+GGG | + | chr8.2:9422838-9422857 | None:intergenic | 45.0% |
| ! | TTTAGCACTGAAGTCCAGTG+TGG | - | chr8.2:9425027-9425046 | MS.gene063763:CDS | 45.0% |
| !! | GTAATGGGCTTTCTGAAGAG+TGG | - | chr8.2:9424327-9424346 | MS.gene063763:intron | 45.0% |
| !! | AAAAAAAAAATTATTTAACA+TGG | - | chr8.2:9424613-9424632 | MS.gene063763:intron | 5.0% |
| AAAGGCGAGGAAGGATCTGA+CGG | - | chr8.2:9423083-9423102 | MS.gene063763:intron | 50.0% | |
| AATATCTGCCACCACAGTGG+TGG | + | chr8.2:9424078-9424097 | None:intergenic | 50.0% | |
| ACAAGTGACACAACACCTGC+CGG | + | chr8.2:9425334-9425353 | None:intergenic | 50.0% | |
| AGAAGCAGGAGAAGCAAGGA+AGG | + | chr8.2:9422865-9422884 | None:intergenic | 50.0% | |
| AGCCAGACACAAGGTTGTGT+GGG | + | chr8.2:9424055-9424074 | None:intergenic | 50.0% | |
| AGCTCAGCAGTGACTTACCA+AGG | + | chr8.2:9424452-9424471 | None:intergenic | 50.0% | |
| ATGACCGGTGGTTACTTGCA+TGG | - | chr8.2:9425364-9425383 | MS.gene063763:CDS | 50.0% | |
| CACCGCCAATTAGTGAAGGA+TGG | + | chr8.2:9423589-9423608 | None:intergenic | 50.0% | |
| CCCACAGATGATGCAAGAAC+AGG | + | chr8.2:9424429-9424448 | None:intergenic | 50.0% | |
| CCCGATTTAGACATTACCGG+CGG | - | chr8.2:9422972-9422991 | MS.gene063763:intron | 50.0% | |
| CCGCCGGTAATGTCTAAATC+GGG | + | chr8.2:9422975-9422994 | None:intergenic | 50.0% | |
| CGCCGGTAATGTCTAAATCG+GGG | + | chr8.2:9422974-9422993 | None:intergenic | 50.0% | |
| CTTCACTAATTGGCGGTGCA+GGG | - | chr8.2:9423591-9423610 | MS.gene063763:intron | 50.0% | |
| GAAGGAGCGAGAAATAGTGG+TGG | + | chr8.2:9422847-9422866 | None:intergenic | 50.0% | |
| GATGCAAGAACAGGTCTTCC+GGG | + | chr8.2:9424420-9424439 | None:intergenic | 50.0% | |
| GATTTAGACATTACCGGCGG+CGG | - | chr8.2:9422975-9422994 | MS.gene063763:intron | 50.0% | |
| GCCCCCGATTTAGACATTAC+CGG | - | chr8.2:9422969-9422988 | MS.gene063763:intron | 50.0% | |
| GCCGCCGGTAATGTCTAAAT+CGG | + | chr8.2:9422976-9422995 | None:intergenic | 50.0% | |
| GCCGGTAATGTCTAAATCGG+GGG | + | chr8.2:9422973-9422992 | None:intergenic | 50.0% | |
| GCTGCACTTCTTGTGGTGAT+GGG | - | chr8.2:9425277-9425296 | MS.gene063763:CDS | 50.0% | |
| GGAAAGAAGCAGGAGAAGCA+AGG | + | chr8.2:9422869-9422888 | None:intergenic | 50.0% | |
| GGCTATGTTTCAGCCTTAGC+GGG | + | chr8.2:9424693-9424712 | None:intergenic | 50.0% | |
| GGGTAGACAAGTATGGTAGG+GGG | - | chr8.2:9424000-9424019 | MS.gene063763:intron | 50.0% | |
| GGTAGACAAGTATGGTAGGG+GGG | - | chr8.2:9424001-9424020 | MS.gene063763:intron | 50.0% | |
| TCTCACAAAACCGGCATGTG+AGG | - | chr8.2:9423771-9423790 | MS.gene063763:CDS | 50.0% | |
| TCTTGAGTTTCTGCCCGCTA+AGG | - | chr8.2:9424677-9424696 | MS.gene063763:intron | 50.0% | |
| TGCTGCACTTCTTGTGGTGA+TGG | - | chr8.2:9425276-9425295 | MS.gene063763:CDS | 50.0% | |
| TTGACAGCGGGTGGTGTAAT+GGG | - | chr8.2:9424312-9424331 | MS.gene063763:intron | 50.0% | |
| TTTGACAGCGGGTGGTGTAA+TGG | - | chr8.2:9424311-9424330 | MS.gene063763:intron | 50.0% | |
| ! | GAGAAATAGTGGTGGGAGTG+TGG | + | chr8.2:9422839-9422858 | None:intergenic | 50.0% |
| ! | GCAGAAACTGCAGCGGTTTT+CGG | - | chr8.2:9422762-9422781 | MS.gene063763:CDS | 50.0% |
| ! | GTGTCGTTCATAATGACCGG+TGG | - | chr8.2:9425352-9425371 | MS.gene063763:CDS | 50.0% |
| !! | ATTTGGGTTTTGACAGCGGG+TGG | - | chr8.2:9424303-9424322 | MS.gene063763:intron | 50.0% |
| !! | TGTCTAAATCGGGGGCACTT+AGG | + | chr8.2:9422965-9422984 | None:intergenic | 50.0% |
| AACAGGTCTTCCGGGTAGCT+CGG | + | chr8.2:9424412-9424431 | None:intergenic | 55.0% | |
| AGCCCACACAACCTTGTGTC+TGG | - | chr8.2:9424050-9424069 | MS.gene063763:intron | 55.0% | |
| CCTGCACCGCCAATTAGTGA+AGG | + | chr8.2:9423593-9423612 | None:intergenic | 55.0% | |
| CCTTCACTAATTGGCGGTGC+AGG | - | chr8.2:9423590-9423609 | MS.gene063763:intron | 55.0% | |
| CTTGCATCATCTGTGGGCCT+TGG | - | chr8.2:9424432-9424451 | MS.gene063763:intron | 55.0% | |
| GAGCCAGACACAAGGTTGTG+TGG | + | chr8.2:9424056-9424075 | None:intergenic | 55.0% | |
| GGAAACGGAGACGATTTCGG+CGG | - | chr8.2:9423011-9423030 | MS.gene063763:intron | 55.0% | |
| GGTTGTAGGGCGAAGAGAGA+GGG | + | chr8.2:9422811-9422830 | None:intergenic | 55.0% | |
| ! | GAGTGTGGGATCGGGTTGTA+GGG | + | chr8.2:9422824-9422843 | None:intergenic | 55.0% |
| ! | TAGTGGTGGGAGTGTGGGAT+CGG | + | chr8.2:9422833-9422852 | None:intergenic | 55.0% |
| !! | TGGCAGCCAGAAGTCGCTTT+TGG | - | chr8.2:9424347-9424366 | MS.gene063763:intron | 55.0% |
| !!! | AGCCAGAAGTCGCTTTTGGC+TGG | - | chr8.2:9424351-9424370 | MS.gene063763:intron | 55.0% |
| !!! | CAGAAGTCGCTTTTGGCTGG+GGG | - | chr8.2:9424354-9424373 | MS.gene063763:intron | 55.0% |
| !!! | CCAGAAGTCGCTTTTGGCTG+GGG | - | chr8.2:9424353-9424372 | MS.gene063763:intron | 55.0% |
| !!! | GCCAGAAGTCGCTTTTGGCT+GGG | - | chr8.2:9424352-9424371 | MS.gene063763:intron | 55.0% |
| AACGGAGACGATTTCGGCGG+AGG | - | chr8.2:9423014-9423033 | MS.gene063763:intron | 60.0% | |
| CCCCAGCCAAAAGCGACTTC+TGG | + | chr8.2:9424356-9424375 | None:intergenic | 60.0% | |
| GGGTTGTAGGGCGAAGAGAG+AGG | + | chr8.2:9422812-9422831 | None:intergenic | 60.0% | |
| GTAGGGCGAAGAGAGAGGGA+AGG | + | chr8.2:9422807-9422826 | None:intergenic | 60.0% | |
| TCAGGGAAGGTCTTTCCGGC+AGG | - | chr8.2:9425316-9425335 | MS.gene063763:CDS | 60.0% | |
| TTAGACATTACCGGCGGCGG+CGG | - | chr8.2:9422978-9422997 | MS.gene063763:intron | 60.0% | |
| TTTGATATCACCGCCGCCGC+CGG | + | chr8.2:9422991-9423010 | None:intergenic | 60.0% | |
| ! | AGTGGTGGGAGTGTGGGATC+GGG | + | chr8.2:9422832-9422851 | None:intergenic | 60.0% |
| ! | CAGTGGTGGAGCCAGACACA+AGG | + | chr8.2:9424064-9424083 | None:intergenic | 60.0% |
| ! | GGAGTGTGGGATCGGGTTGT+AGG | + | chr8.2:9422825-9422844 | None:intergenic | 60.0% |
| ! | TGTGTCTGGCTCCACCACTG+TGG | - | chr8.2:9424064-9424083 | MS.gene063763:intron | 60.0% |
| !! | GTCTGGAGGGAGAGTTGGTG+TGG | - | chr8.2:9423654-9423673 | MS.gene063763:intron | 60.0% |
| GACGATTTCGGCGGAGGAGG+TGG | - | chr8.2:9423020-9423039 | MS.gene063763:intron | 65.0% | |
| GATTTCGGCGGAGGAGGTGG+TGG | - | chr8.2:9423023-9423042 | MS.gene063763:intron | 65.0% | |
| GGAGACGATTTCGGCGGAGG+AGG | - | chr8.2:9423017-9423036 | MS.gene063763:intron | 65.0% | |
| GGCGGCGGCGGTGATATCAA+AGG | - | chr8.2:9422990-9423009 | MS.gene063763:intron | 65.0% | |
| ! | GGTGGTGGTGAAGGAGGAGG+CGG | - | chr8.2:9423044-9423063 | MS.gene063763:intron | 65.0% |
| ! | GTCTGGCTCCACCACTGTGG+TGG | - | chr8.2:9424067-9424086 | MS.gene063763:intron | 65.0% |
| !! | GGAGGTGGTGGTGGTGGTGA+AGG | - | chr8.2:9423035-9423054 | MS.gene063763:intron | 65.0% |
| !! | GGTGGTGGTGGTGAAGGAGG+AGG | - | chr8.2:9423041-9423060 | MS.gene063763:intron | 65.0% |
| !! | GGTGGTGGTGGTGGTGAAGG+AGG | - | chr8.2:9423038-9423057 | MS.gene063763:intron | 65.0% |
| GGTGGTGAAGGAGGAGGCGG+AGG | - | chr8.2:9423047-9423066 | MS.gene063763:intron | 70.0% | |
| ! | TTCGGCGGAGGAGGTGGTGG+TGG | - | chr8.2:9423026-9423045 | MS.gene063763:intron | 70.0% |
| !! | GGCGGAGGAGGTGGTGGTGG+TGG | - | chr8.2:9423029-9423048 | MS.gene063763:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 9422759 | 9425408 | 9422759 | ID=MS.gene063763 |
| chr8.2 | mRNA | 9422759 | 9425408 | 9422759 | ID=MS.gene063763.t1;Parent=MS.gene063763 |
| chr8.2 | exon | 9424994 | 9425408 | 9424994 | ID=MS.gene063763.t1.exon1;Parent=MS.gene063763.t1 |
| chr8.2 | CDS | 9424994 | 9425408 | 9424994 | ID=cds.MS.gene063763.t1;Parent=MS.gene063763.t1 |
| chr8.2 | exon | 9423714 | 9423848 | 9423714 | ID=MS.gene063763.t1.exon2;Parent=MS.gene063763.t1 |
| chr8.2 | CDS | 9423714 | 9423848 | 9423714 | ID=cds.MS.gene063763.t1;Parent=MS.gene063763.t1 |
| chr8.2 | exon | 9422759 | 9422898 | 9422759 | ID=MS.gene063763.t1.exon3;Parent=MS.gene063763.t1 |
| chr8.2 | CDS | 9422759 | 9422898 | 9422759 | ID=cds.MS.gene063763.t1;Parent=MS.gene063763.t1 |
| Gene Sequence |
| Protein sequence |
