AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene06387

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06387.t1 MTR_3g096480 91.128 789 25 5 1 744 1 789 0.0 1450
MS.gene06387.t1 MTR_8g093880 67.479 821 186 12 1 743 1 818 0.0 1112
MS.gene06387.t1 MTR_3g088790 52.005 798 284 13 1 743 1 754 0.0 819
MS.gene06387.t1 MTR_5g021100 49.587 847 303 15 1 734 1 836 0.0 801
MS.gene06387.t1 MTR_8g076650 50.068 731 279 12 75 733 176 892 0.0 720
MS.gene06387.t1 MTR_5g083150 47.575 536 228 5 241 733 75 600 1.48e-179 526
MS.gene06387.t1 MTR_3g071530 49.617 522 206 8 256 734 142 649 6.80e-171 506
MS.gene06387.t1 MTR_1g022255 44.612 529 227 8 251 733 193 701 1.02e-165 494
MS.gene06387.t1 MTR_1g029730 43.487 499 232 11 257 710 141 634 2.83e-135 414
MS.gene06387.t1 MTR_3g068990 41.955 491 237 10 267 714 162 647 4.82e-132 406
MS.gene06387.t1 MTR_5g080720 39.488 547 273 12 220 714 79 619 5.59e-132 405
MS.gene06387.t1 MTR_5g080720 42.562 484 239 10 220 670 79 556 5.42e-128 393
MS.gene06387.t1 MTR_1g022255 43.860 399 178 6 251 623 193 571 7.57e-119 369
MS.gene06387.t1 MTR_1g442840 40.596 537 245 18 267 742 101 624 1.21e-117 367
MS.gene06387.t1 MTR_1g442840 41.131 513 232 16 288 742 11 511 1.80e-116 361
MS.gene06387.t1 MTR_1g069785 40.341 528 249 15 267 736 71 590 3.94e-115 360
MS.gene06387.t1 MTR_1g075900 38.506 522 257 13 267 731 100 614 3.55e-111 350
MS.gene06387.t1 MTR_8g432620 38.104 517 255 15 267 731 97 600 7.97e-111 349
MS.gene06387.t1 MTR_7g076150 35.993 539 277 14 247 732 65 588 1.02e-106 338
MS.gene06387.t1 MTR_0019s0120 37.214 524 259 18 267 731 114 626 4.38e-102 327
MS.gene06387.t1 MTR_8g071280 36.782 522 261 15 267 731 79 588 1.17e-101 325
MS.gene06387.t1 MTR_8g100075 36.604 530 268 16 260 731 101 620 1.89e-101 325
MS.gene06387.t1 MTR_5g026930 37.524 525 257 17 267 733 81 592 6.53e-101 323
MS.gene06387.t1 MTR_7g006060 39.375 480 235 11 285 711 68 544 1.73e-100 321
MS.gene06387.t1 MTR_1g101370 36.720 561 281 21 233 731 69 617 8.49e-100 321
MS.gene06387.t1 MTR_8g432680 35.835 533 270 19 267 737 114 636 9.20e-97 313
MS.gene06387.t1 MTR_4g098890 38.563 529 252 17 247 719 76 587 1.29e-95 325
MS.gene06387.t1 MTR_8g055840 36.832 543 271 21 246 731 73 600 3.00e-95 308
MS.gene06387.t1 MTR_7g076170 35.305 558 285 22 243 737 87 631 1.13e-92 302
MS.gene06387.t1 MTR_5g040360 37.236 521 257 17 267 731 93 599 1.22e-92 301
MS.gene06387.t1 MTR_5g026930 40.972 432 206 14 267 662 81 499 4.26e-92 297
MS.gene06387.t1 MTR_0019s0120 40.046 432 212 15 267 662 114 534 3.28e-91 295
MS.gene06387.t1 MTR_3g040370 35.539 529 266 17 267 738 94 604 1.41e-90 296
MS.gene06387.t1 MTR_7g076150 35.886 457 230 11 327 732 1 445 1.08e-89 288
MS.gene06387.t1 MTR_1g051055 34.463 531 260 16 267 731 95 603 2.30e-87 287
MS.gene06387.t1 MTR_5g064080 29.912 565 293 20 246 732 132 671 1.15e-66 233
MS.gene06387.t1 MTR_3g074780 30.443 519 270 19 291 732 185 689 5.22e-61 218
MS.gene06387.t1 MTR_4g083030 29.848 526 281 20 267 725 95 599 2.99e-53 194
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06387.t1 AT5G64030 59.162 835 242 13 1 743 1 828 0.0 966
MS.gene06387.t1 AT1G29470 58.809 789 261 13 1 744 1 770 0.0 906
MS.gene06387.t1 AT1G29470 58.809 789 261 13 1 744 1 770 0.0 906
MS.gene06387.t1 AT2G34300 55.779 796 274 13 1 744 1 770 0.0 875
MS.gene06387.t1 AT2G34300 55.779 796 274 13 1 744 1 770 0.0 875
MS.gene06387.t1 AT2G34300 55.779 796 274 13 1 744 1 770 0.0 875
MS.gene06387.t1 AT3G51070 55.971 695 241 8 94 737 215 895 0.0 804
MS.gene06387.t1 AT3G51070 34.659 176 90 6 1 154 1 173 8.61e-17 85.5
MS.gene06387.t1 AT3G51070 58.949 609 204 6 94 670 215 809 0.0 753
MS.gene06387.t1 AT3G51070 34.659 176 90 6 1 154 1 173 9.81e-17 85.1
MS.gene06387.t1 AT2G40280 48.473 524 211 9 257 737 80 587 2.02e-174 513
MS.gene06387.t1 AT1G19430 37.500 760 366 16 21 733 27 724 5.08e-170 506
MS.gene06387.t1 AT1G19430 37.500 760 366 16 21 733 27 724 5.08e-170 506
MS.gene06387.t1 AT3G56080 48.037 535 217 9 242 733 94 610 2.41e-169 501
MS.gene06387.t1 AT3G56080 51.876 453 180 7 242 670 94 532 1.57e-161 478
MS.gene06387.t1 AT1G77260 40.000 550 269 12 216 710 88 631 1.57e-136 417
MS.gene06387.t1 AT5G06050 40.325 553 261 17 223 714 99 643 6.26e-134 412
MS.gene06387.t1 AT2G39750 42.566 491 234 11 267 714 186 671 2.62e-133 410
MS.gene06387.t1 AT1G19430 35.658 631 317 14 21 624 27 595 1.80e-124 385
MS.gene06387.t1 AT4G14360 40.562 498 233 15 267 711 85 572 5.87e-115 360
MS.gene06387.t1 AT4G14360 40.562 498 233 15 267 711 85 572 5.87e-115 360
MS.gene06387.t1 AT3G23300 39.394 528 253 15 267 736 88 606 7.74e-115 360
MS.gene06387.t1 AT3G23300 39.394 528 253 15 267 736 88 606 7.74e-115 360
MS.gene06387.t1 AT1G04430 40.239 502 229 16 267 711 93 580 2.04e-110 348
MS.gene06387.t1 AT1G04430 40.239 502 229 16 267 711 93 580 2.04e-110 348
MS.gene06387.t1 AT1G04430 40.239 502 229 16 267 711 93 580 2.04e-110 348
MS.gene06387.t1 AT4G00740 37.597 516 257 13 269 732 92 594 2.94e-109 345
MS.gene06387.t1 AT4G00740 37.597 516 257 13 269 732 92 594 2.94e-109 345
MS.gene06387.t1 AT4G10440 36.545 550 282 17 240 731 76 616 5.84e-106 337
MS.gene06387.t1 AT1G33170 36.727 550 282 16 240 731 93 634 7.71e-105 335
MS.gene06387.t1 AT1G31850 37.547 530 248 18 267 731 85 596 1.10e-104 333
MS.gene06387.t1 AT1G31850 37.547 530 248 18 267 731 85 596 1.10e-104 333
MS.gene06387.t1 AT1G31850 37.547 530 248 18 267 731 85 596 1.10e-104 333
MS.gene06387.t1 AT1G31850 37.547 530 248 18 267 731 85 596 1.10e-104 333
MS.gene06387.t1 AT5G14430 41.200 500 227 15 267 711 89 576 1.36e-104 333
MS.gene06387.t1 AT4G19120 37.547 530 248 18 267 731 79 590 2.71e-102 327
MS.gene06387.t1 AT4G19120 37.547 530 248 18 267 731 79 590 2.71e-102 327
MS.gene06387.t1 AT5G14430 40.600 500 230 15 267 711 89 576 3.48e-102 327
MS.gene06387.t1 AT2G45750 37.313 536 251 22 270 743 99 611 2.46e-99 320
MS.gene06387.t1 AT1G26850 36.981 530 267 17 267 738 95 615 2.08e-98 317
MS.gene06387.t1 AT1G26850 36.981 530 267 17 267 738 95 615 2.08e-98 317
MS.gene06387.t1 AT4G19120 40.547 439 200 15 267 662 79 499 1.17e-94 303
MS.gene06387.t1 AT2G43200 37.945 506 250 18 267 719 100 594 1.99e-93 304
MS.gene06387.t1 AT2G43200 37.945 506 250 18 267 719 100 594 1.99e-93 304
MS.gene06387.t1 AT4G00750 36.614 508 247 21 289 731 125 622 2.15e-92 301
MS.gene06387.t1 AT5G04060 36.207 522 260 15 267 731 92 597 5.89e-92 300
MS.gene06387.t1 AT3G10200 36.015 522 263 17 267 731 81 588 1.29e-91 298
MS.gene06387.t1 AT4G18030 36.210 533 270 18 256 731 84 603 6.07e-91 297
MS.gene06387.t1 AT3G10200 39.030 433 221 13 267 670 81 499 1.96e-87 287
MS.gene06387.t1 AT1G26850 38.732 426 210 14 267 658 95 503 1.58e-79 264
MS.gene06387.t1 AT1G78240 26.689 592 323 21 229 728 104 676 7.09e-58 209
MS.gene06387.t1 AT1G78240 26.689 592 323 21 229 728 104 676 7.09e-58 209
MS.gene06387.t1 AT1G13860 30.037 536 274 20 267 728 90 598 1.51e-53 195
MS.gene06387.t1 AT1G13860 30.037 536 274 20 267 728 90 598 1.51e-53 195
MS.gene06387.t1 AT1G13860 30.037 536 274 20 267 728 90 598 1.51e-53 195
MS.gene06387.t1 AT1G13860 30.037 536 274 20 267 728 90 598 1.51e-53 195
MS.gene06387.t1 AT2G03480 30.577 520 277 18 268 728 96 590 1.67e-49 184
MS.gene06387.t1 AT2G03480 30.038 526 283 18 268 728 96 601 6.75e-49 182
MS.gene06387.t1 AT1G13860 31.707 410 203 15 383 728 46 442 1.28e-48 178
MS.gene06387.t1 AT2G03480 32.143 308 167 10 268 540 96 396 3.47e-29 121

Find 204 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGAAAGATTTGAATATT+TGG 0.164392 3.1:+76850130 MS.gene06387:CDS
TGCAGGTGGTAAACTTCTTT+TGG 0.230174 3.1:+76848971 MS.gene06387:intron
CAATCCGAAGACATGGCTTT+AGG 0.255854 3.1:+76846262 None:intergenic
CTCATTTGAACTCTGGTCTT+TGG 0.275650 3.1:-76846890 None:intergenic
AAGACCCCGTTCATAAATAA+TGG 0.282831 3.1:-76850193 None:intergenic
CTCTAGCCTTGATTGGGGTT+TGG 0.283882 3.1:+76846356 MS.gene06387:CDS
TCAGGAAGCTTCTGATAAAT+AGG 0.293202 3.1:-76849044 None:intergenic
TAGGCCGCCAGGTGGACTTC+TGG 0.299464 3.1:-76850568 None:intergenic
TTCCATATTTCAACATCTTC+AGG 0.299746 3.1:-76849062 None:intergenic
TTATCAGCAGCAAAATCTTC+AGG 0.304087 3.1:-76849898 None:intergenic
TTTGTTGCTCTAGCCTTGAT+TGG 0.306385 3.1:+76846349 MS.gene06387:CDS
AAGTTAAGGGGCATCAAAAT+TGG 0.309838 3.1:+76847357 MS.gene06387:CDS
GACTCTGCCTGACATTGCTT+GGG 0.309960 3.1:+76848314 MS.gene06387:intron
AGGCAGGTGGGAGGTTCTTC+AGG 0.312570 3.1:-76847156 None:intergenic
TTATCCCATGCCTTGACAAC+TGG 0.320818 3.1:+76847076 MS.gene06387:CDS
TTTGAAAGATTTGAATATTT+GGG 0.321547 3.1:+76850131 MS.gene06387:CDS
CACTAAGCTTGCTGAAGTTA+AGG 0.329223 3.1:+76847343 MS.gene06387:CDS
AATCCGAAGACATGGCTTTA+GGG 0.343883 3.1:+76846263 None:intergenic
TTCCTGAAGATGTTGAAATA+TGG 0.348064 3.1:+76849060 MS.gene06387:CDS
CCTTCCCATTATTTATGAAC+GGG 0.357509 3.1:+76850188 MS.gene06387:CDS
TCAAATGAGGTATTCCCTTC+CGG 0.367877 3.1:+76846904 MS.gene06387:CDS
TGGGAACTTGACAACCAATA+TGG 0.368562 3.1:-76849850 None:intergenic
CAAATGAGGTATTCCCTTCC+GGG 0.376544 3.1:+76846905 MS.gene06387:CDS
ATGGATATGAACTCAATCTA+TGG 0.377899 3.1:+76849997 MS.gene06387:CDS
AATGAAACTACGACACAAAC+TGG 0.384495 3.1:+76846946 MS.gene06387:CDS
AGTTCCCAAGTTGGAGTCTA+TGG 0.386840 3.1:+76849865 MS.gene06387:CDS
TTGTTGCTCTAGCCTTGATT+GGG 0.386986 3.1:+76846350 MS.gene06387:CDS
ATAGAGCGCTTATATCCTTC+AGG 0.387610 3.1:-76847189 None:intergenic
AGACTCTGCCTGACATTGCT+TGG 0.390574 3.1:+76848313 MS.gene06387:intron
CCGCGTTCACTTGAACTAAC+TGG 0.395097 3.1:-76849784 None:intergenic
TCAAAATTGGGTGAAAGTTA+CGG 0.401724 3.1:+76847370 MS.gene06387:CDS
CCTCCAAGACTGGGTACAAT+TGG 0.405008 3.1:+76847022 MS.gene06387:CDS
ACAAAGAGGCTTCCCTTCCC+TGG 0.407202 3.1:+76848508 MS.gene06387:CDS
CAAAATTGGGTGAAAGTTAC+GGG 0.407429 3.1:+76847371 MS.gene06387:CDS
GAAGTGCCCCATGCTTGAAT+TGG 0.410323 3.1:-76847424 None:intergenic
CTCCGTCTCCTTAGGCCGCC+AGG 0.412774 3.1:-76850579 None:intergenic
ATTCAAGAGTCCTCCAAGAC+TGG 0.418254 3.1:+76847012 MS.gene06387:CDS
CAAGTCTTATCTAAACGGAT+TGG 0.419452 3.1:+76849945 MS.gene06387:CDS
CCTGCTATATCTGCTGTAAT+GGG 0.421591 3.1:+76848484 MS.gene06387:CDS
TCCTGCTATATCTGCTGTAA+TGG 0.421692 3.1:+76848483 MS.gene06387:CDS
CATTAACAAAATCAATATGC+TGG 0.424608 3.1:+76849182 MS.gene06387:CDS
GGTACATTGGTCAGCCTGGC+TGG 0.424736 3.1:-76849829 None:intergenic
GGCTGACCAATGTACCATAT+TGG 0.427892 3.1:+76849836 MS.gene06387:CDS
AGACCCCGTTCATAAATAAT+GGG 0.428891 3.1:-76850192 None:intergenic
ACTAAGCTTGCTGAAGTTAA+GGG 0.433369 3.1:+76847344 MS.gene06387:CDS
TTGACAACTGGAAAGCGATT+AGG 0.436526 3.1:+76847088 MS.gene06387:CDS
TTTCCAATTGTACCCAGTCT+TGG 0.437033 3.1:-76847025 None:intergenic
TCATAACAATCATTGGATAG+TGG 0.441820 3.1:-76849264 None:intergenic
TCGTTGCTCATAACAATCAT+TGG 0.446283 3.1:-76849271 None:intergenic
GGCCAGAAAAGTGGCCAGCC+AGG 0.448570 3.1:+76849815 MS.gene06387:CDS
GTGTCCAAGTCTTATCTAAA+CGG 0.458820 3.1:+76849940 MS.gene06387:CDS
TCAAGGCATGGGATAAAGTC+GGG 0.458938 3.1:-76847069 None:intergenic
CAATCCGTTTAGATAAGACT+TGG 0.459235 3.1:-76849944 None:intergenic
GAAGGAATACCATGCTGCAT+TGG 0.460905 3.1:-76849334 None:intergenic
TTCTGTAGTTCCCGTGCAAA+AGG 0.463204 3.1:+76846393 MS.gene06387:CDS
TTGAGTGTCTCCGTCTCCTT+AGG 0.465804 3.1:-76850587 None:intergenic
AAGGAATACCATGCTGCATT+GGG 0.465896 3.1:-76849333 None:intergenic
AGGTTCAATTTGCTCTTGAG+AGG 0.466968 3.1:+76848455 MS.gene06387:intron
AAGTCTTATCTAAACGGATT+GGG 0.468240 3.1:+76849946 MS.gene06387:CDS
CGTTTGCCCCAAGCAATGTC+AGG 0.469178 3.1:-76848321 None:intergenic
CCAATTGTACCCAGTCTTGG+AGG 0.469573 3.1:-76847022 None:intergenic
AAAGAGAAAGCCTCCGAAGC+TGG 0.471336 3.1:-76848379 None:intergenic
CGTGCAAAAGGTCGTGCCTC+GGG 0.471678 3.1:+76846405 MS.gene06387:CDS
TGAAAAGAAAGATGAATCAG+AGG 0.472280 3.1:+76846720 MS.gene06387:CDS
ACAGACTGAGGTGAGGGAAC+AGG 0.474299 3.1:+76846450 MS.gene06387:CDS
CAGCGAAGAGGCGTCTACTA+AGG 0.476422 3.1:+76846678 MS.gene06387:CDS
CGGACAATAAGCTTTCCTTC+AGG 0.478801 3.1:-76850443 None:intergenic
GGATGTGGAGTTGCCAGCTT+CGG 0.480928 3.1:+76848366 MS.gene06387:CDS
AGTTAAGGGGCATCAAAATT+GGG 0.484810 3.1:+76847358 MS.gene06387:CDS
GGAAAGCGATTAGGAGTCTT+CGG 0.484828 3.1:+76847097 MS.gene06387:CDS
CCGTGCAAAAGGTCGTGCCT+CGG 0.487700 3.1:+76846404 MS.gene06387:CDS
CCCTTCCCATTATTTATGAA+CGG 0.488962 3.1:+76850187 MS.gene06387:CDS
CTGAAGGAAAGCTTATTGTC+CGG 0.497261 3.1:+76850444 MS.gene06387:CDS
TAACAAACCCTCCTTATCCT+TGG 0.499118 3.1:-76850540 None:intergenic
AGAGTTCCATGGCACATTGA+AGG 0.500328 3.1:+76848565 MS.gene06387:CDS
ATCAAATACTCTCCCAGGGA+AGG 0.510333 3.1:-76848521 None:intergenic
CATGACCTACTCCAAGGATA+AGG 0.511195 3.1:+76850529 MS.gene06387:CDS
GAAGTCCACCTGGCGGCCTA+AGG 0.514851 3.1:+76850571 MS.gene06387:CDS
AAGTGCCCCATGCTTGAATT+GGG 0.517462 3.1:-76847423 None:intergenic
TTGAATTGGGTTCCACCACC+AGG 0.519299 3.1:-76847410 None:intergenic
AGCAGAGTCAAAGAATGAAA+AGG 0.519819 3.1:+76846987 MS.gene06387:CDS
GCTTTCCAGTTGTCAAGGCA+TGG 0.520419 3.1:-76847081 None:intergenic
AGATAGTAATGTAGAGGAGA+AGG 0.521421 3.1:+76846804 MS.gene06387:CDS
TATCAGCAGCAAAATCTTCA+GGG 0.525199 3.1:-76849897 None:intergenic
ATGGAGGAGATCATACGTCC+TGG 0.525368 3.1:-76850258 None:intergenic
TTCAATTTGCTCTTGAGAGG+GGG 0.525841 3.1:+76848458 MS.gene06387:CDS
CACCTGGCGGCCTAAGGAGA+CGG 0.529728 3.1:+76850577 MS.gene06387:CDS
GTGGAACCCAATTCAAGCAT+GGG 0.531941 3.1:+76847417 MS.gene06387:CDS
GGTTCAATTTGCTCTTGAGA+GGG 0.532634 3.1:+76848456 MS.gene06387:intron
TGCCTTGTCTCTCTTCCTGA+AGG 0.535020 3.1:+76847174 MS.gene06387:CDS
GCAGCAAAATCTTCAGGGGC+CGG 0.538266 3.1:-76849892 None:intergenic
CAAAGAGGCTTCCCTTCCCT+GGG 0.538740 3.1:+76848509 MS.gene06387:CDS
CATCATCCAAACCCCAATCA+AGG 0.540492 3.1:-76846362 None:intergenic
ACTGCATCAAATACTCTCCC+AGG 0.541601 3.1:-76848526 None:intergenic
CGGCAGTTTGAAGATAATCC+TGG 0.544215 3.1:+76846499 MS.gene06387:CDS
CATTAACGAGCTTGAGAGCA+TGG 0.545161 3.1:+76850481 MS.gene06387:CDS
ATATGGTACATTGGTCAGCC+TGG 0.547368 3.1:-76849833 None:intergenic
TGAAGGAAAGCTTATTGTCC+GGG 0.549044 3.1:+76850445 MS.gene06387:CDS
TGGGATAAAGTCGGGGCCAG+CGG 0.549843 3.1:-76847061 None:intergenic
TTACATTGACTTTATACAAG+AGG 0.550306 3.1:+76847448 MS.gene06387:CDS
GGGAAATATTCTAGAGTAGA+CGG 0.551732 3.1:+76846283 MS.gene06387:CDS
ATTAACAAAATCAATATGCT+GGG 0.551786 3.1:+76849183 MS.gene06387:CDS
GAGATCATACGTCCTGGGAT+AGG 0.553125 3.1:-76850252 None:intergenic
TTGCCTGAGGATGCGACCAA+GGG 0.553259 3.1:+76846526 MS.gene06387:CDS
TGGTTGTCAAGTTCCCAAGT+TGG 0.553335 3.1:+76849856 MS.gene06387:CDS
GGAATACCTCATTTGAACTC+TGG 0.553898 3.1:-76846897 None:intergenic
CTTTCCAGTTGTCAAGGCAT+GGG 0.554013 3.1:-76847080 None:intergenic
GGTCACAGTGGCCAGAAAAG+TGG 0.554071 3.1:+76849806 MS.gene06387:CDS
AAAGTTTGTAATGTTACCGC+TGG 0.554252 3.1:+76847045 MS.gene06387:CDS
TGTGGAGTTGCCAGCTTCGG+AGG 0.557116 3.1:+76848369 MS.gene06387:CDS
CCCATTACAGCAGATATAGC+AGG 0.558260 3.1:-76848484 None:intergenic
GAATTCAGTGGTCAAATGTA+CGG 0.565252 3.1:+76849968 MS.gene06387:CDS
CCCGTTCATAAATAATGGGA+AGG 0.566248 3.1:-76850188 None:intergenic
AGCTCAGACTGAGCCCCGGA+AGG 0.566755 3.1:-76846919 None:intergenic
GTCAAGGCATGGGATAAAGT+CGG 0.567476 3.1:-76847070 None:intergenic
CTGAACAGAGTATTGCGGCC+TGG 0.570629 3.1:+76848996 MS.gene06387:CDS
AGTTGGAGTCTATGGTAAGC+CGG 0.573432 3.1:+76849873 MS.gene06387:CDS
GGTGGAACCCAATTCAAGCA+TGG 0.579009 3.1:+76847416 MS.gene06387:CDS
GGTAAGAAAACAGAAGATGA+AGG 0.579076 3.1:+76846631 MS.gene06387:CDS
TAATCGCTTTCCAGTTGTCA+AGG 0.579902 3.1:-76847086 None:intergenic
TAGTAATGTAGAGGAGAAGG+TGG 0.580767 3.1:+76846807 MS.gene06387:CDS
CATGCGAACCTCCCACTGCA+TGG 0.581028 3.1:-76850510 None:intergenic
TCAAATACTCTCCCAGGGAA+GGG 0.581519 3.1:-76848520 None:intergenic
GCATCCTCAGGCAAATCACC+AGG 0.581534 3.1:-76846517 None:intergenic
AGGAAGAGAGACAAGGCAGG+TGG 0.585497 3.1:-76847169 None:intergenic
TGAATACCTTCAATGTGCCA+TGG 0.585774 3.1:-76848571 None:intergenic
TATTGTCCGGGACACTGTTG+AGG 0.586039 3.1:+76850457 MS.gene06387:CDS
CTTCCCATTATTTATGAACG+GGG 0.587916 3.1:+76850189 MS.gene06387:CDS
CTTACCATAGACTCCAACTT+GGG 0.588345 3.1:-76849869 None:intergenic
TGACAACCAATATGGTACAT+TGG 0.589602 3.1:-76849842 None:intergenic
CAAAGACCAGAGTTCAAATG+AGG 0.590021 3.1:+76846891 MS.gene06387:CDS
GTTATACTAGATGTTGGATG+TGG 0.591044 3.1:+76848351 MS.gene06387:CDS
GACCTACTCCAAGGATAAGG+AGG 0.591238 3.1:+76850532 MS.gene06387:CDS
TTCAAGAGTCCTCCAAGACT+GGG 0.592523 3.1:+76847013 MS.gene06387:CDS
GATATGAACTCAATCTATGG+AGG 0.592603 3.1:+76850000 MS.gene06387:CDS
GCTCAGACTGAGCCCCGGAA+GGG 0.594249 3.1:-76846918 None:intergenic
TGGAGGAGATCATACGTCCT+GGG 0.597705 3.1:-76850257 None:intergenic
TTGCTGCTGATAATAAACAC+TGG 0.598168 3.1:+76849908 MS.gene06387:CDS
GTCAAATGTACGGAATGTCA+TGG 0.602207 3.1:+76849978 MS.gene06387:CDS
GTGCACGTTGTAGAGTTCCA+TGG 0.602530 3.1:+76848554 MS.gene06387:CDS
CTAAGCTTGCTGAAGTTAAG+GGG 0.603146 3.1:+76847345 MS.gene06387:CDS
GGAAGAGAGACAAGGCAGGT+GGG 0.603261 3.1:-76847168 None:intergenic
TAATGACCTCAACAGTGTCC+CGG 0.603316 3.1:-76850463 None:intergenic
TGTCAGCTCCGAAGAGAAGT+CGG 0.604687 3.1:+76846558 MS.gene06387:CDS
GCTTACCATAGACTCCAACT+TGG 0.604957 3.1:-76849870 None:intergenic
GAAGGAACAGACTGAGGTGA+GGG 0.605363 3.1:+76846444 MS.gene06387:CDS
GATATAAGCGCTCTATTGAG+TGG 0.606444 3.1:+76847196 MS.gene06387:CDS
TTTGCCTGAGGATGCGACCA+AGG 0.606923 3.1:+76846525 MS.gene06387:CDS
GTTCAATTTGCTCTTGAGAG+GGG 0.608000 3.1:+76848457 MS.gene06387:CDS
TTCAGGAAGAGAGACAAGGC+AGG 0.609303 3.1:-76847172 None:intergenic
GGAACTTGTTTCAATCAGCA+AGG 0.612001 3.1:+76849204 MS.gene06387:CDS
TGGAGCTGAACAGAGTATTG+CGG 0.613676 3.1:+76848991 MS.gene06387:CDS
AACAACAGATAGTAATGTAG+AGG 0.614483 3.1:+76846798 MS.gene06387:CDS
AAATGAGGTATTCCCTTCCG+GGG 0.618479 3.1:+76846906 MS.gene06387:CDS
TGATCGGATCTCAGGCCTGA+AGG 0.618835 3.1:+76850428 MS.gene06387:intron
CCAGTTAGTTCAAGTGAACG+CGG 0.619426 3.1:+76849784 MS.gene06387:CDS
TGAAGGAACAGACTGAGGTG+AGG 0.620122 3.1:+76846443 MS.gene06387:CDS
TGTTGCTCTAGCCTTGATTG+GGG 0.623280 3.1:+76846351 MS.gene06387:CDS
GTGGCCTAAAAGCAGAGAGA+AGG 0.623669 3.1:+76847215 MS.gene06387:CDS
ACACGTGTTATACTAGATGT+TGG 0.623731 3.1:+76848345 MS.gene06387:CDS
CATGGTAAAGTCCATGCAGT+GGG 0.624917 3.1:+76850499 MS.gene06387:CDS
GAATCATTAGCACCTATCCC+AGG 0.627825 3.1:+76850240 MS.gene06387:CDS
GAACTCTACAACGTGCACAA+TGG 0.628195 3.1:-76848549 None:intergenic
TTGAAAAGAGATGATCTGCA+TGG 0.628694 3.1:-76850277 None:intergenic
TAGAAGCTCAGACTGAGCCC+CGG 0.630651 3.1:-76846923 None:intergenic
ACTTCAGCAAGCTTAGTGTG+TGG 0.630986 3.1:-76847338 None:intergenic
CTGCTGTAATGGGCACAAAG+AGG 0.637182 3.1:+76848494 MS.gene06387:CDS
CTGCATCAAATACTCTCCCA+GGG 0.637623 3.1:-76848525 None:intergenic
GAAGTCGGAGGAAAATTCCA+CGG 0.637764 3.1:+76846573 MS.gene06387:CDS
ACTCTGCCTGACATTGCTTG+GGG 0.639154 3.1:+76848315 MS.gene06387:CDS
GAAGATGTTGAAATATGGAA+TGG 0.639298 3.1:+76849065 MS.gene06387:CDS
CCGTTCATAAATAATGGGAA+GGG 0.642519 3.1:-76850187 None:intergenic
CTGATGATCCCAATGCAGCA+TGG 0.648087 3.1:+76849325 MS.gene06387:CDS
AAACTGATAATAGCAATGCT+CGG 0.648882 3.1:+76846479 MS.gene06387:CDS
ATATGAACTCAATCTATGGA+GGG 0.649955 3.1:+76850001 MS.gene06387:CDS
GGTTCGCATGACCTACTCCA+AGG 0.652153 3.1:+76850523 MS.gene06387:CDS
CAAGTGAACGCGGGTCACAG+TGG 0.652261 3.1:+76849794 MS.gene06387:CDS
ACCTACTCCAAGGATAAGGA+GGG 0.652538 3.1:+76850533 MS.gene06387:CDS
AGAGAGACAAGGCAGGTGGG+AGG 0.652823 3.1:-76847165 None:intergenic
TATGTGTCCAGAAGTCCACC+TGG 0.655480 3.1:+76850561 MS.gene06387:CDS
AAAGAATCTGATGAAAACGC+TGG 0.656465 3.1:+76846844 MS.gene06387:CDS
AACAGAGTATTGCGGCCTGG+TGG 0.656543 3.1:+76848999 MS.gene06387:CDS
GGTAAAGTCCATGCAGTGGG+AGG 0.657793 3.1:+76850502 MS.gene06387:CDS
GCATGGTAAAGTCCATGCAG+TGG 0.661920 3.1:+76850498 MS.gene06387:CDS
TAAACGGATTGGGAATTCAG+TGG 0.664896 3.1:+76849956 MS.gene06387:CDS
ACCCTCCTTATCCTTGGAGT+AGG 0.669418 3.1:-76850534 None:intergenic
CGTCTCCTTAGGCCGCCAGG+TGG 0.669645 3.1:-76850576 None:intergenic
CAAGGCATGGGATAAAGTCG+GGG 0.669765 3.1:-76847068 None:intergenic
CAGTTAGTTCAAGTGAACGC+GGG 0.672917 3.1:+76849785 MS.gene06387:CDS
ATCAGCAGCAAAATCTTCAG+GGG 0.674815 3.1:-76849896 None:intergenic
ATCCTTCAGGAAGAGAGACA+AGG 0.675474 3.1:-76847176 None:intergenic
AATAATGGGAAGGGTATCTG+CGG 0.678257 3.1:-76850178 None:intergenic
AAATAACAAAGACAGCGAAG+AGG 0.679636 3.1:+76846666 MS.gene06387:CDS
TGCCTGAGGATGCGACCAAG+GGG 0.680547 3.1:+76846527 MS.gene06387:CDS
TGGAACCCAATTCAAGCATG+GGG 0.686380 3.1:+76847418 MS.gene06387:CDS
TGAGGTGAAGGAACAGACTG+AGG 0.690937 3.1:+76846438 MS.gene06387:CDS
AGATACGAAGACAGAAGACG+AGG 0.694255 3.1:+76846609 MS.gene06387:CDS
AAAAGAGATGATCTGCATGG+AGG 0.700577 3.1:-76850274 None:intergenic
ATCTTCAGAAGACTTCTCCG+TGG 0.710231 3.1:-76846590 None:intergenic
GATACGAAGACAGAAGACGA+GGG 0.710853 3.1:+76846610 MS.gene06387:CDS
GTGTCCAGAAGTCCACCTGG+CGG 0.714703 3.1:+76850564 MS.gene06387:CDS
CAGCTCCGAAGAGAAGTCGG+AGG 0.726526 3.1:+76846561 MS.gene06387:CDS
TAATCCTGGTGATTTGCCTG+AGG 0.728544 3.1:+76846513 MS.gene06387:CDS
GCCTGAGGATGCGACCAAGG+GGG 0.732614 3.1:+76846528 MS.gene06387:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTCTTTTTCTTAAAA+GGG - chr3.1:76847620-76847639 None:intergenic 10.0%
!!! CAAAATATAAATTTCTATTT+TGG - chr3.1:76849452-76849471 None:intergenic 10.0%
!! AACAAGTATAAAAATAAAAC+AGG + chr3.1:76849594-76849613 MS.gene06387:intron 15.0%
!! ACAAGTATAAAAATAAAACA+GGG + chr3.1:76849595-76849614 MS.gene06387:intron 15.0%
!! TGGAATGAAAAAAAATATTA+TGG + chr3.1:76847677-76847696 MS.gene06387:intron 15.0%
!! TTTGAAAGATTTGAATATTT+GGG + chr3.1:76850131-76850150 MS.gene06387:CDS 15.0%
!!! CAATATTAACAGATTTTTAA+AGG - chr3.1:76847659-76847678 None:intergenic 15.0%
!!! CTTTAAAAATCTGTTAATAT+TGG + chr3.1:76847657-76847676 MS.gene06387:intron 15.0%
!!! GAGAAATAACATATAATTTT+AGG - chr3.1:76847294-76847313 None:intergenic 15.0%
!!! GATTTTTTCTTTTTCTTAAA+AGG - chr3.1:76847621-76847640 None:intergenic 15.0%
!! ATTAACAAAATCAATATGCT+GGG + chr3.1:76849183-76849202 MS.gene06387:CDS 20.0%
!! TAACTTGGTATATAAATTGT+AGG + chr3.1:76848676-76848695 MS.gene06387:intron 20.0%
!! TACATTAAAATGCACAAAAA+AGG - chr3.1:76849117-76849136 None:intergenic 20.0%
!! TATCATAATAAAGAGAAACT+TGG - chr3.1:76847777-76847796 None:intergenic 20.0%
!!! AATTTTGATCGTATTCATTT+AGG + chr3.1:76848640-76848659 MS.gene06387:intron 20.0%
!!! ACAAGTTAAACAGAAATTTT+TGG - chr3.1:76847532-76847551 None:intergenic 20.0%
!!! ATCAATATCATGGTAAATTT+TGG - chr3.1:76848128-76848147 None:intergenic 20.0%
!!! CATTTTGTTTGGATTAAATT+TGG + chr3.1:76847475-76847494 MS.gene06387:intron 20.0%
!!! CTTTGAAAGATTTGAATATT+TGG + chr3.1:76850130-76850149 MS.gene06387:CDS 20.0%
!!! GTTTTTGTTACATGTAAATA+AGG - chr3.1:76848941-76848960 None:intergenic 20.0%
!!! TTTTTGGTATATATCATGAT+TGG + chr3.1:76850214-76850233 MS.gene06387:CDS 20.0%
!!! TTTTTTGTGCATTTTAATGT+AGG + chr3.1:76849116-76849135 MS.gene06387:intron 20.0%
! AACCATAATAAAAAGTTTGC+TGG - chr3.1:76850349-76850368 None:intergenic 25.0%
! AATCATGTTAACTAGGATAT+TGG - chr3.1:76848904-76848923 None:intergenic 25.0%
! ATAATACATGTAAATGTCAC+TGG + chr3.1:76848712-76848731 MS.gene06387:intron 25.0%
! ATCTAGTAATCATGTTAACT+AGG - chr3.1:76848911-76848930 None:intergenic 25.0%
! ATGAAGGTAAATCAATATCA+TGG - chr3.1:76848138-76848157 None:intergenic 25.0%
! CATTAACAAAATCAATATGC+TGG + chr3.1:76849182-76849201 MS.gene06387:CDS 25.0%
! TGTAGAAGATCATTTAATGA+AGG - chr3.1:76848154-76848173 None:intergenic 25.0%
! TTTCTCTTTATTATGATACC+TGG + chr3.1:76847779-76847798 MS.gene06387:intron 25.0%
!! AACCAGCAAACTTTTTATTA+TGG + chr3.1:76850344-76850363 MS.gene06387:intron 25.0%
!! ATAAAACAGGGCTTTTTATT+TGG + chr3.1:76849607-76849626 MS.gene06387:intron 25.0%
!!! GTCTTTGTTATTTTCTGTAT+TGG - chr3.1:76846659-76846678 None:intergenic 25.0%
!!! TGTTTGTTATACAGCTATTT+TGG + chr3.1:76848739-76848758 MS.gene06387:intron 25.0%
!!! TTACATTGACTTTATACAAG+AGG + chr3.1:76847448-76847467 MS.gene06387:CDS 25.0%
AAACTGATAATAGCAATGCT+CGG + chr3.1:76846479-76846498 MS.gene06387:CDS 30.0%
AAAGTCATTGAAGAACTTTC+AGG - chr3.1:76847976-76847995 None:intergenic 30.0%
AACAACAGATAGTAATGTAG+AGG + chr3.1:76846798-76846817 MS.gene06387:CDS 30.0%
ATATGAACTCAATCTATGGA+GGG + chr3.1:76850001-76850020 MS.gene06387:CDS 30.0%
ATGGATATGAACTCAATCTA+TGG + chr3.1:76849997-76850016 MS.gene06387:CDS 30.0%
ATGTGCAGTTCATATGTATT+AGG - chr3.1:76848084-76848103 None:intergenic 30.0%
CAAAAACAATTTACAACTGC+AGG + chr3.1:76848954-76848973 MS.gene06387:intron 30.0%
CGTATCTTAATTTCCTCTAT+TGG - chr3.1:76848011-76848030 None:intergenic 30.0%
GAAGATGTTGAAATATGGAA+TGG + chr3.1:76849065-76849084 MS.gene06387:CDS 30.0%
GACTAATTCAGCAATTAACT+CGG - chr3.1:76849475-76849494 None:intergenic 30.0%
GGCATTTATCAATCTTAACT+TGG + chr3.1:76848661-76848680 MS.gene06387:intron 30.0%
TAGAGGAAATTAAGATACGT+TGG + chr3.1:76848012-76848031 MS.gene06387:intron 30.0%
TCAAAATTGGGTGAAAGTTA+CGG + chr3.1:76847370-76847389 MS.gene06387:CDS 30.0%
TCATAACAATCATTGGATAG+TGG - chr3.1:76849267-76849286 None:intergenic 30.0%
TGAAAAGAAAGATGAATCAG+AGG + chr3.1:76846720-76846739 MS.gene06387:CDS 30.0%
TTCCATATTTCAACATCTTC+AGG - chr3.1:76849065-76849084 None:intergenic 30.0%
TTCCTGAAGATGTTGAAATA+TGG + chr3.1:76849060-76849079 MS.gene06387:CDS 30.0%
TTTACAATGTTTACTCGATG+TGG + chr3.1:76848248-76848267 MS.gene06387:intron 30.0%
! AAGTCTTATCTAAACGGATT+GGG + chr3.1:76849946-76849965 MS.gene06387:CDS 30.0%
! TCAATTGTCATTTCATTCTC+TGG + chr3.1:76847254-76847273 MS.gene06387:intron 30.0%
! TCTTTTCAAAGGTTCAGAAA+AGG + chr3.1:76850291-76850310 MS.gene06387:intron 30.0%
! TTTTGCTAATGCTTATTTGG+TGG + chr3.1:76850367-76850386 MS.gene06387:intron 30.0%
!! AAGTTTGCTGGTTATTAATG+TGG - chr3.1:76850337-76850356 None:intergenic 30.0%
!! AGTTTGCTGGTTATTAATGT+GGG - chr3.1:76850336-76850355 None:intergenic 30.0%
!! CAGATTTTTAAAGGCTATAC+TGG - chr3.1:76847650-76847669 None:intergenic 30.0%
!! TGGTTTTGCTAATGCTTATT+TGG + chr3.1:76850364-76850383 MS.gene06387:intron 30.0%
!! TTGTTATACAGCTATTTTGG+TGG + chr3.1:76848742-76848761 MS.gene06387:intron 30.0%
!!! TGTTATACAGCTATTTTGGT+GGG + chr3.1:76848743-76848762 MS.gene06387:intron 30.0%
AAACAATTTACAACTGCAGG+TGG + chr3.1:76848957-76848976 MS.gene06387:intron 35.0%
AAAGAATCTGATGAAAACGC+TGG + chr3.1:76846844-76846863 MS.gene06387:CDS 35.0%
AAAGTTTGTAATGTTACCGC+TGG + chr3.1:76847045-76847064 MS.gene06387:CDS 35.0%
AAATAACAAAGACAGCGAAG+AGG + chr3.1:76846666-76846685 MS.gene06387:CDS 35.0%
AAGACCCCGTTCATAAATAA+TGG - chr3.1:76850196-76850215 None:intergenic 35.0%
AATGAAACTACGACACAAAC+TGG + chr3.1:76846946-76846965 MS.gene06387:CDS 35.0%
ACAAACAATTTCTTCACTCC+AGG - chr3.1:76847800-76847819 None:intergenic 35.0%
ACACGTGTTATACTAGATGT+TGG + chr3.1:76848345-76848364 MS.gene06387:CDS 35.0%
ACTTCTTCTGATAAAGAAGC+TGG - chr3.1:76848179-76848198 None:intergenic 35.0%
AGAAAACACCATGTCAGTTA+AGG - chr3.1:76849359-76849378 None:intergenic 35.0%
AGACCCCGTTCATAAATAAT+GGG - chr3.1:76850195-76850214 None:intergenic 35.0%
AGATAGTAATGTAGAGGAGA+AGG + chr3.1:76846804-76846823 MS.gene06387:CDS 35.0%
AGCAGAGTCAAAGAATGAAA+AGG + chr3.1:76846987-76847006 MS.gene06387:CDS 35.0%
ATCAGCAAGGATCAAGTTAA+TGG + chr3.1:76849217-76849236 MS.gene06387:intron 35.0%
ATCTTGTTGATCTAAGCTTG+TGG + chr3.1:76847725-76847744 MS.gene06387:intron 35.0%
CAAAATTGGGTGAAAGTTAC+GGG + chr3.1:76847371-76847390 MS.gene06387:CDS 35.0%
CAATCCGTTTAGATAAGACT+TGG - chr3.1:76849947-76849966 None:intergenic 35.0%
CATTGTAATACCATATCTGC+AGG - chr3.1:76847316-76847335 None:intergenic 35.0%
CCCTTCCCATTATTTATGAA+CGG + chr3.1:76850187-76850206 MS.gene06387:CDS 35.0%
CCTTCCCATTATTTATGAAC+GGG + chr3.1:76850188-76850207 MS.gene06387:CDS 35.0%
CTTCCCATTATTTATGAACG+GGG + chr3.1:76850189-76850208 MS.gene06387:CDS 35.0%
GAATTCAGTGGTCAAATGTA+CGG + chr3.1:76849968-76849987 MS.gene06387:CDS 35.0%
GATATGAACTCAATCTATGG+AGG + chr3.1:76850000-76850019 MS.gene06387:CDS 35.0%
GGTAAGAAAACAGAAGATGA+AGG + chr3.1:76846631-76846650 MS.gene06387:CDS 35.0%
GTTATACTAGATGTTGGATG+TGG + chr3.1:76848351-76848370 MS.gene06387:CDS 35.0%
TAATTTCCTCTATTGGCAGT+TGG - chr3.1:76848004-76848023 None:intergenic 35.0%
TATCAGCAGCAAAATCTTCA+GGG - chr3.1:76849900-76849919 None:intergenic 35.0%
TATTCCTTCCTTAACTGACA+TGG + chr3.1:76849348-76849367 MS.gene06387:intron 35.0%
TCAGGAAGCTTCTGATAAAT+AGG - chr3.1:76849047-76849066 None:intergenic 35.0%
TCGTTGCTCATAACAATCAT+TGG - chr3.1:76849274-76849293 None:intergenic 35.0%
TCTTGTTGATCTAAGCTTGT+GGG + chr3.1:76847726-76847745 MS.gene06387:intron 35.0%
TGACAACCAATATGGTACAT+TGG - chr3.1:76849845-76849864 None:intergenic 35.0%
TGCATCATCAAAGCTCTATT+AGG - chr3.1:76848294-76848313 None:intergenic 35.0%
TGCTGTGTAATTCAAACACA+TGG - chr3.1:76848843-76848862 None:intergenic 35.0%
TGTGACAACTTGACAAGTTA+GGG - chr3.1:76847597-76847616 None:intergenic 35.0%
TTATCAGCAGCAAAATCTTC+AGG - chr3.1:76849901-76849920 None:intergenic 35.0%
TTGAAAAGAGATGATCTGCA+TGG - chr3.1:76850280-76850299 None:intergenic 35.0%
TTGCTGCTGATAATAAACAC+TGG + chr3.1:76849908-76849927 MS.gene06387:CDS 35.0%
! ATTTATGAACGGGGTCTTTT+TGG + chr3.1:76850198-76850217 MS.gene06387:CDS 35.0%
! CAAGTCTTATCTAAACGGAT+TGG + chr3.1:76849945-76849964 MS.gene06387:CDS 35.0%
! CCGTTCATAAATAATGGGAA+GGG - chr3.1:76850190-76850209 None:intergenic 35.0%
! GTGTCCAAGTCTTATCTAAA+CGG + chr3.1:76849940-76849959 MS.gene06387:CDS 35.0%
! TCATCAGATTTTTGACACAG+TGG - chr3.1:76849312-76849331 None:intergenic 35.0%
! TGCAGATCATCTCTTTTCAA+AGG + chr3.1:76850280-76850299 MS.gene06387:CDS 35.0%
!! AAGTTAAGGGGCATCAAAAT+TGG + chr3.1:76847357-76847376 MS.gene06387:CDS 35.0%
!! ACTAAGCTTGCTGAAGTTAA+GGG + chr3.1:76847344-76847363 MS.gene06387:CDS 35.0%
!! AGTTAAGGGGCATCAAAATT+GGG + chr3.1:76847358-76847377 MS.gene06387:CDS 35.0%
!! CAAGAGGTATGCATTTTGTT+TGG + chr3.1:76847464-76847483 MS.gene06387:intron 35.0%
!! GGGAAATATTCTAGAGTAGA+CGG + chr3.1:76846283-76846302 MS.gene06387:CDS 35.0%
!! TGTTATTTCTCCTGCAGATA+TGG + chr3.1:76847303-76847322 MS.gene06387:intron 35.0%
!! TTAACCTTCTCTCTGCTTTT+AGG - chr3.1:76847222-76847241 None:intergenic 35.0%
!! TTTTAAAGGCTATACTGGTG+CGG - chr3.1:76847645-76847664 None:intergenic 35.0%
!!! GTTATACAGCTATTTTGGTG+GGG + chr3.1:76848744-76848763 MS.gene06387:intron 35.0%
AAAAGAGATGATCTGCATGG+AGG - chr3.1:76850277-76850296 None:intergenic 40.0%
AAAGGATGAACATGAAGCTC+AGG + chr3.1:76848435-76848454 MS.gene06387:intron 40.0%
AACACCATGTCAGTTAAGGA+AGG - chr3.1:76849355-76849374 None:intergenic 40.0%
AAGGAATACCATGCTGCATT+GGG - chr3.1:76849336-76849355 None:intergenic 40.0%
AGTCTAATCTCTGATGTGAC+AGG + chr3.1:76849728-76849747 MS.gene06387:intron 40.0%
ATATGAACTGCACATCTGTG+AGG + chr3.1:76848089-76848108 MS.gene06387:intron 40.0%
ATCAGCAGCAAAATCTTCAG+GGG - chr3.1:76849899-76849918 None:intergenic 40.0%
CAAAGACCAGAGTTCAAATG+AGG + chr3.1:76846891-76846910 MS.gene06387:CDS 40.0%
CAAGGATCAAGTTAATGGAG+TGG + chr3.1:76849222-76849241 MS.gene06387:intron 40.0%
CAATCGGTAGATGTCAAACA+CGG - chr3.1:76850089-76850108 None:intergenic 40.0%
CACTTAGTAGGATAAGGCTT+GGG - chr3.1:76849398-76849417 None:intergenic 40.0%
CCTGCTATATCTGCTGTAAT+GGG + chr3.1:76848484-76848503 MS.gene06387:CDS 40.0%
CTGAAGGAAAGCTTATTGTC+CGG + chr3.1:76850444-76850463 MS.gene06387:CDS 40.0%
CTTACCATAGACTCCAACTT+GGG - chr3.1:76849872-76849891 None:intergenic 40.0%
GACCATACAAAAAAACCACC+AGG - chr3.1:76849017-76849036 None:intergenic 40.0%
GATATAAGCGCTCTATTGAG+TGG + chr3.1:76847196-76847215 MS.gene06387:CDS 40.0%
GGAATACCTCATTTGAACTC+TGG - chr3.1:76846900-76846919 None:intergenic 40.0%
GGAGAGTAAAAATGAGGTGA+AGG + chr3.1:76846426-76846445 MS.gene06387:CDS 40.0%
GTCAAATGTACGGAATGTCA+TGG + chr3.1:76849978-76849997 MS.gene06387:CDS 40.0%
GTGTGACAACTTGACAAGTT+AGG - chr3.1:76847598-76847617 None:intergenic 40.0%
TAACAAACCCTCCTTATCCT+TGG - chr3.1:76850543-76850562 None:intergenic 40.0%
TAATCGCTTTCCAGTTGTCA+AGG - chr3.1:76847089-76847108 None:intergenic 40.0%
TAGTAATGTAGAGGAGAAGG+TGG + chr3.1:76846807-76846826 MS.gene06387:CDS 40.0%
TCCTGCTATATCTGCTGTAA+TGG + chr3.1:76848483-76848502 MS.gene06387:CDS 40.0%
TGAAGGAAAGCTTATTGTCC+GGG + chr3.1:76850445-76850464 MS.gene06387:CDS 40.0%
TGAATACCTTCAATGTGCCA+TGG - chr3.1:76848574-76848593 None:intergenic 40.0%
TGAGCTTCATGTTCATCCTT+TGG - chr3.1:76848436-76848455 None:intergenic 40.0%
TGGGAACTTGACAACCAATA+TGG - chr3.1:76849853-76849872 None:intergenic 40.0%
TTGACAACTGGAAAGCGATT+AGG + chr3.1:76847088-76847107 MS.gene06387:CDS 40.0%
TTTCAAAGCTGCAGCAAATC+TGG - chr3.1:76850118-76850137 None:intergenic 40.0%
TTTCCAATTGTACCCAGTCT+TGG - chr3.1:76847028-76847047 None:intergenic 40.0%
TTTGTCCTGTTGTGCGTAAA+CGG - chr3.1:76848060-76848079 None:intergenic 40.0%
! AACTGGATCGTTTTCTACAC+AGG + chr3.1:76846963-76846982 MS.gene06387:CDS 40.0%
! AGGTTCAATTTGCTCTTGAG+AGG + chr3.1:76848455-76848474 MS.gene06387:intron 40.0%
! ATAGAGCGCTTATATCCTTC+AGG - chr3.1:76847192-76847211 None:intergenic 40.0%
! ATTTTCCTCCGACTTCTCTT+CGG - chr3.1:76846569-76846588 None:intergenic 40.0%
! CAAGCCTTATCCTACTAAGT+GGG + chr3.1:76849397-76849416 MS.gene06387:intron 40.0%
! CCCGTTCATAAATAATGGGA+AGG - chr3.1:76850191-76850210 None:intergenic 40.0%
! CTCATTTGAACTCTGGTCTT+TGG - chr3.1:76846893-76846912 None:intergenic 40.0%
! GGAACTTGTTTCAATCAGCA+AGG + chr3.1:76849204-76849223 MS.gene06387:CDS 40.0%
! GGATAGTGGCTTCTTGTATA+TGG - chr3.1:76849253-76849272 None:intergenic 40.0%
! GGTTCAATTTGCTCTTGAGA+GGG + chr3.1:76848456-76848475 MS.gene06387:intron 40.0%
! GTTCAATTTGCTCTTGAGAG+GGG + chr3.1:76848457-76848476 MS.gene06387:CDS 40.0%
! TCAAATGAGGTATTCCCTTC+CGG + chr3.1:76846904-76846923 MS.gene06387:CDS 40.0%
! TCAGATTTTTGACACAGTGG+AGG - chr3.1:76849309-76849328 None:intergenic 40.0%
! TGCAGGTGGTAAACTTCTTT+TGG + chr3.1:76848971-76848990 MS.gene06387:intron 40.0%
! TGTTTGACATCTACCGATTG+TGG + chr3.1:76850089-76850108 MS.gene06387:intron 40.0%
! TTCAATTTGCTCTTGAGAGG+GGG + chr3.1:76848458-76848477 MS.gene06387:CDS 40.0%
!! AACAGGGCTTTTTATTTGGC+TGG + chr3.1:76849611-76849630 MS.gene06387:intron 40.0%
!! AATAATGGGAAGGGTATCTG+CGG - chr3.1:76850181-76850200 None:intergenic 40.0%
!! CACTAAGCTTGCTGAAGTTA+AGG + chr3.1:76847343-76847362 MS.gene06387:CDS 40.0%
!! CTAAGCTTGCTGAAGTTAAG+GGG + chr3.1:76847345-76847364 MS.gene06387:CDS 40.0%
!! GAGTATCTTACTTTTCCTGG+TGG + chr3.1:76847395-76847414 MS.gene06387:CDS 40.0%
!! GGTGAGTATCTTACTTTTCC+TGG + chr3.1:76847392-76847411 MS.gene06387:CDS 40.0%
!! TAAACGGATTGGGAATTCAG+TGG + chr3.1:76849956-76849975 MS.gene06387:CDS 40.0%
!! TATCTTACTTTTCCTGGTGG+TGG + chr3.1:76847398-76847417 MS.gene06387:CDS 40.0%
!! TCACTTTTCCAAGACAGGAA+GGG - chr3.1:76849559-76849578 None:intergenic 40.0%
!! TTGTTGCTCTAGCCTTGATT+GGG + chr3.1:76846350-76846369 MS.gene06387:CDS 40.0%
!! TTTGTTGCTCTAGCCTTGAT+TGG + chr3.1:76846349-76846368 MS.gene06387:CDS 40.0%
AAGTGCCCCATGCTTGAATT+GGG - chr3.1:76847426-76847445 None:intergenic 45.0%
ACAGTTTAGACCGAACTGGT+AGG + chr3.1:76847860-76847879 MS.gene06387:intron 45.0%
ACCTACTCCAAGGATAAGGA+GGG + chr3.1:76850533-76850552 MS.gene06387:CDS 45.0%
ACTGCATCAAATACTCTCCC+AGG - chr3.1:76848529-76848548 None:intergenic 45.0%
ACTTCAGCAAGCTTAGTGTG+TGG - chr3.1:76847341-76847360 None:intergenic 45.0%
AGAGTTCCATGGCACATTGA+AGG + chr3.1:76848565-76848584 MS.gene06387:CDS 45.0%
AGATACGAAGACAGAAGACG+AGG + chr3.1:76846609-76846628 MS.gene06387:CDS 45.0%
AGTTGGAGTCTATGGTAAGC+CGG + chr3.1:76849873-76849892 MS.gene06387:CDS 45.0%
ATATGGTACATTGGTCAGCC+TGG - chr3.1:76849836-76849855 None:intergenic 45.0%
ATCAAATACTCTCCCAGGGA+AGG - chr3.1:76848524-76848543 None:intergenic 45.0%
ATCCTTCAGGAAGAGAGACA+AGG - chr3.1:76847179-76847198 None:intergenic 45.0%
ATCTTCAGAAGACTTCTCCG+TGG - chr3.1:76846593-76846612 None:intergenic 45.0%
ATTCAAGAGTCCTCCAAGAC+TGG + chr3.1:76847012-76847031 MS.gene06387:CDS 45.0%
CAGTTAGTTCAAGTGAACGC+GGG + chr3.1:76849785-76849804 MS.gene06387:CDS 45.0%
CATCATCCAAACCCCAATCA+AGG - chr3.1:76846365-76846384 None:intergenic 45.0%
CATGACCTACTCCAAGGATA+AGG + chr3.1:76850529-76850548 MS.gene06387:CDS 45.0%
CATGGTAAAGTCCATGCAGT+GGG + chr3.1:76850499-76850518 MS.gene06387:CDS 45.0%
CATTAACGAGCTTGAGAGCA+TGG + chr3.1:76850481-76850500 MS.gene06387:CDS 45.0%
CCACTTAGTAGGATAAGGCT+TGG - chr3.1:76849399-76849418 None:intergenic 45.0%
CCAGTTAGTTCAAGTGAACG+CGG + chr3.1:76849784-76849803 MS.gene06387:CDS 45.0%
CCCATTACAGCAGATATAGC+AGG - chr3.1:76848487-76848506 None:intergenic 45.0%
CCTTATCCTACTAAGTGGGT+CGG + chr3.1:76849401-76849420 MS.gene06387:intron 45.0%
CGGACAATAAGCTTTCCTTC+AGG - chr3.1:76850446-76850465 None:intergenic 45.0%
CGGCAGTTTGAAGATAATCC+TGG + chr3.1:76846499-76846518 MS.gene06387:CDS 45.0%
CTGCATCAAATACTCTCCCA+GGG - chr3.1:76848528-76848547 None:intergenic 45.0%
CTTCCTGTCTTGGAAAAGTG+AGG + chr3.1:76849558-76849577 MS.gene06387:intron 45.0%
CTTTCCAGTTGTCAAGGCAT+GGG - chr3.1:76847083-76847102 None:intergenic 45.0%
GAACTCTACAACGTGCACAA+TGG - chr3.1:76848552-76848571 None:intergenic 45.0%
GAAGGAATACCATGCTGCAT+TGG - chr3.1:76849337-76849356 None:intergenic 45.0%
GAAGTCGGAGGAAAATTCCA+CGG + chr3.1:76846573-76846592 MS.gene06387:CDS 45.0%
GAATCATTAGCACCTATCCC+AGG + chr3.1:76850240-76850259 MS.gene06387:CDS 45.0%
GATACGAAGACAGAAGACGA+GGG + chr3.1:76846610-76846629 MS.gene06387:CDS 45.0%
GCAAATCTGGAAGCCACAAT+CGG - chr3.1:76850105-76850124 None:intergenic 45.0%
GCTTACCATAGACTCCAACT+TGG - chr3.1:76849873-76849892 None:intergenic 45.0%
GGAAAGCGATTAGGAGTCTT+CGG + chr3.1:76847097-76847116 MS.gene06387:CDS 45.0%
GGCTGACCAATGTACCATAT+TGG + chr3.1:76849836-76849855 MS.gene06387:CDS 45.0%
GTCAAGGCATGGGATAAAGT+CGG - chr3.1:76847073-76847092 None:intergenic 45.0%
GTGGAACCCAATTCAAGCAT+GGG + chr3.1:76847417-76847436 MS.gene06387:CDS 45.0%
TAATGACCTCAACAGTGTCC+CGG - chr3.1:76850466-76850485 None:intergenic 45.0%
TACCAGTTCGGTCTAAACTG+TGG - chr3.1:76847861-76847880 None:intergenic 45.0%
TCAAATACTCTCCCAGGGAA+GGG - chr3.1:76848523-76848542 None:intergenic 45.0%
TCAAGGCATGGGATAAAGTC+GGG - chr3.1:76847072-76847091 None:intergenic 45.0%
TCTGTACCAACTGCCAATAG+AGG + chr3.1:76847995-76848014 MS.gene06387:intron 45.0%
TGGAACCCAATTCAAGCATG+GGG + chr3.1:76847418-76847437 MS.gene06387:CDS 45.0%
TGGTTGTCAAGTTCCCAAGT+TGG + chr3.1:76849856-76849875 MS.gene06387:CDS 45.0%
TTAGACCGAACTGGTAGGAA+TGG + chr3.1:76847865-76847884 MS.gene06387:intron 45.0%
TTATCCCATGCCTTGACAAC+TGG + chr3.1:76847076-76847095 MS.gene06387:CDS 45.0%
TTCAAGAGTCCTCCAAGACT+GGG + chr3.1:76847013-76847032 MS.gene06387:CDS 45.0%
TTCTGTAGTTCCCGTGCAAA+AGG + chr3.1:76846393-76846412 MS.gene06387:CDS 45.0%
TTGTCCTGTTGTGCGTAAAC+GGG - chr3.1:76848059-76848078 None:intergenic 45.0%
! AAATGAGGTATTCCCTTCCG+GGG + chr3.1:76846906-76846925 MS.gene06387:CDS 45.0%
! ACTTTTCCAAGACAGGAAGG+GGG - chr3.1:76849557-76849576 None:intergenic 45.0%
! AGTTCCCAAGTTGGAGTCTA+TGG + chr3.1:76849865-76849884 MS.gene06387:CDS 45.0%
! ATGTGCCATTCCTACCAGTT+CGG - chr3.1:76847873-76847892 None:intergenic 45.0%
! CAAATGAGGTATTCCCTTCC+GGG + chr3.1:76846905-76846924 MS.gene06387:CDS 45.0%
! CACTTTTCCAAGACAGGAAG+GGG - chr3.1:76849558-76849577 None:intergenic 45.0%
! CAGATGCAATCTAGCTTCTC+TGG + chr3.1:76850395-76850414 MS.gene06387:intron 45.0%
! CCAAGCCTTATCCTACTAAG+TGG + chr3.1:76849396-76849415 MS.gene06387:intron 45.0%
! GCAATGTCACTTGCAACCAA+AGG + chr3.1:76848417-76848436 MS.gene06387:intron 45.0%
! TAATCCTGGTGATTTGCCTG+AGG + chr3.1:76846513-76846532 MS.gene06387:CDS 45.0%
!! ACCTCATTTTTACTCTCCCG+AGG - chr3.1:76846424-76846443 None:intergenic 45.0%
!! AGGGCTTTTTATTTGGCTGG+AGG + chr3.1:76849614-76849633 MS.gene06387:intron 45.0%
!! CTCACTTTTCCAAGACAGGA+AGG - chr3.1:76849560-76849579 None:intergenic 45.0%
!! GTTCCTCACTTTTCCAAGAC+AGG - chr3.1:76849564-76849583 None:intergenic 45.0%
!! TGGAGCTGAACAGAGTATTG+CGG + chr3.1:76848991-76849010 MS.gene06387:CDS 45.0%
!! TGTTGCTCTAGCCTTGATTG+GGG + chr3.1:76846351-76846370 MS.gene06387:CDS 45.0%
!!! ATACAGCTATTTTGGTGGGG+TGG + chr3.1:76848747-76848766 MS.gene06387:intron 45.0%
!!! GGCCTGGTGGTTTTTTTGTA+TGG + chr3.1:76849012-76849031 MS.gene06387:CDS 45.0%
!!! TACAGCTATTTTGGTGGGGT+GGG + chr3.1:76848748-76848767 MS.gene06387:intron 45.0%
AAAGAGAAAGCCTCCGAAGC+TGG - chr3.1:76848382-76848401 None:intergenic 50.0%
ACATAGCCGACCCACTTAGT+AGG - chr3.1:76849410-76849429 None:intergenic 50.0%
ACCCTCCTTATCCTTGGAGT+AGG - chr3.1:76850537-76850556 None:intergenic 50.0%
ACTCTGCCTGACATTGCTTG+GGG + chr3.1:76848315-76848334 MS.gene06387:CDS 50.0%
AGACTCTGCCTGACATTGCT+TGG + chr3.1:76848313-76848332 MS.gene06387:intron 50.0%
CAAGGCATGGGATAAAGTCG+GGG - chr3.1:76847071-76847090 None:intergenic 50.0%
CCAATTGTACCCAGTCTTGG+AGG - chr3.1:76847025-76847044 None:intergenic 50.0%
CCGACCCACTTAGTAGGATA+AGG - chr3.1:76849404-76849423 None:intergenic 50.0%
CCGCGTTCACTTGAACTAAC+TGG - chr3.1:76849787-76849806 None:intergenic 50.0%
CCTCCAAGACTGGGTACAAT+TGG + chr3.1:76847022-76847041 MS.gene06387:CDS 50.0%
CGGTAGATGTCAAACACGGA+AGG - chr3.1:76850085-76850104 None:intergenic 50.0%
CTGATGATCCCAATGCAGCA+TGG + chr3.1:76849325-76849344 MS.gene06387:CDS 50.0%
GAAGGAACAGACTGAGGTGA+GGG + chr3.1:76846444-76846463 MS.gene06387:CDS 50.0%
GACCTACTCCAAGGATAAGG+AGG + chr3.1:76850532-76850551 MS.gene06387:CDS 50.0%
GACTCTGCCTGACATTGCTT+GGG + chr3.1:76848314-76848333 MS.gene06387:intron 50.0%
GCATGGTAAAGTCCATGCAG+TGG + chr3.1:76850498-76850517 MS.gene06387:CDS 50.0%
GCCTCGGGAGAGTAAAAATG+AGG + chr3.1:76846420-76846439 MS.gene06387:CDS 50.0%
GCTTTCCAGTTGTCAAGGCA+TGG - chr3.1:76847084-76847103 None:intergenic 50.0%
GGTGGAACCCAATTCAAGCA+TGG + chr3.1:76847416-76847435 MS.gene06387:CDS 50.0%
GTGCACGTTGTAGAGTTCCA+TGG + chr3.1:76848554-76848573 MS.gene06387:CDS 50.0%
GTGGCCTAAAAGCAGAGAGA+AGG + chr3.1:76847215-76847234 MS.gene06387:CDS 50.0%
TACTAAGTGGGTCGGCTATG+TGG + chr3.1:76849409-76849428 MS.gene06387:intron 50.0%
TATGTGTCCAGAAGTCCACC+TGG + chr3.1:76850561-76850580 MS.gene06387:CDS 50.0%
TATTGTCCGGGACACTGTTG+AGG + chr3.1:76850457-76850476 MS.gene06387:CDS 50.0%
TGAAGGAACAGACTGAGGTG+AGG + chr3.1:76846443-76846462 MS.gene06387:CDS 50.0%
TGAGGTGAAGGAACAGACTG+AGG + chr3.1:76846438-76846457 MS.gene06387:CDS 50.0%
TGCCACAGTTTAGACCGAAC+TGG + chr3.1:76847856-76847875 MS.gene06387:intron 50.0%
TGCCTTGTCTCTCTTCCTGA+AGG + chr3.1:76847174-76847193 MS.gene06387:CDS 50.0%
TGTCAGCTCCGAAGAGAAGT+CGG + chr3.1:76846558-76846577 MS.gene06387:CDS 50.0%
TGTCCTGTTGTGCGTAAACG+GGG - chr3.1:76848058-76848077 None:intergenic 50.0%
TTCAGGAAGAGAGACAAGGC+AGG - chr3.1:76847175-76847194 None:intergenic 50.0%
TTCTTACCCCCTTCCTGTCT+TGG + chr3.1:76849548-76849567 MS.gene06387:intron 50.0%
TTGAATTGGGTTCCACCACC+AGG - chr3.1:76847413-76847432 None:intergenic 50.0%
TTGAGTGTCTCCGTCTCCTT+AGG - chr3.1:76850590-76850609 None:intergenic 50.0%
! CTCTGGTAGCTGAGGTTGAT+CGG + chr3.1:76850412-76850431 MS.gene06387:intron 50.0%
! GAAGTGCCCCATGCTTGAAT+TGG - chr3.1:76847427-76847446 None:intergenic 50.0%
! TCTAGCTTCTCTGGTAGCTG+AGG + chr3.1:76850404-76850423 MS.gene06387:intron 50.0%
! TTTTGGTGGGGTGGGTATGT+TGG + chr3.1:76848756-76848775 MS.gene06387:intron 50.0%
!! CTCTAGCCTTGATTGGGGTT+TGG + chr3.1:76846356-76846375 MS.gene06387:CDS 50.0%
!! CTGCTGTAATGGGCACAAAG+AGG + chr3.1:76848494-76848513 MS.gene06387:CDS 50.0%
ACAAAGAGGCTTCCCTTCCC+TGG + chr3.1:76848508-76848527 MS.gene06387:CDS 55.0%
ACAGACTGAGGTGAGGGAAC+AGG + chr3.1:76846450-76846469 MS.gene06387:CDS 55.0%
ACTGCACATCTGTGAGGCAC+TGG + chr3.1:76848095-76848114 MS.gene06387:intron 55.0%
AGGAAGAGAGACAAGGCAGG+TGG - chr3.1:76847172-76847191 None:intergenic 55.0%
CAAAGAGGCTTCCCTTCCCT+GGG + chr3.1:76848509-76848528 MS.gene06387:CDS 55.0%
CGTTTGCCCCAAGCAATGTC+AGG - chr3.1:76848324-76848343 None:intergenic 55.0%
GCAGCAAAATCTTCAGGGGC+CGG - chr3.1:76849895-76849914 None:intergenic 55.0%
GCATCCTCAGGCAAATCACC+AGG - chr3.1:76846520-76846539 None:intergenic 55.0%
GCTGACATTGCTATCCCCCT+TGG - chr3.1:76846545-76846564 None:intergenic 55.0%
GCTTGTGGGAAGCAGCTCAT+AGG + chr3.1:76847740-76847759 MS.gene06387:intron 55.0%
GGAAGAGAGACAAGGCAGGT+GGG - chr3.1:76847171-76847190 None:intergenic 55.0%
GGATGTGGAGTTGCCAGCTT+CGG + chr3.1:76848366-76848385 MS.gene06387:CDS 55.0%
GGTAAAGTCCATGCAGTGGG+AGG + chr3.1:76850502-76850521 MS.gene06387:CDS 55.0%
GGTCACAGTGGCCAGAAAAG+TGG + chr3.1:76849806-76849825 MS.gene06387:CDS 55.0%
GGTTCGCATGACCTACTCCA+AGG + chr3.1:76850523-76850542 MS.gene06387:CDS 55.0%
TAGAAGCTCAGACTGAGCCC+CGG - chr3.1:76846926-76846945 None:intergenic 55.0%
TGATCGGATCTCAGGCCTGA+AGG + chr3.1:76850428-76850447 MS.gene06387:intron 55.0%
TTGCCTGAGGATGCGACCAA+GGG + chr3.1:76846526-76846545 MS.gene06387:CDS 55.0%
TTGTGCGTAAACGGGGAGGA+GGG - chr3.1:76848051-76848070 None:intergenic 55.0%
TTTGCCTGAGGATGCGACCA+AGG + chr3.1:76846525-76846544 MS.gene06387:CDS 55.0%
! GCTGAGGTTGATCGGATCTC+AGG + chr3.1:76850420-76850439 MS.gene06387:intron 55.0%
!! AACAGAGTATTGCGGCCTGG+TGG + chr3.1:76848999-76849018 MS.gene06387:CDS 55.0%
!! CAGCGAAGAGGCGTCTACTA+AGG + chr3.1:76846678-76846697 MS.gene06387:CDS 55.0%
!! CTGAACAGAGTATTGCGGCC+TGG + chr3.1:76848996-76849015 MS.gene06387:CDS 55.0%
AGAGAGACAAGGCAGGTGGG+AGG - chr3.1:76847168-76847187 None:intergenic 60.0%
AGGCAGGTGGGAGGTTCTTC+AGG - chr3.1:76847159-76847178 None:intergenic 60.0%
CAAGTGAACGCGGGTCACAG+TGG + chr3.1:76849794-76849813 MS.gene06387:CDS 60.0%
CAGCTCCGAAGAGAAGTCGG+AGG + chr3.1:76846561-76846580 MS.gene06387:CDS 60.0%
CATGCGAACCTCCCACTGCA+TGG - chr3.1:76850513-76850532 None:intergenic 60.0%
CCGTGCAAAAGGTCGTGCCT+CGG + chr3.1:76846404-76846423 MS.gene06387:CDS 60.0%
CCTCCCCGTTTACGCACAAC+AGG + chr3.1:76848052-76848071 MS.gene06387:intron 60.0%
CCTGTTGTGCGTAAACGGGG+AGG - chr3.1:76848055-76848074 None:intergenic 60.0%
CGTGCAAAAGGTCGTGCCTC+GGG + chr3.1:76846405-76846424 MS.gene06387:CDS 60.0%
GGTACATTGGTCAGCCTGGC+TGG - chr3.1:76849832-76849851 None:intergenic 60.0%
GTGTCCAGAAGTCCACCTGG+CGG + chr3.1:76850564-76850583 MS.gene06387:CDS 60.0%
GTTGTGCGTAAACGGGGAGG+AGG - chr3.1:76848052-76848071 None:intergenic 60.0%
TGCCTGAGGATGCGACCAAG+GGG + chr3.1:76846527-76846546 MS.gene06387:CDS 60.0%
TGGGATAAAGTCGGGGCCAG+CGG - chr3.1:76847064-76847083 None:intergenic 60.0%
TGTGCGTAAACGGGGAGGAG+GGG - chr3.1:76848050-76848069 None:intergenic 60.0%
TGTGGAGTTGCCAGCTTCGG+AGG + chr3.1:76848369-76848388 MS.gene06387:CDS 60.0%
! CCGAGGCACGACCTTTTGCA+CGG - chr3.1:76846407-76846426 None:intergenic 60.0%
! CGAGGCACGACCTTTTGCAC+GGG - chr3.1:76846406-76846425 None:intergenic 60.0%
!!! AGCCTGGCTGGCCACTTTTC+TGG - chr3.1:76849820-76849839 None:intergenic 60.0%
AGCTCAGACTGAGCCCCGGA+AGG - chr3.1:76846922-76846941 None:intergenic 65.0%
CACCTGGCGGCCTAAGGAGA+CGG + chr3.1:76850577-76850596 MS.gene06387:CDS 65.0%
GAAGTCCACCTGGCGGCCTA+AGG + chr3.1:76850571-76850590 MS.gene06387:CDS 65.0%
GCCTGAGGATGCGACCAAGG+GGG + chr3.1:76846528-76846547 MS.gene06387:CDS 65.0%
GCTCAGACTGAGCCCCGGAA+GGG - chr3.1:76846921-76846940 None:intergenic 65.0%
GGCCAGAAAAGTGGCCAGCC+AGG + chr3.1:76849815-76849834 MS.gene06387:CDS 65.0%
GTGCGTAAACGGGGAGGAGG+GGG - chr3.1:76848049-76848068 None:intergenic 65.0%
TCCCCCTTGGTCGCATCCTC+AGG - chr3.1:76846532-76846551 None:intergenic 65.0%
TGCGTAAACGGGGAGGAGGG+GGG - chr3.1:76848048-76848067 None:intergenic 65.0%
! TAGGCCGCCAGGTGGACTTC+TGG - chr3.1:76850571-76850590 None:intergenic 65.0%
CGTCTCCTTAGGCCGCCAGG+TGG - chr3.1:76850579-76850598 None:intergenic 70.0%
CTCCGTCTCCTTAGGCCGCC+AGG - chr3.1:76850582-76850601 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 76846274 76850625 76846274 ID=MS.gene06387
chr3.1 mRNA 76846274 76850625 76846274 ID=MS.gene06387.t1;Parent=MS.gene06387
chr3.1 exon 76846274 76847236 76846274 ID=MS.gene06387.t1.exon1;Parent=MS.gene06387.t1
chr3.1 CDS 76846274 76847236 76846274 ID=cds.MS.gene06387.t1;Parent=MS.gene06387.t1
chr3.1 exon 76847320 76847469 76847320 ID=MS.gene06387.t1.exon2;Parent=MS.gene06387.t1
chr3.1 CDS 76847320 76847469 76847320 ID=cds.MS.gene06387.t1;Parent=MS.gene06387.t1
chr3.1 exon 76848315 76848410 76848315 ID=MS.gene06387.t1.exon3;Parent=MS.gene06387.t1
chr3.1 CDS 76848315 76848410 76848315 ID=cds.MS.gene06387.t1;Parent=MS.gene06387.t1
chr3.1 exon 76848457 76848586 76848457 ID=MS.gene06387.t1.exon4;Parent=MS.gene06387.t1
chr3.1 CDS 76848457 76848586 76848457 ID=cds.MS.gene06387.t1;Parent=MS.gene06387.t1
chr3.1 exon 76848976 76849086 76848976 ID=MS.gene06387.t1.exon5;Parent=MS.gene06387.t1
chr3.1 CDS 76848976 76849086 76848976 ID=cds.MS.gene06387.t1;Parent=MS.gene06387.t1
chr3.1 exon 76849173 76849231 76849173 ID=MS.gene06387.t1.exon6;Parent=MS.gene06387.t1
chr3.1 CDS 76849173 76849231 76849173 ID=cds.MS.gene06387.t1;Parent=MS.gene06387.t1
chr3.1 exon 76849261 76849346 76849261 ID=MS.gene06387.t1.exon7;Parent=MS.gene06387.t1
chr3.1 CDS 76849261 76849346 76849261 ID=cds.MS.gene06387.t1;Parent=MS.gene06387.t1
chr3.1 exon 76849750 76850022 76849750 ID=MS.gene06387.t1.exon8;Parent=MS.gene06387.t1
chr3.1 CDS 76849750 76850022 76849750 ID=cds.MS.gene06387.t1;Parent=MS.gene06387.t1
chr3.1 exon 76850119 76850301 76850119 ID=MS.gene06387.t1.exon9;Parent=MS.gene06387.t1
chr3.1 CDS 76850119 76850301 76850119 ID=cds.MS.gene06387.t1;Parent=MS.gene06387.t1
chr3.1 exon 76850442 76850625 76850442 ID=MS.gene06387.t1.exon10;Parent=MS.gene06387.t1
chr3.1 CDS 76850442 76850625 76850442 ID=cds.MS.gene06387.t1;Parent=MS.gene06387.t1
Gene Sequence

>MS.gene06387

ATGGCTTTAGGGAAATATTCTAGAGTAGACGGTAGAAGATCGTCGAGTTACTGTTCAACAGTGACTATAGTTGTGTTTGTTGCTCTAGCCTTGATTGGGGTTTGGATGATGACATCATCTTCTGTAGTTCCCGTGCAAAAGGTCGTGCCTCGGGAGAGTAAAAATGAGGTGAAGGAACAGACTGAGGTGAGGGAACAGGTGAGTGAAACTGATAATAGCAATGCTCGGCAGTTTGAAGATAATCCTGGTGATTTGCCTGAGGATGCGACCAAGGGGGATAGCAATGTCAGCTCCGAAGAGAAGTCGGAGGAAAATTCCACGGAGAAGTCTTCTGAAGATACGAAGACAGAAGACGAGGGTAAGAAAACAGAAGATGAAGGCTCCAATACAGAAAATAACAAAGACAGCGAAGAGGCGTCTACTAAGGAATCTGAATCTGATGAGAGTGAAAAGAAAGATGAATCAGAGGAGAACAACAAGTCTGATTCAGATGAAAGTGAAAAGAAATCTAGTGACTCGAATGAAACAACAGATAGTAATGTAGAGGAGAAGGTGGAACAAAGCGAGAACAAAGAATCTGATGAAAACGCTGGTGAGAAGAATACAGATGATAATGCCAAAGACCAGAGTTCAAATGAGGTATTCCCTTCCGGGGCTCAGTCTGAGCTTCTAAATGAAACTACGACACAAACTGGATCGTTTTCTACACAGGCAGCAGAGTCAAAGAATGAAAAGGAGATTCAAGAGTCCTCCAAGACTGGGTACAATTGGAAAGTTTGTAATGTTACCGCTGGCCCCGACTTTATCCCATGCCTTGACAACTGGAAAGCGATTAGGAGTCTTCGGAGCACTAAACACTATGAACATCGAGAAAGACACTGTCCTGAAGAACCTCCCACCTGCCTTGTCTCTCTTCCTGAAGGATATAAGCGCTCTATTGAGTGGCCTAAAAGCAGAGAGAAGGTTAAAATCAAATCTTGTCAATTGTCATTTCATTCTCTGGTTGTTTTTCTTTTTCCTAAAATTATATGTTATTTCTCCTGCAGATATGGTATTACAATGTTCCACACACTAAGCTTGCTGAAGTTAAGGGGCATCAAAATTGGGTGAAAGTTACGGGTGAGTATCTTACTTTTCCTGGTGGTGGAACCCAATTCAAGCATGGGGCACTTCATTACATTGACTTTATACAAGAGGTATGCATTTTGTTTGGATTAAATTTGGCATTTATTTGCTGCTTTTGTATTTAATTTTTCCAAAAATTTCTGTTTAACTTGTATATTATCTGAACTTTCAAGATCAATATATAATCAATGTAATCCCTAACTTGTCAAGTTGTCACACCCTTTTAAGAAAAAGAAAAAATCACCGCACCAGTATAGCCTTTAAAAATCTGTTAATATTGGAATGAAAAAAAATATTATGGCAATTCAACTCTATAGAGCGTAAAAATCTTGTTGATCTAAGCTTGTGGGAAGCAGCTCATAGGTAGCTTCTCGTCCAAGTTTCTCTTTATTATGATACCTGGAGTGAAGAAATTGTTTGTTGCTATCTCAACACAATTATGATTATTTTCATGTTCTGCCACAGTTTAGACCGAACTGGTAGGAATGGCACATATGATCTGCATTGACTAATAAACAAATAGTAAATGAGATACAAAAATTGCAGTTCAACTATAGTATTGAATTTGAGTAGACCTGAAAGTTCTTCAATGACTTTCTGTACCAACTGCCAATAGAGGAAATTAAGATACGTTGGATGATAAAATCCCCCCTCCTCCCCGTTTACGCACAACAGGACAAATCCTAATACATATGAACTGCACATCTGTGAGGCACTGGATGACAACCAAAATTTACCATGATATTGATTTACCTTCATTAAATGATCTTCTACAAACCAGCTTCTTTATCAGAAGAAGTTATGTGAAATCTACATACTTTCATCTTAAACTTTTTTTAGATTCTAGAATTTACAATGTTTACTCGATGTGGACGAGCAGTCAAGCATTTTACCTAATAGAGCTTTGATGATGCAGACTCTGCCTGACATTGCTTGGGGCAAACGCACACGTGTTATACTAGATGTTGGATGTGGAGTTGCCAGCTTCGGAGGCTTTCTCTTTGATAGAGATGTACTTGCAATGTCACTTGCAACCAAAGGATGAACATGAAGCTCAGGTTCAATTTGCTCTTGAGAGGGGGATTCCTGCTATATCTGCTGTAATGGGCACAAAGAGGCTTCCCTTCCCTGGGAGAGTATTTGATGCAGTCCATTGTGCACGTTGTAGAGTTCCATGGCACATTGAAGGTATTCAGATTACACAGATTCTGTTTACATGATTAGATTAGTTTATTATATAGAATTTTGATCGTATTCATTTAGGCATTTATCAATCTTAACTTGGTATATAAATTGTAGGCGACAGACAACATATAATACATGTAAATGTCACTGGATTTTGTTTGTTATACAGCTATTTTGGTGGGGTGGGTATGTTGGATTATTTTACGTTATTCTTACTATCAAGATGAAGAGAAAAATGTGTGACGTTTGATGAAATCCATGTGTTTGAATTACACAGCAGAGACTCTACTATTTATATGCAATAATTATGAGAATCACCAATATCCTAGTTAACATGATTACTAGATTTGATTACCTTATTTACATGTAACAAAAACAATTTACAACTGCAGGTGGTAAACTTCTTTTGGAGCTGAACAGAGTATTGCGGCCTGGTGGTTTTTTTGTATGGTCTGCGACTCCTATTTATCAGAAGCTTCCTGAAGATGTTGAAATATGGAATGGTAAATAATAATAACTAGTCATGTGTTCCTTTTTTGTGCATTTTAATGTAGGTTTTCAATCTTGACATTTATGAATTTGTTAACAGCGATGAAAGCATTAACAAAATCAATATGCTGGGAACTTGTTTCAATCAGCAAGGATCAAGTTAATGGAGTGGTGTAGCCATATACAAGAAGCCACTATCCAATGATTGTTATGAGCAACGATCAAAGAATGAGCCTCCACTGTGTCAAAAATCTGATGATCCCAATGCAGCATGGTATTCCTTCCTTAACTGACATGGTGTTTTCTTAAGCAATAACAACAACCCAAGCCTTATCCTACTAAGTGGGTCGGCTATGTGGTTTTTTTAAAGCAAAAACCAAAATAGAAATTTATATTTTGCCGAGTTAATTGCTGAATTAGTCTTTGATTGCAGTCGCTTACACTGAGAAAACTTTAAAACAGAGCTGATAGTTGCTTCTTACCCCCTTCCTGTCTTGGAAAAGTGAGGAACATTTGTATAAAACAAGTATAAAAATAAAACAGGGCTTTTTATTTGGCTGGAGGACTTAGATGTTTCTGCTGCAAATGAACAATTATTGTACTTCGAGATTTATCTGCGAAATTTTCAATTACACTAGTATTATAATGTTCATGCAGTCTAATCTCTGATGTGACAGGTATATTAAATTGCAAGCATGCATACACAAAGTGCCAGTTAGTTCAAGTGAACGCGGGTCACAGTGGCCAGAAAAGTGGCCAGCCAGGCTGACCAATGTACCATATTGGTTGTCAAGTTCCCAAGTTGGAGTCTATGGTAAGCCGGCCCCTGAAGATTTTGCTGCTGATAATAAACACTGGAAACGTGTAGTGTCCAAGTCTTATCTAAACGGATTGGGAATTCAGTGGTCAAATGTACGGAATGTCATGGATATGAACTCAATCTATGGAGGGTGAGCAAAAATCATTGTTTCAAATATTATTGTGAACTATTATATACTTACTAATATGTCCTTCCGTGTTTGACATCTACCGATTGTGGCTTCCAGATTTGCTGCAGCTTTGAAAGATTTGAATATTTGGGTCATGAATGTAGTTTCAATAGACTCCGCAGATACCCTTCCCATTATTTATGAACGGGGTCTTTTTGGTATATATCATGATTGGTGTGAATCATTAGCACCTATCCCAGGACGTATGATCTCCTCCATGCAGATCATCTCTTTTCAAAGGTTCAGAAAAGGTGAAAATAATTATTTCATTCCCACATTAATAACCAGCAAACTTTTTATTATGGTTTTGCTAATGCTTATTTGGTGGTCACGCAGATGCAATCTAGCTTCTCTGGTAGCTGAGGTTGATCGGATCTCAGGCCTGAAGGAAAGCTTATTGTCCGGGACACTGTTGAGGTCATTAACGAGCTTGAGAGCATGGTAAAGTCCATGCAGTGGGAGGTTCGCATGACCTACTCCAAGGATAAGGAGGGTTTGTTATGTGTCCAGAAGTCCACCTGGCGGCCTAAGGAGACGGAGACACTCAAGTATGCTATTGTTTAA
Protein sequence

>MS.gene06387.t1

MALGKYSRVDGRRSSSYCSTVTIVVFVALALIGVWMMTSSSVVPVQKVVPRESKNEVKEQTEVREQVSETDNSNARQFEDNPGDLPEDATKGDSNVSSEEKSEENSTEKSSEDTKTEDEGKKTEDEGSNTENNKDSEEASTKESESDESEKKDESEENNKSDSDESEKKSSDSNETTDSNVEEKVEQSENKESDENAGEKNTDDNAKDQSSNEVFPSGAQSELLNETTTQTGSFSTQAAESKNEKEIQESSKTGYNWKVCNVTAGPDFIPCLDNWKAIRSLRSTKHYEHRERHCPEEPPTCLVSLPEGYKRSIEWPKSREKIWYYNVPHTKLAEVKGHQNWVKVTGEYLTFPGGGTQFKHGALHYIDFIQETLPDIAWGKRTRVILDVGCGVASFGGFLFDRDVQFALERGIPAISAVMGTKRLPFPGRVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFVWSATPIYQKLPEDVEIWNAMKALTKSICWELVSISKDQKPLSNDCYEQRSKNEPPLCQKSDDPNAAWYIKLQACIHKVPVSSSERGSQWPEKWPARLTNVPYWLSSSQVGVYGKPAPEDFAADNKHWKRVVSKSYLNGLGIQWSNVRNVMDMNSIYGGFAAALKDLNIWVMNVVSIDSADTLPIIYERGLFGIYHDWCESLAPIPGRMISSMQIISFQRPEGKLIVRDTVEVINELESMVKSMQWEVRMTYSKDKEGLLCVQKSTWRPKETETLKYAIV