AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054971

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054971.t1 MTR_3g096480 95.745 564 18 2 55 617 226 784 0.0 1139
MS.gene054971.t1 MTR_3g096480 78.571 84 17 1 1 83 1 84 4.65e-29 123
MS.gene054971.t1 MTR_8g093880 79.682 566 107 3 55 617 254 814 0.0 984
MS.gene054971.t1 MTR_8g093880 64.384 73 23 3 1 72 1 71 3.22e-17 86.3
MS.gene054971.t1 MTR_5g021100 67.826 575 168 4 46 612 271 836 0.0 858
MS.gene054971.t1 MTR_3g088790 68.280 558 165 4 66 617 199 750 0.0 840
MS.gene054971.t1 MTR_8g076650 65.474 559 170 5 66 611 344 892 0.0 796
MS.gene054971.t1 MTR_5g083150 51.805 554 250 5 59 611 63 600 0.0 615
MS.gene054971.t1 MTR_3g071530 53.788 528 224 6 85 612 142 649 0.0 587
MS.gene054971.t1 MTR_1g022255 48.582 564 261 8 52 611 163 701 0.0 570
MS.gene054971.t1 MTR_1g029730 47.451 510 245 10 86 588 141 634 1.30e-162 480
MS.gene054971.t1 MTR_3g068990 44.238 538 271 11 60 592 134 647 1.17e-160 476
MS.gene054971.t1 MTR_5g080720 46.813 502 246 9 96 592 134 619 1.29e-160 474
MS.gene054971.t1 MTR_5g080720 47.609 460 220 9 96 550 134 577 4.46e-145 432
MS.gene054971.t1 MTR_1g442840 44.362 541 258 16 96 614 101 620 3.25e-143 429
MS.gene054971.t1 MTR_1g442840 45.349 516 245 13 117 614 11 507 6.47e-143 425
MS.gene054971.t1 MTR_1g069785 44.238 538 263 14 96 614 71 590 8.80e-142 425
MS.gene054971.t1 MTR_8g432620 41.667 528 270 13 96 609 97 600 1.49e-137 414
MS.gene054971.t1 MTR_7g076150 39.818 550 290 13 76 610 65 588 1.71e-135 408
MS.gene054971.t1 MTR_1g075900 42.589 533 269 12 96 609 100 614 3.56e-135 409
MS.gene054971.t1 MTR_8g100075 40.926 540 280 15 89 609 101 620 1.28e-132 402
MS.gene054971.t1 MTR_0019s0120 41.682 535 269 17 96 609 114 626 2.49e-132 402
MS.gene054971.t1 MTR_1g101370 39.512 615 321 23 23 609 26 617 4.99e-132 401
MS.gene054971.t1 MTR_7g006060 42.829 509 260 10 96 589 52 544 2.76e-130 394
MS.gene054971.t1 MTR_5g026930 41.187 539 273 15 96 614 81 595 8.24e-130 394
MS.gene054971.t1 MTR_8g071280 40.525 533 275 13 96 609 79 588 1.14e-129 394
MS.gene054971.t1 MTR_4g098890 41.809 586 283 17 27 597 45 587 7.96e-129 414
MS.gene054971.t1 MTR_8g055840 38.217 628 339 21 3 609 1 600 1.83e-128 391
MS.gene054971.t1 MTR_8g432680 39.522 544 284 17 96 615 114 636 2.17e-126 387
MS.gene054971.t1 MTR_1g022255 43.779 434 216 7 52 482 163 571 4.04e-125 381
MS.gene054971.t1 MTR_7g076150 41.685 463 239 9 161 610 1 445 4.08e-125 377
MS.gene054971.t1 MTR_7g076170 39.399 566 300 18 72 615 87 631 7.08e-125 382
MS.gene054971.t1 MTR_5g040360 40.866 531 273 14 96 609 93 599 1.23e-123 379
MS.gene054971.t1 MTR_3g040370 40.335 538 277 16 96 616 94 604 2.51e-121 372
MS.gene054971.t1 MTR_1g051055 38.590 539 276 15 96 609 95 603 4.35e-112 348
MS.gene054971.t1 MTR_0019s0120 40.406 443 225 15 96 521 114 534 8.24e-100 314
MS.gene054971.t1 MTR_5g026930 41.084 443 220 14 96 521 81 499 2.96e-98 309
MS.gene054971.t1 MTR_5g064080 31.447 636 347 19 17 610 83 671 1.40e-89 291
MS.gene054971.t1 MTR_3g074780 30.866 635 352 22 22 610 96 689 8.51e-82 271
MS.gene054971.t1 MTR_4g083030 31.006 616 353 22 19 603 25 599 2.57e-76 254
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054971.t1 AT5G64030 77.076 554 120 2 66 617 276 824 0.0 934
MS.gene054971.t1 AT5G64030 60.317 63 22 2 1 60 1 63 1.48e-13 74.7
MS.gene054971.t1 AT1G29470 72.137 585 149 4 38 617 190 765 0.0 903
MS.gene054971.t1 AT1G29470 72.137 585 149 4 38 617 190 765 0.0 903
MS.gene054971.t1 AT3G51070 69.686 574 159 3 49 615 330 895 0.0 884
MS.gene054971.t1 AT2G34300 68.847 581 166 4 46 617 191 765 0.0 877
MS.gene054971.t1 AT2G34300 68.847 581 166 4 46 617 191 765 0.0 877
MS.gene054971.t1 AT2G34300 68.847 581 166 4 46 617 191 765 0.0 877
MS.gene054971.t1 AT3G51070 71.542 506 129 3 49 547 330 827 0.0 802
MS.gene054971.t1 AT2G40280 52.830 530 228 7 86 615 80 587 0.0 594
MS.gene054971.t1 AT3G56080 49.669 604 264 12 22 611 33 610 0.0 587
MS.gene054971.t1 AT1G19430 49.719 533 242 7 81 611 216 724 0.0 565
MS.gene054971.t1 AT1G19430 49.719 533 242 7 81 611 216 724 0.0 565
MS.gene054971.t1 AT3G56080 50.370 540 232 11 22 547 33 550 0.0 535
MS.gene054971.t1 AT5G06050 44.727 550 271 13 52 592 118 643 8.89e-164 484
MS.gene054971.t1 AT1G77260 44.991 529 268 10 66 588 120 631 1.20e-162 480
MS.gene054971.t1 AT2G39750 46.614 502 247 10 96 592 186 671 1.27e-161 479
MS.gene054971.t1 AT3G23300 43.043 539 267 14 96 614 88 606 9.38e-140 420
MS.gene054971.t1 AT3G23300 43.043 539 267 14 96 614 88 606 9.38e-140 420
MS.gene054971.t1 AT4G14360 44.204 509 248 14 96 589 85 572 5.35e-139 418
MS.gene054971.t1 AT4G14360 44.204 509 248 14 96 589 85 572 5.35e-139 418
MS.gene054971.t1 AT4G00740 40.797 527 274 11 98 610 92 594 1.57e-137 414
MS.gene054971.t1 AT4G00740 40.797 527 274 11 98 610 92 594 1.57e-137 414
MS.gene054971.t1 AT4G10440 40.107 561 296 15 69 609 76 616 6.11e-136 411
MS.gene054971.t1 AT1G04430 44.055 513 245 15 96 590 93 581 1.29e-135 410
MS.gene054971.t1 AT1G04430 44.055 513 245 15 96 590 93 581 1.29e-135 410
MS.gene054971.t1 AT1G04430 44.055 513 245 15 96 590 93 581 1.29e-135 410
MS.gene054971.t1 AT1G33170 40.463 561 295 14 69 609 93 634 6.77e-135 409
MS.gene054971.t1 AT1G31850 40.631 539 268 14 96 609 85 596 1.35e-133 404
MS.gene054971.t1 AT1G31850 40.631 539 268 14 96 609 85 596 1.35e-133 404
MS.gene054971.t1 AT1G31850 40.631 539 268 14 96 609 85 596 1.35e-133 404
MS.gene054971.t1 AT1G31850 40.631 539 268 14 96 609 85 596 1.35e-133 404
MS.gene054971.t1 AT5G14430 40.962 603 310 18 5 589 2 576 1.02e-132 402
MS.gene054971.t1 AT4G19120 41.220 541 262 16 96 609 79 590 2.58e-132 400
MS.gene054971.t1 AT4G19120 41.220 541 262 16 96 609 79 590 2.58e-132 400
MS.gene054971.t1 AT1G26850 41.774 541 275 16 96 616 95 615 5.37e-131 398
MS.gene054971.t1 AT1G26850 41.774 541 275 16 96 616 95 615 5.37e-131 398
MS.gene054971.t1 AT5G14430 40.464 603 313 18 5 589 2 576 1.43e-130 397
MS.gene054971.t1 AT2G45750 38.288 619 328 23 3 592 1 594 1.21e-129 395
MS.gene054971.t1 AT1G19430 45.545 404 195 6 81 483 216 595 2.57e-126 385
MS.gene054971.t1 AT4G00750 40.310 516 266 17 118 609 125 622 1.34e-122 377
MS.gene054971.t1 AT4G18030 41.209 546 274 17 85 609 84 603 1.83e-121 373
MS.gene054971.t1 AT5G04060 40.602 532 272 13 96 609 92 597 5.74e-121 371
MS.gene054971.t1 AT2G43200 41.006 517 268 15 96 597 100 594 1.21e-120 371
MS.gene054971.t1 AT2G43200 41.006 517 268 15 96 597 100 594 1.21e-120 371
MS.gene054971.t1 AT3G10200 39.850 532 278 15 96 609 81 588 2.00e-118 364
MS.gene054971.t1 AT3G10200 39.841 502 263 14 96 582 81 558 7.18e-112 348
MS.gene054971.t1 AT4G19120 40.889 450 213 15 96 521 79 499 9.34e-102 318
MS.gene054971.t1 AT1G26850 40.046 437 219 15 96 517 95 503 2.40e-88 283
MS.gene054971.t1 AT1G78240 30.048 629 358 22 21 606 87 676 1.88e-81 270
MS.gene054971.t1 AT1G78240 30.048 629 358 22 21 606 87 676 1.88e-81 270
MS.gene054971.t1 AT1G13860 33.090 547 292 20 96 606 90 598 1.51e-75 253
MS.gene054971.t1 AT1G13860 33.090 547 292 20 96 606 90 598 1.51e-75 253
MS.gene054971.t1 AT1G13860 33.090 547 292 20 96 606 90 598 1.51e-75 253
MS.gene054971.t1 AT1G13860 33.090 547 292 20 96 606 90 598 1.51e-75 253
MS.gene054971.t1 AT1G13860 36.298 416 220 13 217 606 46 442 4.66e-75 247
MS.gene054971.t1 AT2G03480 33.333 531 297 17 97 606 96 590 2.99e-71 241
MS.gene054971.t1 AT2G03480 32.775 537 303 17 97 606 96 601 2.36e-70 239
MS.gene054971.t1 AT2G03480 30.380 316 192 10 97 399 96 396 7.77e-30 122

Find 182 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGAAAGATTTGAATATT+TGG 0.164392 3.1:+76822201 MS.gene054971:CDS
TGCAGGTGGTAAACTTCTTT+TGG 0.230174 3.1:+76821041 MS.gene054971:intron
CAATCCGAAGACATGGCTTT+AGG 0.255854 3.1:+76818332 None:intergenic
GGATAGTGGCTTCTTGTATA+TGG 0.279107 3.1:-76821321 None:intergenic
AAGACCCCGTTCATAAATAA+TGG 0.282831 3.1:-76822264 None:intergenic
CTCTAGCCTTGATTGGGGTT+TGG 0.283882 3.1:+76818426 MS.gene054971:CDS
TCAGGAAGCTTCTGATAAAT+AGG 0.293202 3.1:-76821114 None:intergenic
TAGGCCGCCAGGTGGACTTC+TGG 0.299464 3.1:-76822641 None:intergenic
TTCCATATTTCAACATCTTC+AGG 0.299746 3.1:-76821132 None:intergenic
TTATCAGCAGCAAAATCTTC+AGG 0.304087 3.1:-76821969 None:intergenic
ATCAGCAAGGATCAAGTTAA+TGG 0.304469 3.1:+76821287 MS.gene054971:CDS
TTTGTTGCTCTAGCCTTGAT+TGG 0.306385 3.1:+76818419 MS.gene054971:CDS
AAGTTAAGGGGCATCAAAAT+TGG 0.309838 3.1:+76819425 MS.gene054971:CDS
GACTCTGCCTGACATTGCTT+GGG 0.309960 3.1:+76820384 MS.gene054971:intron
AGGCAGGTGGGAGGTTCTTC+AGG 0.312570 3.1:-76819226 None:intergenic
TGAGCTTCATGTTCATCCTT+TGG 0.318842 3.1:-76820502 None:intergenic
TTATCCCATGCCTTGACAAC+TGG 0.320818 3.1:+76819146 MS.gene054971:CDS
TTTGAAAGATTTGAATATTT+GGG 0.321547 3.1:+76822202 MS.gene054971:CDS
CACTAAGCTTGCTGAAGTTA+AGG 0.329223 3.1:+76819411 MS.gene054971:CDS
AATCCGAAGACATGGCTTTA+GGG 0.343883 3.1:+76818333 None:intergenic
TTCCTGAAGATGTTGAAATA+TGG 0.348064 3.1:+76821130 MS.gene054971:CDS
CCTTCCCATTATTTATGAAC+GGG 0.357509 3.1:+76822259 MS.gene054971:CDS
TGGGAACTTGACAACCAATA+TGG 0.368562 3.1:-76821921 None:intergenic
ATGGATATGAACTCAATCTA+TGG 0.377899 3.1:+76822068 MS.gene054971:CDS
AGTTCCCAAGTTGGAGTCTA+TGG 0.386840 3.1:+76821936 MS.gene054971:CDS
TTGTTGCTCTAGCCTTGATT+GGG 0.386986 3.1:+76818420 MS.gene054971:CDS
AGACTCTGCCTGACATTGCT+TGG 0.390574 3.1:+76820383 MS.gene054971:intron
CCGCGTTCACTTGAACTAAC+TGG 0.395097 3.1:-76821855 None:intergenic
TCAAAATTGGGTGAAAGTTA+CGG 0.401724 3.1:+76819438 MS.gene054971:CDS
CCTCCAAGACTGGGTACAAT+TGG 0.405008 3.1:+76819092 MS.gene054971:CDS
ACAAAGAGGCTTCCCTTCCC+TGG 0.407202 3.1:+76820577 MS.gene054971:CDS
CAAAATTGGGTGAAAGTTAC+GGG 0.407429 3.1:+76819439 MS.gene054971:CDS
GAAGTGCCCCATGCTTGAAT+TGG 0.410323 3.1:-76819492 None:intergenic
CTCCGTCTCCTTAGGCCGCC+AGG 0.412774 3.1:-76822652 None:intergenic
ATTCAAGAGTCCTCCAAGAC+TGG 0.418254 3.1:+76819082 MS.gene054971:CDS
CAAGTCTTATCTAAACGGAT+TGG 0.419452 3.1:+76822016 MS.gene054971:CDS
CCTGCTATATCTGCTGTAAT+GGG 0.421591 3.1:+76820553 MS.gene054971:CDS
TCCTGCTATATCTGCTGTAA+TGG 0.421692 3.1:+76820552 MS.gene054971:CDS
CATTAACAAAATCAATATGC+TGG 0.424608 3.1:+76821252 MS.gene054971:CDS
GGTACATTGGTCAGCCTGGC+TGG 0.424736 3.1:-76821900 None:intergenic
GGCTGACCAATGTACCATAT+TGG 0.427892 3.1:+76821907 MS.gene054971:CDS
AGACCCCGTTCATAAATAAT+GGG 0.428891 3.1:-76822263 None:intergenic
CAGATGCAATCTAGCTTCTC+TGG 0.430244 3.1:+76822467 MS.gene054971:intron
ACTAAGCTTGCTGAAGTTAA+GGG 0.433369 3.1:+76819412 MS.gene054971:CDS
TTGACAACTGGAAAGCGATT+AGG 0.436526 3.1:+76819158 MS.gene054971:CDS
TTTCCAATTGTACCCAGTCT+TGG 0.437033 3.1:-76819095 None:intergenic
TCATAACAATCATTGGATAG+TGG 0.441820 3.1:-76821335 None:intergenic
TCGTTGCTCATAACAATCAT+TGG 0.446283 3.1:-76821342 None:intergenic
CTGAGGTTGATCGGATTCTC+AGG 0.448079 3.1:+76822493 MS.gene054971:CDS
GGCCAGAAAAGTGGCCAGCC+AGG 0.448570 3.1:+76821886 MS.gene054971:CDS
GTGTCCAAGTCTTATCTAAA+CGG 0.458820 3.1:+76822011 MS.gene054971:CDS
TCAAGGCATGGGATAAAGTC+GGG 0.458938 3.1:-76819139 None:intergenic
CAATCCGTTTAGATAAGACT+TGG 0.459235 3.1:-76822015 None:intergenic
GAAGGAATACCATGCTGCAT+TGG 0.460905 3.1:-76821405 None:intergenic
CTCTGGTAGCTGAGGTTGAT+CGG 0.463097 3.1:+76822484 MS.gene054971:CDS
TTCTGTAGTTCCCGTGCAAA+AGG 0.463204 3.1:+76818463 MS.gene054971:CDS
ATAGAGCGCTTATATCCTTC+AGG 0.463357 3.1:-76819259 None:intergenic
TTGAGTGTCTCCGTCTCCTT+AGG 0.465804 3.1:-76822660 None:intergenic
AAGGAATACCATGCTGCATT+GGG 0.465896 3.1:-76821404 None:intergenic
AGGTTCAATTTGCTCTTGAG+AGG 0.466968 3.1:+76820524 MS.gene054971:CDS
AAGTCTTATCTAAACGGATT+GGG 0.468240 3.1:+76822017 MS.gene054971:CDS
CGTTTGCCCCAAGCAATGTC+AGG 0.469178 3.1:-76820391 None:intergenic
CCAATTGTACCCAGTCTTGG+AGG 0.469573 3.1:-76819092 None:intergenic
AAAGAGAAAGCCTCCGAAGC+TGG 0.471336 3.1:-76820449 None:intergenic
CGTGCAAAAGGTCGTGCCTC+GGG 0.471678 3.1:+76818475 MS.gene054971:CDS
ACAGACTGAGGTGAGGGAAC+AGG 0.474299 3.1:+76818520 MS.gene054971:CDS
CGGACAATAAGCTTTCCTTC+AGG 0.478801 3.1:-76822516 None:intergenic
GGATGTGGAGTTGCCAGCTT+CGG 0.480928 3.1:+76820436 MS.gene054971:CDS
AGTTAAGGGGCATCAAAATT+GGG 0.484810 3.1:+76819426 MS.gene054971:CDS
GGAAAGCGATTAGGAGTCTT+CGG 0.484828 3.1:+76819167 MS.gene054971:CDS
CCGTGCAAAAGGTCGTGCCT+CGG 0.487700 3.1:+76818474 MS.gene054971:CDS
CCCTTCCCATTATTTATGAA+CGG 0.488962 3.1:+76822258 MS.gene054971:CDS
CTGAAGGAAAGCTTATTGTC+CGG 0.497261 3.1:+76822517 MS.gene054971:CDS
TAACAAACCCTCCTTATCCT+TGG 0.499118 3.1:-76822613 None:intergenic
AGAGTTCCATGGCACATTGA+AGG 0.500328 3.1:+76820634 MS.gene054971:CDS
ATCAAATACTCTCCCAGGGA+AGG 0.510333 3.1:-76820590 None:intergenic
CATGACCTACTCCAAGGATA+AGG 0.511195 3.1:+76822602 MS.gene054971:CDS
GAAGTCCACCTGGCGGCCTA+AGG 0.514851 3.1:+76822644 MS.gene054971:CDS
AAGTGCCCCATGCTTGAATT+GGG 0.517462 3.1:-76819491 None:intergenic
TTGAATTGGGTTCCACCACC+AGG 0.519299 3.1:-76819478 None:intergenic
AGCAGAGTCAAAGAATGAAA+AGG 0.519819 3.1:+76819057 MS.gene054971:CDS
GCTTTCCAGTTGTCAAGGCA+TGG 0.520419 3.1:-76819151 None:intergenic
AAAGGATGAACATGAAGCTC+AGG 0.523572 3.1:+76820504 MS.gene054971:CDS
TGCAATGTCACTTGCACCAA+AGG 0.524307 3.1:+76820486 MS.gene054971:CDS
TATCAGCAGCAAAATCTTCA+GGG 0.525199 3.1:-76821968 None:intergenic
ATGGAGGAGATCATACGTCC+TGG 0.525368 3.1:-76822330 None:intergenic
TTCAATTTGCTCTTGAGAGG+GGG 0.525841 3.1:+76820527 MS.gene054971:CDS
CACCTGGCGGCCTAAGGAGA+CGG 0.529728 3.1:+76822650 MS.gene054971:CDS
GTGGAACCCAATTCAAGCAT+GGG 0.531941 3.1:+76819485 MS.gene054971:CDS
GGTTCAATTTGCTCTTGAGA+GGG 0.532634 3.1:+76820525 MS.gene054971:CDS
TGCCTTGTCTCTCTTCCTGA+AGG 0.535020 3.1:+76819244 MS.gene054971:CDS
AAGGATCAAGTTAATGGAGT+TGG 0.537672 3.1:+76821293 MS.gene054971:CDS
GCAGCAAAATCTTCAGGGGC+CGG 0.538266 3.1:-76821963 None:intergenic
CAAAGAGGCTTCCCTTCCCT+GGG 0.538740 3.1:+76820578 MS.gene054971:CDS
CATCATCCAAACCCCAATCA+AGG 0.540492 3.1:-76818432 None:intergenic
ACTGCATCAAATACTCTCCC+AGG 0.541601 3.1:-76820595 None:intergenic
CATTAACGAGCTTGAGAGCA+TGG 0.545161 3.1:+76822554 MS.gene054971:CDS
ATATGGTACATTGGTCAGCC+TGG 0.547368 3.1:-76821904 None:intergenic
TGAAGGAAAGCTTATTGTCC+GGG 0.549044 3.1:+76822518 MS.gene054971:CDS
TGGGATAAAGTCGGGGCCAG+CGG 0.549843 3.1:-76819131 None:intergenic
TTACATTGACTTTATACAAG+AGG 0.550306 3.1:+76819516 MS.gene054971:CDS
GGGAAATATTCTAGAGTAGA+CGG 0.551732 3.1:+76818353 MS.gene054971:CDS
ATTAACAAAATCAATATGCT+GGG 0.551786 3.1:+76821253 MS.gene054971:CDS
GAGATCATACGTCCTGGGAT+AGG 0.553125 3.1:-76822324 None:intergenic
TGGTTGTCAAGTTCCCAAGT+TGG 0.553335 3.1:+76821927 MS.gene054971:CDS
CTTTCCAGTTGTCAAGGCAT+GGG 0.554013 3.1:-76819150 None:intergenic
GGTCACAGTGGCCAGAAAAG+TGG 0.554071 3.1:+76821877 MS.gene054971:CDS
AAAGTTTGTAATGTTACCGC+TGG 0.554252 3.1:+76819115 MS.gene054971:CDS
TGTGGAGTTGCCAGCTTCGG+AGG 0.557116 3.1:+76820439 MS.gene054971:CDS
CCCATTACAGCAGATATAGC+AGG 0.558260 3.1:-76820553 None:intergenic
GAATTCAGTGGTCAAATGTA+CGG 0.565252 3.1:+76822039 MS.gene054971:CDS
CCCGTTCATAAATAATGGGA+AGG 0.566248 3.1:-76822259 None:intergenic
GTCAAGGCATGGGATAAAGT+CGG 0.567476 3.1:-76819140 None:intergenic
GATCGGATTCTCAGGCCTGA+AGG 0.569364 3.1:+76822501 MS.gene054971:CDS
CTGAACAGAGTATTGCGGCC+TGG 0.570629 3.1:+76821066 MS.gene054971:CDS
AGTTGGAGTCTATGGTAAGC+CGG 0.573432 3.1:+76821944 MS.gene054971:CDS
GGTGGAACCCAATTCAAGCA+TGG 0.579009 3.1:+76819484 MS.gene054971:CDS
TCTAGCTTCTCTGGTAGCTG+AGG 0.579746 3.1:+76822476 MS.gene054971:CDS
TAATCGCTTTCCAGTTGTCA+AGG 0.579902 3.1:-76819156 None:intergenic
CATGCGAACCTCCCACTGCA+TGG 0.581028 3.1:-76822583 None:intergenic
TCAAATACTCTCCCAGGGAA+GGG 0.581519 3.1:-76820589 None:intergenic
AGGAAGAGAGACAAGGCAGG+TGG 0.585497 3.1:-76819239 None:intergenic
TGAATACCTTCAATGTGCCA+TGG 0.585774 3.1:-76820640 None:intergenic
TATTGTCCGGGACACTGTTG+AGG 0.586039 3.1:+76822530 MS.gene054971:CDS
CTTCCCATTATTTATGAACG+GGG 0.587916 3.1:+76822260 MS.gene054971:CDS
CTTACCATAGACTCCAACTT+GGG 0.588345 3.1:-76821940 None:intergenic
TGACAACCAATATGGTACAT+TGG 0.589602 3.1:-76821913 None:intergenic
GTTATACTAGATGTTGGATG+TGG 0.591044 3.1:+76820421 MS.gene054971:CDS
GACCTACTCCAAGGATAAGG+AGG 0.591238 3.1:+76822605 MS.gene054971:CDS
TTCAAGAGTCCTCCAAGACT+GGG 0.592523 3.1:+76819083 MS.gene054971:CDS
GATATGAACTCAATCTATGG+AGG 0.592603 3.1:+76822071 MS.gene054971:CDS
TGGAGGAGATCATACGTCCT+GGG 0.597705 3.1:-76822329 None:intergenic
TTGCTGCTGATAATAAACAC+TGG 0.598168 3.1:+76821979 MS.gene054971:CDS
GGATATAAGCGCTCTATGAG+TGG 0.598990 3.1:+76819265 MS.gene054971:CDS
GTCAAATGTACGGAATGTCA+TGG 0.602207 3.1:+76822049 MS.gene054971:CDS
GTGCACGTTGTAGAGTTCCA+TGG 0.602530 3.1:+76820623 MS.gene054971:CDS
CTAAGCTTGCTGAAGTTAAG+GGG 0.603146 3.1:+76819413 MS.gene054971:CDS
GGAAGAGAGACAAGGCAGGT+GGG 0.603261 3.1:-76819238 None:intergenic
TAATGACCTCAACAGTGTCC+CGG 0.603316 3.1:-76822536 None:intergenic
GCTTACCATAGACTCCAACT+TGG 0.604957 3.1:-76821941 None:intergenic
GAAGGAACAGACTGAGGTGA+GGG 0.605363 3.1:+76818514 MS.gene054971:CDS
GTTCAATTTGCTCTTGAGAG+GGG 0.608000 3.1:+76820526 MS.gene054971:CDS
TTCAGGAAGAGAGACAAGGC+AGG 0.609303 3.1:-76819242 None:intergenic
GGAACTTGTTTCAATCAGCA+AGG 0.612001 3.1:+76821274 MS.gene054971:CDS
TGGAGCTGAACAGAGTATTG+CGG 0.613676 3.1:+76821061 MS.gene054971:CDS
AATCATTTAGCACCTATCCC+AGG 0.615139 3.1:+76822312 MS.gene054971:CDS
CCAGTTAGTTCAAGTGAACG+CGG 0.619426 3.1:+76821855 MS.gene054971:CDS
TGAAGGAACAGACTGAGGTG+AGG 0.620122 3.1:+76818513 MS.gene054971:CDS
TGTTGCTCTAGCCTTGATTG+GGG 0.623280 3.1:+76818421 MS.gene054971:CDS
GTGGCCTAAAAGCAGAGAGA+AGG 0.623669 3.1:+76819284 MS.gene054971:CDS
ACACGTGTTATACTAGATGT+TGG 0.623731 3.1:+76820415 MS.gene054971:CDS
CATGGTAAAGTCCATGCAGT+GGG 0.624917 3.1:+76822572 MS.gene054971:CDS
GAACTCTACAACGTGCACAA+TGG 0.628195 3.1:-76820618 None:intergenic
TTGAAAAGAGATGATCTGCA+TGG 0.628694 3.1:-76822349 None:intergenic
ACTTCAGCAAGCTTAGTGTG+TGG 0.630986 3.1:-76819406 None:intergenic
CTGCTGTAATGGGCACAAAG+AGG 0.637182 3.1:+76820563 MS.gene054971:CDS
CTGCATCAAATACTCTCCCA+GGG 0.637623 3.1:-76820594 None:intergenic
ACTCTGCCTGACATTGCTTG+GGG 0.639154 3.1:+76820385 MS.gene054971:CDS
GAAGATGTTGAAATATGGAA+TGG 0.639298 3.1:+76821135 MS.gene054971:CDS
CCGTTCATAAATAATGGGAA+GGG 0.642519 3.1:-76822258 None:intergenic
CTGATGATCCCAATGCAGCA+TGG 0.648087 3.1:+76821396 MS.gene054971:CDS
ATATGAACTCAATCTATGGA+GGG 0.649955 3.1:+76822072 MS.gene054971:CDS
GGTTCGCATGACCTACTCCA+AGG 0.652153 3.1:+76822596 MS.gene054971:CDS
CAAGTGAACGCGGGTCACAG+TGG 0.652261 3.1:+76821865 MS.gene054971:CDS
ACCTACTCCAAGGATAAGGA+GGG 0.652538 3.1:+76822606 MS.gene054971:CDS
AGAGAGACAAGGCAGGTGGG+AGG 0.652823 3.1:-76819235 None:intergenic
TATGTGTCCAGAAGTCCACC+TGG 0.655480 3.1:+76822634 MS.gene054971:CDS
AACAGAGTATTGCGGCCTGG+TGG 0.656543 3.1:+76821069 MS.gene054971:CDS
GGTAAAGTCCATGCAGTGGG+AGG 0.657793 3.1:+76822575 MS.gene054971:CDS
GCATGGTAAAGTCCATGCAG+TGG 0.661920 3.1:+76822571 MS.gene054971:CDS
TAAACGGATTGGGAATTCAG+TGG 0.664896 3.1:+76822027 MS.gene054971:CDS
ACCCTCCTTATCCTTGGAGT+AGG 0.669418 3.1:-76822607 None:intergenic
CGTCTCCTTAGGCCGCCAGG+TGG 0.669645 3.1:-76822649 None:intergenic
CAAGGCATGGGATAAAGTCG+GGG 0.669765 3.1:-76819138 None:intergenic
CAGTTAGTTCAAGTGAACGC+GGG 0.672917 3.1:+76821856 MS.gene054971:CDS
ATCAGCAGCAAAATCTTCAG+GGG 0.674815 3.1:-76821967 None:intergenic
ATCCTTCAGGAAGAGAGACA+AGG 0.675474 3.1:-76819246 None:intergenic
AATAATGGGAAGGGTATCTG+CGG 0.678257 3.1:-76822249 None:intergenic
TGGAACCCAATTCAAGCATG+GGG 0.686380 3.1:+76819486 MS.gene054971:CDS
TGAGGTGAAGGAACAGACTG+AGG 0.690937 3.1:+76818508 MS.gene054971:CDS
AAAAGAGATGATCTGCATGG+AGG 0.700577 3.1:-76822346 None:intergenic
GTGTCCAGAAGTCCACCTGG+CGG 0.714703 3.1:+76822637 MS.gene054971:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTCTTTTTCTTAAAA+GGG - chr3.1:76819688-76819707 None:intergenic 10.0%
!!! CAAAATATAAATTTCTATTT+TGG - chr3.1:76821523-76821542 None:intergenic 10.0%
!! AACAAGTATAAAAATAAAAC+AGG + chr3.1:76821666-76821685 MS.gene054971:intron 15.0%
!! ACAAGTATAAAAATAAAACA+GGG + chr3.1:76821667-76821686 MS.gene054971:intron 15.0%
!! TGGAATGAAAAAAAATATTA+TGG + chr3.1:76819745-76819764 MS.gene054971:intron 15.0%
!! TTTGAAAGATTTGAATATTT+GGG + chr3.1:76822202-76822221 MS.gene054971:CDS 15.0%
!!! CAATATTAACAGATTTTTAA+AGG - chr3.1:76819727-76819746 None:intergenic 15.0%
!!! CTTTAAAAATCTGTTAATAT+TGG + chr3.1:76819725-76819744 MS.gene054971:intron 15.0%
!!! GAGAAATAACATATAATTTT+AGG - chr3.1:76819362-76819381 None:intergenic 15.0%
!!! GATTTTTTCTTTTTCTTAAA+AGG - chr3.1:76819689-76819708 None:intergenic 15.0%
!!! TTTTTGTTTACATGTAAATA+AGG - chr3.1:76821010-76821029 None:intergenic 15.0%
!! ATTAACAAAATCAATATGCT+GGG + chr3.1:76821253-76821272 MS.gene054971:CDS 20.0%
!! TACATTAAAATGCACAAAAA+AGG - chr3.1:76821187-76821206 None:intergenic 20.0%
!! TATCATAATAAAGAGAAACT+TGG - chr3.1:76819845-76819864 None:intergenic 20.0%
!!! ACAAGTTAAACAGAAATTTT+TGG - chr3.1:76819600-76819619 None:intergenic 20.0%
!!! ATCAATATCATGGTAAATTT+TGG - chr3.1:76820197-76820216 None:intergenic 20.0%
!!! ATTTTGAATCGTATTCATTT+AGG + chr3.1:76820710-76820729 MS.gene054971:intron 20.0%
!!! CATTTTGTTTGGATTAAATT+TGG + chr3.1:76819543-76819562 MS.gene054971:intron 20.0%
!!! CTTTGAAAGATTTGAATATT+TGG + chr3.1:76822201-76822220 MS.gene054971:CDS 20.0%
!!! TTTTTGGTATATATCATGAT+TGG + chr3.1:76822285-76822304 MS.gene054971:CDS 20.0%
!!! TTTTTTGTGCATTTTAATGT+AGG + chr3.1:76821186-76821205 MS.gene054971:intron 20.0%
! AACCATAATAAAAAGTTTGC+TGG - chr3.1:76822421-76822440 None:intergenic 25.0%
! AATCATGTTAACTAGGATAT+TGG - chr3.1:76820973-76820992 None:intergenic 25.0%
! ATAATACATGTAAATGTCAC+TGG + chr3.1:76820781-76820800 MS.gene054971:intron 25.0%
! ATCTAGTAATCATGTTAACT+AGG - chr3.1:76820980-76820999 None:intergenic 25.0%
! ATGAAGGTAAATCAATATCA+TGG - chr3.1:76820207-76820226 None:intergenic 25.0%
! CATTAACAAAATCAATATGC+TGG + chr3.1:76821252-76821271 MS.gene054971:CDS 25.0%
! TGTAGAAGATCATTTAATGA+AGG - chr3.1:76820223-76820242 None:intergenic 25.0%
! TTTCTCTTTATTATGATACC+TGG + chr3.1:76819847-76819866 MS.gene054971:intron 25.0%
!! AACCAGCAAACTTTTTATTA+TGG + chr3.1:76822416-76822435 MS.gene054971:intron 25.0%
!! ATAAAACAGGGCTTTTTATT+TGG + chr3.1:76821679-76821698 MS.gene054971:intron 25.0%
!!! GTCTTTGTTATTTTCTGTAT+TGG - chr3.1:76818729-76818748 None:intergenic 25.0%
!!! TGTTTGTTATACAGCTATTT+TGG + chr3.1:76820808-76820827 MS.gene054971:intron 25.0%
!!! TTACATTGACTTTATACAAG+AGG + chr3.1:76819516-76819535 MS.gene054971:CDS 25.0%
AAACTGATAATAGCAATGCT+CGG + chr3.1:76818549-76818568 MS.gene054971:intron 30.0%
AAAGTCATTGAAGAACTTTC+AGG - chr3.1:76820045-76820064 None:intergenic 30.0%
AACAACAGATAGTAATGTAG+AGG + chr3.1:76818868-76818887 MS.gene054971:intron 30.0%
ATATGAACTCAATCTATGGA+GGG + chr3.1:76822072-76822091 MS.gene054971:CDS 30.0%
ATGGATATGAACTCAATCTA+TGG + chr3.1:76822068-76822087 MS.gene054971:CDS 30.0%
ATGTGCAGTTCATATGTATT+AGG - chr3.1:76820153-76820172 None:intergenic 30.0%
CAAAAACAATTTACAACTGC+AGG + chr3.1:76821024-76821043 MS.gene054971:intron 30.0%
CGTATCTTAATTTCCTCTAT+TGG - chr3.1:76820080-76820099 None:intergenic 30.0%
GAAGATGTTGAAATATGGAA+TGG + chr3.1:76821135-76821154 MS.gene054971:CDS 30.0%
GACTAATTCAGCAATTAACT+CGG - chr3.1:76821546-76821565 None:intergenic 30.0%
GGCATTTATCAATCTTAACT+TGG + chr3.1:76820731-76820750 MS.gene054971:intron 30.0%
TAGAGGAAATTAAGATACGT+TGG + chr3.1:76820081-76820100 MS.gene054971:intron 30.0%
TCAAAATTGGGTGAAAGTTA+CGG + chr3.1:76819438-76819457 MS.gene054971:CDS 30.0%
TCATAACAATCATTGGATAG+TGG - chr3.1:76821338-76821357 None:intergenic 30.0%
TGAAAAGAAAGATGAATCAG+AGG + chr3.1:76818790-76818809 MS.gene054971:intron 30.0%
TTCCATATTTCAACATCTTC+AGG - chr3.1:76821135-76821154 None:intergenic 30.0%
TTCCTGAAGATGTTGAAATA+TGG + chr3.1:76821130-76821149 MS.gene054971:CDS 30.0%
TTTACAATGTTTACTCGATG+TGG + chr3.1:76820318-76820337 MS.gene054971:intron 30.0%
! AAGTCTTATCTAAACGGATT+GGG + chr3.1:76822017-76822036 MS.gene054971:CDS 30.0%
! TCAATTGTCATTTCATTCTC+TGG + chr3.1:76819323-76819342 MS.gene054971:intron 30.0%
! TCTTTTCAAAGGTTCAGAAA+AGG + chr3.1:76822363-76822382 MS.gene054971:CDS 30.0%
! TTTTGCTAATGCTTATTTGG+TGG + chr3.1:76822439-76822458 MS.gene054971:intron 30.0%
!! AAGTTTGCTGGTTATTAATG+TGG - chr3.1:76822409-76822428 None:intergenic 30.0%
!! AGTTTGCTGGTTATTAATGT+GGG - chr3.1:76822408-76822427 None:intergenic 30.0%
!! CAGATTTTTAAAGGCTATAC+TGG - chr3.1:76819718-76819737 None:intergenic 30.0%
!! TGGTTTTGCTAATGCTTATT+TGG + chr3.1:76822436-76822455 MS.gene054971:intron 30.0%
!! TTGTTATACAGCTATTTTGG+TGG + chr3.1:76820811-76820830 MS.gene054971:intron 30.0%
!!! TGTTATACAGCTATTTTGGT+GGG + chr3.1:76820812-76820831 MS.gene054971:intron 30.0%
AAACAATTTACAACTGCAGG+TGG + chr3.1:76821027-76821046 MS.gene054971:intron 35.0%
AAAGAATCTGATGAAAACGC+TGG + chr3.1:76818914-76818933 MS.gene054971:intron 35.0%
AAAGTTTGTAATGTTACCGC+TGG + chr3.1:76819115-76819134 MS.gene054971:CDS 35.0%
AAATAACAAAGACAGCGAAG+AGG + chr3.1:76818736-76818755 MS.gene054971:intron 35.0%
AAGACCCCGTTCATAAATAA+TGG - chr3.1:76822267-76822286 None:intergenic 35.0%
AAGGATCAAGTTAATGGAGT+TGG + chr3.1:76821293-76821312 MS.gene054971:CDS 35.0%
AATGAAACTACGACACAAAC+TGG + chr3.1:76819016-76819035 MS.gene054971:intron 35.0%
ACAAACAATTTCTTCACTCC+AGG - chr3.1:76819868-76819887 None:intergenic 35.0%
ACACGTGTTATACTAGATGT+TGG + chr3.1:76820415-76820434 MS.gene054971:CDS 35.0%
ACTTCTTCTGATAAAGAAGC+TGG - chr3.1:76820248-76820267 None:intergenic 35.0%
AGAAAACACCATGTCAGTTA+AGG - chr3.1:76821430-76821449 None:intergenic 35.0%
AGACCCCGTTCATAAATAAT+GGG - chr3.1:76822266-76822285 None:intergenic 35.0%
AGATAGTAATGTAGAGGAGA+AGG + chr3.1:76818874-76818893 MS.gene054971:intron 35.0%
AGCAGAGTCAAAGAATGAAA+AGG + chr3.1:76819057-76819076 MS.gene054971:CDS 35.0%
ATCAGCAAGGATCAAGTTAA+TGG + chr3.1:76821287-76821306 MS.gene054971:CDS 35.0%
ATCTTGTTGATCTAAGCTTG+TGG + chr3.1:76819793-76819812 MS.gene054971:intron 35.0%
CAAAATTGGGTGAAAGTTAC+GGG + chr3.1:76819439-76819458 MS.gene054971:CDS 35.0%
CAATCCGTTTAGATAAGACT+TGG - chr3.1:76822018-76822037 None:intergenic 35.0%
CATTGTAATACCATATCTGC+AGG - chr3.1:76819384-76819403 None:intergenic 35.0%
CCCTTCCCATTATTTATGAA+CGG + chr3.1:76822258-76822277 MS.gene054971:CDS 35.0%
CCTTCCCATTATTTATGAAC+GGG + chr3.1:76822259-76822278 MS.gene054971:CDS 35.0%
CTTCCCATTATTTATGAACG+GGG + chr3.1:76822260-76822279 MS.gene054971:CDS 35.0%
GAATTCAGTGGTCAAATGTA+CGG + chr3.1:76822039-76822058 MS.gene054971:CDS 35.0%
GATATGAACTCAATCTATGG+AGG + chr3.1:76822071-76822090 MS.gene054971:CDS 35.0%
GGTAAGAAAACAGAAGATGA+AGG + chr3.1:76818701-76818720 MS.gene054971:intron 35.0%
GTTATACTAGATGTTGGATG+TGG + chr3.1:76820421-76820440 MS.gene054971:CDS 35.0%
TAATTTCCTCTATTGGCAGT+TGG - chr3.1:76820073-76820092 None:intergenic 35.0%
TATCAGCAGCAAAATCTTCA+GGG - chr3.1:76821971-76821990 None:intergenic 35.0%
TATTCCTTCCTTAACTGACA+TGG + chr3.1:76821419-76821438 MS.gene054971:intron 35.0%
TCAGGAAGCTTCTGATAAAT+AGG - chr3.1:76821117-76821136 None:intergenic 35.0%
TCGTTGCTCATAACAATCAT+TGG - chr3.1:76821345-76821364 None:intergenic 35.0%
TCTTGTTGATCTAAGCTTGT+GGG + chr3.1:76819794-76819813 MS.gene054971:intron 35.0%
TGACAACCAATATGGTACAT+TGG - chr3.1:76821916-76821935 None:intergenic 35.0%
TGCATCATCAAAGCTCTATT+AGG - chr3.1:76820364-76820383 None:intergenic 35.0%
TGCTGTGTAATTCAAACACA+TGG - chr3.1:76820912-76820931 None:intergenic 35.0%
TGTGACAACTTGACAAGTTA+GGG - chr3.1:76819665-76819684 None:intergenic 35.0%
TTATCAGCAGCAAAATCTTC+AGG - chr3.1:76821972-76821991 None:intergenic 35.0%
TTGAAAAGAGATGATCTGCA+TGG - chr3.1:76822352-76822371 None:intergenic 35.0%
TTGCTGCTGATAATAAACAC+TGG + chr3.1:76821979-76821998 MS.gene054971:CDS 35.0%
! ATTTATGAACGGGGTCTTTT+TGG + chr3.1:76822269-76822288 MS.gene054971:CDS 35.0%
! CAAGTCTTATCTAAACGGAT+TGG + chr3.1:76822016-76822035 MS.gene054971:CDS 35.0%
! CCGTTCATAAATAATGGGAA+GGG - chr3.1:76822261-76822280 None:intergenic 35.0%
! GTGTCCAAGTCTTATCTAAA+CGG + chr3.1:76822011-76822030 MS.gene054971:CDS 35.0%
! TCATCAGATTTTTGACACAG+TGG - chr3.1:76821383-76821402 None:intergenic 35.0%
! TGCAGATCATCTCTTTTCAA+AGG + chr3.1:76822352-76822371 MS.gene054971:CDS 35.0%
!! AAGTTAAGGGGCATCAAAAT+TGG + chr3.1:76819425-76819444 MS.gene054971:CDS 35.0%
!! ACTAAGCTTGCTGAAGTTAA+GGG + chr3.1:76819412-76819431 MS.gene054971:CDS 35.0%
!! AGTTAAGGGGCATCAAAATT+GGG + chr3.1:76819426-76819445 MS.gene054971:CDS 35.0%
!! CAAGAGGTATGCATTTTGTT+TGG + chr3.1:76819532-76819551 MS.gene054971:intron 35.0%
!! GGGAAATATTCTAGAGTAGA+CGG + chr3.1:76818353-76818372 MS.gene054971:CDS 35.0%
!! TGTTATTTCTCCTGCAGATA+TGG + chr3.1:76819371-76819390 MS.gene054971:intron 35.0%
!! TTAACCTTCTCTCTGCTTTT+AGG - chr3.1:76819291-76819310 None:intergenic 35.0%
!! TTTTAAAGGCTATACTGGTG+CGG - chr3.1:76819713-76819732 None:intergenic 35.0%
!!! GTTATACAGCTATTTTGGTG+GGG + chr3.1:76820813-76820832 MS.gene054971:intron 35.0%
AAAAGAGATGATCTGCATGG+AGG - chr3.1:76822349-76822368 None:intergenic 40.0%
AAAGGATGAACATGAAGCTC+AGG + chr3.1:76820504-76820523 MS.gene054971:CDS 40.0%
AACACCATGTCAGTTAAGGA+AGG - chr3.1:76821426-76821445 None:intergenic 40.0%
AAGGAATACCATGCTGCATT+GGG - chr3.1:76821407-76821426 None:intergenic 40.0%
AATCATTTAGCACCTATCCC+AGG + chr3.1:76822312-76822331 MS.gene054971:CDS 40.0%
AGTCTAATCTCTGATGTGAC+AGG + chr3.1:76821799-76821818 MS.gene054971:intron 40.0%
ATATGAACTGCACATCTGTG+AGG + chr3.1:76820158-76820177 MS.gene054971:intron 40.0%
ATCAGCAGCAAAATCTTCAG+GGG - chr3.1:76821970-76821989 None:intergenic 40.0%
CAAAGACCAGAGTTCAAATG+AGG + chr3.1:76818961-76818980 MS.gene054971:intron 40.0%
CAATCGGTAGATGTCAAACA+CGG - chr3.1:76822160-76822179 None:intergenic 40.0%
CCTGCTATATCTGCTGTAAT+GGG + chr3.1:76820553-76820572 MS.gene054971:CDS 40.0%
CTGAAGGAAAGCTTATTGTC+CGG + chr3.1:76822517-76822536 MS.gene054971:CDS 40.0%
CTTACCATAGACTCCAACTT+GGG - chr3.1:76821943-76821962 None:intergenic 40.0%
GACCATACAAAAAAACCACC+AGG - chr3.1:76821087-76821106 None:intergenic 40.0%
GGAATACCTCATTTGAACTC+TGG - chr3.1:76818970-76818989 None:intergenic 40.0%
GGAGAGTAAAAATGAGGTGA+AGG + chr3.1:76818496-76818515 MS.gene054971:CDS 40.0%
GTCAAATGTACGGAATGTCA+TGG + chr3.1:76822049-76822068 MS.gene054971:CDS 40.0%
GTGTGACAACTTGACAAGTT+AGG - chr3.1:76819666-76819685 None:intergenic 40.0%
TAACAAACCCTCCTTATCCT+TGG - chr3.1:76822616-76822635 None:intergenic 40.0%
TAATCGCTTTCCAGTTGTCA+AGG - chr3.1:76819159-76819178 None:intergenic 40.0%
TAGTAATGTAGAGGAGAAGG+TGG + chr3.1:76818877-76818896 MS.gene054971:intron 40.0%
TCCTGCTATATCTGCTGTAA+TGG + chr3.1:76820552-76820571 MS.gene054971:CDS 40.0%
TGAAGGAAAGCTTATTGTCC+GGG + chr3.1:76822518-76822537 MS.gene054971:CDS 40.0%
TGAATACCTTCAATGTGCCA+TGG - chr3.1:76820643-76820662 None:intergenic 40.0%
TGAGCTTCATGTTCATCCTT+TGG - chr3.1:76820505-76820524 None:intergenic 40.0%
TGGGAACTTGACAACCAATA+TGG - chr3.1:76821924-76821943 None:intergenic 40.0%
TTGACAACTGGAAAGCGATT+AGG + chr3.1:76819158-76819177 MS.gene054971:CDS 40.0%
TTTCAAAGCTGCAGCAAATC+TGG - chr3.1:76822189-76822208 None:intergenic 40.0%
TTTCCAATTGTACCCAGTCT+TGG - chr3.1:76819098-76819117 None:intergenic 40.0%
TTTGTCCTGTTGTGCGTAAA+CGG - chr3.1:76820129-76820148 None:intergenic 40.0%
! AACTGGATCGTTTTCTACAC+AGG + chr3.1:76819033-76819052 MS.gene054971:intron 40.0%
! AAGCCTTATCCTACTAAGTG+GGG + chr3.1:76821468-76821487 MS.gene054971:intron 40.0%
! AGGTTCAATTTGCTCTTGAG+AGG + chr3.1:76820524-76820543 MS.gene054971:CDS 40.0%
! ATAGAGCGCTTATATCCTTC+AGG - chr3.1:76819262-76819281 None:intergenic 40.0%
! ATTTTCCTCCGACTTCTCTT+CGG - chr3.1:76818639-76818658 None:intergenic 40.0%
! CAAGCCTTATCCTACTAAGT+GGG + chr3.1:76821467-76821486 MS.gene054971:intron 40.0%
! CCCGTTCATAAATAATGGGA+AGG - chr3.1:76822262-76822281 None:intergenic 40.0%
! CTCATTTGAACTCTGGTCTT+TGG - chr3.1:76818963-76818982 None:intergenic 40.0%
! GGAACTTGTTTCAATCAGCA+AGG + chr3.1:76821274-76821293 MS.gene054971:CDS 40.0%
! GGATAGTGGCTTCTTGTATA+TGG - chr3.1:76821324-76821343 None:intergenic 40.0%
! GGTTCAATTTGCTCTTGAGA+GGG + chr3.1:76820525-76820544 MS.gene054971:CDS 40.0%
! GTTCAATTTGCTCTTGAGAG+GGG + chr3.1:76820526-76820545 MS.gene054971:CDS 40.0%
! TCAAATGAGGTATTCCCTTC+CGG + chr3.1:76818974-76818993 MS.gene054971:intron 40.0%
! TCAGATTTTTGACACAGTGG+AGG - chr3.1:76821380-76821399 None:intergenic 40.0%
! TGCAGGTGGTAAACTTCTTT+TGG + chr3.1:76821041-76821060 MS.gene054971:intron 40.0%
! TGTTTGACATCTACCGATTG+TGG + chr3.1:76822160-76822179 MS.gene054971:intron 40.0%
! TTCAATTTGCTCTTGAGAGG+GGG + chr3.1:76820527-76820546 MS.gene054971:CDS 40.0%
!! AACAGGGCTTTTTATTTGGC+TGG + chr3.1:76821683-76821702 MS.gene054971:intron 40.0%
!! AATAATGGGAAGGGTATCTG+CGG - chr3.1:76822252-76822271 None:intergenic 40.0%
!! CACTAAGCTTGCTGAAGTTA+AGG + chr3.1:76819411-76819430 MS.gene054971:CDS 40.0%
!! CTAAGCTTGCTGAAGTTAAG+GGG + chr3.1:76819413-76819432 MS.gene054971:CDS 40.0%
!! GAGTATCTTACTTTTCCTGG+TGG + chr3.1:76819463-76819482 MS.gene054971:CDS 40.0%
!! GGTGAGTATCTTACTTTTCC+TGG + chr3.1:76819460-76819479 MS.gene054971:CDS 40.0%
!! TAAACGGATTGGGAATTCAG+TGG + chr3.1:76822027-76822046 MS.gene054971:CDS 40.0%
!! TATCTTACTTTTCCTGGTGG+TGG + chr3.1:76819466-76819485 MS.gene054971:CDS 40.0%
!! TCACTTTTCCAAGACAGGAA+GGG - chr3.1:76821631-76821650 None:intergenic 40.0%
!! TTGTTGCTCTAGCCTTGATT+GGG + chr3.1:76818420-76818439 MS.gene054971:CDS 40.0%
!! TTTGTTGCTCTAGCCTTGAT+TGG + chr3.1:76818419-76818438 MS.gene054971:CDS 40.0%
AAGTGCCCCATGCTTGAATT+GGG - chr3.1:76819494-76819513 None:intergenic 45.0%
ACAGTTTAGACCGAACTGGT+AGG + chr3.1:76819929-76819948 MS.gene054971:intron 45.0%
ACCTACTCCAAGGATAAGGA+GGG + chr3.1:76822606-76822625 MS.gene054971:CDS 45.0%
ACTGCATCAAATACTCTCCC+AGG - chr3.1:76820598-76820617 None:intergenic 45.0%
ACTTCAGCAAGCTTAGTGTG+TGG - chr3.1:76819409-76819428 None:intergenic 45.0%
AGAGTTCCATGGCACATTGA+AGG + chr3.1:76820634-76820653 MS.gene054971:CDS 45.0%
AGATACGAAGACAGAAGACG+AGG + chr3.1:76818679-76818698 MS.gene054971:intron 45.0%
AGTTGGAGTCTATGGTAAGC+CGG + chr3.1:76821944-76821963 MS.gene054971:CDS 45.0%
ATATGGTACATTGGTCAGCC+TGG - chr3.1:76821907-76821926 None:intergenic 45.0%
ATCAAATACTCTCCCAGGGA+AGG - chr3.1:76820593-76820612 None:intergenic 45.0%
ATCCTTCAGGAAGAGAGACA+AGG - chr3.1:76819249-76819268 None:intergenic 45.0%
ATCTTCAGAAGACTTCTCCG+TGG - chr3.1:76818663-76818682 None:intergenic 45.0%
ATTCAAGAGTCCTCCAAGAC+TGG + chr3.1:76819082-76819101 MS.gene054971:CDS 45.0%
CAGTTAGTTCAAGTGAACGC+GGG + chr3.1:76821856-76821875 MS.gene054971:CDS 45.0%
CATCATCCAAACCCCAATCA+AGG - chr3.1:76818435-76818454 None:intergenic 45.0%
CATGACCTACTCCAAGGATA+AGG + chr3.1:76822602-76822621 MS.gene054971:CDS 45.0%
CATGGTAAAGTCCATGCAGT+GGG + chr3.1:76822572-76822591 MS.gene054971:CDS 45.0%
CATTAACGAGCTTGAGAGCA+TGG + chr3.1:76822554-76822573 MS.gene054971:CDS 45.0%
CCACTTAGTAGGATAAGGCT+TGG - chr3.1:76821469-76821488 None:intergenic 45.0%
CCAGTTAGTTCAAGTGAACG+CGG + chr3.1:76821855-76821874 MS.gene054971:CDS 45.0%
CCCATTACAGCAGATATAGC+AGG - chr3.1:76820556-76820575 None:intergenic 45.0%
CGGACAATAAGCTTTCCTTC+AGG - chr3.1:76822519-76822538 None:intergenic 45.0%
CGGCAGTTTGAAGATAATCC+TGG + chr3.1:76818569-76818588 MS.gene054971:intron 45.0%
CTGCATCAAATACTCTCCCA+GGG - chr3.1:76820597-76820616 None:intergenic 45.0%
CTTATCCTACTAAGTGGGGT+CGG + chr3.1:76821472-76821491 MS.gene054971:intron 45.0%
CTTCCTGTCTTGGAAAAGTG+AGG + chr3.1:76821630-76821649 MS.gene054971:intron 45.0%
CTTTCCAGTTGTCAAGGCAT+GGG - chr3.1:76819153-76819172 None:intergenic 45.0%
GAACTCTACAACGTGCACAA+TGG - chr3.1:76820621-76820640 None:intergenic 45.0%
GAAGGAATACCATGCTGCAT+TGG - chr3.1:76821408-76821427 None:intergenic 45.0%
GAAGTCGGAGGAAAATTCCA+CGG + chr3.1:76818643-76818662 MS.gene054971:intron 45.0%
GATACGAAGACAGAAGACGA+GGG + chr3.1:76818680-76818699 MS.gene054971:intron 45.0%
GCAAATCTGGAAGCCACAAT+CGG - chr3.1:76822176-76822195 None:intergenic 45.0%
GCTTACCATAGACTCCAACT+TGG - chr3.1:76821944-76821963 None:intergenic 45.0%
GGAAAGCGATTAGGAGTCTT+CGG + chr3.1:76819167-76819186 MS.gene054971:CDS 45.0%
GGATATAAGCGCTCTATGAG+TGG + chr3.1:76819265-76819284 MS.gene054971:CDS 45.0%
GGCTGACCAATGTACCATAT+TGG + chr3.1:76821907-76821926 MS.gene054971:CDS 45.0%
GTCAAGGCATGGGATAAAGT+CGG - chr3.1:76819143-76819162 None:intergenic 45.0%
GTGGAACCCAATTCAAGCAT+GGG + chr3.1:76819485-76819504 MS.gene054971:CDS 45.0%
TAATGACCTCAACAGTGTCC+CGG - chr3.1:76822539-76822558 None:intergenic 45.0%
TACCAGTTCGGTCTAAACTG+TGG - chr3.1:76819930-76819949 None:intergenic 45.0%
TCAAATACTCTCCCAGGGAA+GGG - chr3.1:76820592-76820611 None:intergenic 45.0%
TCAAGGCATGGGATAAAGTC+GGG - chr3.1:76819142-76819161 None:intergenic 45.0%
TCTGTACCAACTGCCAATAG+AGG + chr3.1:76820064-76820083 MS.gene054971:intron 45.0%
TGGAACCCAATTCAAGCATG+GGG + chr3.1:76819486-76819505 MS.gene054971:CDS 45.0%
TGGTTGTCAAGTTCCCAAGT+TGG + chr3.1:76821927-76821946 MS.gene054971:CDS 45.0%
TTAGACCGAACTGGTAGGAA+TGG + chr3.1:76819934-76819953 MS.gene054971:intron 45.0%
TTATCCCATGCCTTGACAAC+TGG + chr3.1:76819146-76819165 MS.gene054971:CDS 45.0%
TTCAAGAGTCCTCCAAGACT+GGG + chr3.1:76819083-76819102 MS.gene054971:CDS 45.0%
TTCTGTAGTTCCCGTGCAAA+AGG + chr3.1:76818463-76818482 MS.gene054971:CDS 45.0%
TTGTCCTGTTGTGCGTAAAC+GGG - chr3.1:76820128-76820147 None:intergenic 45.0%
! AAATGAGGTATTCCCTTCCG+GGG + chr3.1:76818976-76818995 MS.gene054971:intron 45.0%
! ACTTTTCCAAGACAGGAAGG+GGG - chr3.1:76821629-76821648 None:intergenic 45.0%
! AGTTCCCAAGTTGGAGTCTA+TGG + chr3.1:76821936-76821955 MS.gene054971:CDS 45.0%
! ATGTGCCATTCCTACCAGTT+CGG - chr3.1:76819942-76819961 None:intergenic 45.0%
! CAAATGAGGTATTCCCTTCC+GGG + chr3.1:76818975-76818994 MS.gene054971:intron 45.0%
! CACTTTTCCAAGACAGGAAG+GGG - chr3.1:76821630-76821649 None:intergenic 45.0%
! CAGATGCAATCTAGCTTCTC+TGG + chr3.1:76822467-76822486 MS.gene054971:intron 45.0%
! CCAAGCCTTATCCTACTAAG+TGG + chr3.1:76821466-76821485 MS.gene054971:intron 45.0%
! TAATCCTGGTGATTTGCCTG+AGG + chr3.1:76818583-76818602 MS.gene054971:intron 45.0%
! TGCAATGTCACTTGCACCAA+AGG + chr3.1:76820486-76820505 MS.gene054971:CDS 45.0%
!! ACCTCATTTTTACTCTCCCG+AGG - chr3.1:76818494-76818513 None:intergenic 45.0%
!! CTCACTTTTCCAAGACAGGA+AGG - chr3.1:76821632-76821651 None:intergenic 45.0%
!! GTTCCTCACTTTTCCAAGAC+AGG - chr3.1:76821636-76821655 None:intergenic 45.0%
!! TGGAGCTGAACAGAGTATTG+CGG + chr3.1:76821061-76821080 MS.gene054971:CDS 45.0%
!! TGTTGCTCTAGCCTTGATTG+GGG + chr3.1:76818421-76818440 MS.gene054971:CDS 45.0%
!!! ATACAGCTATTTTGGTGGGG+TGG + chr3.1:76820816-76820835 MS.gene054971:intron 45.0%
!!! GGCCTGGTGGTTTTTTTGTA+TGG + chr3.1:76821082-76821101 MS.gene054971:CDS 45.0%
!!! TACAGCTATTTTGGTGGGGT+GGG + chr3.1:76820817-76820836 MS.gene054971:intron 45.0%
AAAGAGAAAGCCTCCGAAGC+TGG - chr3.1:76820452-76820471 None:intergenic 50.0%
ACCCTCCTTATCCTTGGAGT+AGG - chr3.1:76822610-76822629 None:intergenic 50.0%
ACTCTGCCTGACATTGCTTG+GGG + chr3.1:76820385-76820404 MS.gene054971:CDS 50.0%
AGACTCTGCCTGACATTGCT+TGG + chr3.1:76820383-76820402 MS.gene054971:intron 50.0%
CAAGGCATGGGATAAAGTCG+GGG - chr3.1:76819141-76819160 None:intergenic 50.0%
CCAATTGTACCCAGTCTTGG+AGG - chr3.1:76819095-76819114 None:intergenic 50.0%
CCGCGTTCACTTGAACTAAC+TGG - chr3.1:76821858-76821877 None:intergenic 50.0%
CCTCCAAGACTGGGTACAAT+TGG + chr3.1:76819092-76819111 MS.gene054971:CDS 50.0%
CGACCCCACTTAGTAGGATA+AGG - chr3.1:76821474-76821493 None:intergenic 50.0%
CGGTAGATGTCAAACACGGA+AGG - chr3.1:76822156-76822175 None:intergenic 50.0%
CTGATGATCCCAATGCAGCA+TGG + chr3.1:76821396-76821415 MS.gene054971:CDS 50.0%
GAAGGAACAGACTGAGGTGA+GGG + chr3.1:76818514-76818533 MS.gene054971:CDS 50.0%
GACCTACTCCAAGGATAAGG+AGG + chr3.1:76822605-76822624 MS.gene054971:CDS 50.0%
GACTCTGCCTGACATTGCTT+GGG + chr3.1:76820384-76820403 MS.gene054971:intron 50.0%
GCATGGTAAAGTCCATGCAG+TGG + chr3.1:76822571-76822590 MS.gene054971:CDS 50.0%
GCCTCGGGAGAGTAAAAATG+AGG + chr3.1:76818490-76818509 MS.gene054971:CDS 50.0%
GCTTTCCAGTTGTCAAGGCA+TGG - chr3.1:76819154-76819173 None:intergenic 50.0%
GGTGGAACCCAATTCAAGCA+TGG + chr3.1:76819484-76819503 MS.gene054971:CDS 50.0%
GTGCACGTTGTAGAGTTCCA+TGG + chr3.1:76820623-76820642 MS.gene054971:CDS 50.0%
GTGGCCTAAAAGCAGAGAGA+AGG + chr3.1:76819284-76819303 MS.gene054971:CDS 50.0%
TATGTGTCCAGAAGTCCACC+TGG + chr3.1:76822634-76822653 MS.gene054971:CDS 50.0%
TATTGTCCGGGACACTGTTG+AGG + chr3.1:76822530-76822549 MS.gene054971:CDS 50.0%
TGAAGGAACAGACTGAGGTG+AGG + chr3.1:76818513-76818532 MS.gene054971:CDS 50.0%
TGAGGTGAAGGAACAGACTG+AGG + chr3.1:76818508-76818527 MS.gene054971:CDS 50.0%
TGCCACAGTTTAGACCGAAC+TGG + chr3.1:76819925-76819944 MS.gene054971:intron 50.0%
TGCCTTGTCTCTCTTCCTGA+AGG + chr3.1:76819244-76819263 MS.gene054971:CDS 50.0%
TGTCAGCTCCGAAGAGAAGT+CGG + chr3.1:76818628-76818647 MS.gene054971:intron 50.0%
TGTCCTGTTGTGCGTAAACG+GGG - chr3.1:76820127-76820146 None:intergenic 50.0%
TTCAGGAAGAGAGACAAGGC+AGG - chr3.1:76819245-76819264 None:intergenic 50.0%
TTCTTACCCCCTTCCTGTCT+TGG + chr3.1:76821620-76821639 MS.gene054971:intron 50.0%
TTGAATTGGGTTCCACCACC+AGG - chr3.1:76819481-76819500 None:intergenic 50.0%
TTGAGTGTCTCCGTCTCCTT+AGG - chr3.1:76822663-76822682 None:intergenic 50.0%
! CTCTGGTAGCTGAGGTTGAT+CGG + chr3.1:76822484-76822503 MS.gene054971:CDS 50.0%
! CTGAGGTTGATCGGATTCTC+AGG + chr3.1:76822493-76822512 MS.gene054971:CDS 50.0%
! GAAGTGCCCCATGCTTGAAT+TGG - chr3.1:76819495-76819514 None:intergenic 50.0%
! TCTAGCTTCTCTGGTAGCTG+AGG + chr3.1:76822476-76822495 MS.gene054971:CDS 50.0%
! TTTTGGTGGGGTGGGTATGT+TGG + chr3.1:76820825-76820844 MS.gene054971:intron 50.0%
!! CTCTAGCCTTGATTGGGGTT+TGG + chr3.1:76818426-76818445 MS.gene054971:CDS 50.0%
!! CTGCTGTAATGGGCACAAAG+AGG + chr3.1:76820563-76820582 MS.gene054971:CDS 50.0%
ACAAAGAGGCTTCCCTTCCC+TGG + chr3.1:76820577-76820596 MS.gene054971:CDS 55.0%
ACAGACTGAGGTGAGGGAAC+AGG + chr3.1:76818520-76818539 MS.gene054971:CDS 55.0%
ACTAAGTGGGGTCGGCTATG+TGG + chr3.1:76821480-76821499 MS.gene054971:intron 55.0%
ACTGCACATCTGTGAGGCAC+TGG + chr3.1:76820164-76820183 MS.gene054971:intron 55.0%
AGGAAGAGAGACAAGGCAGG+TGG - chr3.1:76819242-76819261 None:intergenic 55.0%
CAAAGAGGCTTCCCTTCCCT+GGG + chr3.1:76820578-76820597 MS.gene054971:CDS 55.0%
CATAGCCGACCCCACTTAGT+AGG - chr3.1:76821480-76821499 None:intergenic 55.0%
CGTTTGCCCCAAGCAATGTC+AGG - chr3.1:76820394-76820413 None:intergenic 55.0%
GATCGGATTCTCAGGCCTGA+AGG + chr3.1:76822501-76822520 MS.gene054971:CDS 55.0%
GCAGCAAAATCTTCAGGGGC+CGG - chr3.1:76821966-76821985 None:intergenic 55.0%
GCATCCTCAGGCAAATCACC+AGG - chr3.1:76818590-76818609 None:intergenic 55.0%
GCTGACATTGCTATCCCCCT+TGG - chr3.1:76818615-76818634 None:intergenic 55.0%
GCTTGTGGGAAGCAGCTCAT+AGG + chr3.1:76819808-76819827 MS.gene054971:intron 55.0%
GGAAGAGAGACAAGGCAGGT+GGG - chr3.1:76819241-76819260 None:intergenic 55.0%
GGATGTGGAGTTGCCAGCTT+CGG + chr3.1:76820436-76820455 MS.gene054971:CDS 55.0%
GGTAAAGTCCATGCAGTGGG+AGG + chr3.1:76822575-76822594 MS.gene054971:CDS 55.0%
GGTCACAGTGGCCAGAAAAG+TGG + chr3.1:76821877-76821896 MS.gene054971:CDS 55.0%
GGTTCGCATGACCTACTCCA+AGG + chr3.1:76822596-76822615 MS.gene054971:CDS 55.0%
TAGAAGCTCAGACTGAGCCC+CGG - chr3.1:76818996-76819015 None:intergenic 55.0%
TTGCCTGAGGATGCGACCAA+GGG + chr3.1:76818596-76818615 MS.gene054971:intron 55.0%
TTGTGCGTAAACGGGGAGGA+GGG - chr3.1:76820120-76820139 None:intergenic 55.0%
TTTGCCTGAGGATGCGACCA+AGG + chr3.1:76818595-76818614 MS.gene054971:intron 55.0%
!! AACAGAGTATTGCGGCCTGG+TGG + chr3.1:76821069-76821088 MS.gene054971:CDS 55.0%
!! CAGCGAAGAGGCGTCTACTA+AGG + chr3.1:76818748-76818767 MS.gene054971:intron 55.0%
!! CTGAACAGAGTATTGCGGCC+TGG + chr3.1:76821066-76821085 MS.gene054971:CDS 55.0%
AGAGAGACAAGGCAGGTGGG+AGG - chr3.1:76819238-76819257 None:intergenic 60.0%
AGGCAGGTGGGAGGTTCTTC+AGG - chr3.1:76819229-76819248 None:intergenic 60.0%
CAAGTGAACGCGGGTCACAG+TGG + chr3.1:76821865-76821884 MS.gene054971:CDS 60.0%
CAGCTCCGAAGAGAAGTCGG+AGG + chr3.1:76818631-76818650 MS.gene054971:intron 60.0%
CATGCGAACCTCCCACTGCA+TGG - chr3.1:76822586-76822605 None:intergenic 60.0%
CCGTGCAAAAGGTCGTGCCT+CGG + chr3.1:76818474-76818493 MS.gene054971:CDS 60.0%
CCTCCCCGTTTACGCACAAC+AGG + chr3.1:76820121-76820140 MS.gene054971:intron 60.0%
CCTGTTGTGCGTAAACGGGG+AGG - chr3.1:76820124-76820143 None:intergenic 60.0%
CGTGCAAAAGGTCGTGCCTC+GGG + chr3.1:76818475-76818494 MS.gene054971:CDS 60.0%
GGTACATTGGTCAGCCTGGC+TGG - chr3.1:76821903-76821922 None:intergenic 60.0%
GTGTCCAGAAGTCCACCTGG+CGG + chr3.1:76822637-76822656 MS.gene054971:CDS 60.0%
GTTGTGCGTAAACGGGGAGG+AGG - chr3.1:76820121-76820140 None:intergenic 60.0%
TGCCTGAGGATGCGACCAAG+GGG + chr3.1:76818597-76818616 MS.gene054971:intron 60.0%
TGGGATAAAGTCGGGGCCAG+CGG - chr3.1:76819134-76819153 None:intergenic 60.0%
TGTGCGTAAACGGGGAGGAG+GGG - chr3.1:76820119-76820138 None:intergenic 60.0%
TGTGGAGTTGCCAGCTTCGG+AGG + chr3.1:76820439-76820458 MS.gene054971:CDS 60.0%
! CCGAGGCACGACCTTTTGCA+CGG - chr3.1:76818477-76818496 None:intergenic 60.0%
! CGAGGCACGACCTTTTGCAC+GGG - chr3.1:76818476-76818495 None:intergenic 60.0%
!!! AGCCTGGCTGGCCACTTTTC+TGG - chr3.1:76821891-76821910 None:intergenic 60.0%
AGCTCAGACTGAGCCCCGGA+AGG - chr3.1:76818992-76819011 None:intergenic 65.0%
CACCTGGCGGCCTAAGGAGA+CGG + chr3.1:76822650-76822669 MS.gene054971:CDS 65.0%
GAAGTCCACCTGGCGGCCTA+AGG + chr3.1:76822644-76822663 MS.gene054971:CDS 65.0%
GCCTGAGGATGCGACCAAGG+GGG + chr3.1:76818598-76818617 MS.gene054971:intron 65.0%
GCTCAGACTGAGCCCCGGAA+GGG - chr3.1:76818991-76819010 None:intergenic 65.0%
GGCCAGAAAAGTGGCCAGCC+AGG + chr3.1:76821886-76821905 MS.gene054971:CDS 65.0%
GTGCGTAAACGGGGAGGAGG+GGG - chr3.1:76820118-76820137 None:intergenic 65.0%
TCCCCCTTGGTCGCATCCTC+AGG - chr3.1:76818602-76818621 None:intergenic 65.0%
TGCGTAAACGGGGAGGAGGG+GGG - chr3.1:76820117-76820136 None:intergenic 65.0%
! TAGGCCGCCAGGTGGACTTC+TGG - chr3.1:76822644-76822663 None:intergenic 65.0%
CGTCTCCTTAGGCCGCCAGG+TGG - chr3.1:76822652-76822671 None:intergenic 70.0%
CTCCGTCTCCTTAGGCCGCC+AGG - chr3.1:76822655-76822674 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 76818344 76822682 76818344 ID=MS.gene054971
chr3.1 mRNA 76818344 76822682 76818344 ID=MS.gene054971.t1;Parent=MS.gene054971
chr3.1 exon 76818344 76818541 76818344 ID=MS.gene054971.t1.exon1;Parent=MS.gene054971.t1
chr3.1 CDS 76818344 76818541 76818344 ID=cds.MS.gene054971.t1;Parent=MS.gene054971.t1
chr3.1 exon 76819055 76819321 76819055 ID=MS.gene054971.t1.exon2;Parent=MS.gene054971.t1
chr3.1 CDS 76819055 76819321 76819055 ID=cds.MS.gene054971.t1;Parent=MS.gene054971.t1
chr3.1 exon 76819388 76819537 76819388 ID=MS.gene054971.t1.exon3;Parent=MS.gene054971.t1
chr3.1 CDS 76819388 76819537 76819388 ID=cds.MS.gene054971.t1;Parent=MS.gene054971.t1
chr3.1 exon 76820385 76820655 76820385 ID=MS.gene054971.t1.exon4;Parent=MS.gene054971.t1
chr3.1 CDS 76820385 76820655 76820385 ID=cds.MS.gene054971.t1;Parent=MS.gene054971.t1
chr3.1 exon 76821046 76821156 76821046 ID=MS.gene054971.t1.exon5;Parent=MS.gene054971.t1
chr3.1 CDS 76821046 76821156 76821046 ID=cds.MS.gene054971.t1;Parent=MS.gene054971.t1
chr3.1 exon 76821243 76821417 76821243 ID=MS.gene054971.t1.exon6;Parent=MS.gene054971.t1
chr3.1 CDS 76821243 76821417 76821243 ID=cds.MS.gene054971.t1;Parent=MS.gene054971.t1
chr3.1 exon 76821821 76822093 76821821 ID=MS.gene054971.t1.exon7;Parent=MS.gene054971.t1
chr3.1 CDS 76821821 76822093 76821821 ID=cds.MS.gene054971.t1;Parent=MS.gene054971.t1
chr3.1 exon 76822190 76822384 76822190 ID=MS.gene054971.t1.exon8;Parent=MS.gene054971.t1
chr3.1 CDS 76822190 76822384 76822190 ID=cds.MS.gene054971.t1;Parent=MS.gene054971.t1
chr3.1 exon 76822470 76822682 76822470 ID=MS.gene054971.t1.exon9;Parent=MS.gene054971.t1
chr3.1 CDS 76822470 76822682 76822470 ID=cds.MS.gene054971.t1;Parent=MS.gene054971.t1
Gene Sequence

>MS.gene054971

ATGGCTTTAGGGAAATATTCTAGAGTAGACGGTAGAAGATCGTCGAGTTACTGTTCAACAGTGACTATAGTTGTGTTTGTTGCTCTAGCCTTGATTGGGGTTTGGATGATGACATCATCTTCTGTAGTTCCCGTGCAAAAGGTCGTGCCTCGGGAGAGTAAAAATGAGGTGAAGGAACAGACTGAGGTGAGGGAACAGGTGAGTGAAACTGATAATAGCAATGCTCGGCAGTTTGAAGATAATCCTGGTGATTTGCCTGAGGATGCGACCAAGGGGGATAGCAATGTCAGCTCCGAAGAGAAGTCGGAGGAAAATTCCACGGAGAAGTCTTCTGAAGATACGAAGACAGAAGACGAGGGTAAGAAAACAGAAGATGAAGGCTCCAATACAGAAAATAACAAAGACAGCGAAGAGGCGTCTACTAAGGAATCTGAATCTGATGAGAGTGAAAAGAAAGATGAATCAGAGGAGAACAACAAGTCTGATTCAGATGAAAGTGAAAAGAAATCTAGTGACTCGAATGAAACAACAGATAGTAATGTAGAGGAGAAGGTGGAACAAAGCGAGAACAAAGAATCTGATGAAAACGCTGGTGAGAAGAATACAGATGATAATGCCAAAGACCAGAGTTCAAATGAGGTATTCCCTTCCGGGGCTCAGTCTGAGCTTCTAAATGAAACTACGACACAAACTGGATCGTTTTCTACACAGGCAGCAGAGTCAAAGAATGAAAAGGAGATTCAAGAGTCCTCCAAGACTGGGTACAATTGGAAAGTTTGTAATGTTACCGCTGGCCCCGACTTTATCCCATGCCTTGACAACTGGAAAGCGATTAGGAGTCTTCGGAGCACTAAACACTATGAACATCGAGAAAGACACTGTCCTGAAGAACCTCCCACCTGCCTTGTCTCTCTTCCTGAAGGATATAAGCGCTCTATGAGTGGCCTAAAAGCAGAGAGAAGGTTAAAATCAAATCTTGTCAATTGTCATTTCATTCTCTGGTTGTTTTCTTTTTCCTAAAATTATATGTTATTTCTCCTGCAGATATGGTATTACAATGTTCCACACACTAAGCTTGCTGAAGTTAAGGGGCATCAAAATTGGGTGAAAGTTACGGGTGAGTATCTTACTTTTCCTGGTGGTGGAACCCAATTCAAGCATGGGGCACTTCATTACATTGACTTTATACAAGAGGTATGCATTTTGTTTGGATTAAATTTGGCATTTATTTGCTGCTTTTGTATTTAATTTTTCCAAAAATTTCTGTTTAACTTGTATATTATCTGAACTTTCAAGATCAATATATAATCAATGTAATCCCTAACTTGTCAAGTTGTCACACCCTTTTAAGAAAAAGAAAAAATCACCGCACCAGTATAGCCTTTAAAAATCTGTTAATATTGGAATGAAAAAAAATATTATGGCAATTCAACTCTATAGAGCGTAAAAATCTTGTTGATCTAAGCTTGTGGGAAGCAGCTCATAGGTAGCTTCTCGTCCAAGTTTCTCTTTATTATGATACCTGGAGTGAAGAAATTGTTTGTTGCTATCTCAACACAATTATGATTATTTTTCATGTTCTGCCACAGTTTAGACCGAACTGGTAGGAATGGCACATATGATCTGCATTGACTAATAAACAAATAGTAAATGAGATACAAAAATTGCAGTTCAACTATAGTATTGAATTTGAGTAGACCTGAAAGTTCTTCAATGACTTTCTGTACCAACTGCCAATAGAGGAAATTAAGATACGTTGGATGATAAAATCCCCCCTCCTCCCCGTTTACGCACAACAGGACAAATCCTAATACATATGAACTGCACATCTGTGAGGCACTGGATGACAACCAAAATTTACCATGATATTGATTTACCTTCATTAAATGATCTTCTACAAACCAGCTTCTTTATCAGAAGAAGTTATGTGAAATCTACATACTTTCATCTTAAACTTTTTTTAGATTTCTAGAATTTACAATGTTTACTCGATGTGGACGAGCAGTCAAGCATTTTACCTAATAGAGCTTTGATGATGCAGACTCTGCCTGACATTGCTTGGGGCAAACGCACACGTGTTATACTAGATGTTGGATGTGGAGTTGCCAGCTTCGGAGGCTTTCTCTTTGATAGAGATGTACTTGCAATGTCACTTGCACCAAAGGATGAACATGAAGCTCAGGTTCAATTTGCTCTTGAGAGGGGGATTCCTGCTATATCTGCTGTAATGGGCACAAAGAGGCTTCCCTTCCCTGGGAGAGTATTTGATGCAGTCCATTGTGCACGTTGTAGAGTTCCATGGCACATTGAAGGTATTCAGATTACACAGATTCTGTTTACATGATTAGATTAGTTTATTATATAGAATTTTGAATCGTATTCATTTAGGCATTTATCAATCTTAACTTGGTATATAAATTGTAGCGACAGACAACATATAATACATGTAAATGTCACTGGATTTTGTTTGTTATACAGCTATTTTGGTGGGGTGGGTATGTTGGATTATTTTACGTTATTCTTACTATCAAGATGAAGAGAAAAATGTGTGACGTTTGATGAAATCCATGTGTTTGAATTACACAGCAGAGACTCTACTATTTATATGCAATAATTATGAGAATCACCAATATCCTAGTTAACATGATTACTAGATTTGATTACCTTATTTACATGTAAACAAAAACAATTTACAACTGCAGGTGGTAAACTTCTTTTGGAGCTGAACAGAGTATTGCGGCCTGGTGGTTTTTTTGTATGGTCTGCGACTCCTATTTATCAGAAGCTTCCTGAAGATGTTGAAATATGGAATGGTAAATAATAATAACTAGTCATGTGTTCCTTTTTTGTGCATTTTAATGTAGGTTTTCAATCTTGACATTTATGAATTTGTTAACAGCGATGAAAGCATTAACAAAATCAATATGCTGGGAACTTGTTTCAATCAGCAAGGATCAAGTTAATGGAGTTGGTGTAGCCATATACAAGAAGCCACTATCCAATGATTGTTATGAGCAACGATCAAAGAATGAGCCTCCACTGTGTCAAAAATCTGATGATCCCAATGCAGCATGGTATTCCTTCCTTAACTGACATGGTGTTTTCTTAAGCAATAACAACAACCAAGCCTTATCCTACTAAGTGGGGTCGGCTATGTGGTTTTTTTAAAGCAAAAACCAAAATAGAAATTTATATTTTGCCGAGTTAATTGCTGAATTAGTCTTTGATTGCAGTCGCTTACACTGAGAAAACTTTAAAAACAGAGCTGATAGTTGCTTCTTACCCCCTTCCTGTCTTGGAAAAGTGAGGAACATTTGTATAAAACAAGTATAAAAATAAAACAGGGCTTTTTATTTGGCTGGAGACTTAGATGTTTCTGCTGCAAATGAACAATTATTGTACTTCGAGATTTATCTGCGAAATTTTCAATTACACTAGTATTATAATGTTCATGCAGTCTAATCTCTGATGTGACAGGTATATTAAATTGCAAGCATGCATACACAAAGTGCCAGTTAGTTCAAGTGAACGCGGGTCACAGTGGCCAGAAAAGTGGCCAGCCAGGCTGACCAATGTACCATATTGGTTGTCAAGTTCCCAAGTTGGAGTCTATGGTAAGCCGGCCCCTGAAGATTTTGCTGCTGATAATAAACACTGGAAACGTGTAGTGTCCAAGTCTTATCTAAACGGATTGGGAATTCAGTGGTCAAATGTACGGAATGTCATGGATATGAACTCAATCTATGGAGGGTGAGCAAAAATCATTGTTTCAAATATTATTGTGAACTATTATATACTTACTAATATGTCCTTCCGTGTTTGACATCTACCGATTGTGGCTTCCAGATTTGCTGCAGCTTTGAAAGATTTGAATATTTGGGTCATGAATGTAGTTTCAATAGACTCCGCAGATACCCTTCCCATTATTTATGAACGGGGTCTTTTTGGTATATATCATGATTGGTGTGAATCATTTAGCACCTATCCCAGGACGTATGATCTCCTCCATGCAGATCATCTCTTTTCAAAGGTTCAGAAAAGGTGAAAATAATTATTTCATTCCCACATTAATAACCAGCAAACTTTTTATTATGGTTTTGCTAATGCTTATTTGGTGGTCACGCAGATGCAATCTAGCTTCTCTGGTAGCTGAGGTTGATCGGATTCTCAGGCCTGAAGGAAAGCTTATTGTCCGGGACACTGTTGAGGTCATTAACGAGCTTGAGAGCATGGTAAAGTCCATGCAGTGGGAGGTTCGCATGACCTACTCCAAGGATAAGGAGGGTTTGTTATGTGTCCAGAAGTCCACCTGGCGGCCTAAGGAGACGGAGACACTCAA
Protein sequence

>MS.gene054971.t1

MALGKYSRVDGRRSSSYCSTVTIVVFVALALIGVWMMTSSSVVPVQKVVPRESKNEVKEQTEVREQAAESKNEKEIQESSKTGYNWKVCNVTAGPDFIPCLDNWKAIRSLRSTKHYEHRERHCPEEPPTCLVSLPEGYKRSMSGLKAERRLKSNLIWYYNVPHTKLAEVKGHQNWVKVTGEYLTFPGGGTQFKHGALHYIDFIQETLPDIAWGKRTRVILDVGCGVASFGGFLFDRDVLAMSLAPKDEHEAQVQFALERGIPAISAVMGTKRLPFPGRVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFVWSATPIYQKLPEDVEIWNAMKALTKSICWELVSISKDQVNGVGVAIYKKPLSNDCYEQRSKNEPPLCQKSDDPNAAWYIKLQACIHKVPVSSSERGSQWPEKWPARLTNVPYWLSSSQVGVYGKPAPEDFAADNKHWKRVVSKSYLNGLGIQWSNVRNVMDMNSIYGGFAAALKDLNIWVMNVVSIDSADTLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADHLFSKVQKRCNLASLVAEVDRILRPEGKLIVRDTVEVINELESMVKSMQWEVRMTYSKDKEGLLCVQKSTWRPKETETL