AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054969

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054969.t1 MTR_3g096480 98.032 559 10 1 55 612 226 784 0.0 1161
MS.gene054969.t1 MTR_3g096480 78.571 84 17 1 1 83 1 84 4.99e-29 123
MS.gene054969.t1 MTR_8g093880 81.818 561 99 2 55 612 254 814 0.0 1007
MS.gene054969.t1 MTR_8g093880 64.384 73 23 3 1 72 1 71 3.45e-17 85.9
MS.gene054969.t1 MTR_5g021100 69.474 570 162 3 46 607 271 836 0.0 880
MS.gene054969.t1 MTR_3g088790 69.982 553 159 3 66 612 199 750 0.0 859
MS.gene054969.t1 MTR_8g076650 66.968 554 165 4 66 606 344 892 0.0 816
MS.gene054969.t1 MTR_5g083150 53.005 549 246 4 59 606 63 600 0.0 632
MS.gene054969.t1 MTR_3g071530 54.876 523 221 5 85 607 142 649 0.0 603
MS.gene054969.t1 MTR_1g022255 49.374 559 259 6 52 606 163 701 0.0 587
MS.gene054969.t1 MTR_1g029730 48.911 505 240 9 86 583 141 634 1.33e-170 501
MS.gene054969.t1 MTR_5g080720 48.290 497 241 8 96 587 134 619 8.14e-169 495
MS.gene054969.t1 MTR_3g068990 45.591 533 266 10 60 587 134 647 1.35e-168 496
MS.gene054969.t1 MTR_5g080720 49.231 455 215 8 96 545 134 577 4.07e-153 453
MS.gene054969.t1 MTR_1g442840 45.896 536 252 15 96 609 101 620 6.32e-152 452
MS.gene054969.t1 MTR_1g442840 46.967 511 239 12 117 609 11 507 3.02e-151 446
MS.gene054969.t1 MTR_1g069785 45.779 533 257 13 96 609 71 590 5.75e-150 446
MS.gene054969.t1 MTR_8g432620 42.830 523 266 12 96 604 97 600 6.32e-145 433
MS.gene054969.t1 MTR_1g075900 43.750 528 265 11 96 604 100 614 3.84e-143 429
MS.gene054969.t1 MTR_7g076150 40.917 545 286 12 76 605 65 588 1.73e-142 426
MS.gene054969.t1 MTR_8g100075 42.056 535 276 14 89 604 101 620 2.83e-139 419
MS.gene054969.t1 MTR_0019s0120 42.830 530 265 16 96 604 114 626 7.10e-139 419
MS.gene054969.t1 MTR_1g101370 40.164 610 319 21 23 604 26 617 4.70e-138 416
MS.gene054969.t1 MTR_8g071280 41.856 528 270 12 96 604 79 588 1.09e-137 414
MS.gene054969.t1 MTR_5g026930 42.509 534 268 14 96 609 81 595 1.25e-137 414
MS.gene054969.t1 MTR_7g006060 43.849 504 257 9 96 584 52 544 9.33e-137 411
MS.gene054969.t1 MTR_8g055840 39.165 623 335 20 3 604 1 600 2.46e-135 409
MS.gene054969.t1 MTR_4g098890 42.857 581 279 16 27 592 45 587 3.11e-135 432
MS.gene054969.t1 MTR_8g432680 40.631 539 280 16 96 610 114 636 1.23e-133 405
MS.gene054969.t1 MTR_1g022255 44.755 429 214 5 52 477 163 571 1.32e-131 398
MS.gene054969.t1 MTR_7g076170 40.497 563 293 18 72 610 87 631 4.94e-131 398
MS.gene054969.t1 MTR_5g040360 42.015 526 269 13 96 604 93 599 2.96e-130 395
MS.gene054969.t1 MTR_3g040370 41.651 533 272 15 96 611 94 604 5.27e-128 389
MS.gene054969.t1 MTR_7g076150 41.685 463 239 9 156 605 1 445 3.74e-125 377
MS.gene054969.t1 MTR_1g051055 39.700 534 272 14 96 604 95 603 1.68e-118 365
MS.gene054969.t1 MTR_5g026930 42.694 438 215 13 96 516 81 499 3.65e-106 330
MS.gene054969.t1 MTR_0019s0120 41.781 438 221 14 96 516 114 534 5.37e-106 330
MS.gene054969.t1 MTR_5g064080 32.013 631 345 18 17 605 83 671 3.85e-95 306
MS.gene054969.t1 MTR_3g074780 31.587 630 349 21 22 605 96 689 7.58e-88 287
MS.gene054969.t1 MTR_4g083030 31.751 611 350 21 19 598 25 599 2.02e-82 271
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054969.t1 AT5G64030 79.235 549 112 1 66 612 276 824 0.0 956
MS.gene054969.t1 AT5G64030 60.317 63 22 2 1 60 1 63 1.56e-13 74.3
MS.gene054969.t1 AT1G29470 73.966 580 142 3 38 612 190 765 0.0 924
MS.gene054969.t1 AT1G29470 73.966 580 142 3 38 612 190 765 0.0 924
MS.gene054969.t1 AT3G51070 71.353 569 153 2 49 610 330 895 0.0 904
MS.gene054969.t1 AT2G34300 70.660 576 159 3 46 612 191 765 0.0 898
MS.gene054969.t1 AT2G34300 70.660 576 159 3 46 612 191 765 0.0 898
MS.gene054969.t1 AT2G34300 70.660 576 159 3 46 612 191 765 0.0 898
MS.gene054969.t1 AT3G51070 73.453 501 123 2 49 542 330 827 0.0 824
MS.gene054969.t1 AT2G40280 54.095 525 224 6 86 610 80 587 0.0 610
MS.gene054969.t1 AT3G56080 50.751 599 260 11 22 606 33 610 0.0 602
MS.gene054969.t1 AT1G19430 50.758 528 239 6 81 606 216 724 0.0 581
MS.gene054969.t1 AT1G19430 50.758 528 239 6 81 606 216 724 0.0 581
MS.gene054969.t1 AT3G56080 51.589 535 228 10 22 542 33 550 0.0 549
MS.gene054969.t1 AT5G06050 46.055 545 266 12 52 587 118 643 4.07e-172 505
MS.gene054969.t1 AT1G77260 46.565 524 262 9 66 583 120 631 2.89e-171 502
MS.gene054969.t1 AT2G39750 48.089 497 242 9 96 587 186 671 1.18e-169 499
MS.gene054969.t1 AT3G23300 44.382 534 262 13 96 609 88 606 8.43e-148 441
MS.gene054969.t1 AT3G23300 44.382 534 262 13 96 609 88 606 8.43e-148 441
MS.gene054969.t1 AT4G14360 45.833 504 242 13 96 584 85 572 3.76e-147 439
MS.gene054969.t1 AT4G14360 45.833 504 242 13 96 584 85 572 3.76e-147 439
MS.gene054969.t1 AT4G00740 41.954 522 270 10 98 605 92 594 1.57e-144 432
MS.gene054969.t1 AT4G00740 41.954 522 270 10 98 605 92 594 1.57e-144 432
MS.gene054969.t1 AT1G04430 45.472 508 240 14 96 585 93 581 1.37e-143 430
MS.gene054969.t1 AT1G04430 45.472 508 240 14 96 585 93 581 1.37e-143 430
MS.gene054969.t1 AT1G04430 45.472 508 240 14 96 585 93 581 1.37e-143 430
MS.gene054969.t1 AT4G10440 41.187 556 292 14 69 604 76 616 1.46e-142 428
MS.gene054969.t1 AT1G31850 42.135 534 262 13 96 604 85 596 6.68e-142 425
MS.gene054969.t1 AT1G31850 42.135 534 262 13 96 604 85 596 6.68e-142 425
MS.gene054969.t1 AT1G31850 42.135 534 262 13 96 604 85 596 6.68e-142 425
MS.gene054969.t1 AT1G31850 42.135 534 262 13 96 604 85 596 6.68e-142 425
MS.gene054969.t1 AT1G33170 41.547 556 291 13 69 604 93 634 1.16e-141 426
MS.gene054969.t1 AT5G14430 41.973 598 306 17 5 584 2 576 7.98e-140 420
MS.gene054969.t1 AT4G19120 42.351 536 258 15 96 604 79 590 2.11e-139 419
MS.gene054969.t1 AT4G19120 42.351 536 258 15 96 604 79 590 2.11e-139 419
MS.gene054969.t1 AT5G14430 41.472 598 309 17 5 584 2 576 1.82e-137 414
MS.gene054969.t1 AT1G26850 42.724 536 272 15 96 611 95 615 5.03e-137 413
MS.gene054969.t1 AT1G26850 42.724 536 272 15 96 611 95 615 5.03e-137 413
MS.gene054969.t1 AT2G45750 38.925 614 326 21 3 587 1 594 4.61e-136 411
MS.gene054969.t1 AT1G19430 46.867 399 192 5 81 478 216 595 1.13e-132 402
MS.gene054969.t1 AT5G04060 41.935 527 267 12 96 604 92 597 3.42e-128 390
MS.gene054969.t1 AT4G18030 42.329 541 270 16 85 604 84 603 3.75e-128 390
MS.gene054969.t1 AT4G00750 41.326 513 260 17 118 604 125 622 3.93e-128 391
MS.gene054969.t1 AT2G43200 42.188 512 264 14 96 592 100 594 2.76e-127 388
MS.gene054969.t1 AT2G43200 42.188 512 264 14 96 592 100 594 2.76e-127 388
MS.gene054969.t1 AT3G10200 41.176 527 273 14 96 604 81 588 1.17e-125 383
MS.gene054969.t1 AT3G10200 41.247 497 258 13 96 577 81 558 2.51e-119 367
MS.gene054969.t1 AT4G19120 42.247 445 209 14 96 516 79 499 5.63e-109 337
MS.gene054969.t1 AT1G26850 41.204 432 216 14 96 512 95 503 1.99e-94 299
MS.gene054969.t1 AT1G78240 30.609 624 356 21 21 601 87 676 8.54e-87 285
MS.gene054969.t1 AT1G78240 30.609 624 356 21 21 601 87 676 8.54e-87 285
MS.gene054969.t1 AT1G13860 33.948 542 289 19 96 601 90 598 6.54e-81 267
MS.gene054969.t1 AT1G13860 33.948 542 289 19 96 601 90 598 6.54e-81 267
MS.gene054969.t1 AT1G13860 33.948 542 289 19 96 601 90 598 6.54e-81 267
MS.gene054969.t1 AT1G13860 33.948 542 289 19 96 601 90 598 6.54e-81 267
MS.gene054969.t1 AT2G03480 34.030 526 295 16 97 601 96 590 3.18e-76 254
MS.gene054969.t1 AT2G03480 33.459 532 301 16 97 601 96 601 2.27e-75 252
MS.gene054969.t1 AT1G13860 36.779 416 218 14 212 601 46 442 5.18e-75 247
MS.gene054969.t1 AT2G03480 31.847 314 185 9 97 394 96 396 1.50e-34 136

Find 182 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGAAAGATTTGAATATT+TGG 0.164392 3.1:+76787482 MS.gene054969:CDS
TGCAGGTGGTAAACTTCTTT+TGG 0.230174 3.1:+76786323 MS.gene054969:intron
CAATCCGAAGACATGGCTTT+AGG 0.255854 3.1:+76783612 None:intergenic
GGATAGTGGCTTCTTGTATA+TGG 0.279107 3.1:-76786603 None:intergenic
AAGACCCCGTTCATAAATAA+TGG 0.282831 3.1:-76787545 None:intergenic
CTCTAGCCTTGATTGGGGTT+TGG 0.283882 3.1:+76783706 MS.gene054969:CDS
TCAGGAAGCTTCTGATAAAT+AGG 0.293202 3.1:-76786396 None:intergenic
TAGGCCGCCAGGTGGACTTC+TGG 0.299464 3.1:-76787922 None:intergenic
TTCCATATTTCAACATCTTC+AGG 0.299746 3.1:-76786414 None:intergenic
TTATCAGCAGCAAAATCTTC+AGG 0.304087 3.1:-76787250 None:intergenic
ATCAGCAAGGATCAAGTTAA+TGG 0.304469 3.1:+76786569 MS.gene054969:CDS
TTTGTTGCTCTAGCCTTGAT+TGG 0.306385 3.1:+76783699 MS.gene054969:CDS
AAGTTAAGGGGCATCAAAAT+TGG 0.309838 3.1:+76784707 MS.gene054969:CDS
GACTCTGCCTGACATTGCTT+GGG 0.309960 3.1:+76785666 MS.gene054969:intron
AGGCAGGTGGGAGGTTCTTC+AGG 0.312570 3.1:-76784506 None:intergenic
TGAGCTTCATGTTCATCCTT+TGG 0.318842 3.1:-76785784 None:intergenic
TTATCCCATGCCTTGACAAC+TGG 0.320818 3.1:+76784426 MS.gene054969:CDS
TTTGAAAGATTTGAATATTT+GGG 0.321547 3.1:+76787483 MS.gene054969:CDS
CACTAAGCTTGCTGAAGTTA+AGG 0.329223 3.1:+76784693 MS.gene054969:CDS
AATCCGAAGACATGGCTTTA+GGG 0.343883 3.1:+76783613 None:intergenic
TTCCTGAAGATGTTGAAATA+TGG 0.348064 3.1:+76786412 MS.gene054969:CDS
CCTTCCCATTATTTATGAAC+GGG 0.357509 3.1:+76787540 MS.gene054969:CDS
TGGGAACTTGACAACCAATA+TGG 0.368562 3.1:-76787202 None:intergenic
ATGGATATGAACTCAATCTA+TGG 0.377899 3.1:+76787349 MS.gene054969:CDS
AGTTCCCAAGTTGGAGTCTA+TGG 0.386840 3.1:+76787217 MS.gene054969:CDS
TTGTTGCTCTAGCCTTGATT+GGG 0.386986 3.1:+76783700 MS.gene054969:CDS
ATAGAGCGCTTATATCCTTC+AGG 0.387610 3.1:-76784539 None:intergenic
AGACTCTGCCTGACATTGCT+TGG 0.390574 3.1:+76785665 MS.gene054969:intron
CCGCGTTCACTTGAACTAAC+TGG 0.395097 3.1:-76787136 None:intergenic
TCAAAATTGGGTGAAAGTTA+CGG 0.401724 3.1:+76784720 MS.gene054969:CDS
CCTCCAAGACTGGGTACAAT+TGG 0.405008 3.1:+76784372 MS.gene054969:CDS
ACAAAGAGGCTTCCCTTCCC+TGG 0.407202 3.1:+76785859 MS.gene054969:CDS
CAAAATTGGGTGAAAGTTAC+GGG 0.407429 3.1:+76784721 MS.gene054969:CDS
GAAGTGCCCCATGCTTGAAT+TGG 0.410323 3.1:-76784774 None:intergenic
CTCCGTCTCCTTAGGCCGCC+AGG 0.412774 3.1:-76787933 None:intergenic
ATTCAAGAGTCCTCCAAGAC+TGG 0.418254 3.1:+76784362 MS.gene054969:CDS
CAAGTCTTATCTAAACGGAT+TGG 0.419452 3.1:+76787297 MS.gene054969:CDS
CCTGCTATATCTGCTGTAAT+GGG 0.421591 3.1:+76785835 MS.gene054969:CDS
TCCTGCTATATCTGCTGTAA+TGG 0.421692 3.1:+76785834 MS.gene054969:CDS
CATTAACAAAATCAATATGC+TGG 0.424608 3.1:+76786534 MS.gene054969:CDS
GGTACATTGGTCAGCCTGGC+TGG 0.424736 3.1:-76787181 None:intergenic
GGCTGACCAATGTACCATAT+TGG 0.427892 3.1:+76787188 MS.gene054969:CDS
AGACCCCGTTCATAAATAAT+GGG 0.428891 3.1:-76787544 None:intergenic
CAGATGCAATCTAGCTTCTC+TGG 0.430244 3.1:+76787748 MS.gene054969:intron
ACTAAGCTTGCTGAAGTTAA+GGG 0.433369 3.1:+76784694 MS.gene054969:CDS
TTGACAACTGGAAAGCGATT+AGG 0.436526 3.1:+76784438 MS.gene054969:CDS
TTTCCAATTGTACCCAGTCT+TGG 0.437033 3.1:-76784375 None:intergenic
TCATAACAATCATTGGATAG+TGG 0.441820 3.1:-76786617 None:intergenic
TCGTTGCTCATAACAATCAT+TGG 0.446283 3.1:-76786624 None:intergenic
CTGAGGTTGATCGGATTCTC+AGG 0.448079 3.1:+76787774 MS.gene054969:CDS
GGCCAGAAAAGTGGCCAGCC+AGG 0.448570 3.1:+76787167 MS.gene054969:CDS
GTGTCCAAGTCTTATCTAAA+CGG 0.458820 3.1:+76787292 MS.gene054969:CDS
TCAAGGCATGGGATAAAGTC+GGG 0.458938 3.1:-76784419 None:intergenic
CAATCCGTTTAGATAAGACT+TGG 0.459235 3.1:-76787296 None:intergenic
GAAGGAATACCATGCTGCAT+TGG 0.460905 3.1:-76786687 None:intergenic
CTCTGGTAGCTGAGGTTGAT+CGG 0.463097 3.1:+76787765 MS.gene054969:CDS
TTCTGTAGTTCCCGTGCAAA+AGG 0.463204 3.1:+76783743 MS.gene054969:CDS
TTGAGTGTCTCCGTCTCCTT+AGG 0.465804 3.1:-76787941 None:intergenic
AAGGAATACCATGCTGCATT+GGG 0.465896 3.1:-76786686 None:intergenic
AGGTTCAATTTGCTCTTGAG+AGG 0.466968 3.1:+76785806 MS.gene054969:CDS
AAGTCTTATCTAAACGGATT+GGG 0.468240 3.1:+76787298 MS.gene054969:CDS
CGTTTGCCCCAAGCAATGTC+AGG 0.469178 3.1:-76785673 None:intergenic
CCAATTGTACCCAGTCTTGG+AGG 0.469573 3.1:-76784372 None:intergenic
AAAGAGAAAGCCTCCGAAGC+TGG 0.471336 3.1:-76785731 None:intergenic
CGTGCAAAAGGTCGTGCCTC+GGG 0.471678 3.1:+76783755 MS.gene054969:CDS
ACAGACTGAGGTGAGGGAAC+AGG 0.474299 3.1:+76783800 MS.gene054969:CDS
CGGACAATAAGCTTTCCTTC+AGG 0.478801 3.1:-76787797 None:intergenic
GGATGTGGAGTTGCCAGCTT+CGG 0.480928 3.1:+76785718 MS.gene054969:CDS
AGTTAAGGGGCATCAAAATT+GGG 0.484810 3.1:+76784708 MS.gene054969:CDS
GGAAAGCGATTAGGAGTCTT+CGG 0.484828 3.1:+76784447 MS.gene054969:CDS
CCGTGCAAAAGGTCGTGCCT+CGG 0.487700 3.1:+76783754 MS.gene054969:CDS
CCCTTCCCATTATTTATGAA+CGG 0.488962 3.1:+76787539 MS.gene054969:CDS
CTGAAGGAAAGCTTATTGTC+CGG 0.497261 3.1:+76787798 MS.gene054969:CDS
TAACAAACCCTCCTTATCCT+TGG 0.499118 3.1:-76787894 None:intergenic
AGAGTTCCATGGCACATTGA+AGG 0.500328 3.1:+76785916 MS.gene054969:CDS
ATCAAATACTCTCCCAGGGA+AGG 0.510333 3.1:-76785872 None:intergenic
CATGACCTACTCCAAGGATA+AGG 0.511195 3.1:+76787883 MS.gene054969:CDS
GAAGTCCACCTGGCGGCCTA+AGG 0.514851 3.1:+76787925 MS.gene054969:CDS
AAGTGCCCCATGCTTGAATT+GGG 0.517462 3.1:-76784773 None:intergenic
TTGAATTGGGTTCCACCACC+AGG 0.519299 3.1:-76784760 None:intergenic
AGCAGAGTCAAAGAATGAAA+AGG 0.519819 3.1:+76784337 MS.gene054969:CDS
GCTTTCCAGTTGTCAAGGCA+TGG 0.520419 3.1:-76784431 None:intergenic
AAAGGATGAACATGAAGCTC+AGG 0.523572 3.1:+76785786 MS.gene054969:CDS
TGCAATGTCACTTGCACCAA+AGG 0.524307 3.1:+76785768 MS.gene054969:CDS
TATCAGCAGCAAAATCTTCA+GGG 0.525199 3.1:-76787249 None:intergenic
ATGGAGGAGATCATACGTCC+TGG 0.525368 3.1:-76787611 None:intergenic
TTCAATTTGCTCTTGAGAGG+GGG 0.525841 3.1:+76785809 MS.gene054969:CDS
CACCTGGCGGCCTAAGGAGA+CGG 0.529728 3.1:+76787931 MS.gene054969:CDS
GTGGAACCCAATTCAAGCAT+GGG 0.531941 3.1:+76784767 MS.gene054969:CDS
GGTTCAATTTGCTCTTGAGA+GGG 0.532634 3.1:+76785807 MS.gene054969:CDS
TGCCTTGTCTCTCTTCCTGA+AGG 0.535020 3.1:+76784524 MS.gene054969:CDS
AAGGATCAAGTTAATGGAGT+TGG 0.537672 3.1:+76786575 MS.gene054969:CDS
GCAGCAAAATCTTCAGGGGC+CGG 0.538266 3.1:-76787244 None:intergenic
CAAAGAGGCTTCCCTTCCCT+GGG 0.538740 3.1:+76785860 MS.gene054969:CDS
CATCATCCAAACCCCAATCA+AGG 0.540492 3.1:-76783712 None:intergenic
ACTGCATCAAATACTCTCCC+AGG 0.541601 3.1:-76785877 None:intergenic
CATTAACGAGCTTGAGAGCA+TGG 0.545161 3.1:+76787835 MS.gene054969:CDS
ATATGGTACATTGGTCAGCC+TGG 0.547368 3.1:-76787185 None:intergenic
TGAAGGAAAGCTTATTGTCC+GGG 0.549044 3.1:+76787799 MS.gene054969:CDS
TGGGATAAAGTCGGGGCCAG+CGG 0.549843 3.1:-76784411 None:intergenic
TTACATTGACTTTATACAAG+AGG 0.550306 3.1:+76784798 MS.gene054969:CDS
GGGAAATATTCTAGAGTAGA+CGG 0.551732 3.1:+76783633 MS.gene054969:CDS
ATTAACAAAATCAATATGCT+GGG 0.551786 3.1:+76786535 MS.gene054969:CDS
GAGATCATACGTCCTGGGAT+AGG 0.553125 3.1:-76787605 None:intergenic
TGGTTGTCAAGTTCCCAAGT+TGG 0.553335 3.1:+76787208 MS.gene054969:CDS
CTTTCCAGTTGTCAAGGCAT+GGG 0.554013 3.1:-76784430 None:intergenic
GGTCACAGTGGCCAGAAAAG+TGG 0.554071 3.1:+76787158 MS.gene054969:CDS
AAAGTTTGTAATGTTACCGC+TGG 0.554252 3.1:+76784395 MS.gene054969:CDS
TGTGGAGTTGCCAGCTTCGG+AGG 0.557116 3.1:+76785721 MS.gene054969:CDS
CCCATTACAGCAGATATAGC+AGG 0.558260 3.1:-76785835 None:intergenic
GAATTCAGTGGTCAAATGTA+CGG 0.565252 3.1:+76787320 MS.gene054969:CDS
CCCGTTCATAAATAATGGGA+AGG 0.566248 3.1:-76787540 None:intergenic
GTCAAGGCATGGGATAAAGT+CGG 0.567476 3.1:-76784420 None:intergenic
GATCGGATTCTCAGGCCTGA+AGG 0.569364 3.1:+76787782 MS.gene054969:CDS
CTGAACAGAGTATTGCGGCC+TGG 0.570629 3.1:+76786348 MS.gene054969:CDS
AGTTGGAGTCTATGGTAAGC+CGG 0.573432 3.1:+76787225 MS.gene054969:CDS
GGTGGAACCCAATTCAAGCA+TGG 0.579009 3.1:+76784766 MS.gene054969:CDS
TCTAGCTTCTCTGGTAGCTG+AGG 0.579746 3.1:+76787757 MS.gene054969:CDS
TAATCGCTTTCCAGTTGTCA+AGG 0.579902 3.1:-76784436 None:intergenic
CATGCGAACCTCCCACTGCA+TGG 0.581028 3.1:-76787864 None:intergenic
TCAAATACTCTCCCAGGGAA+GGG 0.581519 3.1:-76785871 None:intergenic
AGGAAGAGAGACAAGGCAGG+TGG 0.585497 3.1:-76784519 None:intergenic
TGAATACCTTCAATGTGCCA+TGG 0.585774 3.1:-76785922 None:intergenic
TATTGTCCGGGACACTGTTG+AGG 0.586039 3.1:+76787811 MS.gene054969:CDS
CTTCCCATTATTTATGAACG+GGG 0.587916 3.1:+76787541 MS.gene054969:CDS
CTTACCATAGACTCCAACTT+GGG 0.588345 3.1:-76787221 None:intergenic
TGACAACCAATATGGTACAT+TGG 0.589602 3.1:-76787194 None:intergenic
GTTATACTAGATGTTGGATG+TGG 0.591044 3.1:+76785703 MS.gene054969:CDS
GACCTACTCCAAGGATAAGG+AGG 0.591238 3.1:+76787886 MS.gene054969:CDS
TTCAAGAGTCCTCCAAGACT+GGG 0.592523 3.1:+76784363 MS.gene054969:CDS
GATATGAACTCAATCTATGG+AGG 0.592603 3.1:+76787352 MS.gene054969:CDS
TGGAGGAGATCATACGTCCT+GGG 0.597705 3.1:-76787610 None:intergenic
TTGCTGCTGATAATAAACAC+TGG 0.598168 3.1:+76787260 MS.gene054969:CDS
GTCAAATGTACGGAATGTCA+TGG 0.602207 3.1:+76787330 MS.gene054969:CDS
GTGCACGTTGTAGAGTTCCA+TGG 0.602530 3.1:+76785905 MS.gene054969:CDS
CTAAGCTTGCTGAAGTTAAG+GGG 0.603146 3.1:+76784695 MS.gene054969:CDS
GGAAGAGAGACAAGGCAGGT+GGG 0.603261 3.1:-76784518 None:intergenic
TAATGACCTCAACAGTGTCC+CGG 0.603316 3.1:-76787817 None:intergenic
GCTTACCATAGACTCCAACT+TGG 0.604957 3.1:-76787222 None:intergenic
GAAGGAACAGACTGAGGTGA+GGG 0.605363 3.1:+76783794 MS.gene054969:CDS
GATATAAGCGCTCTATTGAG+TGG 0.606444 3.1:+76784546 MS.gene054969:CDS
GTTCAATTTGCTCTTGAGAG+GGG 0.608000 3.1:+76785808 MS.gene054969:CDS
TTCAGGAAGAGAGACAAGGC+AGG 0.609303 3.1:-76784522 None:intergenic
GGAACTTGTTTCAATCAGCA+AGG 0.612001 3.1:+76786556 MS.gene054969:CDS
TGGAGCTGAACAGAGTATTG+CGG 0.613676 3.1:+76786343 MS.gene054969:CDS
AATCATTTAGCACCTATCCC+AGG 0.615139 3.1:+76787593 MS.gene054969:CDS
CCAGTTAGTTCAAGTGAACG+CGG 0.619426 3.1:+76787136 MS.gene054969:CDS
TGAAGGAACAGACTGAGGTG+AGG 0.620122 3.1:+76783793 MS.gene054969:CDS
TGTTGCTCTAGCCTTGATTG+GGG 0.623280 3.1:+76783701 MS.gene054969:CDS
GTGGCCTAAAAGCAGAGAGA+AGG 0.623669 3.1:+76784565 MS.gene054969:CDS
ACACGTGTTATACTAGATGT+TGG 0.623731 3.1:+76785697 MS.gene054969:CDS
CATGGTAAAGTCCATGCAGT+GGG 0.624917 3.1:+76787853 MS.gene054969:CDS
GAACTCTACAACGTGCACAA+TGG 0.628195 3.1:-76785900 None:intergenic
TTGAAAAGAGATGATCTGCA+TGG 0.628694 3.1:-76787630 None:intergenic
ACTTCAGCAAGCTTAGTGTG+TGG 0.630986 3.1:-76784688 None:intergenic
CTGCTGTAATGGGCACAAAG+AGG 0.637182 3.1:+76785845 MS.gene054969:CDS
CTGCATCAAATACTCTCCCA+GGG 0.637623 3.1:-76785876 None:intergenic
ACTCTGCCTGACATTGCTTG+GGG 0.639154 3.1:+76785667 MS.gene054969:CDS
GAAGATGTTGAAATATGGAA+TGG 0.639298 3.1:+76786417 MS.gene054969:CDS
CCGTTCATAAATAATGGGAA+GGG 0.642519 3.1:-76787539 None:intergenic
CTGATGATCCCAATGCAGCA+TGG 0.648087 3.1:+76786678 MS.gene054969:CDS
ATATGAACTCAATCTATGGA+GGG 0.649955 3.1:+76787353 MS.gene054969:CDS
GGTTCGCATGACCTACTCCA+AGG 0.652153 3.1:+76787877 MS.gene054969:CDS
CAAGTGAACGCGGGTCACAG+TGG 0.652261 3.1:+76787146 MS.gene054969:CDS
ACCTACTCCAAGGATAAGGA+GGG 0.652538 3.1:+76787887 MS.gene054969:CDS
AGAGAGACAAGGCAGGTGGG+AGG 0.652823 3.1:-76784515 None:intergenic
TATGTGTCCAGAAGTCCACC+TGG 0.655480 3.1:+76787915 MS.gene054969:CDS
AACAGAGTATTGCGGCCTGG+TGG 0.656543 3.1:+76786351 MS.gene054969:CDS
GGTAAAGTCCATGCAGTGGG+AGG 0.657793 3.1:+76787856 MS.gene054969:CDS
GCATGGTAAAGTCCATGCAG+TGG 0.661920 3.1:+76787852 MS.gene054969:CDS
TAAACGGATTGGGAATTCAG+TGG 0.664896 3.1:+76787308 MS.gene054969:CDS
ACCCTCCTTATCCTTGGAGT+AGG 0.669418 3.1:-76787888 None:intergenic
CGTCTCCTTAGGCCGCCAGG+TGG 0.669645 3.1:-76787930 None:intergenic
CAAGGCATGGGATAAAGTCG+GGG 0.669765 3.1:-76784418 None:intergenic
CAGTTAGTTCAAGTGAACGC+GGG 0.672917 3.1:+76787137 MS.gene054969:CDS
ATCAGCAGCAAAATCTTCAG+GGG 0.674815 3.1:-76787248 None:intergenic
ATCCTTCAGGAAGAGAGACA+AGG 0.675474 3.1:-76784526 None:intergenic
AATAATGGGAAGGGTATCTG+CGG 0.678257 3.1:-76787530 None:intergenic
TGGAACCCAATTCAAGCATG+GGG 0.686380 3.1:+76784768 MS.gene054969:CDS
TGAGGTGAAGGAACAGACTG+AGG 0.690937 3.1:+76783788 MS.gene054969:CDS
AAAAGAGATGATCTGCATGG+AGG 0.700577 3.1:-76787627 None:intergenic
GTGTCCAGAAGTCCACCTGG+CGG 0.714703 3.1:+76787918 MS.gene054969:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTCTTTTTCTTAAAA+GGG - chr3.1:76784970-76784989 None:intergenic 10.0%
!!! CAAAATATAAATTTCTATTT+TGG - chr3.1:76786805-76786824 None:intergenic 10.0%
!! AACAAGTATAAAAATAAAAC+AGG + chr3.1:76786947-76786966 MS.gene054969:intron 15.0%
!! ACAAGTATAAAAATAAAACA+GGG + chr3.1:76786948-76786967 MS.gene054969:intron 15.0%
!! TGGAATGAAAAAAAATATTA+TGG + chr3.1:76785027-76785046 MS.gene054969:intron 15.0%
!! TTTGAAAGATTTGAATATTT+GGG + chr3.1:76787483-76787502 MS.gene054969:CDS 15.0%
!!! CAATATTAACAGATTTTTAA+AGG - chr3.1:76785009-76785028 None:intergenic 15.0%
!!! CTTTAAAAATCTGTTAATAT+TGG + chr3.1:76785007-76785026 MS.gene054969:intron 15.0%
!!! GAGAAATAACATATAATTTT+AGG - chr3.1:76784644-76784663 None:intergenic 15.0%
!!! GATTTTTTCTTTTTCTTAAA+AGG - chr3.1:76784971-76784990 None:intergenic 15.0%
!!! TTTTTGTTTACATGTAAATA+AGG - chr3.1:76786292-76786311 None:intergenic 15.0%
!! ATTAACAAAATCAATATGCT+GGG + chr3.1:76786535-76786554 MS.gene054969:CDS 20.0%
!! TACATTAAAATGCACAAAAA+AGG - chr3.1:76786469-76786488 None:intergenic 20.0%
!! TATCATAATAAAGAGAAACT+TGG - chr3.1:76785127-76785146 None:intergenic 20.0%
!!! ACAAGTTAAACAGAAATTTT+TGG - chr3.1:76784882-76784901 None:intergenic 20.0%
!!! ATCAATATCATGGTAAATTT+TGG - chr3.1:76785479-76785498 None:intergenic 20.0%
!!! ATTTTGAATCGTATTCATTT+AGG + chr3.1:76785992-76786011 MS.gene054969:intron 20.0%
!!! CATTTTGTTTGGATTAAATT+TGG + chr3.1:76784825-76784844 MS.gene054969:intron 20.0%
!!! CTTTGAAAGATTTGAATATT+TGG + chr3.1:76787482-76787501 MS.gene054969:CDS 20.0%
!!! TTTTTGGTATATATCATGAT+TGG + chr3.1:76787566-76787585 MS.gene054969:CDS 20.0%
!!! TTTTTTGTGCATTTTAATGT+AGG + chr3.1:76786468-76786487 MS.gene054969:intron 20.0%
! AACCATAATAAAAAGTTTGC+TGG - chr3.1:76787702-76787721 None:intergenic 25.0%
! AATCATGTTAACTAGGATAT+TGG - chr3.1:76786255-76786274 None:intergenic 25.0%
! ATAATACATGTAAATGTCAC+TGG + chr3.1:76786063-76786082 MS.gene054969:intron 25.0%
! ATCTAGTAATCATGTTAACT+AGG - chr3.1:76786262-76786281 None:intergenic 25.0%
! ATGAAGGTAAATCAATATCA+TGG - chr3.1:76785489-76785508 None:intergenic 25.0%
! CATTAACAAAATCAATATGC+TGG + chr3.1:76786534-76786553 MS.gene054969:CDS 25.0%
! TGTAGAAGATCATTTAATGA+AGG - chr3.1:76785505-76785524 None:intergenic 25.0%
! TTTCTCTTTATTATGATACC+TGG + chr3.1:76785129-76785148 MS.gene054969:intron 25.0%
!! AACCAGCAAACTTTTTATTA+TGG + chr3.1:76787697-76787716 MS.gene054969:intron 25.0%
!! ATAAAACAGGGCTTTTTATT+TGG + chr3.1:76786960-76786979 MS.gene054969:intron 25.0%
!!! GTCTTTGTTATTTTCTGTAT+TGG - chr3.1:76784009-76784028 None:intergenic 25.0%
!!! TGTTTGTTATACAGCTATTT+TGG + chr3.1:76786090-76786109 MS.gene054969:intron 25.0%
!!! TTACATTGACTTTATACAAG+AGG + chr3.1:76784798-76784817 MS.gene054969:CDS 25.0%
AAACTGATAATAGCAATGCT+CGG + chr3.1:76783829-76783848 MS.gene054969:intron 30.0%
AAAGTCATTGAAGAACTTTC+AGG - chr3.1:76785327-76785346 None:intergenic 30.0%
AACAACAGATAGTAATGTAG+AGG + chr3.1:76784148-76784167 MS.gene054969:intron 30.0%
ATATGAACTCAATCTATGGA+GGG + chr3.1:76787353-76787372 MS.gene054969:CDS 30.0%
ATGGATATGAACTCAATCTA+TGG + chr3.1:76787349-76787368 MS.gene054969:CDS 30.0%
ATGTGCAGTTCATATGTATT+AGG - chr3.1:76785435-76785454 None:intergenic 30.0%
CAAAAACAATTTACAACTGC+AGG + chr3.1:76786306-76786325 MS.gene054969:intron 30.0%
CGTATCTTAATTTCCTCTAT+TGG - chr3.1:76785362-76785381 None:intergenic 30.0%
GAAGATGTTGAAATATGGAA+TGG + chr3.1:76786417-76786436 MS.gene054969:CDS 30.0%
GACTAATTCAGCAATTAACT+CGG - chr3.1:76786828-76786847 None:intergenic 30.0%
GGCATTTATCAATCTTAACT+TGG + chr3.1:76786013-76786032 MS.gene054969:intron 30.0%
TAGAGGAAATTAAGATACGT+TGG + chr3.1:76785363-76785382 MS.gene054969:intron 30.0%
TCAAAATTGGGTGAAAGTTA+CGG + chr3.1:76784720-76784739 MS.gene054969:CDS 30.0%
TCATAACAATCATTGGATAG+TGG - chr3.1:76786620-76786639 None:intergenic 30.0%
TGAAAAGAAAGATGAATCAG+AGG + chr3.1:76784070-76784089 MS.gene054969:intron 30.0%
TTCCATATTTCAACATCTTC+AGG - chr3.1:76786417-76786436 None:intergenic 30.0%
TTCCTGAAGATGTTGAAATA+TGG + chr3.1:76786412-76786431 MS.gene054969:CDS 30.0%
TTTACAATGTTTACTCGATG+TGG + chr3.1:76785600-76785619 MS.gene054969:intron 30.0%
! AAGTCTTATCTAAACGGATT+GGG + chr3.1:76787298-76787317 MS.gene054969:CDS 30.0%
! TCAATTGTCATTTCATTCTC+TGG + chr3.1:76784604-76784623 MS.gene054969:intron 30.0%
! TCTTTTCAAAGGTTCAGAAA+AGG + chr3.1:76787644-76787663 MS.gene054969:CDS 30.0%
! TTTTGCTAATGCTTATTTGG+TGG + chr3.1:76787720-76787739 MS.gene054969:intron 30.0%
!! AAGTTTGCTGGTTATTAATG+TGG - chr3.1:76787690-76787709 None:intergenic 30.0%
!! AGTTTGCTGGTTATTAATGT+GGG - chr3.1:76787689-76787708 None:intergenic 30.0%
!! CAGATTTTTAAAGGCTATAC+TGG - chr3.1:76785000-76785019 None:intergenic 30.0%
!! TGGTTTTGCTAATGCTTATT+TGG + chr3.1:76787717-76787736 MS.gene054969:intron 30.0%
!! TTGTTATACAGCTATTTTGG+TGG + chr3.1:76786093-76786112 MS.gene054969:intron 30.0%
!!! TGTTATACAGCTATTTTGGT+GGG + chr3.1:76786094-76786113 MS.gene054969:intron 30.0%
AAACAATTTACAACTGCAGG+TGG + chr3.1:76786309-76786328 MS.gene054969:intron 35.0%
AAAGAATCTGATGAAAACGC+TGG + chr3.1:76784194-76784213 MS.gene054969:intron 35.0%
AAAGTTTGTAATGTTACCGC+TGG + chr3.1:76784395-76784414 MS.gene054969:CDS 35.0%
AAATAACAAAGACAGCGAAG+AGG + chr3.1:76784016-76784035 MS.gene054969:intron 35.0%
AAGACCCCGTTCATAAATAA+TGG - chr3.1:76787548-76787567 None:intergenic 35.0%
AAGGATCAAGTTAATGGAGT+TGG + chr3.1:76786575-76786594 MS.gene054969:CDS 35.0%
AATGAAACTACGACACAAAC+TGG + chr3.1:76784296-76784315 MS.gene054969:intron 35.0%
ACAAACAATTTCTTCACTCC+AGG - chr3.1:76785150-76785169 None:intergenic 35.0%
ACACGTGTTATACTAGATGT+TGG + chr3.1:76785697-76785716 MS.gene054969:CDS 35.0%
ACTTCTTCTGATAAAGAAGC+TGG - chr3.1:76785530-76785549 None:intergenic 35.0%
AGAAAACACCATGTCAGTTA+AGG - chr3.1:76786712-76786731 None:intergenic 35.0%
AGACCCCGTTCATAAATAAT+GGG - chr3.1:76787547-76787566 None:intergenic 35.0%
AGATAGTAATGTAGAGGAGA+AGG + chr3.1:76784154-76784173 MS.gene054969:intron 35.0%
AGCAGAGTCAAAGAATGAAA+AGG + chr3.1:76784337-76784356 MS.gene054969:CDS 35.0%
ATCAGCAAGGATCAAGTTAA+TGG + chr3.1:76786569-76786588 MS.gene054969:CDS 35.0%
ATCTTGTTGATCTAAGCTTG+TGG + chr3.1:76785075-76785094 MS.gene054969:intron 35.0%
CAAAATTGGGTGAAAGTTAC+GGG + chr3.1:76784721-76784740 MS.gene054969:CDS 35.0%
CAATCCGTTTAGATAAGACT+TGG - chr3.1:76787299-76787318 None:intergenic 35.0%
CATTGTAATACCATATCTGC+AGG - chr3.1:76784666-76784685 None:intergenic 35.0%
CCCTTCCCATTATTTATGAA+CGG + chr3.1:76787539-76787558 MS.gene054969:CDS 35.0%
CCTTCCCATTATTTATGAAC+GGG + chr3.1:76787540-76787559 MS.gene054969:CDS 35.0%
CTTCCCATTATTTATGAACG+GGG + chr3.1:76787541-76787560 MS.gene054969:CDS 35.0%
GAATTCAGTGGTCAAATGTA+CGG + chr3.1:76787320-76787339 MS.gene054969:CDS 35.0%
GATATGAACTCAATCTATGG+AGG + chr3.1:76787352-76787371 MS.gene054969:CDS 35.0%
GGTAAGAAAACAGAAGATGA+AGG + chr3.1:76783981-76784000 MS.gene054969:intron 35.0%
GTTATACTAGATGTTGGATG+TGG + chr3.1:76785703-76785722 MS.gene054969:CDS 35.0%
TAATTTCCTCTATTGGCAGT+TGG - chr3.1:76785355-76785374 None:intergenic 35.0%
TATCAGCAGCAAAATCTTCA+GGG - chr3.1:76787252-76787271 None:intergenic 35.0%
TATTCCTTCCTTAACTGACA+TGG + chr3.1:76786701-76786720 MS.gene054969:intron 35.0%
TCAGGAAGCTTCTGATAAAT+AGG - chr3.1:76786399-76786418 None:intergenic 35.0%
TCGTTGCTCATAACAATCAT+TGG - chr3.1:76786627-76786646 None:intergenic 35.0%
TCTTGTTGATCTAAGCTTGT+GGG + chr3.1:76785076-76785095 MS.gene054969:intron 35.0%
TGACAACCAATATGGTACAT+TGG - chr3.1:76787197-76787216 None:intergenic 35.0%
TGCATCATCAAAGCTCTATT+AGG - chr3.1:76785646-76785665 None:intergenic 35.0%
TGCTGTGTAATTCAAACACA+TGG - chr3.1:76786194-76786213 None:intergenic 35.0%
TGTGACAACTTGACAAGTTA+GGG - chr3.1:76784947-76784966 None:intergenic 35.0%
TTATCAGCAGCAAAATCTTC+AGG - chr3.1:76787253-76787272 None:intergenic 35.0%
TTGAAAAGAGATGATCTGCA+TGG - chr3.1:76787633-76787652 None:intergenic 35.0%
TTGCTGCTGATAATAAACAC+TGG + chr3.1:76787260-76787279 MS.gene054969:CDS 35.0%
! ATTTATGAACGGGGTCTTTT+TGG + chr3.1:76787550-76787569 MS.gene054969:CDS 35.0%
! CAAGTCTTATCTAAACGGAT+TGG + chr3.1:76787297-76787316 MS.gene054969:CDS 35.0%
! CCGTTCATAAATAATGGGAA+GGG - chr3.1:76787542-76787561 None:intergenic 35.0%
! GTGTCCAAGTCTTATCTAAA+CGG + chr3.1:76787292-76787311 MS.gene054969:CDS 35.0%
! TCATCAGATTTTTGACACAG+TGG - chr3.1:76786665-76786684 None:intergenic 35.0%
! TGCAGATCATCTCTTTTCAA+AGG + chr3.1:76787633-76787652 MS.gene054969:CDS 35.0%
!! AAGTTAAGGGGCATCAAAAT+TGG + chr3.1:76784707-76784726 MS.gene054969:CDS 35.0%
!! ACTAAGCTTGCTGAAGTTAA+GGG + chr3.1:76784694-76784713 MS.gene054969:CDS 35.0%
!! AGTTAAGGGGCATCAAAATT+GGG + chr3.1:76784708-76784727 MS.gene054969:CDS 35.0%
!! CAAGAGGTATGCATTTTGTT+TGG + chr3.1:76784814-76784833 MS.gene054969:intron 35.0%
!! GGGAAATATTCTAGAGTAGA+CGG + chr3.1:76783633-76783652 MS.gene054969:CDS 35.0%
!! TGTTATTTCTCCTGCAGATA+TGG + chr3.1:76784653-76784672 MS.gene054969:intron 35.0%
!! TTAACCTTCTCTCTGCTTTT+AGG - chr3.1:76784572-76784591 None:intergenic 35.0%
!! TTTTAAAGGCTATACTGGTG+CGG - chr3.1:76784995-76785014 None:intergenic 35.0%
!!! GTTATACAGCTATTTTGGTG+GGG + chr3.1:76786095-76786114 MS.gene054969:intron 35.0%
AAAAGAGATGATCTGCATGG+AGG - chr3.1:76787630-76787649 None:intergenic 40.0%
AAAGGATGAACATGAAGCTC+AGG + chr3.1:76785786-76785805 MS.gene054969:CDS 40.0%
AACACCATGTCAGTTAAGGA+AGG - chr3.1:76786708-76786727 None:intergenic 40.0%
AAGGAATACCATGCTGCATT+GGG - chr3.1:76786689-76786708 None:intergenic 40.0%
AATCATTTAGCACCTATCCC+AGG + chr3.1:76787593-76787612 MS.gene054969:CDS 40.0%
AGTCTAATCTCTGATGTGAC+AGG + chr3.1:76787080-76787099 MS.gene054969:intron 40.0%
ATATGAACTGCACATCTGTG+AGG + chr3.1:76785440-76785459 MS.gene054969:intron 40.0%
ATCAGCAGCAAAATCTTCAG+GGG - chr3.1:76787251-76787270 None:intergenic 40.0%
CAAAGACCAGAGTTCAAATG+AGG + chr3.1:76784241-76784260 MS.gene054969:intron 40.0%
CAATCGGTAGATGTCAAACA+CGG - chr3.1:76787441-76787460 None:intergenic 40.0%
CCTGCTATATCTGCTGTAAT+GGG + chr3.1:76785835-76785854 MS.gene054969:CDS 40.0%
CTGAAGGAAAGCTTATTGTC+CGG + chr3.1:76787798-76787817 MS.gene054969:CDS 40.0%
CTTACCATAGACTCCAACTT+GGG - chr3.1:76787224-76787243 None:intergenic 40.0%
GACCATACAAAAAAACCACC+AGG - chr3.1:76786369-76786388 None:intergenic 40.0%
GATATAAGCGCTCTATTGAG+TGG + chr3.1:76784546-76784565 MS.gene054969:CDS 40.0%
GGAATACCTCATTTGAACTC+TGG - chr3.1:76784250-76784269 None:intergenic 40.0%
GGAGAGTAAAAATGAGGTGA+AGG + chr3.1:76783776-76783795 MS.gene054969:CDS 40.0%
GTCAAATGTACGGAATGTCA+TGG + chr3.1:76787330-76787349 MS.gene054969:CDS 40.0%
GTGTGACAACTTGACAAGTT+AGG - chr3.1:76784948-76784967 None:intergenic 40.0%
TAACAAACCCTCCTTATCCT+TGG - chr3.1:76787897-76787916 None:intergenic 40.0%
TAATCGCTTTCCAGTTGTCA+AGG - chr3.1:76784439-76784458 None:intergenic 40.0%
TAGTAATGTAGAGGAGAAGG+TGG + chr3.1:76784157-76784176 MS.gene054969:intron 40.0%
TCCTGCTATATCTGCTGTAA+TGG + chr3.1:76785834-76785853 MS.gene054969:CDS 40.0%
TGAAGGAAAGCTTATTGTCC+GGG + chr3.1:76787799-76787818 MS.gene054969:CDS 40.0%
TGAATACCTTCAATGTGCCA+TGG - chr3.1:76785925-76785944 None:intergenic 40.0%
TGAGCTTCATGTTCATCCTT+TGG - chr3.1:76785787-76785806 None:intergenic 40.0%
TGGGAACTTGACAACCAATA+TGG - chr3.1:76787205-76787224 None:intergenic 40.0%
TTGACAACTGGAAAGCGATT+AGG + chr3.1:76784438-76784457 MS.gene054969:CDS 40.0%
TTTCAAAGCTGCAGCAAATC+TGG - chr3.1:76787470-76787489 None:intergenic 40.0%
TTTCCAATTGTACCCAGTCT+TGG - chr3.1:76784378-76784397 None:intergenic 40.0%
TTTGTCCTGTTGTGCGTAAA+CGG - chr3.1:76785411-76785430 None:intergenic 40.0%
! AACTGGATCGTTTTCTACAC+AGG + chr3.1:76784313-76784332 MS.gene054969:intron 40.0%
! AAGCCTTATCCTACTAAGTG+GGG + chr3.1:76786750-76786769 MS.gene054969:intron 40.0%
! AGGTTCAATTTGCTCTTGAG+AGG + chr3.1:76785806-76785825 MS.gene054969:CDS 40.0%
! ATAGAGCGCTTATATCCTTC+AGG - chr3.1:76784542-76784561 None:intergenic 40.0%
! ATTTTCCTCCGACTTCTCTT+CGG - chr3.1:76783919-76783938 None:intergenic 40.0%
! CAAGCCTTATCCTACTAAGT+GGG + chr3.1:76786749-76786768 MS.gene054969:intron 40.0%
! CCCGTTCATAAATAATGGGA+AGG - chr3.1:76787543-76787562 None:intergenic 40.0%
! CTCATTTGAACTCTGGTCTT+TGG - chr3.1:76784243-76784262 None:intergenic 40.0%
! GGAACTTGTTTCAATCAGCA+AGG + chr3.1:76786556-76786575 MS.gene054969:CDS 40.0%
! GGATAGTGGCTTCTTGTATA+TGG - chr3.1:76786606-76786625 None:intergenic 40.0%
! GGTTCAATTTGCTCTTGAGA+GGG + chr3.1:76785807-76785826 MS.gene054969:CDS 40.0%
! GTTCAATTTGCTCTTGAGAG+GGG + chr3.1:76785808-76785827 MS.gene054969:CDS 40.0%
! TCAAATGAGGTATTCCCTTC+CGG + chr3.1:76784254-76784273 MS.gene054969:intron 40.0%
! TCAGATTTTTGACACAGTGG+AGG - chr3.1:76786662-76786681 None:intergenic 40.0%
! TGCAGGTGGTAAACTTCTTT+TGG + chr3.1:76786323-76786342 MS.gene054969:intron 40.0%
! TGTTTGACATCTACCGATTG+TGG + chr3.1:76787441-76787460 MS.gene054969:intron 40.0%
! TTCAATTTGCTCTTGAGAGG+GGG + chr3.1:76785809-76785828 MS.gene054969:CDS 40.0%
!! AACAGGGCTTTTTATTTGGC+TGG + chr3.1:76786964-76786983 MS.gene054969:intron 40.0%
!! AATAATGGGAAGGGTATCTG+CGG - chr3.1:76787533-76787552 None:intergenic 40.0%
!! CACTAAGCTTGCTGAAGTTA+AGG + chr3.1:76784693-76784712 MS.gene054969:CDS 40.0%
!! CTAAGCTTGCTGAAGTTAAG+GGG + chr3.1:76784695-76784714 MS.gene054969:CDS 40.0%
!! GAGTATCTTACTTTTCCTGG+TGG + chr3.1:76784745-76784764 MS.gene054969:CDS 40.0%
!! GGTGAGTATCTTACTTTTCC+TGG + chr3.1:76784742-76784761 MS.gene054969:CDS 40.0%
!! TAAACGGATTGGGAATTCAG+TGG + chr3.1:76787308-76787327 MS.gene054969:CDS 40.0%
!! TATCTTACTTTTCCTGGTGG+TGG + chr3.1:76784748-76784767 MS.gene054969:CDS 40.0%
!! TCACTTTTCCAAGACAGGAA+GGG - chr3.1:76786912-76786931 None:intergenic 40.0%
!! TTGTTGCTCTAGCCTTGATT+GGG + chr3.1:76783700-76783719 MS.gene054969:CDS 40.0%
!! TTTGTTGCTCTAGCCTTGAT+TGG + chr3.1:76783699-76783718 MS.gene054969:CDS 40.0%
AAGTGCCCCATGCTTGAATT+GGG - chr3.1:76784776-76784795 None:intergenic 45.0%
ACAGTTTAGACCGAACTGGT+AGG + chr3.1:76785211-76785230 MS.gene054969:intron 45.0%
ACCTACTCCAAGGATAAGGA+GGG + chr3.1:76787887-76787906 MS.gene054969:CDS 45.0%
ACTGCATCAAATACTCTCCC+AGG - chr3.1:76785880-76785899 None:intergenic 45.0%
ACTTCAGCAAGCTTAGTGTG+TGG - chr3.1:76784691-76784710 None:intergenic 45.0%
AGAGTTCCATGGCACATTGA+AGG + chr3.1:76785916-76785935 MS.gene054969:CDS 45.0%
AGATACGAAGACAGAAGACG+AGG + chr3.1:76783959-76783978 MS.gene054969:intron 45.0%
AGTTGGAGTCTATGGTAAGC+CGG + chr3.1:76787225-76787244 MS.gene054969:CDS 45.0%
ATATGGTACATTGGTCAGCC+TGG - chr3.1:76787188-76787207 None:intergenic 45.0%
ATCAAATACTCTCCCAGGGA+AGG - chr3.1:76785875-76785894 None:intergenic 45.0%
ATCCTTCAGGAAGAGAGACA+AGG - chr3.1:76784529-76784548 None:intergenic 45.0%
ATCTTCAGAAGACTTCTCCG+TGG - chr3.1:76783943-76783962 None:intergenic 45.0%
ATTCAAGAGTCCTCCAAGAC+TGG + chr3.1:76784362-76784381 MS.gene054969:CDS 45.0%
CAGTTAGTTCAAGTGAACGC+GGG + chr3.1:76787137-76787156 MS.gene054969:CDS 45.0%
CATCATCCAAACCCCAATCA+AGG - chr3.1:76783715-76783734 None:intergenic 45.0%
CATGACCTACTCCAAGGATA+AGG + chr3.1:76787883-76787902 MS.gene054969:CDS 45.0%
CATGGTAAAGTCCATGCAGT+GGG + chr3.1:76787853-76787872 MS.gene054969:CDS 45.0%
CATTAACGAGCTTGAGAGCA+TGG + chr3.1:76787835-76787854 MS.gene054969:CDS 45.0%
CCACTTAGTAGGATAAGGCT+TGG - chr3.1:76786751-76786770 None:intergenic 45.0%
CCAGTTAGTTCAAGTGAACG+CGG + chr3.1:76787136-76787155 MS.gene054969:CDS 45.0%
CCCATTACAGCAGATATAGC+AGG - chr3.1:76785838-76785857 None:intergenic 45.0%
CGGACAATAAGCTTTCCTTC+AGG - chr3.1:76787800-76787819 None:intergenic 45.0%
CGGCAGTTTGAAGATAATCC+TGG + chr3.1:76783849-76783868 MS.gene054969:intron 45.0%
CTGCATCAAATACTCTCCCA+GGG - chr3.1:76785879-76785898 None:intergenic 45.0%
CTTATCCTACTAAGTGGGGT+CGG + chr3.1:76786754-76786773 MS.gene054969:intron 45.0%
CTTCCTGTCTTGGAAAAGTG+AGG + chr3.1:76786911-76786930 MS.gene054969:intron 45.0%
CTTTCCAGTTGTCAAGGCAT+GGG - chr3.1:76784433-76784452 None:intergenic 45.0%
GAACTCTACAACGTGCACAA+TGG - chr3.1:76785903-76785922 None:intergenic 45.0%
GAAGGAATACCATGCTGCAT+TGG - chr3.1:76786690-76786709 None:intergenic 45.0%
GAAGTCGGAGGAAAATTCCA+CGG + chr3.1:76783923-76783942 MS.gene054969:intron 45.0%
GATACGAAGACAGAAGACGA+GGG + chr3.1:76783960-76783979 MS.gene054969:intron 45.0%
GCAAATCTGGAAGCCACAAT+CGG - chr3.1:76787457-76787476 None:intergenic 45.0%
GCTTACCATAGACTCCAACT+TGG - chr3.1:76787225-76787244 None:intergenic 45.0%
GGAAAGCGATTAGGAGTCTT+CGG + chr3.1:76784447-76784466 MS.gene054969:CDS 45.0%
GGCTGACCAATGTACCATAT+TGG + chr3.1:76787188-76787207 MS.gene054969:CDS 45.0%
GTCAAGGCATGGGATAAAGT+CGG - chr3.1:76784423-76784442 None:intergenic 45.0%
GTGGAACCCAATTCAAGCAT+GGG + chr3.1:76784767-76784786 MS.gene054969:CDS 45.0%
TAATGACCTCAACAGTGTCC+CGG - chr3.1:76787820-76787839 None:intergenic 45.0%
TACCAGTTCGGTCTAAACTG+TGG - chr3.1:76785212-76785231 None:intergenic 45.0%
TCAAATACTCTCCCAGGGAA+GGG - chr3.1:76785874-76785893 None:intergenic 45.0%
TCAAGGCATGGGATAAAGTC+GGG - chr3.1:76784422-76784441 None:intergenic 45.0%
TCTGTACCAACTGCCAATAG+AGG + chr3.1:76785346-76785365 MS.gene054969:intron 45.0%
TGGAACCCAATTCAAGCATG+GGG + chr3.1:76784768-76784787 MS.gene054969:CDS 45.0%
TGGTTGTCAAGTTCCCAAGT+TGG + chr3.1:76787208-76787227 MS.gene054969:CDS 45.0%
TTAGACCGAACTGGTAGGAA+TGG + chr3.1:76785216-76785235 MS.gene054969:intron 45.0%
TTATCCCATGCCTTGACAAC+TGG + chr3.1:76784426-76784445 MS.gene054969:CDS 45.0%
TTCAAGAGTCCTCCAAGACT+GGG + chr3.1:76784363-76784382 MS.gene054969:CDS 45.0%
TTCTGTAGTTCCCGTGCAAA+AGG + chr3.1:76783743-76783762 MS.gene054969:CDS 45.0%
TTGTCCTGTTGTGCGTAAAC+GGG - chr3.1:76785410-76785429 None:intergenic 45.0%
! AAATGAGGTATTCCCTTCCG+GGG + chr3.1:76784256-76784275 MS.gene054969:intron 45.0%
! ACTTTTCCAAGACAGGAAGG+GGG - chr3.1:76786910-76786929 None:intergenic 45.0%
! AGTTCCCAAGTTGGAGTCTA+TGG + chr3.1:76787217-76787236 MS.gene054969:CDS 45.0%
! ATGTGCCATTCCTACCAGTT+CGG - chr3.1:76785224-76785243 None:intergenic 45.0%
! CAAATGAGGTATTCCCTTCC+GGG + chr3.1:76784255-76784274 MS.gene054969:intron 45.0%
! CACTTTTCCAAGACAGGAAG+GGG - chr3.1:76786911-76786930 None:intergenic 45.0%
! CAGATGCAATCTAGCTTCTC+TGG + chr3.1:76787748-76787767 MS.gene054969:intron 45.0%
! CCAAGCCTTATCCTACTAAG+TGG + chr3.1:76786748-76786767 MS.gene054969:intron 45.0%
! TAATCCTGGTGATTTGCCTG+AGG + chr3.1:76783863-76783882 MS.gene054969:intron 45.0%
! TGCAATGTCACTTGCACCAA+AGG + chr3.1:76785768-76785787 MS.gene054969:CDS 45.0%
!! ACCTCATTTTTACTCTCCCG+AGG - chr3.1:76783774-76783793 None:intergenic 45.0%
!! CTCACTTTTCCAAGACAGGA+AGG - chr3.1:76786913-76786932 None:intergenic 45.0%
!! GTTCCTCACTTTTCCAAGAC+AGG - chr3.1:76786917-76786936 None:intergenic 45.0%
!! TGGAGCTGAACAGAGTATTG+CGG + chr3.1:76786343-76786362 MS.gene054969:CDS 45.0%
!! TGTTGCTCTAGCCTTGATTG+GGG + chr3.1:76783701-76783720 MS.gene054969:CDS 45.0%
!!! ATACAGCTATTTTGGTGGGG+TGG + chr3.1:76786098-76786117 MS.gene054969:intron 45.0%
!!! GGCCTGGTGGTTTTTTTGTA+TGG + chr3.1:76786364-76786383 MS.gene054969:CDS 45.0%
!!! TACAGCTATTTTGGTGGGGT+GGG + chr3.1:76786099-76786118 MS.gene054969:intron 45.0%
AAAGAGAAAGCCTCCGAAGC+TGG - chr3.1:76785734-76785753 None:intergenic 50.0%
ACCCTCCTTATCCTTGGAGT+AGG - chr3.1:76787891-76787910 None:intergenic 50.0%
ACTCTGCCTGACATTGCTTG+GGG + chr3.1:76785667-76785686 MS.gene054969:CDS 50.0%
AGACTCTGCCTGACATTGCT+TGG + chr3.1:76785665-76785684 MS.gene054969:intron 50.0%
CAAGGCATGGGATAAAGTCG+GGG - chr3.1:76784421-76784440 None:intergenic 50.0%
CCAATTGTACCCAGTCTTGG+AGG - chr3.1:76784375-76784394 None:intergenic 50.0%
CCGCGTTCACTTGAACTAAC+TGG - chr3.1:76787139-76787158 None:intergenic 50.0%
CCTCCAAGACTGGGTACAAT+TGG + chr3.1:76784372-76784391 MS.gene054969:CDS 50.0%
CGACCCCACTTAGTAGGATA+AGG - chr3.1:76786756-76786775 None:intergenic 50.0%
CGGTAGATGTCAAACACGGA+AGG - chr3.1:76787437-76787456 None:intergenic 50.0%
CTGATGATCCCAATGCAGCA+TGG + chr3.1:76786678-76786697 MS.gene054969:CDS 50.0%
GAAGGAACAGACTGAGGTGA+GGG + chr3.1:76783794-76783813 MS.gene054969:CDS 50.0%
GACCTACTCCAAGGATAAGG+AGG + chr3.1:76787886-76787905 MS.gene054969:CDS 50.0%
GACTCTGCCTGACATTGCTT+GGG + chr3.1:76785666-76785685 MS.gene054969:intron 50.0%
GCATGGTAAAGTCCATGCAG+TGG + chr3.1:76787852-76787871 MS.gene054969:CDS 50.0%
GCCTCGGGAGAGTAAAAATG+AGG + chr3.1:76783770-76783789 MS.gene054969:CDS 50.0%
GCTTTCCAGTTGTCAAGGCA+TGG - chr3.1:76784434-76784453 None:intergenic 50.0%
GGTGGAACCCAATTCAAGCA+TGG + chr3.1:76784766-76784785 MS.gene054969:CDS 50.0%
GTGCACGTTGTAGAGTTCCA+TGG + chr3.1:76785905-76785924 MS.gene054969:CDS 50.0%
GTGGCCTAAAAGCAGAGAGA+AGG + chr3.1:76784565-76784584 MS.gene054969:CDS 50.0%
TATGTGTCCAGAAGTCCACC+TGG + chr3.1:76787915-76787934 MS.gene054969:CDS 50.0%
TATTGTCCGGGACACTGTTG+AGG + chr3.1:76787811-76787830 MS.gene054969:CDS 50.0%
TGAAGGAACAGACTGAGGTG+AGG + chr3.1:76783793-76783812 MS.gene054969:CDS 50.0%
TGAGGTGAAGGAACAGACTG+AGG + chr3.1:76783788-76783807 MS.gene054969:CDS 50.0%
TGCCACAGTTTAGACCGAAC+TGG + chr3.1:76785207-76785226 MS.gene054969:intron 50.0%
TGCCTTGTCTCTCTTCCTGA+AGG + chr3.1:76784524-76784543 MS.gene054969:CDS 50.0%
TGTCAGCTCCGAAGAGAAGT+CGG + chr3.1:76783908-76783927 MS.gene054969:intron 50.0%
TGTCCTGTTGTGCGTAAACG+GGG - chr3.1:76785409-76785428 None:intergenic 50.0%
TTCAGGAAGAGAGACAAGGC+AGG - chr3.1:76784525-76784544 None:intergenic 50.0%
TTCTTACCCCCTTCCTGTCT+TGG + chr3.1:76786901-76786920 MS.gene054969:intron 50.0%
TTGAATTGGGTTCCACCACC+AGG - chr3.1:76784763-76784782 None:intergenic 50.0%
TTGAGTGTCTCCGTCTCCTT+AGG - chr3.1:76787944-76787963 None:intergenic 50.0%
! CTCTGGTAGCTGAGGTTGAT+CGG + chr3.1:76787765-76787784 MS.gene054969:CDS 50.0%
! CTGAGGTTGATCGGATTCTC+AGG + chr3.1:76787774-76787793 MS.gene054969:CDS 50.0%
! GAAGTGCCCCATGCTTGAAT+TGG - chr3.1:76784777-76784796 None:intergenic 50.0%
! TCTAGCTTCTCTGGTAGCTG+AGG + chr3.1:76787757-76787776 MS.gene054969:CDS 50.0%
! TTTTGGTGGGGTGGGTATGT+TGG + chr3.1:76786107-76786126 MS.gene054969:intron 50.0%
!! CTCTAGCCTTGATTGGGGTT+TGG + chr3.1:76783706-76783725 MS.gene054969:CDS 50.0%
!! CTGCTGTAATGGGCACAAAG+AGG + chr3.1:76785845-76785864 MS.gene054969:CDS 50.0%
ACAAAGAGGCTTCCCTTCCC+TGG + chr3.1:76785859-76785878 MS.gene054969:CDS 55.0%
ACAGACTGAGGTGAGGGAAC+AGG + chr3.1:76783800-76783819 MS.gene054969:CDS 55.0%
ACTAAGTGGGGTCGGCTATG+TGG + chr3.1:76786762-76786781 MS.gene054969:intron 55.0%
ACTGCACATCTGTGAGGCAC+TGG + chr3.1:76785446-76785465 MS.gene054969:intron 55.0%
AGGAAGAGAGACAAGGCAGG+TGG - chr3.1:76784522-76784541 None:intergenic 55.0%
CAAAGAGGCTTCCCTTCCCT+GGG + chr3.1:76785860-76785879 MS.gene054969:CDS 55.0%
CATAGCCGACCCCACTTAGT+AGG - chr3.1:76786762-76786781 None:intergenic 55.0%
CGTTTGCCCCAAGCAATGTC+AGG - chr3.1:76785676-76785695 None:intergenic 55.0%
GATCGGATTCTCAGGCCTGA+AGG + chr3.1:76787782-76787801 MS.gene054969:CDS 55.0%
GCAGCAAAATCTTCAGGGGC+CGG - chr3.1:76787247-76787266 None:intergenic 55.0%
GCATCCTCAGGCAAATCACC+AGG - chr3.1:76783870-76783889 None:intergenic 55.0%
GCTGACATTGCTATCCCCCT+TGG - chr3.1:76783895-76783914 None:intergenic 55.0%
GCTTGTGGGAAGCAGCTCAT+AGG + chr3.1:76785090-76785109 MS.gene054969:intron 55.0%
GGAAGAGAGACAAGGCAGGT+GGG - chr3.1:76784521-76784540 None:intergenic 55.0%
GGATGTGGAGTTGCCAGCTT+CGG + chr3.1:76785718-76785737 MS.gene054969:CDS 55.0%
GGTAAAGTCCATGCAGTGGG+AGG + chr3.1:76787856-76787875 MS.gene054969:CDS 55.0%
GGTCACAGTGGCCAGAAAAG+TGG + chr3.1:76787158-76787177 MS.gene054969:CDS 55.0%
GGTTCGCATGACCTACTCCA+AGG + chr3.1:76787877-76787896 MS.gene054969:CDS 55.0%
TAGAAGCTCAGACTGAGCCC+CGG - chr3.1:76784276-76784295 None:intergenic 55.0%
TTGCCTGAGGATGCGACCAA+GGG + chr3.1:76783876-76783895 MS.gene054969:intron 55.0%
TTGTGCGTAAACGGGGAGGA+GGG - chr3.1:76785402-76785421 None:intergenic 55.0%
TTTGCCTGAGGATGCGACCA+AGG + chr3.1:76783875-76783894 MS.gene054969:intron 55.0%
!! AACAGAGTATTGCGGCCTGG+TGG + chr3.1:76786351-76786370 MS.gene054969:CDS 55.0%
!! CAGCGAAGAGGCGTCTACTA+AGG + chr3.1:76784028-76784047 MS.gene054969:intron 55.0%
!! CTGAACAGAGTATTGCGGCC+TGG + chr3.1:76786348-76786367 MS.gene054969:CDS 55.0%
AGAGAGACAAGGCAGGTGGG+AGG - chr3.1:76784518-76784537 None:intergenic 60.0%
AGGCAGGTGGGAGGTTCTTC+AGG - chr3.1:76784509-76784528 None:intergenic 60.0%
CAAGTGAACGCGGGTCACAG+TGG + chr3.1:76787146-76787165 MS.gene054969:CDS 60.0%
CAGCTCCGAAGAGAAGTCGG+AGG + chr3.1:76783911-76783930 MS.gene054969:intron 60.0%
CATGCGAACCTCCCACTGCA+TGG - chr3.1:76787867-76787886 None:intergenic 60.0%
CCGTGCAAAAGGTCGTGCCT+CGG + chr3.1:76783754-76783773 MS.gene054969:CDS 60.0%
CCTCCCCGTTTACGCACAAC+AGG + chr3.1:76785403-76785422 MS.gene054969:intron 60.0%
CCTGTTGTGCGTAAACGGGG+AGG - chr3.1:76785406-76785425 None:intergenic 60.0%
CGTGCAAAAGGTCGTGCCTC+GGG + chr3.1:76783755-76783774 MS.gene054969:CDS 60.0%
GGTACATTGGTCAGCCTGGC+TGG - chr3.1:76787184-76787203 None:intergenic 60.0%
GTGTCCAGAAGTCCACCTGG+CGG + chr3.1:76787918-76787937 MS.gene054969:CDS 60.0%
GTTGTGCGTAAACGGGGAGG+AGG - chr3.1:76785403-76785422 None:intergenic 60.0%
TGCCTGAGGATGCGACCAAG+GGG + chr3.1:76783877-76783896 MS.gene054969:intron 60.0%
TGGGATAAAGTCGGGGCCAG+CGG - chr3.1:76784414-76784433 None:intergenic 60.0%
TGTGCGTAAACGGGGAGGAG+GGG - chr3.1:76785401-76785420 None:intergenic 60.0%
TGTGGAGTTGCCAGCTTCGG+AGG + chr3.1:76785721-76785740 MS.gene054969:CDS 60.0%
! CCGAGGCACGACCTTTTGCA+CGG - chr3.1:76783757-76783776 None:intergenic 60.0%
! CGAGGCACGACCTTTTGCAC+GGG - chr3.1:76783756-76783775 None:intergenic 60.0%
!!! AGCCTGGCTGGCCACTTTTC+TGG - chr3.1:76787172-76787191 None:intergenic 60.0%
AGCTCAGACTGAGCCCCGGA+AGG - chr3.1:76784272-76784291 None:intergenic 65.0%
CACCTGGCGGCCTAAGGAGA+CGG + chr3.1:76787931-76787950 MS.gene054969:CDS 65.0%
GAAGTCCACCTGGCGGCCTA+AGG + chr3.1:76787925-76787944 MS.gene054969:CDS 65.0%
GCCTGAGGATGCGACCAAGG+GGG + chr3.1:76783878-76783897 MS.gene054969:intron 65.0%
GCTCAGACTGAGCCCCGGAA+GGG - chr3.1:76784271-76784290 None:intergenic 65.0%
GGCCAGAAAAGTGGCCAGCC+AGG + chr3.1:76787167-76787186 MS.gene054969:CDS 65.0%
GTGCGTAAACGGGGAGGAGG+GGG - chr3.1:76785400-76785419 None:intergenic 65.0%
TCCCCCTTGGTCGCATCCTC+AGG - chr3.1:76783882-76783901 None:intergenic 65.0%
TGCGTAAACGGGGAGGAGGG+GGG - chr3.1:76785399-76785418 None:intergenic 65.0%
! TAGGCCGCCAGGTGGACTTC+TGG - chr3.1:76787925-76787944 None:intergenic 65.0%
CGTCTCCTTAGGCCGCCAGG+TGG - chr3.1:76787933-76787952 None:intergenic 70.0%
CTCCGTCTCCTTAGGCCGCC+AGG - chr3.1:76787936-76787955 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 76783624 76787963 76783624 ID=MS.gene054969
chr3.1 mRNA 76783624 76787963 76783624 ID=MS.gene054969.t1;Parent=MS.gene054969
chr3.1 exon 76783624 76783821 76783624 ID=MS.gene054969.t1.exon1;Parent=MS.gene054969.t1
chr3.1 CDS 76783624 76783821 76783624 ID=cds.MS.gene054969.t1;Parent=MS.gene054969.t1
chr3.1 exon 76784335 76784586 76784335 ID=MS.gene054969.t1.exon2;Parent=MS.gene054969.t1
chr3.1 CDS 76784335 76784586 76784335 ID=cds.MS.gene054969.t1;Parent=MS.gene054969.t1
chr3.1 exon 76784670 76784819 76784670 ID=MS.gene054969.t1.exon3;Parent=MS.gene054969.t1
chr3.1 CDS 76784670 76784819 76784670 ID=cds.MS.gene054969.t1;Parent=MS.gene054969.t1
chr3.1 exon 76785667 76785937 76785667 ID=MS.gene054969.t1.exon4;Parent=MS.gene054969.t1
chr3.1 CDS 76785667 76785937 76785667 ID=cds.MS.gene054969.t1;Parent=MS.gene054969.t1
chr3.1 exon 76786328 76786438 76786328 ID=MS.gene054969.t1.exon5;Parent=MS.gene054969.t1
chr3.1 CDS 76786328 76786438 76786328 ID=cds.MS.gene054969.t1;Parent=MS.gene054969.t1
chr3.1 exon 76786525 76786699 76786525 ID=MS.gene054969.t1.exon6;Parent=MS.gene054969.t1
chr3.1 CDS 76786525 76786699 76786525 ID=cds.MS.gene054969.t1;Parent=MS.gene054969.t1
chr3.1 exon 76787102 76787374 76787102 ID=MS.gene054969.t1.exon7;Parent=MS.gene054969.t1
chr3.1 CDS 76787102 76787374 76787102 ID=cds.MS.gene054969.t1;Parent=MS.gene054969.t1
chr3.1 exon 76787471 76787665 76787471 ID=MS.gene054969.t1.exon8;Parent=MS.gene054969.t1
chr3.1 CDS 76787471 76787665 76787471 ID=cds.MS.gene054969.t1;Parent=MS.gene054969.t1
chr3.1 exon 76787751 76787963 76787751 ID=MS.gene054969.t1.exon9;Parent=MS.gene054969.t1
chr3.1 CDS 76787751 76787963 76787751 ID=cds.MS.gene054969.t1;Parent=MS.gene054969.t1
Gene Sequence

>MS.gene054969

ATGGCTTTAGGGAAATATTCTAGAGTAGACGGTAGAAGATCGTCGAGTTACTGTTCAACAGTGACTATAGTTGTGTTTGTTGCTCTAGCCTTGATTGGGGTTTGGATGATGACATCATCTTCTGTAGTTCCCGTGCAAAAGGTCGTGCCTCGGGAGAGTAAAAATGAGGTGAAGGAACAGACTGAGGTGAGGGAACAGGTGAGTGAAACTGATAATAGCAATGCTCGGCAGTTTGAAGATAATCCTGGTGATTTGCCTGAGGATGCGACCAAGGGGGATAGCAATGTCAGCTCCGAAGAGAAGTCGGAGGAAAATTCCACGGAGAAGTCTTCTGAAGATACGAAGACAGAAGACGAGGGTAAGAAAACAGAAGATGAAGGCTCCAATACAGAAAATAACAAAGACAGCGAAGAGGCGTCTACTAAGGAATCTGAATCTGATGAGAGTGAAAAGAAAGATGAATCAGAGGAGAACAACAAGTCTGATTCAGATGAAAGTGAAAAGAAATCTAGTGACTCGAATGAAACAACAGATAGTAATGTAGAGGAGAAGGTGGAACAAAGCGAGAACAAAGAATCTGATGAAAACGCTGGTGAGAAGAATACAGATGATAATGCCAAAGACCAGAGTTCAAATGAGGTATTCCCTTCCGGGGCTCAGTCTGAGCTTCTAAATGAAACTACGACACAAACTGGATCGTTTTCTACACAGGCAGCAGAGTCAAAGAATGAAAAGGAGATTCAAGAGTCCTCCAAGACTGGGTACAATTGGAAAGTTTGTAATGTTACCGCTGGCCCCGACTTTATCCCATGCCTTGACAACTGGAAAGCGATTAGGAGTCTTCGGAGCACTAAACACTATGAACATCGAGAAAGACACTGTCCTGAAGAACCTCCCACCTGCCTTGTCTCTCTTCCTGAAGGATATAAGCGCTCTATTGAGTGGCCTAAAAGCAGAGAGAAGGTTAAAATCAAATCTTGTCAATTGTCATTTCATTCTCTGGTTGTTTTTCTTTTTCCTAAAATTATATGTTATTTCTCCTGCAGATATGGTATTACAATGTTCCACACACTAAGCTTGCTGAAGTTAAGGGGCATCAAAATTGGGTGAAAGTTACGGGTGAGTATCTTACTTTTCCTGGTGGTGGAACCCAATTCAAGCATGGGGCACTTCATTACATTGACTTTATACAAGAGGTATGCATTTTGTTTGGATTAAATTTGGCATTTATTTGCTGCTTTTGTATTTAATTTTTCCAAAAATTTCTGTTTAACTTGTATATTATCTGAACTTTCAAGATCAATATATAATCAATGTAATCCCTAACTTGTCAAGTTGTCACACCCTTTTAAGAAAAAGAAAAAATCACCGCACCAGTATAGCCTTTAAAAATCTGTTAATATTGGAATGAAAAAAAATATTATGGCAATTCAACTCTATAGAGCGTAAAAATCTTGTTGATCTAAGCTTGTGGGAAGCAGCTCATAGGTAGCTTCTCGTCCAAGTTTCTCTTTATTATGATACCTGGAGTGAAGAAATTGTTTGTTGCTATCTCAACACAATTATGATTATTTTTCATGTTCTGCCACAGTTTAGACCGAACTGGTAGGAATGGCACATATGATCTGCATTGACTAATAAACAAATAGTAAATGAGATACAAAAATTGCAGTTCAACTATAGTATTGAATTTGAGTAGACCTGAAAGTTCTTCAATGACTTTCTGTACCAACTGCCAATAGAGGAAATTAAGATACGTTGGATGATAAAATCCCCCCTCCTCCCCGTTTACGCACAACAGGACAAATCCTAATACATATGAACTGCACATCTGTGAGGCACTGGATGACAACCAAAATTTACCATGATATTGATTTACCTTCATTAAATGATCTTCTACAAACCAGCTTCTTTATCAGAAGAAGTTATGTGAAATCTACATACTTTCATCTTAAACTTTTTTTAGATTTCTAGAATTTACAATGTTTACTCGATGTGGACGAGCAGTCAAGCATTTTACCTAATAGAGCTTTGATGATGCAGACTCTGCCTGACATTGCTTGGGGCAAACGCACACGTGTTATACTAGATGTTGGATGTGGAGTTGCCAGCTTCGGAGGCTTTCTCTTTGATAGAGATGTACTTGCAATGTCACTTGCACCAAAGGATGAACATGAAGCTCAGGTTCAATTTGCTCTTGAGAGGGGGATTCCTGCTATATCTGCTGTAATGGGCACAAAGAGGCTTCCCTTCCCTGGGAGAGTATTTGATGCAGTCCATTGTGCACGTTGTAGAGTTCCATGGCACATTGAAGGTATTCAGATTACACAGATTCTGTTTACATGATTAGATTAGTTTATTATATAGAATTTTGAATCGTATTCATTTAGGCATTTATCAATCTTAACTTGGTATATAAATTGTAGCGACAGACAACATATAATACATGTAAATGTCACTGGATTTTGTTTGTTATACAGCTATTTTGGTGGGGTGGGTATGTTGGATTATTTTACGTTATTCTTACTATCAAGATGAAGAGAAAAATGTGTGACGTTTGATGAAATCCATGTGTTTGAATTACACAGCAGAGACTCTACTATTTATATGCAATAATTATGAGAATCACCAATATCCTAGTTAACATGATTACTAGATTTGATTACCTTATTTACATGTAAACAAAAACAATTTACAACTGCAGGTGGTAAACTTCTTTTGGAGCTGAACAGAGTATTGCGGCCTGGTGGTTTTTTTGTATGGTCTGCGACTCCTATTTATCAGAAGCTTCCTGAAGATGTTGAAATATGGAATGGTAAATAATAATAACTAGTCATGTGTTCCTTTTTTGTGCATTTTAATGTAGGTTTTCAATCTTGACATTTATGAATTTGTTAACAGCGATGAAAGCATTAACAAAATCAATATGCTGGGAACTTGTTTCAATCAGCAAGGATCAAGTTAATGGAGTTGGTGTAGCCATATACAAGAAGCCACTATCCAATGATTGTTATGAGCAACGATCAAAGAATGAGCCTCCACTGTGTCAAAAATCTGATGATCCCAATGCAGCATGGTATTCCTTCCTTAACTGACATGGTGTTTTCTTAAGCAATAACAACAACCAAGCCTTATCCTACTAAGTGGGGTCGGCTATGTGGTTTTTTTAAAGCAAAAACCAAAATAGAAATTTATATTTTGCCGAGTTAATTGCTGAATTAGTCTTTGATTGCAGTCGCTTACACTGAGAAAACTTTAAAACAGAGCTGATAGTTGCTTCTTACCCCCTTCCTGTCTTGGAAAAGTGAGGAACATTTGTATAAAACAAGTATAAAAATAAAACAGGGCTTTTTATTTGGCTGGAGACTTAGATGTTTCTGCTGCAAATGAACAATTATTGTACTTCGAGATTTATCTGCGAAATTTTCAATTACACTAGTATTATAATGTTCATGCAGTCTAATCTCTGATGTGACAGGTATATTAAATTGCAAGCATGCATACACAAAGTGCCAGTTAGTTCAAGTGAACGCGGGTCACAGTGGCCAGAAAAGTGGCCAGCCAGGCTGACCAATGTACCATATTGGTTGTCAAGTTCCCAAGTTGGAGTCTATGGTAAGCCGGCCCCTGAAGATTTTGCTGCTGATAATAAACACTGGAAACGTGTAGTGTCCAAGTCTTATCTAAACGGATTGGGAATTCAGTGGTCAAATGTACGGAATGTCATGGATATGAACTCAATCTATGGAGGGTGAGCAAAAATCATTGTTTCAAATATTATTGTGAACTATTATATACTTACTAATATGTCCTTCCGTGTTTGACATCTACCGATTGTGGCTTCCAGATTTGCTGCAGCTTTGAAAGATTTGAATATTTGGGTCATGAATGTAGTTTCAATAGACTCCGCAGATACCCTTCCCATTATTTATGAACGGGGTCTTTTTGGTATATATCATGATTGGTGTGAATCATTTAGCACCTATCCCAGGACGTATGATCTCCTCCATGCAGATCATCTCTTTTCAAAGGTTCAGAAAAGGTGAAAATAATTATTTCATTCCCACATTAATAACCAGCAAACTTTTTATTATGGTTTTGCTAATGCTTATTTGGTGGTCACGCAGATGCAATCTAGCTTCTCTGGTAGCTGAGGTTGATCGGATTCTCAGGCCTGAAGGAAAGCTTATTGTCCGGGACACTGTTGAGGTCATTAACGAGCTTGAGAGCATGGTAAAGTCCATGCAGTGGGAGGTTCGCATGACCTACTCCAAGGATAAGGAGGGTTTGTTATGTGTCCAGAAGTCCACCTGGCGGCCTAAGGAGACGGAGACACTCAA
Protein sequence

>MS.gene054969.t1

MALGKYSRVDGRRSSSYCSTVTIVVFVALALIGVWMMTSSSVVPVQKVVPRESKNEVKEQTEVREQAAESKNEKEIQESSKTGYNWKVCNVTAGPDFIPCLDNWKAIRSLRSTKHYEHRERHCPEEPPTCLVSLPEGYKRSIEWPKSREKIWYYNVPHTKLAEVKGHQNWVKVTGEYLTFPGGGTQFKHGALHYIDFIQETLPDIAWGKRTRVILDVGCGVASFGGFLFDRDVLAMSLAPKDEHEAQVQFALERGIPAISAVMGTKRLPFPGRVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFVWSATPIYQKLPEDVEIWNAMKALTKSICWELVSISKDQVNGVGVAIYKKPLSNDCYEQRSKNEPPLCQKSDDPNAAWYIKLQACIHKVPVSSSERGSQWPEKWPARLTNVPYWLSSSQVGVYGKPAPEDFAADNKHWKRVVSKSYLNGLGIQWSNVRNVMDMNSIYGGFAAALKDLNIWVMNVVSIDSADTLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADHLFSKVQKRCNLASLVAEVDRILRPEGKLIVRDTVEVINELESMVKSMQWEVRMTYSKDKEGLLCVQKSTWRPKETETL