AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene06388

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06388.t1 MTR_3g096480 98.606 789 10 1 1 788 1 789 0.0 1607
MS.gene06388.t1 MTR_8g093880 73.082 821 184 8 1 787 1 818 0.0 1249
MS.gene06388.t1 MTR_3g088790 57.393 798 285 12 1 787 1 754 0.0 944
MS.gene06388.t1 MTR_5g021100 54.900 847 302 11 1 778 1 836 0.0 932
MS.gene06388.t1 MTR_8g076650 55.951 731 280 8 75 777 176 892 0.0 847
MS.gene06388.t1 MTR_5g083150 53.631 537 238 3 241 777 75 600 0.0 637
MS.gene06388.t1 MTR_3g071530 54.876 523 221 5 256 778 142 649 0.0 610
MS.gene06388.t1 MTR_1g022255 50.851 529 238 5 251 777 193 701 0.0 594
MS.gene06388.t1 MTR_1g029730 49.109 505 239 10 257 754 141 634 1.32e-169 504
MS.gene06388.t1 MTR_5g080720 45.389 553 276 10 220 758 79 619 3.14e-169 503
MS.gene06388.t1 MTR_3g068990 47.686 497 244 8 267 758 162 647 4.34e-168 501
MS.gene06388.t1 MTR_5g080720 45.898 512 251 10 220 717 79 578 3.77e-153 459
MS.gene06388.t1 MTR_1g442840 45.941 542 253 16 267 786 101 624 3.31e-151 456
MS.gene06388.t1 MTR_1g442840 47.002 517 240 13 288 786 11 511 9.77e-150 448
MS.gene06388.t1 MTR_1g069785 45.880 534 255 14 267 780 71 590 8.08e-149 449
MS.gene06388.t1 MTR_8g432620 42.830 523 266 12 267 775 97 600 7.86e-144 436
MS.gene06388.t1 MTR_1g075900 43.561 528 266 11 267 775 100 614 4.12e-142 432
MS.gene06388.t1 MTR_7g076150 40.917 545 286 12 247 776 65 588 5.67e-141 428
MS.gene06388.t1 MTR_8g100075 42.056 535 276 14 260 775 101 620 6.42e-138 422
MS.gene06388.t1 MTR_0019s0120 42.264 530 268 15 267 775 114 626 5.98e-137 419
MS.gene06388.t1 MTR_5g026930 42.509 534 268 14 267 780 81 595 2.42e-136 417
MS.gene06388.t1 MTR_8g071280 41.856 528 270 12 267 775 79 588 3.81e-136 416
MS.gene06388.t1 MTR_1g101370 41.519 566 291 18 233 775 69 617 1.41e-135 416
MS.gene06388.t1 MTR_7g006060 44.856 486 244 8 285 755 68 544 1.73e-135 414
MS.gene06388.t1 MTR_4g098890 45.113 532 257 15 247 763 76 587 1.77e-132 431
MS.gene06388.t1 MTR_8g055840 42.077 549 278 18 246 775 73 600 3.56e-132 406
MS.gene06388.t1 MTR_8g432680 40.631 539 280 16 267 781 114 636 2.65e-131 405
MS.gene06388.t1 MTR_1g022255 46.366 399 193 4 251 648 193 571 4.62e-131 402
MS.gene06388.t1 MTR_7g076170 40.426 564 292 19 243 781 87 631 2.20e-129 400
MS.gene06388.t1 MTR_5g040360 41.935 527 268 14 267 775 93 599 2.23e-128 396
MS.gene06388.t1 MTR_3g040370 41.121 535 272 15 267 782 94 604 6.26e-127 392
MS.gene06388.t1 MTR_7g076150 41.685 463 239 9 327 776 1 445 8.47e-124 379
MS.gene06388.t1 MTR_1g051055 39.700 534 272 14 267 775 95 603 1.15e-116 366
MS.gene06388.t1 MTR_5g026930 42.694 438 215 13 267 687 81 499 1.26e-104 331
MS.gene06388.t1 MTR_0019s0120 41.781 438 221 14 267 687 114 534 5.72e-104 330
MS.gene06388.t1 MTR_5g064080 33.275 571 310 18 246 776 132 671 1.82e-91 301
MS.gene06388.t1 MTR_3g074780 34.286 525 286 17 291 776 185 689 8.18e-86 287
MS.gene06388.t1 MTR_4g083030 34.023 532 295 19 267 769 95 599 1.73e-79 267
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06388.t1 AT5G64030 64.671 835 240 9 1 787 1 828 0.0 1106
MS.gene06388.t1 AT1G29470 64.512 789 260 9 1 788 1 770 0.0 1039
MS.gene06388.t1 AT1G29470 64.512 789 260 9 1 788 1 770 0.0 1039
MS.gene06388.t1 AT2G34300 61.181 796 275 9 1 788 1 770 0.0 1009
MS.gene06388.t1 AT2G34300 61.181 796 275 9 1 788 1 770 0.0 1009
MS.gene06388.t1 AT2G34300 61.181 796 275 9 1 788 1 770 0.0 1009
MS.gene06388.t1 AT3G51070 62.446 695 240 4 94 781 215 895 0.0 939
MS.gene06388.t1 AT3G51070 34.659 176 90 6 1 154 1 173 8.42e-17 85.5
MS.gene06388.t1 AT3G51070 63.158 627 210 4 94 713 215 827 0.0 856
MS.gene06388.t1 AT3G51070 34.659 176 90 6 1 154 1 173 9.43e-17 85.5
MS.gene06388.t1 AT2G40280 50.171 584 265 8 202 781 26 587 0.0 616
MS.gene06388.t1 AT3G56080 53.818 537 227 7 242 777 94 610 0.0 608
MS.gene06388.t1 AT1G19430 41.447 760 380 13 21 777 27 724 0.0 600
MS.gene06388.t1 AT1G19430 41.447 760 380 13 21 777 27 724 0.0 600
MS.gene06388.t1 AT3G56080 55.180 473 195 6 242 713 94 550 0.0 555
MS.gene06388.t1 AT1G77260 44.784 556 278 10 216 754 88 631 5.15e-171 508
MS.gene06388.t1 AT5G06050 45.796 559 266 15 223 758 99 643 1.11e-170 508
MS.gene06388.t1 AT2G39750 48.089 497 242 9 267 758 186 671 7.59e-169 504
MS.gene06388.t1 AT3G23300 44.195 534 263 13 267 780 88 606 3.01e-146 442
MS.gene06388.t1 AT3G23300 44.195 534 263 13 267 780 88 606 3.01e-146 442
MS.gene06388.t1 AT4G14360 45.527 503 245 12 267 755 85 572 3.39e-146 442
MS.gene06388.t1 AT4G14360 45.527 503 245 12 267 755 85 572 3.39e-146 442
MS.gene06388.t1 AT4G00740 41.954 522 270 10 269 776 92 594 3.03e-143 434
MS.gene06388.t1 AT4G00740 41.954 522 270 10 269 776 92 594 3.03e-143 434
MS.gene06388.t1 AT1G04430 45.365 507 240 14 267 755 93 580 8.21e-143 434
MS.gene06388.t1 AT1G04430 45.365 507 240 14 267 755 93 580 8.21e-143 434
MS.gene06388.t1 AT1G04430 45.365 507 240 14 267 755 93 580 8.21e-143 434
MS.gene06388.t1 AT1G31850 42.617 535 258 15 267 775 85 596 7.24e-141 429
MS.gene06388.t1 AT1G31850 42.617 535 258 15 267 775 85 596 7.24e-141 429
MS.gene06388.t1 AT1G31850 42.617 535 258 15 267 775 85 596 7.24e-141 429
MS.gene06388.t1 AT1G31850 42.617 535 258 15 267 775 85 596 7.24e-141 429
MS.gene06388.t1 AT4G10440 41.187 556 292 14 240 775 76 616 7.27e-141 429
MS.gene06388.t1 AT1G33170 41.547 556 291 13 240 775 93 634 2.86e-140 428
MS.gene06388.t1 AT4G19120 42.351 536 258 15 267 775 79 590 3.52e-138 421
MS.gene06388.t1 AT4G19120 42.351 536 258 15 267 775 79 590 3.52e-138 421
MS.gene06388.t1 AT5G14430 46.139 505 239 13 267 755 89 576 7.08e-137 419
MS.gene06388.t1 AT1G19430 36.926 631 334 12 21 649 27 595 1.17e-135 415
MS.gene06388.t1 AT1G26850 42.724 536 272 15 267 782 95 615 1.53e-135 415
MS.gene06388.t1 AT1G26850 42.724 536 272 15 267 782 95 615 1.53e-135 415
MS.gene06388.t1 AT5G14430 45.545 505 242 13 267 755 89 576 1.79e-134 412
MS.gene06388.t1 AT2G45750 41.882 542 262 19 270 787 99 611 4.00e-132 407
MS.gene06388.t1 AT4G00750 41.051 514 260 18 289 775 125 622 2.08e-126 392
MS.gene06388.t1 AT4G18030 41.590 541 274 15 256 775 84 603 3.95e-126 391
MS.gene06388.t1 AT2G43200 42.188 512 264 14 267 763 100 594 5.58e-126 390
MS.gene06388.t1 AT2G43200 42.188 512 264 14 267 763 100 594 5.58e-126 390
MS.gene06388.t1 AT5G04060 41.935 527 267 12 267 775 92 597 1.32e-125 389
MS.gene06388.t1 AT3G10200 41.176 527 273 14 267 775 81 588 1.65e-123 383
MS.gene06388.t1 AT3G10200 41.247 497 258 13 267 748 81 558 6.77e-117 366
MS.gene06388.t1 AT4G19120 42.247 445 209 14 267 687 79 499 1.59e-107 338
MS.gene06388.t1 AT1G26850 41.204 432 216 14 267 683 95 503 1.70e-92 299
MS.gene06388.t1 AT1G78240 31.579 570 322 19 246 772 132 676 1.77e-84 283
MS.gene06388.t1 AT1G78240 31.579 570 322 19 246 772 132 676 1.77e-84 283
MS.gene06388.t1 AT1G13860 33.948 542 289 19 267 772 90 598 1.26e-78 265
MS.gene06388.t1 AT1G13860 33.948 542 289 19 267 772 90 598 1.26e-78 265
MS.gene06388.t1 AT1G13860 33.948 542 289 19 267 772 90 598 1.26e-78 265
MS.gene06388.t1 AT1G13860 33.948 542 289 19 267 772 90 598 1.26e-78 265
MS.gene06388.t1 AT1G13860 36.779 416 218 14 383 772 46 442 6.25e-74 248
MS.gene06388.t1 AT2G03480 34.221 526 294 17 268 772 96 590 1.35e-73 251
MS.gene06388.t1 AT2G03480 33.647 532 300 17 268 772 96 601 5.47e-73 250
MS.gene06388.t1 AT2G03480 32.166 314 184 10 268 565 96 396 3.74e-33 133

Find 214 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGAAAGATTTGAATATT+TGG 0.164392 3.1:+76836891 MS.gene06388:CDS
TGCAGGTGGTAAACTTCTTT+TGG 0.230174 3.1:+76835735 MS.gene06388:intron
CAATCCGAAGACATGGCTTT+AGG 0.255854 3.1:+76833024 None:intergenic
CTCATTTGAACTCTGGTCTT+TGG 0.275650 3.1:-76833652 None:intergenic
GGATAGTGGCTTCTTGTATA+TGG 0.279107 3.1:-76836012 None:intergenic
AAGACCCCGTTCATAAATAA+TGG 0.282831 3.1:-76836954 None:intergenic
CTCTAGCCTTGATTGGGGTT+TGG 0.283882 3.1:+76833118 MS.gene06388:CDS
TCAGGAAGCTTCTGATAAAT+AGG 0.293202 3.1:-76835808 None:intergenic
TAGGCCGCCAGGTGGACTTC+TGG 0.299464 3.1:-76837331 None:intergenic
TTCCATATTTCAACATCTTC+AGG 0.299746 3.1:-76835826 None:intergenic
TTATCAGCAGCAAAATCTTC+AGG 0.304087 3.1:-76836659 None:intergenic
ATCAGCAAGGATCAAGTTAA+TGG 0.304469 3.1:+76835978 MS.gene06388:CDS
TTTGTTGCTCTAGCCTTGAT+TGG 0.306385 3.1:+76833111 MS.gene06388:CDS
AAGTTAAGGGGCATCAAAAT+TGG 0.309838 3.1:+76834119 MS.gene06388:CDS
GACTCTGCCTGACATTGCTT+GGG 0.309960 3.1:+76835078 MS.gene06388:intron
AGGCAGGTGGGAGGTTCTTC+AGG 0.312570 3.1:-76833918 None:intergenic
TGAGCTTCATGTTCATCCTT+TGG 0.318842 3.1:-76835196 None:intergenic
TTATCCCATGCCTTGACAAC+TGG 0.320818 3.1:+76833838 MS.gene06388:CDS
TTTGAAAGATTTGAATATTT+GGG 0.321547 3.1:+76836892 MS.gene06388:CDS
CACTAAGCTTGCTGAAGTTA+AGG 0.329223 3.1:+76834105 MS.gene06388:CDS
AATCCGAAGACATGGCTTTA+GGG 0.343883 3.1:+76833025 None:intergenic
TTCCTGAAGATGTTGAAATA+TGG 0.348064 3.1:+76835824 MS.gene06388:CDS
CCTTCCCATTATTTATGAAC+GGG 0.357509 3.1:+76836949 MS.gene06388:CDS
TCAAATGAGGTATTCCCTTC+CGG 0.367877 3.1:+76833666 MS.gene06388:CDS
TGGGAACTTGACAACCAATA+TGG 0.368562 3.1:-76836611 None:intergenic
CAAATGAGGTATTCCCTTCC+GGG 0.376544 3.1:+76833667 MS.gene06388:CDS
ATGGATATGAACTCAATCTA+TGG 0.377899 3.1:+76836758 MS.gene06388:CDS
AATGAAACTACGACACAAAC+TGG 0.384495 3.1:+76833708 MS.gene06388:CDS
AGTTCCCAAGTTGGAGTCTA+TGG 0.386840 3.1:+76836626 MS.gene06388:CDS
TTGTTGCTCTAGCCTTGATT+GGG 0.386986 3.1:+76833112 MS.gene06388:CDS
ATAGAGCGCTTATATCCTTC+AGG 0.387610 3.1:-76833951 None:intergenic
AGACTCTGCCTGACATTGCT+TGG 0.390574 3.1:+76835077 MS.gene06388:intron
CCGCGTTCACTTGAACTAAC+TGG 0.395097 3.1:-76836545 None:intergenic
TCAAAATTGGGTGAAAGTTA+CGG 0.401724 3.1:+76834132 MS.gene06388:CDS
CCTCCAAGACTGGGTACAAT+TGG 0.405008 3.1:+76833784 MS.gene06388:CDS
ACAAAGAGGCTTCCCTTCCC+TGG 0.407202 3.1:+76835271 MS.gene06388:CDS
CAAAATTGGGTGAAAGTTAC+GGG 0.407429 3.1:+76834133 MS.gene06388:CDS
GAAGTGCCCCATGCTTGAAT+TGG 0.410323 3.1:-76834186 None:intergenic
CTCCGTCTCCTTAGGCCGCC+AGG 0.412774 3.1:-76837342 None:intergenic
ATTCAAGAGTCCTCCAAGAC+TGG 0.418254 3.1:+76833774 MS.gene06388:CDS
CAAGTCTTATCTAAACGGAT+TGG 0.419452 3.1:+76836706 MS.gene06388:CDS
CCTGCTATATCTGCTGTAAT+GGG 0.421591 3.1:+76835247 MS.gene06388:CDS
TCCTGCTATATCTGCTGTAA+TGG 0.421692 3.1:+76835246 MS.gene06388:CDS
CATTAACAAAATCAATATGC+TGG 0.424608 3.1:+76835943 MS.gene06388:CDS
GGTACATTGGTCAGCCTGGC+TGG 0.424736 3.1:-76836590 None:intergenic
GGCTGACCAATGTACCATAT+TGG 0.427892 3.1:+76836597 MS.gene06388:CDS
AGACCCCGTTCATAAATAAT+GGG 0.428891 3.1:-76836953 None:intergenic
CAGATGCAATCTAGCTTCTC+TGG 0.430244 3.1:+76837157 MS.gene06388:intron
ACTAAGCTTGCTGAAGTTAA+GGG 0.433369 3.1:+76834106 MS.gene06388:CDS
TTGACAACTGGAAAGCGATT+AGG 0.436526 3.1:+76833850 MS.gene06388:CDS
TTTCCAATTGTACCCAGTCT+TGG 0.437033 3.1:-76833787 None:intergenic
TCATAACAATCATTGGATAG+TGG 0.441820 3.1:-76836026 None:intergenic
TCGTTGCTCATAACAATCAT+TGG 0.446283 3.1:-76836033 None:intergenic
CTGAGGTTGATCGGATTCTC+AGG 0.448079 3.1:+76837183 MS.gene06388:CDS
GGCCAGAAAAGTGGCCAGCC+AGG 0.448570 3.1:+76836576 MS.gene06388:CDS
GTGTCCAAGTCTTATCTAAA+CGG 0.458820 3.1:+76836701 MS.gene06388:CDS
TCAAGGCATGGGATAAAGTC+GGG 0.458938 3.1:-76833831 None:intergenic
CAATCCGTTTAGATAAGACT+TGG 0.459235 3.1:-76836705 None:intergenic
GAAGGAATACCATGCTGCAT+TGG 0.460905 3.1:-76836096 None:intergenic
CTCTGGTAGCTGAGGTTGAT+CGG 0.463097 3.1:+76837174 MS.gene06388:CDS
TTCTGTAGTTCCCGTGCAAA+AGG 0.463204 3.1:+76833155 MS.gene06388:CDS
TTGAGTGTCTCCGTCTCCTT+AGG 0.465804 3.1:-76837350 None:intergenic
AAGGAATACCATGCTGCATT+GGG 0.465896 3.1:-76836095 None:intergenic
AGGTTCAATTTGCTCTTGAG+AGG 0.466968 3.1:+76835218 MS.gene06388:CDS
AAGTCTTATCTAAACGGATT+GGG 0.468240 3.1:+76836707 MS.gene06388:CDS
CGTTTGCCCCAAGCAATGTC+AGG 0.469178 3.1:-76835085 None:intergenic
CCAATTGTACCCAGTCTTGG+AGG 0.469573 3.1:-76833784 None:intergenic
AAAGAGAAAGCCTCCGAAGC+TGG 0.471336 3.1:-76835143 None:intergenic
CGTGCAAAAGGTCGTGCCTC+GGG 0.471678 3.1:+76833167 MS.gene06388:CDS
TGAAAAGAAAGATGAATCAG+AGG 0.472280 3.1:+76833482 MS.gene06388:CDS
ACAGACTGAGGTGAGGGAAC+AGG 0.474299 3.1:+76833212 MS.gene06388:CDS
CAGCGAAGAGGCGTCTACTA+AGG 0.476422 3.1:+76833440 MS.gene06388:CDS
CGGACAATAAGCTTTCCTTC+AGG 0.478801 3.1:-76837206 None:intergenic
GGATGTGGAGTTGCCAGCTT+CGG 0.480928 3.1:+76835130 MS.gene06388:CDS
AGTTAAGGGGCATCAAAATT+GGG 0.484810 3.1:+76834120 MS.gene06388:CDS
GGAAAGCGATTAGGAGTCTT+CGG 0.484828 3.1:+76833859 MS.gene06388:CDS
CCGTGCAAAAGGTCGTGCCT+CGG 0.487700 3.1:+76833166 MS.gene06388:CDS
CCCTTCCCATTATTTATGAA+CGG 0.488962 3.1:+76836948 MS.gene06388:CDS
CTGAAGGAAAGCTTATTGTC+CGG 0.497261 3.1:+76837207 MS.gene06388:CDS
TAACAAACCCTCCTTATCCT+TGG 0.499118 3.1:-76837303 None:intergenic
AGAGTTCCATGGCACATTGA+AGG 0.500328 3.1:+76835328 MS.gene06388:CDS
ATCAAATACTCTCCCAGGGA+AGG 0.510333 3.1:-76835284 None:intergenic
CATGACCTACTCCAAGGATA+AGG 0.511195 3.1:+76837292 MS.gene06388:CDS
GAAGTCCACCTGGCGGCCTA+AGG 0.514851 3.1:+76837334 MS.gene06388:CDS
AAGTGCCCCATGCTTGAATT+GGG 0.517462 3.1:-76834185 None:intergenic
TTGAATTGGGTTCCACCACC+AGG 0.519299 3.1:-76834172 None:intergenic
AGCAGAGTCAAAGAATGAAA+AGG 0.519819 3.1:+76833749 MS.gene06388:CDS
GCTTTCCAGTTGTCAAGGCA+TGG 0.520419 3.1:-76833843 None:intergenic
AGATAGTAATGTAGAGGAGA+AGG 0.521421 3.1:+76833566 MS.gene06388:CDS
AAAGGATGAACATGAAGCTC+AGG 0.523572 3.1:+76835198 MS.gene06388:CDS
TGCAATGTCACTTGCACCAA+AGG 0.524307 3.1:+76835180 MS.gene06388:CDS
TATCAGCAGCAAAATCTTCA+GGG 0.525199 3.1:-76836658 None:intergenic
ATGGAGGAGATCATACGTCC+TGG 0.525368 3.1:-76837020 None:intergenic
TTCAATTTGCTCTTGAGAGG+GGG 0.525841 3.1:+76835221 MS.gene06388:CDS
CACCTGGCGGCCTAAGGAGA+CGG 0.529728 3.1:+76837340 MS.gene06388:CDS
GTGGAACCCAATTCAAGCAT+GGG 0.531941 3.1:+76834179 MS.gene06388:CDS
GGTTCAATTTGCTCTTGAGA+GGG 0.532634 3.1:+76835219 MS.gene06388:CDS
TGCCTTGTCTCTCTTCCTGA+AGG 0.535020 3.1:+76833936 MS.gene06388:CDS
AAGGATCAAGTTAATGGAGT+TGG 0.537672 3.1:+76835984 MS.gene06388:CDS
GCAGCAAAATCTTCAGGGGC+CGG 0.538266 3.1:-76836653 None:intergenic
CAAAGAGGCTTCCCTTCCCT+GGG 0.538740 3.1:+76835272 MS.gene06388:CDS
CATCATCCAAACCCCAATCA+AGG 0.540492 3.1:-76833124 None:intergenic
ACTGCATCAAATACTCTCCC+AGG 0.541601 3.1:-76835289 None:intergenic
CGGCAGTTTGAAGATAATCC+TGG 0.544215 3.1:+76833261 MS.gene06388:CDS
CATTAACGAGCTTGAGAGCA+TGG 0.545161 3.1:+76837244 MS.gene06388:CDS
ATATGGTACATTGGTCAGCC+TGG 0.547368 3.1:-76836594 None:intergenic
TGAAGGAAAGCTTATTGTCC+GGG 0.549044 3.1:+76837208 MS.gene06388:CDS
TGGGATAAAGTCGGGGCCAG+CGG 0.549843 3.1:-76833823 None:intergenic
TTACATTGACTTTATACAAG+AGG 0.550306 3.1:+76834210 MS.gene06388:CDS
GGGAAATATTCTAGAGTAGA+CGG 0.551732 3.1:+76833045 MS.gene06388:CDS
ATTAACAAAATCAATATGCT+GGG 0.551786 3.1:+76835944 MS.gene06388:CDS
GAGATCATACGTCCTGGGAT+AGG 0.553125 3.1:-76837014 None:intergenic
TTGCCTGAGGATGCGACCAA+GGG 0.553259 3.1:+76833288 MS.gene06388:CDS
TGGTTGTCAAGTTCCCAAGT+TGG 0.553335 3.1:+76836617 MS.gene06388:CDS
GGAATACCTCATTTGAACTC+TGG 0.553898 3.1:-76833659 None:intergenic
CTTTCCAGTTGTCAAGGCAT+GGG 0.554013 3.1:-76833842 None:intergenic
GGTCACAGTGGCCAGAAAAG+TGG 0.554071 3.1:+76836567 MS.gene06388:CDS
AAAGTTTGTAATGTTACCGC+TGG 0.554252 3.1:+76833807 MS.gene06388:CDS
TGTGGAGTTGCCAGCTTCGG+AGG 0.557116 3.1:+76835133 MS.gene06388:CDS
CCCATTACAGCAGATATAGC+AGG 0.558260 3.1:-76835247 None:intergenic
GAATTCAGTGGTCAAATGTA+CGG 0.565252 3.1:+76836729 MS.gene06388:CDS
CCCGTTCATAAATAATGGGA+AGG 0.566248 3.1:-76836949 None:intergenic
AGCTCAGACTGAGCCCCGGA+AGG 0.566755 3.1:-76833681 None:intergenic
GTCAAGGCATGGGATAAAGT+CGG 0.567476 3.1:-76833832 None:intergenic
GATCGGATTCTCAGGCCTGA+AGG 0.569364 3.1:+76837191 MS.gene06388:CDS
CTGAACAGAGTATTGCGGCC+TGG 0.570629 3.1:+76835760 MS.gene06388:CDS
AGTTGGAGTCTATGGTAAGC+CGG 0.573432 3.1:+76836634 MS.gene06388:CDS
GGTGGAACCCAATTCAAGCA+TGG 0.579009 3.1:+76834178 MS.gene06388:CDS
GGTAAGAAAACAGAAGATGA+AGG 0.579076 3.1:+76833393 MS.gene06388:CDS
TCTAGCTTCTCTGGTAGCTG+AGG 0.579746 3.1:+76837166 MS.gene06388:CDS
TAATCGCTTTCCAGTTGTCA+AGG 0.579902 3.1:-76833848 None:intergenic
TAGTAATGTAGAGGAGAAGG+TGG 0.580767 3.1:+76833569 MS.gene06388:CDS
CATGCGAACCTCCCACTGCA+TGG 0.581028 3.1:-76837273 None:intergenic
TCAAATACTCTCCCAGGGAA+GGG 0.581519 3.1:-76835283 None:intergenic
GCATCCTCAGGCAAATCACC+AGG 0.581534 3.1:-76833279 None:intergenic
AGGAAGAGAGACAAGGCAGG+TGG 0.585497 3.1:-76833931 None:intergenic
TGAATACCTTCAATGTGCCA+TGG 0.585774 3.1:-76835334 None:intergenic
TATTGTCCGGGACACTGTTG+AGG 0.586039 3.1:+76837220 MS.gene06388:CDS
CTTCCCATTATTTATGAACG+GGG 0.587916 3.1:+76836950 MS.gene06388:CDS
CTTACCATAGACTCCAACTT+GGG 0.588345 3.1:-76836630 None:intergenic
TGACAACCAATATGGTACAT+TGG 0.589602 3.1:-76836603 None:intergenic
CAAAGACCAGAGTTCAAATG+AGG 0.590021 3.1:+76833653 MS.gene06388:CDS
GTTATACTAGATGTTGGATG+TGG 0.591044 3.1:+76835115 MS.gene06388:CDS
GACCTACTCCAAGGATAAGG+AGG 0.591238 3.1:+76837295 MS.gene06388:CDS
TTCAAGAGTCCTCCAAGACT+GGG 0.592523 3.1:+76833775 MS.gene06388:CDS
GATATGAACTCAATCTATGG+AGG 0.592603 3.1:+76836761 MS.gene06388:CDS
GCTCAGACTGAGCCCCGGAA+GGG 0.594249 3.1:-76833680 None:intergenic
TGGAGGAGATCATACGTCCT+GGG 0.597705 3.1:-76837019 None:intergenic
TTGCTGCTGATAATAAACAC+TGG 0.598168 3.1:+76836669 MS.gene06388:CDS
GTCAAATGTACGGAATGTCA+TGG 0.602207 3.1:+76836739 MS.gene06388:CDS
GTGCACGTTGTAGAGTTCCA+TGG 0.602530 3.1:+76835317 MS.gene06388:CDS
CTAAGCTTGCTGAAGTTAAG+GGG 0.603146 3.1:+76834107 MS.gene06388:CDS
GGAAGAGAGACAAGGCAGGT+GGG 0.603261 3.1:-76833930 None:intergenic
TAATGACCTCAACAGTGTCC+CGG 0.603316 3.1:-76837226 None:intergenic
TGTCAGCTCCGAAGAGAAGT+CGG 0.604687 3.1:+76833320 MS.gene06388:CDS
GCTTACCATAGACTCCAACT+TGG 0.604957 3.1:-76836631 None:intergenic
GAAGGAACAGACTGAGGTGA+GGG 0.605363 3.1:+76833206 MS.gene06388:CDS
GATATAAGCGCTCTATTGAG+TGG 0.606444 3.1:+76833958 MS.gene06388:CDS
TTTGCCTGAGGATGCGACCA+AGG 0.606923 3.1:+76833287 MS.gene06388:CDS
GTTCAATTTGCTCTTGAGAG+GGG 0.608000 3.1:+76835220 MS.gene06388:CDS
TTCAGGAAGAGAGACAAGGC+AGG 0.609303 3.1:-76833934 None:intergenic
GGAACTTGTTTCAATCAGCA+AGG 0.612001 3.1:+76835965 MS.gene06388:CDS
TGGAGCTGAACAGAGTATTG+CGG 0.613676 3.1:+76835755 MS.gene06388:CDS
AACAACAGATAGTAATGTAG+AGG 0.614483 3.1:+76833560 MS.gene06388:CDS
AATCATTTAGCACCTATCCC+AGG 0.615139 3.1:+76837002 MS.gene06388:CDS
AAATGAGGTATTCCCTTCCG+GGG 0.618479 3.1:+76833668 MS.gene06388:CDS
CCAGTTAGTTCAAGTGAACG+CGG 0.619426 3.1:+76836545 MS.gene06388:CDS
TGAAGGAACAGACTGAGGTG+AGG 0.620122 3.1:+76833205 MS.gene06388:CDS
TGTTGCTCTAGCCTTGATTG+GGG 0.623280 3.1:+76833113 MS.gene06388:CDS
GTGGCCTAAAAGCAGAGAGA+AGG 0.623669 3.1:+76833977 MS.gene06388:CDS
ACACGTGTTATACTAGATGT+TGG 0.623731 3.1:+76835109 MS.gene06388:CDS
CATGGTAAAGTCCATGCAGT+GGG 0.624917 3.1:+76837262 MS.gene06388:CDS
GAACTCTACAACGTGCACAA+TGG 0.628195 3.1:-76835312 None:intergenic
TTGAAAAGAGATGATCTGCA+TGG 0.628694 3.1:-76837039 None:intergenic
TAGAAGCTCAGACTGAGCCC+CGG 0.630651 3.1:-76833685 None:intergenic
ACTTCAGCAAGCTTAGTGTG+TGG 0.630986 3.1:-76834100 None:intergenic
CTGCTGTAATGGGCACAAAG+AGG 0.637182 3.1:+76835257 MS.gene06388:CDS
CTGCATCAAATACTCTCCCA+GGG 0.637623 3.1:-76835288 None:intergenic
GAAGTCGGAGGAAAATTCCA+CGG 0.637764 3.1:+76833335 MS.gene06388:CDS
ACTCTGCCTGACATTGCTTG+GGG 0.639154 3.1:+76835079 MS.gene06388:CDS
GAAGATGTTGAAATATGGAA+TGG 0.639298 3.1:+76835829 MS.gene06388:CDS
CCGTTCATAAATAATGGGAA+GGG 0.642519 3.1:-76836948 None:intergenic
CTGATGATCCCAATGCAGCA+TGG 0.648087 3.1:+76836087 MS.gene06388:CDS
AAACTGATAATAGCAATGCT+CGG 0.648882 3.1:+76833241 MS.gene06388:CDS
ATATGAACTCAATCTATGGA+GGG 0.649955 3.1:+76836762 MS.gene06388:CDS
GGTTCGCATGACCTACTCCA+AGG 0.652153 3.1:+76837286 MS.gene06388:CDS
CAAGTGAACGCGGGTCACAG+TGG 0.652261 3.1:+76836555 MS.gene06388:CDS
ACCTACTCCAAGGATAAGGA+GGG 0.652538 3.1:+76837296 MS.gene06388:CDS
AGAGAGACAAGGCAGGTGGG+AGG 0.652823 3.1:-76833927 None:intergenic
TATGTGTCCAGAAGTCCACC+TGG 0.655480 3.1:+76837324 MS.gene06388:CDS
AAAGAATCTGATGAAAACGC+TGG 0.656465 3.1:+76833606 MS.gene06388:CDS
AACAGAGTATTGCGGCCTGG+TGG 0.656543 3.1:+76835763 MS.gene06388:CDS
GGTAAAGTCCATGCAGTGGG+AGG 0.657793 3.1:+76837265 MS.gene06388:CDS
GCATGGTAAAGTCCATGCAG+TGG 0.661920 3.1:+76837261 MS.gene06388:CDS
TAAACGGATTGGGAATTCAG+TGG 0.664896 3.1:+76836717 MS.gene06388:CDS
ACCCTCCTTATCCTTGGAGT+AGG 0.669418 3.1:-76837297 None:intergenic
CGTCTCCTTAGGCCGCCAGG+TGG 0.669645 3.1:-76837339 None:intergenic
CAAGGCATGGGATAAAGTCG+GGG 0.669765 3.1:-76833830 None:intergenic
CAGTTAGTTCAAGTGAACGC+GGG 0.672917 3.1:+76836546 MS.gene06388:CDS
ATCAGCAGCAAAATCTTCAG+GGG 0.674815 3.1:-76836657 None:intergenic
ATCCTTCAGGAAGAGAGACA+AGG 0.675474 3.1:-76833938 None:intergenic
AATAATGGGAAGGGTATCTG+CGG 0.678257 3.1:-76836939 None:intergenic
AAATAACAAAGACAGCGAAG+AGG 0.679636 3.1:+76833428 MS.gene06388:CDS
TGCCTGAGGATGCGACCAAG+GGG 0.680547 3.1:+76833289 MS.gene06388:CDS
TGGAACCCAATTCAAGCATG+GGG 0.686380 3.1:+76834180 MS.gene06388:CDS
TGAGGTGAAGGAACAGACTG+AGG 0.690937 3.1:+76833200 MS.gene06388:CDS
AGATACGAAGACAGAAGACG+AGG 0.694255 3.1:+76833371 MS.gene06388:CDS
AAAAGAGATGATCTGCATGG+AGG 0.700577 3.1:-76837036 None:intergenic
ATCTTCAGAAGACTTCTCCG+TGG 0.710231 3.1:-76833352 None:intergenic
GATACGAAGACAGAAGACGA+GGG 0.710853 3.1:+76833372 MS.gene06388:CDS
GTGTCCAGAAGTCCACCTGG+CGG 0.714703 3.1:+76837327 MS.gene06388:CDS
CAGCTCCGAAGAGAAGTCGG+AGG 0.726526 3.1:+76833323 MS.gene06388:CDS
TAATCCTGGTGATTTGCCTG+AGG 0.728544 3.1:+76833275 MS.gene06388:CDS
GCCTGAGGATGCGACCAAGG+GGG 0.732614 3.1:+76833290 MS.gene06388:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTCTTTTTCTTAAAA+GGG - chr3.1:76834382-76834401 None:intergenic 10.0%
!!! CAAAATATAAATTTCTATTT+TGG - chr3.1:76836214-76836233 None:intergenic 10.0%
!! AACAAGTATAAAAATAAAAC+AGG + chr3.1:76836356-76836375 MS.gene06388:intron 15.0%
!! ACAAGTATAAAAATAAAACA+GGG + chr3.1:76836357-76836376 MS.gene06388:intron 15.0%
!! TGGAATGAAAAAAAATATTA+TGG + chr3.1:76834439-76834458 MS.gene06388:intron 15.0%
!! TTTGAAAGATTTGAATATTT+GGG + chr3.1:76836892-76836911 MS.gene06388:CDS 15.0%
!!! CAATATTAACAGATTTTTAA+AGG - chr3.1:76834421-76834440 None:intergenic 15.0%
!!! CTTTAAAAATCTGTTAATAT+TGG + chr3.1:76834419-76834438 MS.gene06388:intron 15.0%
!!! GAGAAATAACATATAATTTT+AGG - chr3.1:76834056-76834075 None:intergenic 15.0%
!!! GATTTTTTCTTTTTCTTAAA+AGG - chr3.1:76834383-76834402 None:intergenic 15.0%
!!! TTTTTGTTTACATGTAAATA+AGG - chr3.1:76835704-76835723 None:intergenic 15.0%
!! ATTAACAAAATCAATATGCT+GGG + chr3.1:76835944-76835963 MS.gene06388:CDS 20.0%
!! TACATTAAAATGCACAAAAA+AGG - chr3.1:76835878-76835897 None:intergenic 20.0%
!! TATCATAATAAAGAGAAACT+TGG - chr3.1:76834539-76834558 None:intergenic 20.0%
!!! ACAAGTTAAACAGAAATTTT+TGG - chr3.1:76834294-76834313 None:intergenic 20.0%
!!! ATCAATATCATGGTAAATTT+TGG - chr3.1:76834891-76834910 None:intergenic 20.0%
!!! ATTTTGAATCGTATTCATTT+AGG + chr3.1:76835404-76835423 MS.gene06388:intron 20.0%
!!! CATTTTGTTTGGATTAAATT+TGG + chr3.1:76834237-76834256 MS.gene06388:intron 20.0%
!!! CTTTGAAAGATTTGAATATT+TGG + chr3.1:76836891-76836910 MS.gene06388:CDS 20.0%
!!! TTTTTGGTATATATCATGAT+TGG + chr3.1:76836975-76836994 MS.gene06388:CDS 20.0%
!!! TTTTTTGTGCATTTTAATGT+AGG + chr3.1:76835877-76835896 MS.gene06388:intron 20.0%
! AACCATAATAAAAAGTTTGC+TGG - chr3.1:76837111-76837130 None:intergenic 25.0%
! AATCATGTTAACTAGGATAT+TGG - chr3.1:76835667-76835686 None:intergenic 25.0%
! ATAATACATGTAAATGTCAC+TGG + chr3.1:76835475-76835494 MS.gene06388:intron 25.0%
! ATCTAGTAATCATGTTAACT+AGG - chr3.1:76835674-76835693 None:intergenic 25.0%
! ATGAAGGTAAATCAATATCA+TGG - chr3.1:76834901-76834920 None:intergenic 25.0%
! CATTAACAAAATCAATATGC+TGG + chr3.1:76835943-76835962 MS.gene06388:CDS 25.0%
! TGTAGAAGATCATTTAATGA+AGG - chr3.1:76834917-76834936 None:intergenic 25.0%
! TTTCTCTTTATTATGATACC+TGG + chr3.1:76834541-76834560 MS.gene06388:intron 25.0%
!! AACCAGCAAACTTTTTATTA+TGG + chr3.1:76837106-76837125 MS.gene06388:intron 25.0%
!! ATAAAACAGGGCTTTTTATT+TGG + chr3.1:76836369-76836388 MS.gene06388:intron 25.0%
!!! GTCTTTGTTATTTTCTGTAT+TGG - chr3.1:76833421-76833440 None:intergenic 25.0%
!!! TGTTTGTTATACAGCTATTT+TGG + chr3.1:76835502-76835521 MS.gene06388:intron 25.0%
!!! TTACATTGACTTTATACAAG+AGG + chr3.1:76834210-76834229 MS.gene06388:CDS 25.0%
AAACTGATAATAGCAATGCT+CGG + chr3.1:76833241-76833260 MS.gene06388:CDS 30.0%
AAAGTCATTGAAGAACTTTC+AGG - chr3.1:76834739-76834758 None:intergenic 30.0%
AACAACAGATAGTAATGTAG+AGG + chr3.1:76833560-76833579 MS.gene06388:CDS 30.0%
ATATGAACTCAATCTATGGA+GGG + chr3.1:76836762-76836781 MS.gene06388:CDS 30.0%
ATGGATATGAACTCAATCTA+TGG + chr3.1:76836758-76836777 MS.gene06388:CDS 30.0%
ATGTGCAGTTCATATGTATT+AGG - chr3.1:76834847-76834866 None:intergenic 30.0%
CAAAAACAATTTACAACTGC+AGG + chr3.1:76835718-76835737 MS.gene06388:intron 30.0%
CGTATCTTAATTTCCTCTAT+TGG - chr3.1:76834774-76834793 None:intergenic 30.0%
GAAGATGTTGAAATATGGAA+TGG + chr3.1:76835829-76835848 MS.gene06388:CDS 30.0%
GACTAATTCAGCAATTAACT+CGG - chr3.1:76836237-76836256 None:intergenic 30.0%
GGCATTTATCAATCTTAACT+TGG + chr3.1:76835425-76835444 MS.gene06388:intron 30.0%
TAGAGGAAATTAAGATACGT+TGG + chr3.1:76834775-76834794 MS.gene06388:intron 30.0%
TCAAAATTGGGTGAAAGTTA+CGG + chr3.1:76834132-76834151 MS.gene06388:CDS 30.0%
TCATAACAATCATTGGATAG+TGG - chr3.1:76836029-76836048 None:intergenic 30.0%
TGAAAAGAAAGATGAATCAG+AGG + chr3.1:76833482-76833501 MS.gene06388:CDS 30.0%
TTCCATATTTCAACATCTTC+AGG - chr3.1:76835829-76835848 None:intergenic 30.0%
TTCCTGAAGATGTTGAAATA+TGG + chr3.1:76835824-76835843 MS.gene06388:CDS 30.0%
TTTACAATGTTTACTCGATG+TGG + chr3.1:76835012-76835031 MS.gene06388:intron 30.0%
! AAGTCTTATCTAAACGGATT+GGG + chr3.1:76836707-76836726 MS.gene06388:CDS 30.0%
! TCAATTGTCATTTCATTCTC+TGG + chr3.1:76834016-76834035 MS.gene06388:intron 30.0%
! TCTTTTCAAAGGTTCAGAAA+AGG + chr3.1:76837053-76837072 MS.gene06388:CDS 30.0%
! TTTTGCTAATGCTTATTTGG+TGG + chr3.1:76837129-76837148 MS.gene06388:intron 30.0%
!! AAGTTTGCTGGTTATTAATG+TGG - chr3.1:76837099-76837118 None:intergenic 30.0%
!! AGTTTGCTGGTTATTAATGT+GGG - chr3.1:76837098-76837117 None:intergenic 30.0%
!! CAGATTTTTAAAGGCTATAC+TGG - chr3.1:76834412-76834431 None:intergenic 30.0%
!! TGGTTTTGCTAATGCTTATT+TGG + chr3.1:76837126-76837145 MS.gene06388:intron 30.0%
!! TTGTTATACAGCTATTTTGG+TGG + chr3.1:76835505-76835524 MS.gene06388:intron 30.0%
!!! TGTTATACAGCTATTTTGGT+GGG + chr3.1:76835506-76835525 MS.gene06388:intron 30.0%
AAACAATTTACAACTGCAGG+TGG + chr3.1:76835721-76835740 MS.gene06388:intron 35.0%
AAAGAATCTGATGAAAACGC+TGG + chr3.1:76833606-76833625 MS.gene06388:CDS 35.0%
AAAGTTTGTAATGTTACCGC+TGG + chr3.1:76833807-76833826 MS.gene06388:CDS 35.0%
AAATAACAAAGACAGCGAAG+AGG + chr3.1:76833428-76833447 MS.gene06388:CDS 35.0%
AAGACCCCGTTCATAAATAA+TGG - chr3.1:76836957-76836976 None:intergenic 35.0%
AAGGATCAAGTTAATGGAGT+TGG + chr3.1:76835984-76836003 MS.gene06388:CDS 35.0%
AATGAAACTACGACACAAAC+TGG + chr3.1:76833708-76833727 MS.gene06388:CDS 35.0%
ACAAACAATTTCTTCACTCC+AGG - chr3.1:76834562-76834581 None:intergenic 35.0%
ACACGTGTTATACTAGATGT+TGG + chr3.1:76835109-76835128 MS.gene06388:CDS 35.0%
ACTTCTTCTGATAAAGAAGC+TGG - chr3.1:76834942-76834961 None:intergenic 35.0%
AGAAAACACCATGTCAGTTA+AGG - chr3.1:76836121-76836140 None:intergenic 35.0%
AGACCCCGTTCATAAATAAT+GGG - chr3.1:76836956-76836975 None:intergenic 35.0%
AGATAGTAATGTAGAGGAGA+AGG + chr3.1:76833566-76833585 MS.gene06388:CDS 35.0%
AGCAGAGTCAAAGAATGAAA+AGG + chr3.1:76833749-76833768 MS.gene06388:CDS 35.0%
ATCAGCAAGGATCAAGTTAA+TGG + chr3.1:76835978-76835997 MS.gene06388:CDS 35.0%
ATCTTGTTGATCTAAGCTTG+TGG + chr3.1:76834487-76834506 MS.gene06388:intron 35.0%
CAAAATTGGGTGAAAGTTAC+GGG + chr3.1:76834133-76834152 MS.gene06388:CDS 35.0%
CAATCCGTTTAGATAAGACT+TGG - chr3.1:76836708-76836727 None:intergenic 35.0%
CATTGTAATACCATATCTGC+AGG - chr3.1:76834078-76834097 None:intergenic 35.0%
CCCTTCCCATTATTTATGAA+CGG + chr3.1:76836948-76836967 MS.gene06388:CDS 35.0%
CCTTCCCATTATTTATGAAC+GGG + chr3.1:76836949-76836968 MS.gene06388:CDS 35.0%
CTTCCCATTATTTATGAACG+GGG + chr3.1:76836950-76836969 MS.gene06388:CDS 35.0%
GAATTCAGTGGTCAAATGTA+CGG + chr3.1:76836729-76836748 MS.gene06388:CDS 35.0%
GATATGAACTCAATCTATGG+AGG + chr3.1:76836761-76836780 MS.gene06388:CDS 35.0%
GGTAAGAAAACAGAAGATGA+AGG + chr3.1:76833393-76833412 MS.gene06388:CDS 35.0%
GTTATACTAGATGTTGGATG+TGG + chr3.1:76835115-76835134 MS.gene06388:CDS 35.0%
TAATTTCCTCTATTGGCAGT+TGG - chr3.1:76834767-76834786 None:intergenic 35.0%
TATCAGCAGCAAAATCTTCA+GGG - chr3.1:76836661-76836680 None:intergenic 35.0%
TATTCCTTCCTTAACTGACA+TGG + chr3.1:76836110-76836129 MS.gene06388:intron 35.0%
TCAGGAAGCTTCTGATAAAT+AGG - chr3.1:76835811-76835830 None:intergenic 35.0%
TCGTTGCTCATAACAATCAT+TGG - chr3.1:76836036-76836055 None:intergenic 35.0%
TCTTGTTGATCTAAGCTTGT+GGG + chr3.1:76834488-76834507 MS.gene06388:intron 35.0%
TGACAACCAATATGGTACAT+TGG - chr3.1:76836606-76836625 None:intergenic 35.0%
TGCATCATCAAAGCTCTATT+AGG - chr3.1:76835058-76835077 None:intergenic 35.0%
TGCTGTGTAATTCAAACACA+TGG - chr3.1:76835606-76835625 None:intergenic 35.0%
TGTGACAACTTGACAAGTTA+GGG - chr3.1:76834359-76834378 None:intergenic 35.0%
TTATCAGCAGCAAAATCTTC+AGG - chr3.1:76836662-76836681 None:intergenic 35.0%
TTGAAAAGAGATGATCTGCA+TGG - chr3.1:76837042-76837061 None:intergenic 35.0%
TTGCTGCTGATAATAAACAC+TGG + chr3.1:76836669-76836688 MS.gene06388:CDS 35.0%
! ATTTATGAACGGGGTCTTTT+TGG + chr3.1:76836959-76836978 MS.gene06388:CDS 35.0%
! CAAGTCTTATCTAAACGGAT+TGG + chr3.1:76836706-76836725 MS.gene06388:CDS 35.0%
! CCGTTCATAAATAATGGGAA+GGG - chr3.1:76836951-76836970 None:intergenic 35.0%
! GTGTCCAAGTCTTATCTAAA+CGG + chr3.1:76836701-76836720 MS.gene06388:CDS 35.0%
! TCATCAGATTTTTGACACAG+TGG - chr3.1:76836074-76836093 None:intergenic 35.0%
! TGCAGATCATCTCTTTTCAA+AGG + chr3.1:76837042-76837061 MS.gene06388:CDS 35.0%
!! AAGTTAAGGGGCATCAAAAT+TGG + chr3.1:76834119-76834138 MS.gene06388:CDS 35.0%
!! ACTAAGCTTGCTGAAGTTAA+GGG + chr3.1:76834106-76834125 MS.gene06388:CDS 35.0%
!! AGTTAAGGGGCATCAAAATT+GGG + chr3.1:76834120-76834139 MS.gene06388:CDS 35.0%
!! CAAGAGGTATGCATTTTGTT+TGG + chr3.1:76834226-76834245 MS.gene06388:intron 35.0%
!! GGGAAATATTCTAGAGTAGA+CGG + chr3.1:76833045-76833064 MS.gene06388:CDS 35.0%
!! TGTTATTTCTCCTGCAGATA+TGG + chr3.1:76834065-76834084 MS.gene06388:intron 35.0%
!! TTAACCTTCTCTCTGCTTTT+AGG - chr3.1:76833984-76834003 None:intergenic 35.0%
!! TTTTAAAGGCTATACTGGTG+CGG - chr3.1:76834407-76834426 None:intergenic 35.0%
!!! GTTATACAGCTATTTTGGTG+GGG + chr3.1:76835507-76835526 MS.gene06388:intron 35.0%
AAAAGAGATGATCTGCATGG+AGG - chr3.1:76837039-76837058 None:intergenic 40.0%
AAAGGATGAACATGAAGCTC+AGG + chr3.1:76835198-76835217 MS.gene06388:CDS 40.0%
AACACCATGTCAGTTAAGGA+AGG - chr3.1:76836117-76836136 None:intergenic 40.0%
AAGGAATACCATGCTGCATT+GGG - chr3.1:76836098-76836117 None:intergenic 40.0%
AATCATTTAGCACCTATCCC+AGG + chr3.1:76837002-76837021 MS.gene06388:CDS 40.0%
AGTCTAATCTCTGATGTGAC+AGG + chr3.1:76836489-76836508 MS.gene06388:intron 40.0%
ATATGAACTGCACATCTGTG+AGG + chr3.1:76834852-76834871 MS.gene06388:intron 40.0%
ATCAGCAGCAAAATCTTCAG+GGG - chr3.1:76836660-76836679 None:intergenic 40.0%
CAAAGACCAGAGTTCAAATG+AGG + chr3.1:76833653-76833672 MS.gene06388:CDS 40.0%
CAATCGGTAGATGTCAAACA+CGG - chr3.1:76836850-76836869 None:intergenic 40.0%
CCTGCTATATCTGCTGTAAT+GGG + chr3.1:76835247-76835266 MS.gene06388:CDS 40.0%
CTGAAGGAAAGCTTATTGTC+CGG + chr3.1:76837207-76837226 MS.gene06388:CDS 40.0%
CTTACCATAGACTCCAACTT+GGG - chr3.1:76836633-76836652 None:intergenic 40.0%
GACCATACAAAAAAACCACC+AGG - chr3.1:76835781-76835800 None:intergenic 40.0%
GATATAAGCGCTCTATTGAG+TGG + chr3.1:76833958-76833977 MS.gene06388:CDS 40.0%
GGAATACCTCATTTGAACTC+TGG - chr3.1:76833662-76833681 None:intergenic 40.0%
GGAGAGTAAAAATGAGGTGA+AGG + chr3.1:76833188-76833207 MS.gene06388:CDS 40.0%
GTCAAATGTACGGAATGTCA+TGG + chr3.1:76836739-76836758 MS.gene06388:CDS 40.0%
GTGTGACAACTTGACAAGTT+AGG - chr3.1:76834360-76834379 None:intergenic 40.0%
TAACAAACCCTCCTTATCCT+TGG - chr3.1:76837306-76837325 None:intergenic 40.0%
TAATCGCTTTCCAGTTGTCA+AGG - chr3.1:76833851-76833870 None:intergenic 40.0%
TAGTAATGTAGAGGAGAAGG+TGG + chr3.1:76833569-76833588 MS.gene06388:CDS 40.0%
TCCTGCTATATCTGCTGTAA+TGG + chr3.1:76835246-76835265 MS.gene06388:CDS 40.0%
TGAAGGAAAGCTTATTGTCC+GGG + chr3.1:76837208-76837227 MS.gene06388:CDS 40.0%
TGAATACCTTCAATGTGCCA+TGG - chr3.1:76835337-76835356 None:intergenic 40.0%
TGAGCTTCATGTTCATCCTT+TGG - chr3.1:76835199-76835218 None:intergenic 40.0%
TGGGAACTTGACAACCAATA+TGG - chr3.1:76836614-76836633 None:intergenic 40.0%
TTGACAACTGGAAAGCGATT+AGG + chr3.1:76833850-76833869 MS.gene06388:CDS 40.0%
TTTCAAAGCTGCAGCAAATC+TGG - chr3.1:76836879-76836898 None:intergenic 40.0%
TTTCCAATTGTACCCAGTCT+TGG - chr3.1:76833790-76833809 None:intergenic 40.0%
TTTGTCCTGTTGTGCGTAAA+CGG - chr3.1:76834823-76834842 None:intergenic 40.0%
! AACTGGATCGTTTTCTACAC+AGG + chr3.1:76833725-76833744 MS.gene06388:CDS 40.0%
! AAGCCTTATCCTACTAAGTG+GGG + chr3.1:76836159-76836178 MS.gene06388:intron 40.0%
! AGGTTCAATTTGCTCTTGAG+AGG + chr3.1:76835218-76835237 MS.gene06388:CDS 40.0%
! ATAGAGCGCTTATATCCTTC+AGG - chr3.1:76833954-76833973 None:intergenic 40.0%
! ATTTTCCTCCGACTTCTCTT+CGG - chr3.1:76833331-76833350 None:intergenic 40.0%
! CAAGCCTTATCCTACTAAGT+GGG + chr3.1:76836158-76836177 MS.gene06388:intron 40.0%
! CCCGTTCATAAATAATGGGA+AGG - chr3.1:76836952-76836971 None:intergenic 40.0%
! CTCATTTGAACTCTGGTCTT+TGG - chr3.1:76833655-76833674 None:intergenic 40.0%
! GGAACTTGTTTCAATCAGCA+AGG + chr3.1:76835965-76835984 MS.gene06388:CDS 40.0%
! GGATAGTGGCTTCTTGTATA+TGG - chr3.1:76836015-76836034 None:intergenic 40.0%
! GGTTCAATTTGCTCTTGAGA+GGG + chr3.1:76835219-76835238 MS.gene06388:CDS 40.0%
! GTTCAATTTGCTCTTGAGAG+GGG + chr3.1:76835220-76835239 MS.gene06388:CDS 40.0%
! TCAAATGAGGTATTCCCTTC+CGG + chr3.1:76833666-76833685 MS.gene06388:CDS 40.0%
! TCAGATTTTTGACACAGTGG+AGG - chr3.1:76836071-76836090 None:intergenic 40.0%
! TGCAGGTGGTAAACTTCTTT+TGG + chr3.1:76835735-76835754 MS.gene06388:intron 40.0%
! TGTTTGACATCTACCGATTG+TGG + chr3.1:76836850-76836869 MS.gene06388:intron 40.0%
! TTCAATTTGCTCTTGAGAGG+GGG + chr3.1:76835221-76835240 MS.gene06388:CDS 40.0%
!! AACAGGGCTTTTTATTTGGC+TGG + chr3.1:76836373-76836392 MS.gene06388:intron 40.0%
!! AATAATGGGAAGGGTATCTG+CGG - chr3.1:76836942-76836961 None:intergenic 40.0%
!! CACTAAGCTTGCTGAAGTTA+AGG + chr3.1:76834105-76834124 MS.gene06388:CDS 40.0%
!! CTAAGCTTGCTGAAGTTAAG+GGG + chr3.1:76834107-76834126 MS.gene06388:CDS 40.0%
!! GAGTATCTTACTTTTCCTGG+TGG + chr3.1:76834157-76834176 MS.gene06388:CDS 40.0%
!! GGTGAGTATCTTACTTTTCC+TGG + chr3.1:76834154-76834173 MS.gene06388:CDS 40.0%
!! TAAACGGATTGGGAATTCAG+TGG + chr3.1:76836717-76836736 MS.gene06388:CDS 40.0%
!! TATCTTACTTTTCCTGGTGG+TGG + chr3.1:76834160-76834179 MS.gene06388:CDS 40.0%
!! TCACTTTTCCAAGACAGGAA+GGG - chr3.1:76836321-76836340 None:intergenic 40.0%
!! TTGTTGCTCTAGCCTTGATT+GGG + chr3.1:76833112-76833131 MS.gene06388:CDS 40.0%
!! TTTGTTGCTCTAGCCTTGAT+TGG + chr3.1:76833111-76833130 MS.gene06388:CDS 40.0%
AAGTGCCCCATGCTTGAATT+GGG - chr3.1:76834188-76834207 None:intergenic 45.0%
ACAGTTTAGACCGAACTGGT+AGG + chr3.1:76834623-76834642 MS.gene06388:intron 45.0%
ACCTACTCCAAGGATAAGGA+GGG + chr3.1:76837296-76837315 MS.gene06388:CDS 45.0%
ACTGCATCAAATACTCTCCC+AGG - chr3.1:76835292-76835311 None:intergenic 45.0%
ACTTCAGCAAGCTTAGTGTG+TGG - chr3.1:76834103-76834122 None:intergenic 45.0%
AGAGTTCCATGGCACATTGA+AGG + chr3.1:76835328-76835347 MS.gene06388:CDS 45.0%
AGATACGAAGACAGAAGACG+AGG + chr3.1:76833371-76833390 MS.gene06388:CDS 45.0%
AGTTGGAGTCTATGGTAAGC+CGG + chr3.1:76836634-76836653 MS.gene06388:CDS 45.0%
ATATGGTACATTGGTCAGCC+TGG - chr3.1:76836597-76836616 None:intergenic 45.0%
ATCAAATACTCTCCCAGGGA+AGG - chr3.1:76835287-76835306 None:intergenic 45.0%
ATCCTTCAGGAAGAGAGACA+AGG - chr3.1:76833941-76833960 None:intergenic 45.0%
ATCTTCAGAAGACTTCTCCG+TGG - chr3.1:76833355-76833374 None:intergenic 45.0%
ATTCAAGAGTCCTCCAAGAC+TGG + chr3.1:76833774-76833793 MS.gene06388:CDS 45.0%
CAGTTAGTTCAAGTGAACGC+GGG + chr3.1:76836546-76836565 MS.gene06388:CDS 45.0%
CATCATCCAAACCCCAATCA+AGG - chr3.1:76833127-76833146 None:intergenic 45.0%
CATGACCTACTCCAAGGATA+AGG + chr3.1:76837292-76837311 MS.gene06388:CDS 45.0%
CATGGTAAAGTCCATGCAGT+GGG + chr3.1:76837262-76837281 MS.gene06388:CDS 45.0%
CATTAACGAGCTTGAGAGCA+TGG + chr3.1:76837244-76837263 MS.gene06388:CDS 45.0%
CCACTTAGTAGGATAAGGCT+TGG - chr3.1:76836160-76836179 None:intergenic 45.0%
CCAGTTAGTTCAAGTGAACG+CGG + chr3.1:76836545-76836564 MS.gene06388:CDS 45.0%
CCCATTACAGCAGATATAGC+AGG - chr3.1:76835250-76835269 None:intergenic 45.0%
CGGACAATAAGCTTTCCTTC+AGG - chr3.1:76837209-76837228 None:intergenic 45.0%
CGGCAGTTTGAAGATAATCC+TGG + chr3.1:76833261-76833280 MS.gene06388:CDS 45.0%
CTGCATCAAATACTCTCCCA+GGG - chr3.1:76835291-76835310 None:intergenic 45.0%
CTTATCCTACTAAGTGGGGT+CGG + chr3.1:76836163-76836182 MS.gene06388:intron 45.0%
CTTCCTGTCTTGGAAAAGTG+AGG + chr3.1:76836320-76836339 MS.gene06388:intron 45.0%
CTTTCCAGTTGTCAAGGCAT+GGG - chr3.1:76833845-76833864 None:intergenic 45.0%
GAACTCTACAACGTGCACAA+TGG - chr3.1:76835315-76835334 None:intergenic 45.0%
GAAGGAATACCATGCTGCAT+TGG - chr3.1:76836099-76836118 None:intergenic 45.0%
GAAGTCGGAGGAAAATTCCA+CGG + chr3.1:76833335-76833354 MS.gene06388:CDS 45.0%
GATACGAAGACAGAAGACGA+GGG + chr3.1:76833372-76833391 MS.gene06388:CDS 45.0%
GCAAATCTGGAAGCCACAAT+CGG - chr3.1:76836866-76836885 None:intergenic 45.0%
GCTTACCATAGACTCCAACT+TGG - chr3.1:76836634-76836653 None:intergenic 45.0%
GGAAAGCGATTAGGAGTCTT+CGG + chr3.1:76833859-76833878 MS.gene06388:CDS 45.0%
GGCTGACCAATGTACCATAT+TGG + chr3.1:76836597-76836616 MS.gene06388:CDS 45.0%
GTCAAGGCATGGGATAAAGT+CGG - chr3.1:76833835-76833854 None:intergenic 45.0%
GTGGAACCCAATTCAAGCAT+GGG + chr3.1:76834179-76834198 MS.gene06388:CDS 45.0%
TAATGACCTCAACAGTGTCC+CGG - chr3.1:76837229-76837248 None:intergenic 45.0%
TACCAGTTCGGTCTAAACTG+TGG - chr3.1:76834624-76834643 None:intergenic 45.0%
TCAAATACTCTCCCAGGGAA+GGG - chr3.1:76835286-76835305 None:intergenic 45.0%
TCAAGGCATGGGATAAAGTC+GGG - chr3.1:76833834-76833853 None:intergenic 45.0%
TCTGTACCAACTGCCAATAG+AGG + chr3.1:76834758-76834777 MS.gene06388:intron 45.0%
TGGAACCCAATTCAAGCATG+GGG + chr3.1:76834180-76834199 MS.gene06388:CDS 45.0%
TGGTTGTCAAGTTCCCAAGT+TGG + chr3.1:76836617-76836636 MS.gene06388:CDS 45.0%
TTAGACCGAACTGGTAGGAA+TGG + chr3.1:76834628-76834647 MS.gene06388:intron 45.0%
TTATCCCATGCCTTGACAAC+TGG + chr3.1:76833838-76833857 MS.gene06388:CDS 45.0%
TTCAAGAGTCCTCCAAGACT+GGG + chr3.1:76833775-76833794 MS.gene06388:CDS 45.0%
TTCTGTAGTTCCCGTGCAAA+AGG + chr3.1:76833155-76833174 MS.gene06388:CDS 45.0%
TTGTCCTGTTGTGCGTAAAC+GGG - chr3.1:76834822-76834841 None:intergenic 45.0%
! AAATGAGGTATTCCCTTCCG+GGG + chr3.1:76833668-76833687 MS.gene06388:CDS 45.0%
! ACTTTTCCAAGACAGGAAGG+GGG - chr3.1:76836319-76836338 None:intergenic 45.0%
! AGTTCCCAAGTTGGAGTCTA+TGG + chr3.1:76836626-76836645 MS.gene06388:CDS 45.0%
! ATGTGCCATTCCTACCAGTT+CGG - chr3.1:76834636-76834655 None:intergenic 45.0%
! CAAATGAGGTATTCCCTTCC+GGG + chr3.1:76833667-76833686 MS.gene06388:CDS 45.0%
! CACTTTTCCAAGACAGGAAG+GGG - chr3.1:76836320-76836339 None:intergenic 45.0%
! CAGATGCAATCTAGCTTCTC+TGG + chr3.1:76837157-76837176 MS.gene06388:intron 45.0%
! CCAAGCCTTATCCTACTAAG+TGG + chr3.1:76836157-76836176 MS.gene06388:intron 45.0%
! TAATCCTGGTGATTTGCCTG+AGG + chr3.1:76833275-76833294 MS.gene06388:CDS 45.0%
! TGCAATGTCACTTGCACCAA+AGG + chr3.1:76835180-76835199 MS.gene06388:CDS 45.0%
!! ACCTCATTTTTACTCTCCCG+AGG - chr3.1:76833186-76833205 None:intergenic 45.0%
!! CTCACTTTTCCAAGACAGGA+AGG - chr3.1:76836322-76836341 None:intergenic 45.0%
!! GTTCCTCACTTTTCCAAGAC+AGG - chr3.1:76836326-76836345 None:intergenic 45.0%
!! TGGAGCTGAACAGAGTATTG+CGG + chr3.1:76835755-76835774 MS.gene06388:CDS 45.0%
!! TGTTGCTCTAGCCTTGATTG+GGG + chr3.1:76833113-76833132 MS.gene06388:CDS 45.0%
!!! ATACAGCTATTTTGGTGGGG+TGG + chr3.1:76835510-76835529 MS.gene06388:intron 45.0%
!!! GGCCTGGTGGTTTTTTTGTA+TGG + chr3.1:76835776-76835795 MS.gene06388:CDS 45.0%
!!! TACAGCTATTTTGGTGGGGT+GGG + chr3.1:76835511-76835530 MS.gene06388:intron 45.0%
AAAGAGAAAGCCTCCGAAGC+TGG - chr3.1:76835146-76835165 None:intergenic 50.0%
ACCCTCCTTATCCTTGGAGT+AGG - chr3.1:76837300-76837319 None:intergenic 50.0%
ACTCTGCCTGACATTGCTTG+GGG + chr3.1:76835079-76835098 MS.gene06388:CDS 50.0%
AGACTCTGCCTGACATTGCT+TGG + chr3.1:76835077-76835096 MS.gene06388:intron 50.0%
CAAGGCATGGGATAAAGTCG+GGG - chr3.1:76833833-76833852 None:intergenic 50.0%
CCAATTGTACCCAGTCTTGG+AGG - chr3.1:76833787-76833806 None:intergenic 50.0%
CCGCGTTCACTTGAACTAAC+TGG - chr3.1:76836548-76836567 None:intergenic 50.0%
CCTCCAAGACTGGGTACAAT+TGG + chr3.1:76833784-76833803 MS.gene06388:CDS 50.0%
CGACCCCACTTAGTAGGATA+AGG - chr3.1:76836165-76836184 None:intergenic 50.0%
CGGTAGATGTCAAACACGGA+AGG - chr3.1:76836846-76836865 None:intergenic 50.0%
CTGATGATCCCAATGCAGCA+TGG + chr3.1:76836087-76836106 MS.gene06388:CDS 50.0%
GAAGGAACAGACTGAGGTGA+GGG + chr3.1:76833206-76833225 MS.gene06388:CDS 50.0%
GACCTACTCCAAGGATAAGG+AGG + chr3.1:76837295-76837314 MS.gene06388:CDS 50.0%
GACTCTGCCTGACATTGCTT+GGG + chr3.1:76835078-76835097 MS.gene06388:intron 50.0%
GCATGGTAAAGTCCATGCAG+TGG + chr3.1:76837261-76837280 MS.gene06388:CDS 50.0%
GCCTCGGGAGAGTAAAAATG+AGG + chr3.1:76833182-76833201 MS.gene06388:CDS 50.0%
GCTTTCCAGTTGTCAAGGCA+TGG - chr3.1:76833846-76833865 None:intergenic 50.0%
GGTGGAACCCAATTCAAGCA+TGG + chr3.1:76834178-76834197 MS.gene06388:CDS 50.0%
GTGCACGTTGTAGAGTTCCA+TGG + chr3.1:76835317-76835336 MS.gene06388:CDS 50.0%
GTGGCCTAAAAGCAGAGAGA+AGG + chr3.1:76833977-76833996 MS.gene06388:CDS 50.0%
TATGTGTCCAGAAGTCCACC+TGG + chr3.1:76837324-76837343 MS.gene06388:CDS 50.0%
TATTGTCCGGGACACTGTTG+AGG + chr3.1:76837220-76837239 MS.gene06388:CDS 50.0%
TGAAGGAACAGACTGAGGTG+AGG + chr3.1:76833205-76833224 MS.gene06388:CDS 50.0%
TGAGGTGAAGGAACAGACTG+AGG + chr3.1:76833200-76833219 MS.gene06388:CDS 50.0%
TGCCACAGTTTAGACCGAAC+TGG + chr3.1:76834619-76834638 MS.gene06388:intron 50.0%
TGCCTTGTCTCTCTTCCTGA+AGG + chr3.1:76833936-76833955 MS.gene06388:CDS 50.0%
TGTCAGCTCCGAAGAGAAGT+CGG + chr3.1:76833320-76833339 MS.gene06388:CDS 50.0%
TGTCCTGTTGTGCGTAAACG+GGG - chr3.1:76834821-76834840 None:intergenic 50.0%
TTCAGGAAGAGAGACAAGGC+AGG - chr3.1:76833937-76833956 None:intergenic 50.0%
TTCTTACCCCCTTCCTGTCT+TGG + chr3.1:76836310-76836329 MS.gene06388:intron 50.0%
TTGAATTGGGTTCCACCACC+AGG - chr3.1:76834175-76834194 None:intergenic 50.0%
TTGAGTGTCTCCGTCTCCTT+AGG - chr3.1:76837353-76837372 None:intergenic 50.0%
! CTCTGGTAGCTGAGGTTGAT+CGG + chr3.1:76837174-76837193 MS.gene06388:CDS 50.0%
! CTGAGGTTGATCGGATTCTC+AGG + chr3.1:76837183-76837202 MS.gene06388:CDS 50.0%
! GAAGTGCCCCATGCTTGAAT+TGG - chr3.1:76834189-76834208 None:intergenic 50.0%
! TCTAGCTTCTCTGGTAGCTG+AGG + chr3.1:76837166-76837185 MS.gene06388:CDS 50.0%
! TTTTGGTGGGGTGGGTATGT+TGG + chr3.1:76835519-76835538 MS.gene06388:intron 50.0%
!! CTCTAGCCTTGATTGGGGTT+TGG + chr3.1:76833118-76833137 MS.gene06388:CDS 50.0%
!! CTGCTGTAATGGGCACAAAG+AGG + chr3.1:76835257-76835276 MS.gene06388:CDS 50.0%
ACAAAGAGGCTTCCCTTCCC+TGG + chr3.1:76835271-76835290 MS.gene06388:CDS 55.0%
ACAGACTGAGGTGAGGGAAC+AGG + chr3.1:76833212-76833231 MS.gene06388:CDS 55.0%
ACTAAGTGGGGTCGGCTATG+TGG + chr3.1:76836171-76836190 MS.gene06388:intron 55.0%
ACTGCACATCTGTGAGGCAC+TGG + chr3.1:76834858-76834877 MS.gene06388:intron 55.0%
AGGAAGAGAGACAAGGCAGG+TGG - chr3.1:76833934-76833953 None:intergenic 55.0%
CAAAGAGGCTTCCCTTCCCT+GGG + chr3.1:76835272-76835291 MS.gene06388:CDS 55.0%
CATAGCCGACCCCACTTAGT+AGG - chr3.1:76836171-76836190 None:intergenic 55.0%
CGTTTGCCCCAAGCAATGTC+AGG - chr3.1:76835088-76835107 None:intergenic 55.0%
GATCGGATTCTCAGGCCTGA+AGG + chr3.1:76837191-76837210 MS.gene06388:CDS 55.0%
GCAGCAAAATCTTCAGGGGC+CGG - chr3.1:76836656-76836675 None:intergenic 55.0%
GCATCCTCAGGCAAATCACC+AGG - chr3.1:76833282-76833301 None:intergenic 55.0%
GCTGACATTGCTATCCCCCT+TGG - chr3.1:76833307-76833326 None:intergenic 55.0%
GCTTGTGGGAAGCAGCTCAT+AGG + chr3.1:76834502-76834521 MS.gene06388:intron 55.0%
GGAAGAGAGACAAGGCAGGT+GGG - chr3.1:76833933-76833952 None:intergenic 55.0%
GGATGTGGAGTTGCCAGCTT+CGG + chr3.1:76835130-76835149 MS.gene06388:CDS 55.0%
GGTAAAGTCCATGCAGTGGG+AGG + chr3.1:76837265-76837284 MS.gene06388:CDS 55.0%
GGTCACAGTGGCCAGAAAAG+TGG + chr3.1:76836567-76836586 MS.gene06388:CDS 55.0%
GGTTCGCATGACCTACTCCA+AGG + chr3.1:76837286-76837305 MS.gene06388:CDS 55.0%
TAGAAGCTCAGACTGAGCCC+CGG - chr3.1:76833688-76833707 None:intergenic 55.0%
TTGCCTGAGGATGCGACCAA+GGG + chr3.1:76833288-76833307 MS.gene06388:CDS 55.0%
TTGTGCGTAAACGGGGAGGA+GGG - chr3.1:76834814-76834833 None:intergenic 55.0%
TTTGCCTGAGGATGCGACCA+AGG + chr3.1:76833287-76833306 MS.gene06388:CDS 55.0%
!! AACAGAGTATTGCGGCCTGG+TGG + chr3.1:76835763-76835782 MS.gene06388:CDS 55.0%
!! CAGCGAAGAGGCGTCTACTA+AGG + chr3.1:76833440-76833459 MS.gene06388:CDS 55.0%
!! CTGAACAGAGTATTGCGGCC+TGG + chr3.1:76835760-76835779 MS.gene06388:CDS 55.0%
AGAGAGACAAGGCAGGTGGG+AGG - chr3.1:76833930-76833949 None:intergenic 60.0%
AGGCAGGTGGGAGGTTCTTC+AGG - chr3.1:76833921-76833940 None:intergenic 60.0%
CAAGTGAACGCGGGTCACAG+TGG + chr3.1:76836555-76836574 MS.gene06388:CDS 60.0%
CAGCTCCGAAGAGAAGTCGG+AGG + chr3.1:76833323-76833342 MS.gene06388:CDS 60.0%
CATGCGAACCTCCCACTGCA+TGG - chr3.1:76837276-76837295 None:intergenic 60.0%
CCGTGCAAAAGGTCGTGCCT+CGG + chr3.1:76833166-76833185 MS.gene06388:CDS 60.0%
CCTCCCCGTTTACGCACAAC+AGG + chr3.1:76834815-76834834 MS.gene06388:intron 60.0%
CCTGTTGTGCGTAAACGGGG+AGG - chr3.1:76834818-76834837 None:intergenic 60.0%
CGTGCAAAAGGTCGTGCCTC+GGG + chr3.1:76833167-76833186 MS.gene06388:CDS 60.0%
GGTACATTGGTCAGCCTGGC+TGG - chr3.1:76836593-76836612 None:intergenic 60.0%
GTGTCCAGAAGTCCACCTGG+CGG + chr3.1:76837327-76837346 MS.gene06388:CDS 60.0%
GTTGTGCGTAAACGGGGAGG+AGG - chr3.1:76834815-76834834 None:intergenic 60.0%
TGCCTGAGGATGCGACCAAG+GGG + chr3.1:76833289-76833308 MS.gene06388:CDS 60.0%
TGGGATAAAGTCGGGGCCAG+CGG - chr3.1:76833826-76833845 None:intergenic 60.0%
TGTGCGTAAACGGGGAGGAG+GGG - chr3.1:76834813-76834832 None:intergenic 60.0%
TGTGGAGTTGCCAGCTTCGG+AGG + chr3.1:76835133-76835152 MS.gene06388:CDS 60.0%
! CCGAGGCACGACCTTTTGCA+CGG - chr3.1:76833169-76833188 None:intergenic 60.0%
! CGAGGCACGACCTTTTGCAC+GGG - chr3.1:76833168-76833187 None:intergenic 60.0%
!!! AGCCTGGCTGGCCACTTTTC+TGG - chr3.1:76836581-76836600 None:intergenic 60.0%
AGCTCAGACTGAGCCCCGGA+AGG - chr3.1:76833684-76833703 None:intergenic 65.0%
CACCTGGCGGCCTAAGGAGA+CGG + chr3.1:76837340-76837359 MS.gene06388:CDS 65.0%
GAAGTCCACCTGGCGGCCTA+AGG + chr3.1:76837334-76837353 MS.gene06388:CDS 65.0%
GCCTGAGGATGCGACCAAGG+GGG + chr3.1:76833290-76833309 MS.gene06388:CDS 65.0%
GCTCAGACTGAGCCCCGGAA+GGG - chr3.1:76833683-76833702 None:intergenic 65.0%
GGCCAGAAAAGTGGCCAGCC+AGG + chr3.1:76836576-76836595 MS.gene06388:CDS 65.0%
GTGCGTAAACGGGGAGGAGG+GGG - chr3.1:76834812-76834831 None:intergenic 65.0%
TCCCCCTTGGTCGCATCCTC+AGG - chr3.1:76833294-76833313 None:intergenic 65.0%
TGCGTAAACGGGGAGGAGGG+GGG - chr3.1:76834811-76834830 None:intergenic 65.0%
! TAGGCCGCCAGGTGGACTTC+TGG - chr3.1:76837334-76837353 None:intergenic 65.0%
CGTCTCCTTAGGCCGCCAGG+TGG - chr3.1:76837342-76837361 None:intergenic 70.0%
CTCCGTCTCCTTAGGCCGCC+AGG - chr3.1:76837345-76837364 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 76833036 76837388 76833036 ID=MS.gene06388
chr3.1 mRNA 76833036 76837388 76833036 ID=MS.gene06388.t1;Parent=MS.gene06388
chr3.1 exon 76833036 76833998 76833036 ID=MS.gene06388.t1.exon1;Parent=MS.gene06388.t1
chr3.1 CDS 76833036 76833998 76833036 ID=cds.MS.gene06388.t1;Parent=MS.gene06388.t1
chr3.1 exon 76834082 76834231 76834082 ID=MS.gene06388.t1.exon2;Parent=MS.gene06388.t1
chr3.1 CDS 76834082 76834231 76834082 ID=cds.MS.gene06388.t1;Parent=MS.gene06388.t1
chr3.1 exon 76835079 76835349 76835079 ID=MS.gene06388.t1.exon3;Parent=MS.gene06388.t1
chr3.1 CDS 76835079 76835349 76835079 ID=cds.MS.gene06388.t1;Parent=MS.gene06388.t1
chr3.1 exon 76835740 76835850 76835740 ID=MS.gene06388.t1.exon4;Parent=MS.gene06388.t1
chr3.1 CDS 76835740 76835850 76835740 ID=cds.MS.gene06388.t1;Parent=MS.gene06388.t1
chr3.1 exon 76835934 76836108 76835934 ID=MS.gene06388.t1.exon5;Parent=MS.gene06388.t1
chr3.1 CDS 76835934 76836108 76835934 ID=cds.MS.gene06388.t1;Parent=MS.gene06388.t1
chr3.1 exon 76836511 76836783 76836511 ID=MS.gene06388.t1.exon6;Parent=MS.gene06388.t1
chr3.1 CDS 76836511 76836783 76836511 ID=cds.MS.gene06388.t1;Parent=MS.gene06388.t1
chr3.1 exon 76836880 76837074 76836880 ID=MS.gene06388.t1.exon7;Parent=MS.gene06388.t1
chr3.1 CDS 76836880 76837074 76836880 ID=cds.MS.gene06388.t1;Parent=MS.gene06388.t1
chr3.1 exon 76837160 76837388 76837160 ID=MS.gene06388.t1.exon8;Parent=MS.gene06388.t1
chr3.1 CDS 76837160 76837388 76837160 ID=cds.MS.gene06388.t1;Parent=MS.gene06388.t1
Gene Sequence

>MS.gene06388

ATGGCTTTAGGGAAATATTCTAGAGTAGACGGTAGAAGATCGTCGAGTTACTGTTCAACAGTGACTATAGTTGTGTTTGTTGCTCTAGCCTTGATTGGGGTTTGGATGATGACATCATCTTCTGTAGTTCCCGTGCAAAAGGTCGTGCCTCGGGAGAGTAAAAATGAGGTGAAGGAACAGACTGAGGTGAGGGAACAGGTGAGTGAAACTGATAATAGCAATGCTCGGCAGTTTGAAGATAATCCTGGTGATTTGCCTGAGGATGCGACCAAGGGGGATAGCAATGTCAGCTCCGAAGAGAAGTCGGAGGAAAATTCCACGGAGAAGTCTTCTGAAGATACGAAGACAGAAGACGAGGGTAAGAAAACAGAAGATGAAGGCTCCAATACAGAAAATAACAAAGACAGCGAAGAGGCGTCTACTAAGGAATCTGAATCTGATGAGAGTGAAAAGAAAGATGAATCAGAGGAGAACAACAAGTCTGATTCAGATGAAAGTGAAAAGAAATCTAGTGACTCGAATGAAACAACAGATAGTAATGTAGAGGAGAAGGTGGAACAAAGCGAGAACAAAGAATCTGATGAAAACGCTGGTGAGAAGAATACAGATGATAATGCCAAAGACCAGAGTTCAAATGAGGTATTCCCTTCCGGGGCTCAGTCTGAGCTTCTAAATGAAACTACGACACAAACTGGATCGTTTTCTACACAGGCAGCAGAGTCAAAGAATGAAAAGGAGATTCAAGAGTCCTCCAAGACTGGGTACAATTGGAAAGTTTGTAATGTTACCGCTGGCCCCGACTTTATCCCATGCCTTGACAACTGGAAAGCGATTAGGAGTCTTCGGAGCACTAAACACTATGAACATCGAGAAAGACACTGTCCTGAAGAACCTCCCACCTGCCTTGTCTCTCTTCCTGAAGGATATAAGCGCTCTATTGAGTGGCCTAAAAGCAGAGAGAAGGTTAAAATCAAATCTTGTCAATTGTCATTTCATTCTCTGGTTGTTTTTCTTTTTCCTAAAATTATATGTTATTTCTCCTGCAGATATGGTATTACAATGTTCCACACACTAAGCTTGCTGAAGTTAAGGGGCATCAAAATTGGGTGAAAGTTACGGGTGAGTATCTTACTTTTCCTGGTGGTGGAACCCAATTCAAGCATGGGGCACTTCATTACATTGACTTTATACAAGAGGTATGCATTTTGTTTGGATTAAATTTGGCATTTATTTGCTGCTTTTGTATTTAATTTTTCCAAAAATTTCTGTTTAACTTGTATATTATCTGAACTTTCAAGATCAATATATAATCAATGTAATCCCTAACTTGTCAAGTTGTCACACCCTTTTAAGAAAAAGAAAAAATCACCGCACCAGTATAGCCTTTAAAAATCTGTTAATATTGGAATGAAAAAAAATATTATGGCAATTCAACTCTATAGAGCGTAAAAATCTTGTTGATCTAAGCTTGTGGGAAGCAGCTCATAGGTAGCTTCTCGTCCAAGTTTCTCTTTATTATGATACCTGGAGTGAAGAAATTGTTTGTTGCTATCTCAACACAATTATGATTATTTTTCATGTTCTGCCACAGTTTAGACCGAACTGGTAGGAATGGCACATATGATCTGCATTGACTAATAAACAAATAGTAAATGAGATACAAAAATTGCAGTTCAACTATAGTATTGAATTTGAGTAGACCTGAAAGTTCTTCAATGACTTTCTGTACCAACTGCCAATAGAGGAAATTAAGATACGTTGGATGATAAAATCCCCCCTCCTCCCCGTTTACGCACAACAGGACAAATCCTAATACATATGAACTGCACATCTGTGAGGCACTGGATGACAACCAAAATTTACCATGATATTGATTTACCTTCATTAAATGATCTTCTACAAACCAGCTTCTTTATCAGAAGAAGTTATGTGAAATCTACATACTTTCATCTTAAACTTTTTTTAGATTTCTAGAATTTACAATGTTTACTCGATGTGGACGAGCAGTCAAGCATTTTACCTAATAGAGCTTTGATGATGCAGACTCTGCCTGACATTGCTTGGGGCAAACGCACACGTGTTATACTAGATGTTGGATGTGGAGTTGCCAGCTTCGGAGGCTTTCTCTTTGATAGAGATGTACTTGCAATGTCACTTGCACCAAAGGATGAACATGAAGCTCAGGTTCAATTTGCTCTTGAGAGGGGGATTCCTGCTATATCTGCTGTAATGGGCACAAAGAGGCTTCCCTTCCCTGGGAGAGTATTTGATGCAGTCCATTGTGCACGTTGTAGAGTTCCATGGCACATTGAAGGTATTCAGATTACACAGATTCTGTTTACATGATTAGATTAGTTTATTATATAGAATTTTGAATCGTATTCATTTAGGCATTTATCAATCTTAACTTGGTATATAAATTGTAGCGACAGACAACATATAATACATGTAAATGTCACTGGATTTTGTTTGTTATACAGCTATTTTGGTGGGGTGGGTATGTTGGATTATTTTACGTTATTCTTACTATCAAGATGAAGAGAAAAATGTGTGACGTTTGATGAAATCCATGTGTTTGAATTACACAGCAGAGACTCTACTATTTATATGCAATAATTATGAGAATCACCAATATCCTAGTTAACATGATTACTAGATTTGATTACCTTATTTACATGTAAACAAAAACAATTTACAACTGCAGGTGGTAAACTTCTTTTGGAGCTGAACAGAGTATTGCGGCCTGGTGGTTTTTTTGTATGGTCTGCGACTCCTATTTATCAGAAGCTTCCTGAAGATGTTGAAATATGGAATGGTAAATAATAACTAGTCATGTGTTCCTTTTTTGTGCATTTTAATGTAGGTTTTCAATCTTGACATTTATGAATTTGTTAACAGCGATGAAAGCATTAACAAAATCAATATGCTGGGAACTTGTTTCAATCAGCAAGGATCAAGTTAATGGAGTTGGTGTAGCCATATACAAGAAGCCACTATCCAATGATTGTTATGAGCAACGATCAAAGAATGAGCCTCCACTGTGTCAAAAATCTGATGATCCCAATGCAGCATGGTATTCCTTCCTTAACTGACATGGTGTTTTCTTAAGCAATAACAACAACCAAGCCTTATCCTACTAAGTGGGGTCGGCTATGTGGTTTTTTTAAAGCAAAAACCAAAATAGAAATTTATATTTTGCCGAGTTAATTGCTGAATTAGTCTTTGATTGCAGTCGCTTACACTGAGAAAACTTTAAAACAGAGCTGATAGTTGCTTCTTACCCCCTTCCTGTCTTGGAAAAGTGAGGAACATTTGTATAAAACAAGTATAAAAATAAAACAGGGCTTTTTATTTGGCTGGAGACTTAGATGTTTCTGCTGCAAATGAACAATTATTGTACTTCGAGATTTATCTGCGAAATTTTCAATTACACTAGTATTATAATGTTCATGCAGTCTAATCTCTGATGTGACAGGTATATTAAATTGCAAGCATGCATACACAAAGTGCCAGTTAGTTCAAGTGAACGCGGGTCACAGTGGCCAGAAAAGTGGCCAGCCAGGCTGACCAATGTACCATATTGGTTGTCAAGTTCCCAAGTTGGAGTCTATGGTAAGCCGGCCCCTGAAGATTTTGCTGCTGATAATAAACACTGGAAACGTGTAGTGTCCAAGTCTTATCTAAACGGATTGGGAATTCAGTGGTCAAATGTACGGAATGTCATGGATATGAACTCAATCTATGGAGGGTGAGCAAAAATCATTGTTTCAAATATTATTGTGAACTATTATATACTTACTAATATGTCCTTCCGTGTTTGACATCTACCGATTGTGGCTTCCAGATTTGCTGCAGCTTTGAAAGATTTGAATATTTGGGTCATGAATGTAGTTTCAATAGACTCCGCAGATACCCTTCCCATTATTTATGAACGGGGTCTTTTTGGTATATATCATGATTGGTGTGAATCATTTAGCACCTATCCCAGGACGTATGATCTCCTCCATGCAGATCATCTCTTTTCAAAGGTTCAGAAAAGGTGAAAATAATTATTTCATTCCCACATTAATAACCAGCAAACTTTTTATTATGGTTTTGCTAATGCTTATTTGGTGGTCACGCAGATGCAATCTAGCTTCTCTGGTAGCTGAGGTTGATCGGATTCTCAGGCCTGAAGGAAAGCTTATTGTCCGGGACACTGTTGAGGTCATTAACGAGCTTGAGAGCATGGTAAAGTCCATGCAGTGGGAGGTTCGCATGACCTACTCCAAGGATAAGGAGGGTTTGTTATGTGTCCAGAAGTCCACCTGGCGGCCTAAGGAGACGGAGACACTCAAGTATGCTATTGTTTAA
Protein sequence

>MS.gene06388.t1

MALGKYSRVDGRRSSSYCSTVTIVVFVALALIGVWMMTSSSVVPVQKVVPRESKNEVKEQTEVREQVSETDNSNARQFEDNPGDLPEDATKGDSNVSSEEKSEENSTEKSSEDTKTEDEGKKTEDEGSNTENNKDSEEASTKESESDESEKKDESEENNKSDSDESEKKSSDSNETTDSNVEEKVEQSENKESDENAGEKNTDDNAKDQSSNEVFPSGAQSELLNETTTQTGSFSTQAAESKNEKEIQESSKTGYNWKVCNVTAGPDFIPCLDNWKAIRSLRSTKHYEHRERHCPEEPPTCLVSLPEGYKRSIEWPKSREKIWYYNVPHTKLAEVKGHQNWVKVTGEYLTFPGGGTQFKHGALHYIDFIQETLPDIAWGKRTRVILDVGCGVASFGGFLFDRDVLAMSLAPKDEHEAQVQFALERGIPAISAVMGTKRLPFPGRVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFVWSATPIYQKLPEDVEIWNAMKALTKSICWELVSISKDQVNGVGVAIYKKPLSNDCYEQRSKNEPPLCQKSDDPNAAWYIKLQACIHKVPVSSSERGSQWPEKWPARLTNVPYWLSSSQVGVYGKPAPEDFAADNKHWKRVVSKSYLNGLGIQWSNVRNVMDMNSIYGGFAAALKDLNIWVMNVVSIDSADTLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADHLFSKVQKRCNLASLVAEVDRILRPEGKLIVRDTVEVINELESMVKSMQWEVRMTYSKDKEGLLCVQKSTWRPKETETLKYAIV