AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene06389

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06389.t1 MTR_3g096480 98.606 789 10 1 1 788 1 789 0.0 1607
MS.gene06389.t1 MTR_8g093880 73.082 821 184 8 1 787 1 818 0.0 1249
MS.gene06389.t1 MTR_3g088790 57.393 798 285 12 1 787 1 754 0.0 944
MS.gene06389.t1 MTR_5g021100 54.900 847 302 11 1 778 1 836 0.0 932
MS.gene06389.t1 MTR_8g076650 55.951 731 280 8 75 777 176 892 0.0 847
MS.gene06389.t1 MTR_5g083150 53.631 537 238 3 241 777 75 600 0.0 637
MS.gene06389.t1 MTR_3g071530 54.876 523 221 5 256 778 142 649 0.0 610
MS.gene06389.t1 MTR_1g022255 50.851 529 238 5 251 777 193 701 0.0 594
MS.gene06389.t1 MTR_1g029730 49.109 505 239 10 257 754 141 634 1.32e-169 504
MS.gene06389.t1 MTR_5g080720 45.389 553 276 10 220 758 79 619 3.14e-169 503
MS.gene06389.t1 MTR_3g068990 47.686 497 244 8 267 758 162 647 4.34e-168 501
MS.gene06389.t1 MTR_5g080720 45.898 512 251 10 220 717 79 578 3.77e-153 459
MS.gene06389.t1 MTR_1g442840 45.941 542 253 16 267 786 101 624 3.31e-151 456
MS.gene06389.t1 MTR_1g442840 47.002 517 240 13 288 786 11 511 9.77e-150 448
MS.gene06389.t1 MTR_1g069785 45.880 534 255 14 267 780 71 590 8.08e-149 449
MS.gene06389.t1 MTR_8g432620 42.830 523 266 12 267 775 97 600 7.86e-144 436
MS.gene06389.t1 MTR_1g075900 43.561 528 266 11 267 775 100 614 4.12e-142 432
MS.gene06389.t1 MTR_7g076150 40.917 545 286 12 247 776 65 588 5.67e-141 428
MS.gene06389.t1 MTR_8g100075 42.056 535 276 14 260 775 101 620 6.42e-138 422
MS.gene06389.t1 MTR_0019s0120 42.264 530 268 15 267 775 114 626 5.98e-137 419
MS.gene06389.t1 MTR_5g026930 42.509 534 268 14 267 780 81 595 2.42e-136 417
MS.gene06389.t1 MTR_8g071280 41.856 528 270 12 267 775 79 588 3.81e-136 416
MS.gene06389.t1 MTR_1g101370 41.519 566 291 18 233 775 69 617 1.41e-135 416
MS.gene06389.t1 MTR_7g006060 44.856 486 244 8 285 755 68 544 1.73e-135 414
MS.gene06389.t1 MTR_4g098890 45.113 532 257 15 247 763 76 587 1.77e-132 431
MS.gene06389.t1 MTR_8g055840 42.077 549 278 18 246 775 73 600 3.56e-132 406
MS.gene06389.t1 MTR_8g432680 40.631 539 280 16 267 781 114 636 2.65e-131 405
MS.gene06389.t1 MTR_1g022255 46.366 399 193 4 251 648 193 571 4.62e-131 402
MS.gene06389.t1 MTR_7g076170 40.426 564 292 19 243 781 87 631 2.20e-129 400
MS.gene06389.t1 MTR_5g040360 41.935 527 268 14 267 775 93 599 2.23e-128 396
MS.gene06389.t1 MTR_3g040370 41.121 535 272 15 267 782 94 604 6.26e-127 392
MS.gene06389.t1 MTR_7g076150 41.685 463 239 9 327 776 1 445 8.47e-124 379
MS.gene06389.t1 MTR_1g051055 39.700 534 272 14 267 775 95 603 1.15e-116 366
MS.gene06389.t1 MTR_5g026930 42.694 438 215 13 267 687 81 499 1.26e-104 331
MS.gene06389.t1 MTR_0019s0120 41.781 438 221 14 267 687 114 534 5.72e-104 330
MS.gene06389.t1 MTR_5g064080 33.275 571 310 18 246 776 132 671 1.82e-91 301
MS.gene06389.t1 MTR_3g074780 34.286 525 286 17 291 776 185 689 8.18e-86 287
MS.gene06389.t1 MTR_4g083030 34.023 532 295 19 267 769 95 599 1.73e-79 267
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06389.t1 AT5G64030 64.671 835 240 9 1 787 1 828 0.0 1106
MS.gene06389.t1 AT1G29470 64.512 789 260 9 1 788 1 770 0.0 1039
MS.gene06389.t1 AT1G29470 64.512 789 260 9 1 788 1 770 0.0 1039
MS.gene06389.t1 AT2G34300 61.181 796 275 9 1 788 1 770 0.0 1009
MS.gene06389.t1 AT2G34300 61.181 796 275 9 1 788 1 770 0.0 1009
MS.gene06389.t1 AT2G34300 61.181 796 275 9 1 788 1 770 0.0 1009
MS.gene06389.t1 AT3G51070 62.446 695 240 4 94 781 215 895 0.0 939
MS.gene06389.t1 AT3G51070 34.659 176 90 6 1 154 1 173 8.42e-17 85.5
MS.gene06389.t1 AT3G51070 63.158 627 210 4 94 713 215 827 0.0 856
MS.gene06389.t1 AT3G51070 34.659 176 90 6 1 154 1 173 9.43e-17 85.5
MS.gene06389.t1 AT2G40280 50.171 584 265 8 202 781 26 587 0.0 616
MS.gene06389.t1 AT3G56080 53.818 537 227 7 242 777 94 610 0.0 608
MS.gene06389.t1 AT1G19430 41.447 760 380 13 21 777 27 724 0.0 600
MS.gene06389.t1 AT1G19430 41.447 760 380 13 21 777 27 724 0.0 600
MS.gene06389.t1 AT3G56080 55.180 473 195 6 242 713 94 550 0.0 555
MS.gene06389.t1 AT1G77260 44.784 556 278 10 216 754 88 631 5.15e-171 508
MS.gene06389.t1 AT5G06050 45.796 559 266 15 223 758 99 643 1.11e-170 508
MS.gene06389.t1 AT2G39750 48.089 497 242 9 267 758 186 671 7.59e-169 504
MS.gene06389.t1 AT3G23300 44.195 534 263 13 267 780 88 606 3.01e-146 442
MS.gene06389.t1 AT3G23300 44.195 534 263 13 267 780 88 606 3.01e-146 442
MS.gene06389.t1 AT4G14360 45.527 503 245 12 267 755 85 572 3.39e-146 442
MS.gene06389.t1 AT4G14360 45.527 503 245 12 267 755 85 572 3.39e-146 442
MS.gene06389.t1 AT4G00740 41.954 522 270 10 269 776 92 594 3.03e-143 434
MS.gene06389.t1 AT4G00740 41.954 522 270 10 269 776 92 594 3.03e-143 434
MS.gene06389.t1 AT1G04430 45.365 507 240 14 267 755 93 580 8.21e-143 434
MS.gene06389.t1 AT1G04430 45.365 507 240 14 267 755 93 580 8.21e-143 434
MS.gene06389.t1 AT1G04430 45.365 507 240 14 267 755 93 580 8.21e-143 434
MS.gene06389.t1 AT1G31850 42.617 535 258 15 267 775 85 596 7.24e-141 429
MS.gene06389.t1 AT1G31850 42.617 535 258 15 267 775 85 596 7.24e-141 429
MS.gene06389.t1 AT1G31850 42.617 535 258 15 267 775 85 596 7.24e-141 429
MS.gene06389.t1 AT1G31850 42.617 535 258 15 267 775 85 596 7.24e-141 429
MS.gene06389.t1 AT4G10440 41.187 556 292 14 240 775 76 616 7.27e-141 429
MS.gene06389.t1 AT1G33170 41.547 556 291 13 240 775 93 634 2.86e-140 428
MS.gene06389.t1 AT4G19120 42.351 536 258 15 267 775 79 590 3.52e-138 421
MS.gene06389.t1 AT4G19120 42.351 536 258 15 267 775 79 590 3.52e-138 421
MS.gene06389.t1 AT5G14430 46.139 505 239 13 267 755 89 576 7.08e-137 419
MS.gene06389.t1 AT1G19430 36.926 631 334 12 21 649 27 595 1.17e-135 415
MS.gene06389.t1 AT1G26850 42.724 536 272 15 267 782 95 615 1.53e-135 415
MS.gene06389.t1 AT1G26850 42.724 536 272 15 267 782 95 615 1.53e-135 415
MS.gene06389.t1 AT5G14430 45.545 505 242 13 267 755 89 576 1.79e-134 412
MS.gene06389.t1 AT2G45750 41.882 542 262 19 270 787 99 611 4.00e-132 407
MS.gene06389.t1 AT4G00750 41.051 514 260 18 289 775 125 622 2.08e-126 392
MS.gene06389.t1 AT4G18030 41.590 541 274 15 256 775 84 603 3.95e-126 391
MS.gene06389.t1 AT2G43200 42.188 512 264 14 267 763 100 594 5.58e-126 390
MS.gene06389.t1 AT2G43200 42.188 512 264 14 267 763 100 594 5.58e-126 390
MS.gene06389.t1 AT5G04060 41.935 527 267 12 267 775 92 597 1.32e-125 389
MS.gene06389.t1 AT3G10200 41.176 527 273 14 267 775 81 588 1.65e-123 383
MS.gene06389.t1 AT3G10200 41.247 497 258 13 267 748 81 558 6.77e-117 366
MS.gene06389.t1 AT4G19120 42.247 445 209 14 267 687 79 499 1.59e-107 338
MS.gene06389.t1 AT1G26850 41.204 432 216 14 267 683 95 503 1.70e-92 299
MS.gene06389.t1 AT1G78240 31.579 570 322 19 246 772 132 676 1.77e-84 283
MS.gene06389.t1 AT1G78240 31.579 570 322 19 246 772 132 676 1.77e-84 283
MS.gene06389.t1 AT1G13860 33.948 542 289 19 267 772 90 598 1.26e-78 265
MS.gene06389.t1 AT1G13860 33.948 542 289 19 267 772 90 598 1.26e-78 265
MS.gene06389.t1 AT1G13860 33.948 542 289 19 267 772 90 598 1.26e-78 265
MS.gene06389.t1 AT1G13860 33.948 542 289 19 267 772 90 598 1.26e-78 265
MS.gene06389.t1 AT1G13860 36.779 416 218 14 383 772 46 442 6.25e-74 248
MS.gene06389.t1 AT2G03480 34.221 526 294 17 268 772 96 590 1.35e-73 251
MS.gene06389.t1 AT2G03480 33.647 532 300 17 268 772 96 601 5.47e-73 250
MS.gene06389.t1 AT2G03480 32.166 314 184 10 268 565 96 396 3.74e-33 133

Find 214 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGAAAGATTTGAATATT+TGG 0.164392 3.2:+80537262 MS.gene06389:CDS
TGCAGGTGGTAAACTTCTTT+TGG 0.230174 3.2:+80536106 MS.gene06389:intron
CAATCCGAAGACATGGCTTT+AGG 0.255854 3.2:+80533395 None:intergenic
CTCATTTGAACTCTGGTCTT+TGG 0.275650 3.2:-80534023 None:intergenic
GGATAGTGGCTTCTTGTATA+TGG 0.279107 3.2:-80536383 None:intergenic
AAGACCCCGTTCATAAATAA+TGG 0.282831 3.2:-80537325 None:intergenic
CTCTAGCCTTGATTGGGGTT+TGG 0.283882 3.2:+80533489 MS.gene06389:CDS
TCAGGAAGCTTCTGATAAAT+AGG 0.293202 3.2:-80536179 None:intergenic
TAGGCCGCCAGGTGGACTTC+TGG 0.299464 3.2:-80537702 None:intergenic
TTCCATATTTCAACATCTTC+AGG 0.299746 3.2:-80536197 None:intergenic
TTATCAGCAGCAAAATCTTC+AGG 0.304087 3.2:-80537030 None:intergenic
ATCAGCAAGGATCAAGTTAA+TGG 0.304469 3.2:+80536349 MS.gene06389:CDS
TTTGTTGCTCTAGCCTTGAT+TGG 0.306385 3.2:+80533482 MS.gene06389:CDS
AAGTTAAGGGGCATCAAAAT+TGG 0.309838 3.2:+80534490 MS.gene06389:CDS
GACTCTGCCTGACATTGCTT+GGG 0.309960 3.2:+80535449 MS.gene06389:intron
AGGCAGGTGGGAGGTTCTTC+AGG 0.312570 3.2:-80534289 None:intergenic
TGAGCTTCATGTTCATCCTT+TGG 0.318842 3.2:-80535567 None:intergenic
TTATCCCATGCCTTGACAAC+TGG 0.320818 3.2:+80534209 MS.gene06389:CDS
TTTGAAAGATTTGAATATTT+GGG 0.321547 3.2:+80537263 MS.gene06389:CDS
CACTAAGCTTGCTGAAGTTA+AGG 0.329223 3.2:+80534476 MS.gene06389:CDS
AATCCGAAGACATGGCTTTA+GGG 0.343883 3.2:+80533396 None:intergenic
TTCCTGAAGATGTTGAAATA+TGG 0.348064 3.2:+80536195 MS.gene06389:CDS
CCTTCCCATTATTTATGAAC+GGG 0.357509 3.2:+80537320 MS.gene06389:CDS
TCAAATGAGGTATTCCCTTC+CGG 0.367877 3.2:+80534037 MS.gene06389:CDS
TGGGAACTTGACAACCAATA+TGG 0.368562 3.2:-80536982 None:intergenic
CAAATGAGGTATTCCCTTCC+GGG 0.376544 3.2:+80534038 MS.gene06389:CDS
ATGGATATGAACTCAATCTA+TGG 0.377899 3.2:+80537129 MS.gene06389:CDS
AATGAAACTACGACACAAAC+TGG 0.384495 3.2:+80534079 MS.gene06389:CDS
AGTTCCCAAGTTGGAGTCTA+TGG 0.386840 3.2:+80536997 MS.gene06389:CDS
TTGTTGCTCTAGCCTTGATT+GGG 0.386986 3.2:+80533483 MS.gene06389:CDS
ATAGAGCGCTTATATCCTTC+AGG 0.387610 3.2:-80534322 None:intergenic
AGACTCTGCCTGACATTGCT+TGG 0.390574 3.2:+80535448 MS.gene06389:intron
CCGCGTTCACTTGAACTAAC+TGG 0.395097 3.2:-80536916 None:intergenic
TCAAAATTGGGTGAAAGTTA+CGG 0.401724 3.2:+80534503 MS.gene06389:CDS
CCTCCAAGACTGGGTACAAT+TGG 0.405008 3.2:+80534155 MS.gene06389:CDS
ACAAAGAGGCTTCCCTTCCC+TGG 0.407202 3.2:+80535642 MS.gene06389:CDS
CAAAATTGGGTGAAAGTTAC+GGG 0.407429 3.2:+80534504 MS.gene06389:CDS
GAAGTGCCCCATGCTTGAAT+TGG 0.410323 3.2:-80534557 None:intergenic
CTCCGTCTCCTTAGGCCGCC+AGG 0.412774 3.2:-80537713 None:intergenic
ATTCAAGAGTCCTCCAAGAC+TGG 0.418254 3.2:+80534145 MS.gene06389:CDS
CAAGTCTTATCTAAACGGAT+TGG 0.419452 3.2:+80537077 MS.gene06389:CDS
CCTGCTATATCTGCTGTAAT+GGG 0.421591 3.2:+80535618 MS.gene06389:CDS
TCCTGCTATATCTGCTGTAA+TGG 0.421692 3.2:+80535617 MS.gene06389:CDS
CATTAACAAAATCAATATGC+TGG 0.424608 3.2:+80536314 MS.gene06389:CDS
GGTACATTGGTCAGCCTGGC+TGG 0.424736 3.2:-80536961 None:intergenic
GGCTGACCAATGTACCATAT+TGG 0.427892 3.2:+80536968 MS.gene06389:CDS
AGACCCCGTTCATAAATAAT+GGG 0.428891 3.2:-80537324 None:intergenic
CAGATGCAATCTAGCTTCTC+TGG 0.430244 3.2:+80537528 MS.gene06389:intron
ACTAAGCTTGCTGAAGTTAA+GGG 0.433369 3.2:+80534477 MS.gene06389:CDS
TTGACAACTGGAAAGCGATT+AGG 0.436526 3.2:+80534221 MS.gene06389:CDS
TTTCCAATTGTACCCAGTCT+TGG 0.437033 3.2:-80534158 None:intergenic
TCATAACAATCATTGGATAG+TGG 0.441820 3.2:-80536397 None:intergenic
TCGTTGCTCATAACAATCAT+TGG 0.446283 3.2:-80536404 None:intergenic
CTGAGGTTGATCGGATTCTC+AGG 0.448079 3.2:+80537554 MS.gene06389:CDS
GGCCAGAAAAGTGGCCAGCC+AGG 0.448570 3.2:+80536947 MS.gene06389:CDS
GTGTCCAAGTCTTATCTAAA+CGG 0.458820 3.2:+80537072 MS.gene06389:CDS
TCAAGGCATGGGATAAAGTC+GGG 0.458938 3.2:-80534202 None:intergenic
CAATCCGTTTAGATAAGACT+TGG 0.459235 3.2:-80537076 None:intergenic
GAAGGAATACCATGCTGCAT+TGG 0.460905 3.2:-80536467 None:intergenic
CTCTGGTAGCTGAGGTTGAT+CGG 0.463097 3.2:+80537545 MS.gene06389:CDS
TTCTGTAGTTCCCGTGCAAA+AGG 0.463204 3.2:+80533526 MS.gene06389:CDS
TTGAGTGTCTCCGTCTCCTT+AGG 0.465804 3.2:-80537721 None:intergenic
AAGGAATACCATGCTGCATT+GGG 0.465896 3.2:-80536466 None:intergenic
AGGTTCAATTTGCTCTTGAG+AGG 0.466968 3.2:+80535589 MS.gene06389:CDS
AAGTCTTATCTAAACGGATT+GGG 0.468240 3.2:+80537078 MS.gene06389:CDS
CGTTTGCCCCAAGCAATGTC+AGG 0.469178 3.2:-80535456 None:intergenic
CCAATTGTACCCAGTCTTGG+AGG 0.469573 3.2:-80534155 None:intergenic
AAAGAGAAAGCCTCCGAAGC+TGG 0.471336 3.2:-80535514 None:intergenic
CGTGCAAAAGGTCGTGCCTC+GGG 0.471678 3.2:+80533538 MS.gene06389:CDS
TGAAAAGAAAGATGAATCAG+AGG 0.472280 3.2:+80533853 MS.gene06389:CDS
ACAGACTGAGGTGAGGGAAC+AGG 0.474299 3.2:+80533583 MS.gene06389:CDS
CAGCGAAGAGGCGTCTACTA+AGG 0.476422 3.2:+80533811 MS.gene06389:CDS
CGGACAATAAGCTTTCCTTC+AGG 0.478801 3.2:-80537577 None:intergenic
GGATGTGGAGTTGCCAGCTT+CGG 0.480928 3.2:+80535501 MS.gene06389:CDS
AGTTAAGGGGCATCAAAATT+GGG 0.484810 3.2:+80534491 MS.gene06389:CDS
GGAAAGCGATTAGGAGTCTT+CGG 0.484828 3.2:+80534230 MS.gene06389:CDS
CCGTGCAAAAGGTCGTGCCT+CGG 0.487700 3.2:+80533537 MS.gene06389:CDS
CCCTTCCCATTATTTATGAA+CGG 0.488962 3.2:+80537319 MS.gene06389:CDS
CTGAAGGAAAGCTTATTGTC+CGG 0.497261 3.2:+80537578 MS.gene06389:CDS
TAACAAACCCTCCTTATCCT+TGG 0.499118 3.2:-80537674 None:intergenic
AGAGTTCCATGGCACATTGA+AGG 0.500328 3.2:+80535699 MS.gene06389:CDS
ATCAAATACTCTCCCAGGGA+AGG 0.510333 3.2:-80535655 None:intergenic
CATGACCTACTCCAAGGATA+AGG 0.511195 3.2:+80537663 MS.gene06389:CDS
GAAGTCCACCTGGCGGCCTA+AGG 0.514851 3.2:+80537705 MS.gene06389:CDS
AAGTGCCCCATGCTTGAATT+GGG 0.517462 3.2:-80534556 None:intergenic
TTGAATTGGGTTCCACCACC+AGG 0.519299 3.2:-80534543 None:intergenic
AGCAGAGTCAAAGAATGAAA+AGG 0.519819 3.2:+80534120 MS.gene06389:CDS
GCTTTCCAGTTGTCAAGGCA+TGG 0.520419 3.2:-80534214 None:intergenic
AGATAGTAATGTAGAGGAGA+AGG 0.521421 3.2:+80533937 MS.gene06389:CDS
AAAGGATGAACATGAAGCTC+AGG 0.523572 3.2:+80535569 MS.gene06389:CDS
TGCAATGTCACTTGCACCAA+AGG 0.524307 3.2:+80535551 MS.gene06389:CDS
TATCAGCAGCAAAATCTTCA+GGG 0.525199 3.2:-80537029 None:intergenic
ATGGAGGAGATCATACGTCC+TGG 0.525368 3.2:-80537391 None:intergenic
TTCAATTTGCTCTTGAGAGG+GGG 0.525841 3.2:+80535592 MS.gene06389:CDS
CACCTGGCGGCCTAAGGAGA+CGG 0.529728 3.2:+80537711 MS.gene06389:CDS
GTGGAACCCAATTCAAGCAT+GGG 0.531941 3.2:+80534550 MS.gene06389:CDS
GGTTCAATTTGCTCTTGAGA+GGG 0.532634 3.2:+80535590 MS.gene06389:CDS
TGCCTTGTCTCTCTTCCTGA+AGG 0.535020 3.2:+80534307 MS.gene06389:CDS
AAGGATCAAGTTAATGGAGT+TGG 0.537672 3.2:+80536355 MS.gene06389:CDS
GCAGCAAAATCTTCAGGGGC+CGG 0.538266 3.2:-80537024 None:intergenic
CAAAGAGGCTTCCCTTCCCT+GGG 0.538740 3.2:+80535643 MS.gene06389:CDS
CATCATCCAAACCCCAATCA+AGG 0.540492 3.2:-80533495 None:intergenic
ACTGCATCAAATACTCTCCC+AGG 0.541601 3.2:-80535660 None:intergenic
CGGCAGTTTGAAGATAATCC+TGG 0.544215 3.2:+80533632 MS.gene06389:CDS
CATTAACGAGCTTGAGAGCA+TGG 0.545161 3.2:+80537615 MS.gene06389:CDS
ATATGGTACATTGGTCAGCC+TGG 0.547368 3.2:-80536965 None:intergenic
TGAAGGAAAGCTTATTGTCC+GGG 0.549044 3.2:+80537579 MS.gene06389:CDS
TGGGATAAAGTCGGGGCCAG+CGG 0.549843 3.2:-80534194 None:intergenic
TTACATTGACTTTATACAAG+AGG 0.550306 3.2:+80534581 MS.gene06389:CDS
GGGAAATATTCTAGAGTAGA+CGG 0.551732 3.2:+80533416 MS.gene06389:CDS
ATTAACAAAATCAATATGCT+GGG 0.551786 3.2:+80536315 MS.gene06389:CDS
GAGATCATACGTCCTGGGAT+AGG 0.553125 3.2:-80537385 None:intergenic
TTGCCTGAGGATGCGACCAA+GGG 0.553259 3.2:+80533659 MS.gene06389:CDS
TGGTTGTCAAGTTCCCAAGT+TGG 0.553335 3.2:+80536988 MS.gene06389:CDS
GGAATACCTCATTTGAACTC+TGG 0.553898 3.2:-80534030 None:intergenic
CTTTCCAGTTGTCAAGGCAT+GGG 0.554013 3.2:-80534213 None:intergenic
GGTCACAGTGGCCAGAAAAG+TGG 0.554071 3.2:+80536938 MS.gene06389:CDS
AAAGTTTGTAATGTTACCGC+TGG 0.554252 3.2:+80534178 MS.gene06389:CDS
TGTGGAGTTGCCAGCTTCGG+AGG 0.557116 3.2:+80535504 MS.gene06389:CDS
CCCATTACAGCAGATATAGC+AGG 0.558260 3.2:-80535618 None:intergenic
GAATTCAGTGGTCAAATGTA+CGG 0.565252 3.2:+80537100 MS.gene06389:CDS
CCCGTTCATAAATAATGGGA+AGG 0.566248 3.2:-80537320 None:intergenic
AGCTCAGACTGAGCCCCGGA+AGG 0.566755 3.2:-80534052 None:intergenic
GTCAAGGCATGGGATAAAGT+CGG 0.567476 3.2:-80534203 None:intergenic
GATCGGATTCTCAGGCCTGA+AGG 0.569364 3.2:+80537562 MS.gene06389:CDS
CTGAACAGAGTATTGCGGCC+TGG 0.570629 3.2:+80536131 MS.gene06389:CDS
AGTTGGAGTCTATGGTAAGC+CGG 0.573432 3.2:+80537005 MS.gene06389:CDS
GGTGGAACCCAATTCAAGCA+TGG 0.579009 3.2:+80534549 MS.gene06389:CDS
GGTAAGAAAACAGAAGATGA+AGG 0.579076 3.2:+80533764 MS.gene06389:CDS
TCTAGCTTCTCTGGTAGCTG+AGG 0.579746 3.2:+80537537 MS.gene06389:CDS
TAATCGCTTTCCAGTTGTCA+AGG 0.579902 3.2:-80534219 None:intergenic
TAGTAATGTAGAGGAGAAGG+TGG 0.580767 3.2:+80533940 MS.gene06389:CDS
CATGCGAACCTCCCACTGCA+TGG 0.581028 3.2:-80537644 None:intergenic
TCAAATACTCTCCCAGGGAA+GGG 0.581519 3.2:-80535654 None:intergenic
GCATCCTCAGGCAAATCACC+AGG 0.581534 3.2:-80533650 None:intergenic
AGGAAGAGAGACAAGGCAGG+TGG 0.585497 3.2:-80534302 None:intergenic
TGAATACCTTCAATGTGCCA+TGG 0.585774 3.2:-80535705 None:intergenic
TATTGTCCGGGACACTGTTG+AGG 0.586039 3.2:+80537591 MS.gene06389:CDS
CTTCCCATTATTTATGAACG+GGG 0.587916 3.2:+80537321 MS.gene06389:CDS
CTTACCATAGACTCCAACTT+GGG 0.588345 3.2:-80537001 None:intergenic
TGACAACCAATATGGTACAT+TGG 0.589602 3.2:-80536974 None:intergenic
CAAAGACCAGAGTTCAAATG+AGG 0.590021 3.2:+80534024 MS.gene06389:CDS
GTTATACTAGATGTTGGATG+TGG 0.591044 3.2:+80535486 MS.gene06389:CDS
GACCTACTCCAAGGATAAGG+AGG 0.591238 3.2:+80537666 MS.gene06389:CDS
TTCAAGAGTCCTCCAAGACT+GGG 0.592523 3.2:+80534146 MS.gene06389:CDS
GATATGAACTCAATCTATGG+AGG 0.592603 3.2:+80537132 MS.gene06389:CDS
GCTCAGACTGAGCCCCGGAA+GGG 0.594249 3.2:-80534051 None:intergenic
TGGAGGAGATCATACGTCCT+GGG 0.597705 3.2:-80537390 None:intergenic
TTGCTGCTGATAATAAACAC+TGG 0.598168 3.2:+80537040 MS.gene06389:CDS
GTCAAATGTACGGAATGTCA+TGG 0.602207 3.2:+80537110 MS.gene06389:CDS
GTGCACGTTGTAGAGTTCCA+TGG 0.602530 3.2:+80535688 MS.gene06389:CDS
CTAAGCTTGCTGAAGTTAAG+GGG 0.603146 3.2:+80534478 MS.gene06389:CDS
GGAAGAGAGACAAGGCAGGT+GGG 0.603261 3.2:-80534301 None:intergenic
TAATGACCTCAACAGTGTCC+CGG 0.603316 3.2:-80537597 None:intergenic
TGTCAGCTCCGAAGAGAAGT+CGG 0.604687 3.2:+80533691 MS.gene06389:CDS
GCTTACCATAGACTCCAACT+TGG 0.604957 3.2:-80537002 None:intergenic
GAAGGAACAGACTGAGGTGA+GGG 0.605363 3.2:+80533577 MS.gene06389:CDS
GATATAAGCGCTCTATTGAG+TGG 0.606444 3.2:+80534329 MS.gene06389:CDS
TTTGCCTGAGGATGCGACCA+AGG 0.606923 3.2:+80533658 MS.gene06389:CDS
GTTCAATTTGCTCTTGAGAG+GGG 0.608000 3.2:+80535591 MS.gene06389:CDS
TTCAGGAAGAGAGACAAGGC+AGG 0.609303 3.2:-80534305 None:intergenic
GGAACTTGTTTCAATCAGCA+AGG 0.612001 3.2:+80536336 MS.gene06389:CDS
TGGAGCTGAACAGAGTATTG+CGG 0.613676 3.2:+80536126 MS.gene06389:CDS
AACAACAGATAGTAATGTAG+AGG 0.614483 3.2:+80533931 MS.gene06389:CDS
AATCATTTAGCACCTATCCC+AGG 0.615139 3.2:+80537373 MS.gene06389:CDS
AAATGAGGTATTCCCTTCCG+GGG 0.618479 3.2:+80534039 MS.gene06389:CDS
CCAGTTAGTTCAAGTGAACG+CGG 0.619426 3.2:+80536916 MS.gene06389:CDS
TGAAGGAACAGACTGAGGTG+AGG 0.620122 3.2:+80533576 MS.gene06389:CDS
TGTTGCTCTAGCCTTGATTG+GGG 0.623280 3.2:+80533484 MS.gene06389:CDS
GTGGCCTAAAAGCAGAGAGA+AGG 0.623669 3.2:+80534348 MS.gene06389:CDS
ACACGTGTTATACTAGATGT+TGG 0.623731 3.2:+80535480 MS.gene06389:CDS
CATGGTAAAGTCCATGCAGT+GGG 0.624917 3.2:+80537633 MS.gene06389:CDS
GAACTCTACAACGTGCACAA+TGG 0.628195 3.2:-80535683 None:intergenic
TTGAAAAGAGATGATCTGCA+TGG 0.628694 3.2:-80537410 None:intergenic
TAGAAGCTCAGACTGAGCCC+CGG 0.630651 3.2:-80534056 None:intergenic
ACTTCAGCAAGCTTAGTGTG+TGG 0.630986 3.2:-80534471 None:intergenic
CTGCTGTAATGGGCACAAAG+AGG 0.637182 3.2:+80535628 MS.gene06389:CDS
CTGCATCAAATACTCTCCCA+GGG 0.637623 3.2:-80535659 None:intergenic
GAAGTCGGAGGAAAATTCCA+CGG 0.637764 3.2:+80533706 MS.gene06389:CDS
ACTCTGCCTGACATTGCTTG+GGG 0.639154 3.2:+80535450 MS.gene06389:CDS
GAAGATGTTGAAATATGGAA+TGG 0.639298 3.2:+80536200 MS.gene06389:CDS
CCGTTCATAAATAATGGGAA+GGG 0.642519 3.2:-80537319 None:intergenic
CTGATGATCCCAATGCAGCA+TGG 0.648087 3.2:+80536458 MS.gene06389:CDS
AAACTGATAATAGCAATGCT+CGG 0.648882 3.2:+80533612 MS.gene06389:CDS
ATATGAACTCAATCTATGGA+GGG 0.649955 3.2:+80537133 MS.gene06389:CDS
GGTTCGCATGACCTACTCCA+AGG 0.652153 3.2:+80537657 MS.gene06389:CDS
CAAGTGAACGCGGGTCACAG+TGG 0.652261 3.2:+80536926 MS.gene06389:CDS
ACCTACTCCAAGGATAAGGA+GGG 0.652538 3.2:+80537667 MS.gene06389:CDS
AGAGAGACAAGGCAGGTGGG+AGG 0.652823 3.2:-80534298 None:intergenic
TATGTGTCCAGAAGTCCACC+TGG 0.655480 3.2:+80537695 MS.gene06389:CDS
AAAGAATCTGATGAAAACGC+TGG 0.656465 3.2:+80533977 MS.gene06389:CDS
AACAGAGTATTGCGGCCTGG+TGG 0.656543 3.2:+80536134 MS.gene06389:CDS
GGTAAAGTCCATGCAGTGGG+AGG 0.657793 3.2:+80537636 MS.gene06389:CDS
GCATGGTAAAGTCCATGCAG+TGG 0.661920 3.2:+80537632 MS.gene06389:CDS
TAAACGGATTGGGAATTCAG+TGG 0.664896 3.2:+80537088 MS.gene06389:CDS
ACCCTCCTTATCCTTGGAGT+AGG 0.669418 3.2:-80537668 None:intergenic
CGTCTCCTTAGGCCGCCAGG+TGG 0.669645 3.2:-80537710 None:intergenic
CAAGGCATGGGATAAAGTCG+GGG 0.669765 3.2:-80534201 None:intergenic
CAGTTAGTTCAAGTGAACGC+GGG 0.672917 3.2:+80536917 MS.gene06389:CDS
ATCAGCAGCAAAATCTTCAG+GGG 0.674815 3.2:-80537028 None:intergenic
ATCCTTCAGGAAGAGAGACA+AGG 0.675474 3.2:-80534309 None:intergenic
AATAATGGGAAGGGTATCTG+CGG 0.678257 3.2:-80537310 None:intergenic
AAATAACAAAGACAGCGAAG+AGG 0.679636 3.2:+80533799 MS.gene06389:CDS
TGCCTGAGGATGCGACCAAG+GGG 0.680547 3.2:+80533660 MS.gene06389:CDS
TGGAACCCAATTCAAGCATG+GGG 0.686380 3.2:+80534551 MS.gene06389:CDS
TGAGGTGAAGGAACAGACTG+AGG 0.690937 3.2:+80533571 MS.gene06389:CDS
AGATACGAAGACAGAAGACG+AGG 0.694255 3.2:+80533742 MS.gene06389:CDS
AAAAGAGATGATCTGCATGG+AGG 0.700577 3.2:-80537407 None:intergenic
ATCTTCAGAAGACTTCTCCG+TGG 0.710231 3.2:-80533723 None:intergenic
GATACGAAGACAGAAGACGA+GGG 0.710853 3.2:+80533743 MS.gene06389:CDS
GTGTCCAGAAGTCCACCTGG+CGG 0.714703 3.2:+80537698 MS.gene06389:CDS
CAGCTCCGAAGAGAAGTCGG+AGG 0.726526 3.2:+80533694 MS.gene06389:CDS
TAATCCTGGTGATTTGCCTG+AGG 0.728544 3.2:+80533646 MS.gene06389:CDS
GCCTGAGGATGCGACCAAGG+GGG 0.732614 3.2:+80533661 MS.gene06389:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTCTTTTTCTTAAAA+GGG - chr3.2:80534753-80534772 None:intergenic 10.0%
!!! CAAAATATAAATTTCTATTT+TGG - chr3.2:80536585-80536604 None:intergenic 10.0%
!! AACAAGTATAAAAATAAAAC+AGG + chr3.2:80536727-80536746 MS.gene06389:intron 15.0%
!! ACAAGTATAAAAATAAAACA+GGG + chr3.2:80536728-80536747 MS.gene06389:intron 15.0%
!! TGGAATGAAAAAAAATATTA+TGG + chr3.2:80534810-80534829 MS.gene06389:intron 15.0%
!! TTTGAAAGATTTGAATATTT+GGG + chr3.2:80537263-80537282 MS.gene06389:CDS 15.0%
!!! CAATATTAACAGATTTTTAA+AGG - chr3.2:80534792-80534811 None:intergenic 15.0%
!!! CTTTAAAAATCTGTTAATAT+TGG + chr3.2:80534790-80534809 MS.gene06389:intron 15.0%
!!! GAGAAATAACATATAATTTT+AGG - chr3.2:80534427-80534446 None:intergenic 15.0%
!!! GATTTTTTCTTTTTCTTAAA+AGG - chr3.2:80534754-80534773 None:intergenic 15.0%
!!! TTTTTGTTTACATGTAAATA+AGG - chr3.2:80536075-80536094 None:intergenic 15.0%
!! ATTAACAAAATCAATATGCT+GGG + chr3.2:80536315-80536334 MS.gene06389:CDS 20.0%
!! TACATTAAAATGCACAAAAA+AGG - chr3.2:80536249-80536268 None:intergenic 20.0%
!! TATCATAATAAAGAGAAACT+TGG - chr3.2:80534910-80534929 None:intergenic 20.0%
!!! ACAAGTTAAACAGAAATTTT+TGG - chr3.2:80534665-80534684 None:intergenic 20.0%
!!! ATCAATATCATGGTAAATTT+TGG - chr3.2:80535262-80535281 None:intergenic 20.0%
!!! ATTTTGAATCGTATTCATTT+AGG + chr3.2:80535775-80535794 MS.gene06389:intron 20.0%
!!! CATTTTGTTTGGATTAAATT+TGG + chr3.2:80534608-80534627 MS.gene06389:intron 20.0%
!!! CTTTGAAAGATTTGAATATT+TGG + chr3.2:80537262-80537281 MS.gene06389:CDS 20.0%
!!! TTTTTGGTATATATCATGAT+TGG + chr3.2:80537346-80537365 MS.gene06389:CDS 20.0%
!!! TTTTTTGTGCATTTTAATGT+AGG + chr3.2:80536248-80536267 MS.gene06389:intron 20.0%
! AACCATAATAAAAAGTTTGC+TGG - chr3.2:80537482-80537501 None:intergenic 25.0%
! AATCATGTTAACTAGGATAT+TGG - chr3.2:80536038-80536057 None:intergenic 25.0%
! ATAATACATGTAAATGTCAC+TGG + chr3.2:80535846-80535865 MS.gene06389:intron 25.0%
! ATCTAGTAATCATGTTAACT+AGG - chr3.2:80536045-80536064 None:intergenic 25.0%
! ATGAAGGTAAATCAATATCA+TGG - chr3.2:80535272-80535291 None:intergenic 25.0%
! CATTAACAAAATCAATATGC+TGG + chr3.2:80536314-80536333 MS.gene06389:CDS 25.0%
! TGTAGAAGATCATTTAATGA+AGG - chr3.2:80535288-80535307 None:intergenic 25.0%
! TTTCTCTTTATTATGATACC+TGG + chr3.2:80534912-80534931 MS.gene06389:intron 25.0%
!! AACCAGCAAACTTTTTATTA+TGG + chr3.2:80537477-80537496 MS.gene06389:intron 25.0%
!! ATAAAACAGGGCTTTTTATT+TGG + chr3.2:80536740-80536759 MS.gene06389:intron 25.0%
!!! GTCTTTGTTATTTTCTGTAT+TGG - chr3.2:80533792-80533811 None:intergenic 25.0%
!!! TGTTTGTTATACAGCTATTT+TGG + chr3.2:80535873-80535892 MS.gene06389:intron 25.0%
!!! TTACATTGACTTTATACAAG+AGG + chr3.2:80534581-80534600 MS.gene06389:CDS 25.0%
AAACTGATAATAGCAATGCT+CGG + chr3.2:80533612-80533631 MS.gene06389:CDS 30.0%
AAAGTCATTGAAGAACTTTC+AGG - chr3.2:80535110-80535129 None:intergenic 30.0%
AACAACAGATAGTAATGTAG+AGG + chr3.2:80533931-80533950 MS.gene06389:CDS 30.0%
ATATGAACTCAATCTATGGA+GGG + chr3.2:80537133-80537152 MS.gene06389:CDS 30.0%
ATGGATATGAACTCAATCTA+TGG + chr3.2:80537129-80537148 MS.gene06389:CDS 30.0%
ATGTGCAGTTCATATGTATT+AGG - chr3.2:80535218-80535237 None:intergenic 30.0%
CAAAAACAATTTACAACTGC+AGG + chr3.2:80536089-80536108 MS.gene06389:intron 30.0%
CGTATCTTAATTTCCTCTAT+TGG - chr3.2:80535145-80535164 None:intergenic 30.0%
GAAGATGTTGAAATATGGAA+TGG + chr3.2:80536200-80536219 MS.gene06389:CDS 30.0%
GACTAATTCAGCAATTAACT+CGG - chr3.2:80536608-80536627 None:intergenic 30.0%
GGCATTTATCAATCTTAACT+TGG + chr3.2:80535796-80535815 MS.gene06389:intron 30.0%
TAGAGGAAATTAAGATACGT+TGG + chr3.2:80535146-80535165 MS.gene06389:intron 30.0%
TCAAAATTGGGTGAAAGTTA+CGG + chr3.2:80534503-80534522 MS.gene06389:CDS 30.0%
TCATAACAATCATTGGATAG+TGG - chr3.2:80536400-80536419 None:intergenic 30.0%
TGAAAAGAAAGATGAATCAG+AGG + chr3.2:80533853-80533872 MS.gene06389:CDS 30.0%
TTCCATATTTCAACATCTTC+AGG - chr3.2:80536200-80536219 None:intergenic 30.0%
TTCCTGAAGATGTTGAAATA+TGG + chr3.2:80536195-80536214 MS.gene06389:CDS 30.0%
TTTACAATGTTTACTCGATG+TGG + chr3.2:80535383-80535402 MS.gene06389:intron 30.0%
! AAGTCTTATCTAAACGGATT+GGG + chr3.2:80537078-80537097 MS.gene06389:CDS 30.0%
! TCAATTGTCATTTCATTCTC+TGG + chr3.2:80534387-80534406 MS.gene06389:intron 30.0%
! TCTTTTCAAAGGTTCAGAAA+AGG + chr3.2:80537424-80537443 MS.gene06389:CDS 30.0%
! TTTTGCTAATGCTTATTTGG+TGG + chr3.2:80537500-80537519 MS.gene06389:intron 30.0%
!! AAGTTTGCTGGTTATTAATG+TGG - chr3.2:80537470-80537489 None:intergenic 30.0%
!! AGTTTGCTGGTTATTAATGT+GGG - chr3.2:80537469-80537488 None:intergenic 30.0%
!! CAGATTTTTAAAGGCTATAC+TGG - chr3.2:80534783-80534802 None:intergenic 30.0%
!! TGGTTTTGCTAATGCTTATT+TGG + chr3.2:80537497-80537516 MS.gene06389:intron 30.0%
!! TTGTTATACAGCTATTTTGG+TGG + chr3.2:80535876-80535895 MS.gene06389:intron 30.0%
!!! TGTTATACAGCTATTTTGGT+GGG + chr3.2:80535877-80535896 MS.gene06389:intron 30.0%
AAACAATTTACAACTGCAGG+TGG + chr3.2:80536092-80536111 MS.gene06389:intron 35.0%
AAAGAATCTGATGAAAACGC+TGG + chr3.2:80533977-80533996 MS.gene06389:CDS 35.0%
AAAGTTTGTAATGTTACCGC+TGG + chr3.2:80534178-80534197 MS.gene06389:CDS 35.0%
AAATAACAAAGACAGCGAAG+AGG + chr3.2:80533799-80533818 MS.gene06389:CDS 35.0%
AAGACCCCGTTCATAAATAA+TGG - chr3.2:80537328-80537347 None:intergenic 35.0%
AAGGATCAAGTTAATGGAGT+TGG + chr3.2:80536355-80536374 MS.gene06389:CDS 35.0%
AATGAAACTACGACACAAAC+TGG + chr3.2:80534079-80534098 MS.gene06389:CDS 35.0%
ACAAACAATTTCTTCACTCC+AGG - chr3.2:80534933-80534952 None:intergenic 35.0%
ACACGTGTTATACTAGATGT+TGG + chr3.2:80535480-80535499 MS.gene06389:CDS 35.0%
ACTTCTTCTGATAAAGAAGC+TGG - chr3.2:80535313-80535332 None:intergenic 35.0%
AGAAAACACCATGTCAGTTA+AGG - chr3.2:80536492-80536511 None:intergenic 35.0%
AGACCCCGTTCATAAATAAT+GGG - chr3.2:80537327-80537346 None:intergenic 35.0%
AGATAGTAATGTAGAGGAGA+AGG + chr3.2:80533937-80533956 MS.gene06389:CDS 35.0%
AGCAGAGTCAAAGAATGAAA+AGG + chr3.2:80534120-80534139 MS.gene06389:CDS 35.0%
ATCAGCAAGGATCAAGTTAA+TGG + chr3.2:80536349-80536368 MS.gene06389:CDS 35.0%
ATCTTGTTGATCTAAGCTTG+TGG + chr3.2:80534858-80534877 MS.gene06389:intron 35.0%
CAAAATTGGGTGAAAGTTAC+GGG + chr3.2:80534504-80534523 MS.gene06389:CDS 35.0%
CAATCCGTTTAGATAAGACT+TGG - chr3.2:80537079-80537098 None:intergenic 35.0%
CATTGTAATACCATATCTGC+AGG - chr3.2:80534449-80534468 None:intergenic 35.0%
CCCTTCCCATTATTTATGAA+CGG + chr3.2:80537319-80537338 MS.gene06389:CDS 35.0%
CCTTCCCATTATTTATGAAC+GGG + chr3.2:80537320-80537339 MS.gene06389:CDS 35.0%
CTTCCCATTATTTATGAACG+GGG + chr3.2:80537321-80537340 MS.gene06389:CDS 35.0%
GAATTCAGTGGTCAAATGTA+CGG + chr3.2:80537100-80537119 MS.gene06389:CDS 35.0%
GATATGAACTCAATCTATGG+AGG + chr3.2:80537132-80537151 MS.gene06389:CDS 35.0%
GGTAAGAAAACAGAAGATGA+AGG + chr3.2:80533764-80533783 MS.gene06389:CDS 35.0%
GTTATACTAGATGTTGGATG+TGG + chr3.2:80535486-80535505 MS.gene06389:CDS 35.0%
TAATTTCCTCTATTGGCAGT+TGG - chr3.2:80535138-80535157 None:intergenic 35.0%
TATCAGCAGCAAAATCTTCA+GGG - chr3.2:80537032-80537051 None:intergenic 35.0%
TATTCCTTCCTTAACTGACA+TGG + chr3.2:80536481-80536500 MS.gene06389:intron 35.0%
TCAGGAAGCTTCTGATAAAT+AGG - chr3.2:80536182-80536201 None:intergenic 35.0%
TCGTTGCTCATAACAATCAT+TGG - chr3.2:80536407-80536426 None:intergenic 35.0%
TCTTGTTGATCTAAGCTTGT+GGG + chr3.2:80534859-80534878 MS.gene06389:intron 35.0%
TGACAACCAATATGGTACAT+TGG - chr3.2:80536977-80536996 None:intergenic 35.0%
TGCATCATCAAAGCTCTATT+AGG - chr3.2:80535429-80535448 None:intergenic 35.0%
TGCTGTGTAATTCAAACACA+TGG - chr3.2:80535977-80535996 None:intergenic 35.0%
TGTGACAACTTGACAAGTTA+GGG - chr3.2:80534730-80534749 None:intergenic 35.0%
TTATCAGCAGCAAAATCTTC+AGG - chr3.2:80537033-80537052 None:intergenic 35.0%
TTGAAAAGAGATGATCTGCA+TGG - chr3.2:80537413-80537432 None:intergenic 35.0%
TTGCTGCTGATAATAAACAC+TGG + chr3.2:80537040-80537059 MS.gene06389:CDS 35.0%
! ATTTATGAACGGGGTCTTTT+TGG + chr3.2:80537330-80537349 MS.gene06389:CDS 35.0%
! CAAGTCTTATCTAAACGGAT+TGG + chr3.2:80537077-80537096 MS.gene06389:CDS 35.0%
! CCGTTCATAAATAATGGGAA+GGG - chr3.2:80537322-80537341 None:intergenic 35.0%
! GTGTCCAAGTCTTATCTAAA+CGG + chr3.2:80537072-80537091 MS.gene06389:CDS 35.0%
! TCATCAGATTTTTGACACAG+TGG - chr3.2:80536445-80536464 None:intergenic 35.0%
! TGCAGATCATCTCTTTTCAA+AGG + chr3.2:80537413-80537432 MS.gene06389:CDS 35.0%
!! AAGTTAAGGGGCATCAAAAT+TGG + chr3.2:80534490-80534509 MS.gene06389:CDS 35.0%
!! ACTAAGCTTGCTGAAGTTAA+GGG + chr3.2:80534477-80534496 MS.gene06389:CDS 35.0%
!! AGTTAAGGGGCATCAAAATT+GGG + chr3.2:80534491-80534510 MS.gene06389:CDS 35.0%
!! CAAGAGGTATGCATTTTGTT+TGG + chr3.2:80534597-80534616 MS.gene06389:intron 35.0%
!! GGGAAATATTCTAGAGTAGA+CGG + chr3.2:80533416-80533435 MS.gene06389:CDS 35.0%
!! TGTTATTTCTCCTGCAGATA+TGG + chr3.2:80534436-80534455 MS.gene06389:intron 35.0%
!! TTAACCTTCTCTCTGCTTTT+AGG - chr3.2:80534355-80534374 None:intergenic 35.0%
!! TTTTAAAGGCTATACTGGTG+CGG - chr3.2:80534778-80534797 None:intergenic 35.0%
!!! GTTATACAGCTATTTTGGTG+GGG + chr3.2:80535878-80535897 MS.gene06389:intron 35.0%
AAAAGAGATGATCTGCATGG+AGG - chr3.2:80537410-80537429 None:intergenic 40.0%
AAAGGATGAACATGAAGCTC+AGG + chr3.2:80535569-80535588 MS.gene06389:CDS 40.0%
AACACCATGTCAGTTAAGGA+AGG - chr3.2:80536488-80536507 None:intergenic 40.0%
AAGGAATACCATGCTGCATT+GGG - chr3.2:80536469-80536488 None:intergenic 40.0%
AATCATTTAGCACCTATCCC+AGG + chr3.2:80537373-80537392 MS.gene06389:CDS 40.0%
AGTCTAATCTCTGATGTGAC+AGG + chr3.2:80536860-80536879 MS.gene06389:intron 40.0%
ATATGAACTGCACATCTGTG+AGG + chr3.2:80535223-80535242 MS.gene06389:intron 40.0%
ATCAGCAGCAAAATCTTCAG+GGG - chr3.2:80537031-80537050 None:intergenic 40.0%
CAAAGACCAGAGTTCAAATG+AGG + chr3.2:80534024-80534043 MS.gene06389:CDS 40.0%
CAATCGGTAGATGTCAAACA+CGG - chr3.2:80537221-80537240 None:intergenic 40.0%
CCTGCTATATCTGCTGTAAT+GGG + chr3.2:80535618-80535637 MS.gene06389:CDS 40.0%
CTGAAGGAAAGCTTATTGTC+CGG + chr3.2:80537578-80537597 MS.gene06389:CDS 40.0%
CTTACCATAGACTCCAACTT+GGG - chr3.2:80537004-80537023 None:intergenic 40.0%
GACCATACAAAAAAACCACC+AGG - chr3.2:80536152-80536171 None:intergenic 40.0%
GATATAAGCGCTCTATTGAG+TGG + chr3.2:80534329-80534348 MS.gene06389:CDS 40.0%
GGAATACCTCATTTGAACTC+TGG - chr3.2:80534033-80534052 None:intergenic 40.0%
GGAGAGTAAAAATGAGGTGA+AGG + chr3.2:80533559-80533578 MS.gene06389:CDS 40.0%
GTCAAATGTACGGAATGTCA+TGG + chr3.2:80537110-80537129 MS.gene06389:CDS 40.0%
GTGTGACAACTTGACAAGTT+AGG - chr3.2:80534731-80534750 None:intergenic 40.0%
TAACAAACCCTCCTTATCCT+TGG - chr3.2:80537677-80537696 None:intergenic 40.0%
TAATCGCTTTCCAGTTGTCA+AGG - chr3.2:80534222-80534241 None:intergenic 40.0%
TAGTAATGTAGAGGAGAAGG+TGG + chr3.2:80533940-80533959 MS.gene06389:CDS 40.0%
TCCTGCTATATCTGCTGTAA+TGG + chr3.2:80535617-80535636 MS.gene06389:CDS 40.0%
TGAAGGAAAGCTTATTGTCC+GGG + chr3.2:80537579-80537598 MS.gene06389:CDS 40.0%
TGAATACCTTCAATGTGCCA+TGG - chr3.2:80535708-80535727 None:intergenic 40.0%
TGAGCTTCATGTTCATCCTT+TGG - chr3.2:80535570-80535589 None:intergenic 40.0%
TGGGAACTTGACAACCAATA+TGG - chr3.2:80536985-80537004 None:intergenic 40.0%
TTGACAACTGGAAAGCGATT+AGG + chr3.2:80534221-80534240 MS.gene06389:CDS 40.0%
TTTCAAAGCTGCAGCAAATC+TGG - chr3.2:80537250-80537269 None:intergenic 40.0%
TTTCCAATTGTACCCAGTCT+TGG - chr3.2:80534161-80534180 None:intergenic 40.0%
TTTGTCCTGTTGTGCGTAAA+CGG - chr3.2:80535194-80535213 None:intergenic 40.0%
! AACTGGATCGTTTTCTACAC+AGG + chr3.2:80534096-80534115 MS.gene06389:CDS 40.0%
! AAGCCTTATCCTACTAAGTG+GGG + chr3.2:80536530-80536549 MS.gene06389:intron 40.0%
! AGGTTCAATTTGCTCTTGAG+AGG + chr3.2:80535589-80535608 MS.gene06389:CDS 40.0%
! ATAGAGCGCTTATATCCTTC+AGG - chr3.2:80534325-80534344 None:intergenic 40.0%
! ATTTTCCTCCGACTTCTCTT+CGG - chr3.2:80533702-80533721 None:intergenic 40.0%
! CAAGCCTTATCCTACTAAGT+GGG + chr3.2:80536529-80536548 MS.gene06389:intron 40.0%
! CCCGTTCATAAATAATGGGA+AGG - chr3.2:80537323-80537342 None:intergenic 40.0%
! CTCATTTGAACTCTGGTCTT+TGG - chr3.2:80534026-80534045 None:intergenic 40.0%
! GGAACTTGTTTCAATCAGCA+AGG + chr3.2:80536336-80536355 MS.gene06389:CDS 40.0%
! GGATAGTGGCTTCTTGTATA+TGG - chr3.2:80536386-80536405 None:intergenic 40.0%
! GGTTCAATTTGCTCTTGAGA+GGG + chr3.2:80535590-80535609 MS.gene06389:CDS 40.0%
! GTTCAATTTGCTCTTGAGAG+GGG + chr3.2:80535591-80535610 MS.gene06389:CDS 40.0%
! TCAAATGAGGTATTCCCTTC+CGG + chr3.2:80534037-80534056 MS.gene06389:CDS 40.0%
! TCAGATTTTTGACACAGTGG+AGG - chr3.2:80536442-80536461 None:intergenic 40.0%
! TGCAGGTGGTAAACTTCTTT+TGG + chr3.2:80536106-80536125 MS.gene06389:intron 40.0%
! TGTTTGACATCTACCGATTG+TGG + chr3.2:80537221-80537240 MS.gene06389:intron 40.0%
! TTCAATTTGCTCTTGAGAGG+GGG + chr3.2:80535592-80535611 MS.gene06389:CDS 40.0%
!! AACAGGGCTTTTTATTTGGC+TGG + chr3.2:80536744-80536763 MS.gene06389:intron 40.0%
!! AATAATGGGAAGGGTATCTG+CGG - chr3.2:80537313-80537332 None:intergenic 40.0%
!! CACTAAGCTTGCTGAAGTTA+AGG + chr3.2:80534476-80534495 MS.gene06389:CDS 40.0%
!! CTAAGCTTGCTGAAGTTAAG+GGG + chr3.2:80534478-80534497 MS.gene06389:CDS 40.0%
!! GAGTATCTTACTTTTCCTGG+TGG + chr3.2:80534528-80534547 MS.gene06389:CDS 40.0%
!! GGTGAGTATCTTACTTTTCC+TGG + chr3.2:80534525-80534544 MS.gene06389:CDS 40.0%
!! TAAACGGATTGGGAATTCAG+TGG + chr3.2:80537088-80537107 MS.gene06389:CDS 40.0%
!! TATCTTACTTTTCCTGGTGG+TGG + chr3.2:80534531-80534550 MS.gene06389:CDS 40.0%
!! TCACTTTTCCAAGACAGGAA+GGG - chr3.2:80536692-80536711 None:intergenic 40.0%
!! TTGTTGCTCTAGCCTTGATT+GGG + chr3.2:80533483-80533502 MS.gene06389:CDS 40.0%
!! TTTGTTGCTCTAGCCTTGAT+TGG + chr3.2:80533482-80533501 MS.gene06389:CDS 40.0%
AAGTGCCCCATGCTTGAATT+GGG - chr3.2:80534559-80534578 None:intergenic 45.0%
ACAGTTTAGACCGAACTGGT+AGG + chr3.2:80534994-80535013 MS.gene06389:intron 45.0%
ACCTACTCCAAGGATAAGGA+GGG + chr3.2:80537667-80537686 MS.gene06389:CDS 45.0%
ACTGCATCAAATACTCTCCC+AGG - chr3.2:80535663-80535682 None:intergenic 45.0%
ACTTCAGCAAGCTTAGTGTG+TGG - chr3.2:80534474-80534493 None:intergenic 45.0%
AGAGTTCCATGGCACATTGA+AGG + chr3.2:80535699-80535718 MS.gene06389:CDS 45.0%
AGATACGAAGACAGAAGACG+AGG + chr3.2:80533742-80533761 MS.gene06389:CDS 45.0%
AGTTGGAGTCTATGGTAAGC+CGG + chr3.2:80537005-80537024 MS.gene06389:CDS 45.0%
ATATGGTACATTGGTCAGCC+TGG - chr3.2:80536968-80536987 None:intergenic 45.0%
ATCAAATACTCTCCCAGGGA+AGG - chr3.2:80535658-80535677 None:intergenic 45.0%
ATCCTTCAGGAAGAGAGACA+AGG - chr3.2:80534312-80534331 None:intergenic 45.0%
ATCTTCAGAAGACTTCTCCG+TGG - chr3.2:80533726-80533745 None:intergenic 45.0%
ATTCAAGAGTCCTCCAAGAC+TGG + chr3.2:80534145-80534164 MS.gene06389:CDS 45.0%
CAGTTAGTTCAAGTGAACGC+GGG + chr3.2:80536917-80536936 MS.gene06389:CDS 45.0%
CATCATCCAAACCCCAATCA+AGG - chr3.2:80533498-80533517 None:intergenic 45.0%
CATGACCTACTCCAAGGATA+AGG + chr3.2:80537663-80537682 MS.gene06389:CDS 45.0%
CATGGTAAAGTCCATGCAGT+GGG + chr3.2:80537633-80537652 MS.gene06389:CDS 45.0%
CATTAACGAGCTTGAGAGCA+TGG + chr3.2:80537615-80537634 MS.gene06389:CDS 45.0%
CCACTTAGTAGGATAAGGCT+TGG - chr3.2:80536531-80536550 None:intergenic 45.0%
CCAGTTAGTTCAAGTGAACG+CGG + chr3.2:80536916-80536935 MS.gene06389:CDS 45.0%
CCCATTACAGCAGATATAGC+AGG - chr3.2:80535621-80535640 None:intergenic 45.0%
CGGACAATAAGCTTTCCTTC+AGG - chr3.2:80537580-80537599 None:intergenic 45.0%
CGGCAGTTTGAAGATAATCC+TGG + chr3.2:80533632-80533651 MS.gene06389:CDS 45.0%
CTGCATCAAATACTCTCCCA+GGG - chr3.2:80535662-80535681 None:intergenic 45.0%
CTTATCCTACTAAGTGGGGT+CGG + chr3.2:80536534-80536553 MS.gene06389:intron 45.0%
CTTCCTGTCTTGGAAAAGTG+AGG + chr3.2:80536691-80536710 MS.gene06389:intron 45.0%
CTTTCCAGTTGTCAAGGCAT+GGG - chr3.2:80534216-80534235 None:intergenic 45.0%
GAACTCTACAACGTGCACAA+TGG - chr3.2:80535686-80535705 None:intergenic 45.0%
GAAGGAATACCATGCTGCAT+TGG - chr3.2:80536470-80536489 None:intergenic 45.0%
GAAGTCGGAGGAAAATTCCA+CGG + chr3.2:80533706-80533725 MS.gene06389:CDS 45.0%
GATACGAAGACAGAAGACGA+GGG + chr3.2:80533743-80533762 MS.gene06389:CDS 45.0%
GCAAATCTGGAAGCCACAAT+CGG - chr3.2:80537237-80537256 None:intergenic 45.0%
GCTTACCATAGACTCCAACT+TGG - chr3.2:80537005-80537024 None:intergenic 45.0%
GGAAAGCGATTAGGAGTCTT+CGG + chr3.2:80534230-80534249 MS.gene06389:CDS 45.0%
GGCTGACCAATGTACCATAT+TGG + chr3.2:80536968-80536987 MS.gene06389:CDS 45.0%
GTCAAGGCATGGGATAAAGT+CGG - chr3.2:80534206-80534225 None:intergenic 45.0%
GTGGAACCCAATTCAAGCAT+GGG + chr3.2:80534550-80534569 MS.gene06389:CDS 45.0%
TAATGACCTCAACAGTGTCC+CGG - chr3.2:80537600-80537619 None:intergenic 45.0%
TACCAGTTCGGTCTAAACTG+TGG - chr3.2:80534995-80535014 None:intergenic 45.0%
TCAAATACTCTCCCAGGGAA+GGG - chr3.2:80535657-80535676 None:intergenic 45.0%
TCAAGGCATGGGATAAAGTC+GGG - chr3.2:80534205-80534224 None:intergenic 45.0%
TCTGTACCAACTGCCAATAG+AGG + chr3.2:80535129-80535148 MS.gene06389:intron 45.0%
TGGAACCCAATTCAAGCATG+GGG + chr3.2:80534551-80534570 MS.gene06389:CDS 45.0%
TGGTTGTCAAGTTCCCAAGT+TGG + chr3.2:80536988-80537007 MS.gene06389:CDS 45.0%
TTAGACCGAACTGGTAGGAA+TGG + chr3.2:80534999-80535018 MS.gene06389:intron 45.0%
TTATCCCATGCCTTGACAAC+TGG + chr3.2:80534209-80534228 MS.gene06389:CDS 45.0%
TTCAAGAGTCCTCCAAGACT+GGG + chr3.2:80534146-80534165 MS.gene06389:CDS 45.0%
TTCTGTAGTTCCCGTGCAAA+AGG + chr3.2:80533526-80533545 MS.gene06389:CDS 45.0%
TTGTCCTGTTGTGCGTAAAC+GGG - chr3.2:80535193-80535212 None:intergenic 45.0%
! AAATGAGGTATTCCCTTCCG+GGG + chr3.2:80534039-80534058 MS.gene06389:CDS 45.0%
! ACTTTTCCAAGACAGGAAGG+GGG - chr3.2:80536690-80536709 None:intergenic 45.0%
! AGTTCCCAAGTTGGAGTCTA+TGG + chr3.2:80536997-80537016 MS.gene06389:CDS 45.0%
! ATGTGCCATTCCTACCAGTT+CGG - chr3.2:80535007-80535026 None:intergenic 45.0%
! CAAATGAGGTATTCCCTTCC+GGG + chr3.2:80534038-80534057 MS.gene06389:CDS 45.0%
! CACTTTTCCAAGACAGGAAG+GGG - chr3.2:80536691-80536710 None:intergenic 45.0%
! CAGATGCAATCTAGCTTCTC+TGG + chr3.2:80537528-80537547 MS.gene06389:intron 45.0%
! CCAAGCCTTATCCTACTAAG+TGG + chr3.2:80536528-80536547 MS.gene06389:intron 45.0%
! TAATCCTGGTGATTTGCCTG+AGG + chr3.2:80533646-80533665 MS.gene06389:CDS 45.0%
! TGCAATGTCACTTGCACCAA+AGG + chr3.2:80535551-80535570 MS.gene06389:CDS 45.0%
!! ACCTCATTTTTACTCTCCCG+AGG - chr3.2:80533557-80533576 None:intergenic 45.0%
!! CTCACTTTTCCAAGACAGGA+AGG - chr3.2:80536693-80536712 None:intergenic 45.0%
!! GTTCCTCACTTTTCCAAGAC+AGG - chr3.2:80536697-80536716 None:intergenic 45.0%
!! TGGAGCTGAACAGAGTATTG+CGG + chr3.2:80536126-80536145 MS.gene06389:CDS 45.0%
!! TGTTGCTCTAGCCTTGATTG+GGG + chr3.2:80533484-80533503 MS.gene06389:CDS 45.0%
!!! ATACAGCTATTTTGGTGGGG+TGG + chr3.2:80535881-80535900 MS.gene06389:intron 45.0%
!!! GGCCTGGTGGTTTTTTTGTA+TGG + chr3.2:80536147-80536166 MS.gene06389:CDS 45.0%
!!! TACAGCTATTTTGGTGGGGT+GGG + chr3.2:80535882-80535901 MS.gene06389:intron 45.0%
AAAGAGAAAGCCTCCGAAGC+TGG - chr3.2:80535517-80535536 None:intergenic 50.0%
ACCCTCCTTATCCTTGGAGT+AGG - chr3.2:80537671-80537690 None:intergenic 50.0%
ACTCTGCCTGACATTGCTTG+GGG + chr3.2:80535450-80535469 MS.gene06389:CDS 50.0%
AGACTCTGCCTGACATTGCT+TGG + chr3.2:80535448-80535467 MS.gene06389:intron 50.0%
CAAGGCATGGGATAAAGTCG+GGG - chr3.2:80534204-80534223 None:intergenic 50.0%
CCAATTGTACCCAGTCTTGG+AGG - chr3.2:80534158-80534177 None:intergenic 50.0%
CCGCGTTCACTTGAACTAAC+TGG - chr3.2:80536919-80536938 None:intergenic 50.0%
CCTCCAAGACTGGGTACAAT+TGG + chr3.2:80534155-80534174 MS.gene06389:CDS 50.0%
CGACCCCACTTAGTAGGATA+AGG - chr3.2:80536536-80536555 None:intergenic 50.0%
CGGTAGATGTCAAACACGGA+AGG - chr3.2:80537217-80537236 None:intergenic 50.0%
CTGATGATCCCAATGCAGCA+TGG + chr3.2:80536458-80536477 MS.gene06389:CDS 50.0%
GAAGGAACAGACTGAGGTGA+GGG + chr3.2:80533577-80533596 MS.gene06389:CDS 50.0%
GACCTACTCCAAGGATAAGG+AGG + chr3.2:80537666-80537685 MS.gene06389:CDS 50.0%
GACTCTGCCTGACATTGCTT+GGG + chr3.2:80535449-80535468 MS.gene06389:intron 50.0%
GCATGGTAAAGTCCATGCAG+TGG + chr3.2:80537632-80537651 MS.gene06389:CDS 50.0%
GCCTCGGGAGAGTAAAAATG+AGG + chr3.2:80533553-80533572 MS.gene06389:CDS 50.0%
GCTTTCCAGTTGTCAAGGCA+TGG - chr3.2:80534217-80534236 None:intergenic 50.0%
GGTGGAACCCAATTCAAGCA+TGG + chr3.2:80534549-80534568 MS.gene06389:CDS 50.0%
GTGCACGTTGTAGAGTTCCA+TGG + chr3.2:80535688-80535707 MS.gene06389:CDS 50.0%
GTGGCCTAAAAGCAGAGAGA+AGG + chr3.2:80534348-80534367 MS.gene06389:CDS 50.0%
TATGTGTCCAGAAGTCCACC+TGG + chr3.2:80537695-80537714 MS.gene06389:CDS 50.0%
TATTGTCCGGGACACTGTTG+AGG + chr3.2:80537591-80537610 MS.gene06389:CDS 50.0%
TGAAGGAACAGACTGAGGTG+AGG + chr3.2:80533576-80533595 MS.gene06389:CDS 50.0%
TGAGGTGAAGGAACAGACTG+AGG + chr3.2:80533571-80533590 MS.gene06389:CDS 50.0%
TGCCACAGTTTAGACCGAAC+TGG + chr3.2:80534990-80535009 MS.gene06389:intron 50.0%
TGCCTTGTCTCTCTTCCTGA+AGG + chr3.2:80534307-80534326 MS.gene06389:CDS 50.0%
TGTCAGCTCCGAAGAGAAGT+CGG + chr3.2:80533691-80533710 MS.gene06389:CDS 50.0%
TGTCCTGTTGTGCGTAAACG+GGG - chr3.2:80535192-80535211 None:intergenic 50.0%
TTCAGGAAGAGAGACAAGGC+AGG - chr3.2:80534308-80534327 None:intergenic 50.0%
TTCTTACCCCCTTCCTGTCT+TGG + chr3.2:80536681-80536700 MS.gene06389:intron 50.0%
TTGAATTGGGTTCCACCACC+AGG - chr3.2:80534546-80534565 None:intergenic 50.0%
TTGAGTGTCTCCGTCTCCTT+AGG - chr3.2:80537724-80537743 None:intergenic 50.0%
! CTCTGGTAGCTGAGGTTGAT+CGG + chr3.2:80537545-80537564 MS.gene06389:CDS 50.0%
! CTGAGGTTGATCGGATTCTC+AGG + chr3.2:80537554-80537573 MS.gene06389:CDS 50.0%
! GAAGTGCCCCATGCTTGAAT+TGG - chr3.2:80534560-80534579 None:intergenic 50.0%
! TCTAGCTTCTCTGGTAGCTG+AGG + chr3.2:80537537-80537556 MS.gene06389:CDS 50.0%
! TTTTGGTGGGGTGGGTATGT+TGG + chr3.2:80535890-80535909 MS.gene06389:intron 50.0%
!! CTCTAGCCTTGATTGGGGTT+TGG + chr3.2:80533489-80533508 MS.gene06389:CDS 50.0%
!! CTGCTGTAATGGGCACAAAG+AGG + chr3.2:80535628-80535647 MS.gene06389:CDS 50.0%
ACAAAGAGGCTTCCCTTCCC+TGG + chr3.2:80535642-80535661 MS.gene06389:CDS 55.0%
ACAGACTGAGGTGAGGGAAC+AGG + chr3.2:80533583-80533602 MS.gene06389:CDS 55.0%
ACTAAGTGGGGTCGGCTATG+TGG + chr3.2:80536542-80536561 MS.gene06389:intron 55.0%
ACTGCACATCTGTGAGGCAC+TGG + chr3.2:80535229-80535248 MS.gene06389:intron 55.0%
AGGAAGAGAGACAAGGCAGG+TGG - chr3.2:80534305-80534324 None:intergenic 55.0%
CAAAGAGGCTTCCCTTCCCT+GGG + chr3.2:80535643-80535662 MS.gene06389:CDS 55.0%
CATAGCCGACCCCACTTAGT+AGG - chr3.2:80536542-80536561 None:intergenic 55.0%
CGTTTGCCCCAAGCAATGTC+AGG - chr3.2:80535459-80535478 None:intergenic 55.0%
GATCGGATTCTCAGGCCTGA+AGG + chr3.2:80537562-80537581 MS.gene06389:CDS 55.0%
GCAGCAAAATCTTCAGGGGC+CGG - chr3.2:80537027-80537046 None:intergenic 55.0%
GCATCCTCAGGCAAATCACC+AGG - chr3.2:80533653-80533672 None:intergenic 55.0%
GCTGACATTGCTATCCCCCT+TGG - chr3.2:80533678-80533697 None:intergenic 55.0%
GCTTGTGGGAAGCAGCTCAT+AGG + chr3.2:80534873-80534892 MS.gene06389:intron 55.0%
GGAAGAGAGACAAGGCAGGT+GGG - chr3.2:80534304-80534323 None:intergenic 55.0%
GGATGTGGAGTTGCCAGCTT+CGG + chr3.2:80535501-80535520 MS.gene06389:CDS 55.0%
GGTAAAGTCCATGCAGTGGG+AGG + chr3.2:80537636-80537655 MS.gene06389:CDS 55.0%
GGTCACAGTGGCCAGAAAAG+TGG + chr3.2:80536938-80536957 MS.gene06389:CDS 55.0%
GGTTCGCATGACCTACTCCA+AGG + chr3.2:80537657-80537676 MS.gene06389:CDS 55.0%
TAGAAGCTCAGACTGAGCCC+CGG - chr3.2:80534059-80534078 None:intergenic 55.0%
TTGCCTGAGGATGCGACCAA+GGG + chr3.2:80533659-80533678 MS.gene06389:CDS 55.0%
TTGTGCGTAAACGGGGAGGA+GGG - chr3.2:80535185-80535204 None:intergenic 55.0%
TTTGCCTGAGGATGCGACCA+AGG + chr3.2:80533658-80533677 MS.gene06389:CDS 55.0%
!! AACAGAGTATTGCGGCCTGG+TGG + chr3.2:80536134-80536153 MS.gene06389:CDS 55.0%
!! CAGCGAAGAGGCGTCTACTA+AGG + chr3.2:80533811-80533830 MS.gene06389:CDS 55.0%
!! CTGAACAGAGTATTGCGGCC+TGG + chr3.2:80536131-80536150 MS.gene06389:CDS 55.0%
AGAGAGACAAGGCAGGTGGG+AGG - chr3.2:80534301-80534320 None:intergenic 60.0%
AGGCAGGTGGGAGGTTCTTC+AGG - chr3.2:80534292-80534311 None:intergenic 60.0%
CAAGTGAACGCGGGTCACAG+TGG + chr3.2:80536926-80536945 MS.gene06389:CDS 60.0%
CAGCTCCGAAGAGAAGTCGG+AGG + chr3.2:80533694-80533713 MS.gene06389:CDS 60.0%
CATGCGAACCTCCCACTGCA+TGG - chr3.2:80537647-80537666 None:intergenic 60.0%
CCGTGCAAAAGGTCGTGCCT+CGG + chr3.2:80533537-80533556 MS.gene06389:CDS 60.0%
CCTCCCCGTTTACGCACAAC+AGG + chr3.2:80535186-80535205 MS.gene06389:intron 60.0%
CCTGTTGTGCGTAAACGGGG+AGG - chr3.2:80535189-80535208 None:intergenic 60.0%
CGTGCAAAAGGTCGTGCCTC+GGG + chr3.2:80533538-80533557 MS.gene06389:CDS 60.0%
GGTACATTGGTCAGCCTGGC+TGG - chr3.2:80536964-80536983 None:intergenic 60.0%
GTGTCCAGAAGTCCACCTGG+CGG + chr3.2:80537698-80537717 MS.gene06389:CDS 60.0%
GTTGTGCGTAAACGGGGAGG+AGG - chr3.2:80535186-80535205 None:intergenic 60.0%
TGCCTGAGGATGCGACCAAG+GGG + chr3.2:80533660-80533679 MS.gene06389:CDS 60.0%
TGGGATAAAGTCGGGGCCAG+CGG - chr3.2:80534197-80534216 None:intergenic 60.0%
TGTGCGTAAACGGGGAGGAG+GGG - chr3.2:80535184-80535203 None:intergenic 60.0%
TGTGGAGTTGCCAGCTTCGG+AGG + chr3.2:80535504-80535523 MS.gene06389:CDS 60.0%
! CCGAGGCACGACCTTTTGCA+CGG - chr3.2:80533540-80533559 None:intergenic 60.0%
! CGAGGCACGACCTTTTGCAC+GGG - chr3.2:80533539-80533558 None:intergenic 60.0%
!!! AGCCTGGCTGGCCACTTTTC+TGG - chr3.2:80536952-80536971 None:intergenic 60.0%
AGCTCAGACTGAGCCCCGGA+AGG - chr3.2:80534055-80534074 None:intergenic 65.0%
CACCTGGCGGCCTAAGGAGA+CGG + chr3.2:80537711-80537730 MS.gene06389:CDS 65.0%
GAAGTCCACCTGGCGGCCTA+AGG + chr3.2:80537705-80537724 MS.gene06389:CDS 65.0%
GCCTGAGGATGCGACCAAGG+GGG + chr3.2:80533661-80533680 MS.gene06389:CDS 65.0%
GCTCAGACTGAGCCCCGGAA+GGG - chr3.2:80534054-80534073 None:intergenic 65.0%
GGCCAGAAAAGTGGCCAGCC+AGG + chr3.2:80536947-80536966 MS.gene06389:CDS 65.0%
GTGCGTAAACGGGGAGGAGG+GGG - chr3.2:80535183-80535202 None:intergenic 65.0%
TCCCCCTTGGTCGCATCCTC+AGG - chr3.2:80533665-80533684 None:intergenic 65.0%
TGCGTAAACGGGGAGGAGGG+GGG - chr3.2:80535182-80535201 None:intergenic 65.0%
! TAGGCCGCCAGGTGGACTTC+TGG - chr3.2:80537705-80537724 None:intergenic 65.0%
CGTCTCCTTAGGCCGCCAGG+TGG - chr3.2:80537713-80537732 None:intergenic 70.0%
CTCCGTCTCCTTAGGCCGCC+AGG - chr3.2:80537716-80537735 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 80533407 80537759 80533407 ID=MS.gene06389
chr3.2 mRNA 80533407 80537759 80533407 ID=MS.gene06389.t1;Parent=MS.gene06389
chr3.2 exon 80533407 80534369 80533407 ID=MS.gene06389.t1.exon1;Parent=MS.gene06389.t1
chr3.2 CDS 80533407 80534369 80533407 ID=cds.MS.gene06389.t1;Parent=MS.gene06389.t1
chr3.2 exon 80534453 80534602 80534453 ID=MS.gene06389.t1.exon2;Parent=MS.gene06389.t1
chr3.2 CDS 80534453 80534602 80534453 ID=cds.MS.gene06389.t1;Parent=MS.gene06389.t1
chr3.2 exon 80535450 80535720 80535450 ID=MS.gene06389.t1.exon3;Parent=MS.gene06389.t1
chr3.2 CDS 80535450 80535720 80535450 ID=cds.MS.gene06389.t1;Parent=MS.gene06389.t1
chr3.2 exon 80536111 80536221 80536111 ID=MS.gene06389.t1.exon4;Parent=MS.gene06389.t1
chr3.2 CDS 80536111 80536221 80536111 ID=cds.MS.gene06389.t1;Parent=MS.gene06389.t1
chr3.2 exon 80536305 80536479 80536305 ID=MS.gene06389.t1.exon5;Parent=MS.gene06389.t1
chr3.2 CDS 80536305 80536479 80536305 ID=cds.MS.gene06389.t1;Parent=MS.gene06389.t1
chr3.2 exon 80536882 80537154 80536882 ID=MS.gene06389.t1.exon6;Parent=MS.gene06389.t1
chr3.2 CDS 80536882 80537154 80536882 ID=cds.MS.gene06389.t1;Parent=MS.gene06389.t1
chr3.2 exon 80537251 80537445 80537251 ID=MS.gene06389.t1.exon7;Parent=MS.gene06389.t1
chr3.2 CDS 80537251 80537445 80537251 ID=cds.MS.gene06389.t1;Parent=MS.gene06389.t1
chr3.2 exon 80537531 80537759 80537531 ID=MS.gene06389.t1.exon8;Parent=MS.gene06389.t1
chr3.2 CDS 80537531 80537759 80537531 ID=cds.MS.gene06389.t1;Parent=MS.gene06389.t1
Gene Sequence

>MS.gene06389

ATGGCTTTAGGGAAATATTCTAGAGTAGACGGTAGAAGATCGTCGAGTTACTGTTCAACAGTGACTATAGTTGTGTTTGTTGCTCTAGCCTTGATTGGGGTTTGGATGATGACATCATCTTCTGTAGTTCCCGTGCAAAAGGTCGTGCCTCGGGAGAGTAAAAATGAGGTGAAGGAACAGACTGAGGTGAGGGAACAGGTGAGTGAAACTGATAATAGCAATGCTCGGCAGTTTGAAGATAATCCTGGTGATTTGCCTGAGGATGCGACCAAGGGGGATAGCAATGTCAGCTCCGAAGAGAAGTCGGAGGAAAATTCCACGGAGAAGTCTTCTGAAGATACGAAGACAGAAGACGAGGGTAAGAAAACAGAAGATGAAGGCTCCAATACAGAAAATAACAAAGACAGCGAAGAGGCGTCTACTAAGGAATCTGAATCTGATGAGAGTGAAAAGAAAGATGAATCAGAGGAGAACAACAAGTCTGATTCAGATGAAAGTGAAAAGAAATCTAGTGACTCGAATGAAACAACAGATAGTAATGTAGAGGAGAAGGTGGAACAAAGCGAGAACAAAGAATCTGATGAAAACGCTGGTGAGAAGAATACAGATGATAATGCCAAAGACCAGAGTTCAAATGAGGTATTCCCTTCCGGGGCTCAGTCTGAGCTTCTAAATGAAACTACGACACAAACTGGATCGTTTTCTACACAGGCAGCAGAGTCAAAGAATGAAAAGGAGATTCAAGAGTCCTCCAAGACTGGGTACAATTGGAAAGTTTGTAATGTTACCGCTGGCCCCGACTTTATCCCATGCCTTGACAACTGGAAAGCGATTAGGAGTCTTCGGAGCACTAAACACTATGAACATCGAGAAAGACACTGTCCTGAAGAACCTCCCACCTGCCTTGTCTCTCTTCCTGAAGGATATAAGCGCTCTATTGAGTGGCCTAAAAGCAGAGAGAAGGTTAAAATCAAATCTTGTCAATTGTCATTTCATTCTCTGGTTGTTTTTCTTTTTCCTAAAATTATATGTTATTTCTCCTGCAGATATGGTATTACAATGTTCCACACACTAAGCTTGCTGAAGTTAAGGGGCATCAAAATTGGGTGAAAGTTACGGGTGAGTATCTTACTTTTCCTGGTGGTGGAACCCAATTCAAGCATGGGGCACTTCATTACATTGACTTTATACAAGAGGTATGCATTTTGTTTGGATTAAATTTGGCATTTATTTGCTGCTTTTGTATTTAATTTTTCCAAAAATTTCTGTTTAACTTGTATATTATCTGAACTTTCAAGATCAATATATAATCAATGTAATCCCTAACTTGTCAAGTTGTCACACCCTTTTAAGAAAAAGAAAAAATCACCGCACCAGTATAGCCTTTAAAAATCTGTTAATATTGGAATGAAAAAAAATATTATGGCAATTCAACTCTATAGAGCGTAAAAATCTTGTTGATCTAAGCTTGTGGGAAGCAGCTCATAGGTAGCTTCTCGTCCAAGTTTCTCTTTATTATGATACCTGGAGTGAAGAAATTGTTTGTTGCTATCTCAACACAATTATGATTATTTTTCATGTTCTGCCACAGTTTAGACCGAACTGGTAGGAATGGCACATATGATCTGCATTGACTAATAAACAAATAGTAAATGAGATACAAAAATTGCAGTTCAACTATAGTATTGAATTTGAGTAGACCTGAAAGTTCTTCAATGACTTTCTGTACCAACTGCCAATAGAGGAAATTAAGATACGTTGGATGATAAAATCCCCCCTCCTCCCCGTTTACGCACAACAGGACAAATCCTAATACATATGAACTGCACATCTGTGAGGCACTGGATGACAACCAAAATTTACCATGATATTGATTTACCTTCATTAAATGATCTTCTACAAACCAGCTTCTTTATCAGAAGAAGTTATGTGAAATCTACATACTTTCATCTTAAACTTTTTTTAGATTTCTAGAATTTACAATGTTTACTCGATGTGGACGAGCAGTCAAGCATTTTACCTAATAGAGCTTTGATGATGCAGACTCTGCCTGACATTGCTTGGGGCAAACGCACACGTGTTATACTAGATGTTGGATGTGGAGTTGCCAGCTTCGGAGGCTTTCTCTTTGATAGAGATGTACTTGCAATGTCACTTGCACCAAAGGATGAACATGAAGCTCAGGTTCAATTTGCTCTTGAGAGGGGGATTCCTGCTATATCTGCTGTAATGGGCACAAAGAGGCTTCCCTTCCCTGGGAGAGTATTTGATGCAGTCCATTGTGCACGTTGTAGAGTTCCATGGCACATTGAAGGTATTCAGATTACACAGATTCTGTTTACATGATTAGATTAGTTTATTATATAGAATTTTGAATCGTATTCATTTAGGCATTTATCAATCTTAACTTGGTATATAAATTGTAGCGACAGACAACATATAATACATGTAAATGTCACTGGATTTTGTTTGTTATACAGCTATTTTGGTGGGGTGGGTATGTTGGATTATTTTACGTTATTCTTACTATCAAGATGAAGAGAAAAATGTGTGACGTTTGATGAAATCCATGTGTTTGAATTACACAGCAGAGACTCTACTATTTATATGCAATAATTATGAGAATCACCAATATCCTAGTTAACATGATTACTAGATTTGATTACCTTATTTACATGTAAACAAAAACAATTTACAACTGCAGGTGGTAAACTTCTTTTGGAGCTGAACAGAGTATTGCGGCCTGGTGGTTTTTTTGTATGGTCTGCGACTCCTATTTATCAGAAGCTTCCTGAAGATGTTGAAATATGGAATGGTAAATAATAACTAGTCATGTGTTCCTTTTTTGTGCATTTTAATGTAGGTTTTCAATCTTGACATTTATGAATTTGTTAACAGCGATGAAAGCATTAACAAAATCAATATGCTGGGAACTTGTTTCAATCAGCAAGGATCAAGTTAATGGAGTTGGTGTAGCCATATACAAGAAGCCACTATCCAATGATTGTTATGAGCAACGATCAAAGAATGAGCCTCCACTGTGTCAAAAATCTGATGATCCCAATGCAGCATGGTATTCCTTCCTTAACTGACATGGTGTTTTCTTAAGCAATAACAACAACCAAGCCTTATCCTACTAAGTGGGGTCGGCTATGTGGTTTTTTTAAAGCAAAAACCAAAATAGAAATTTATATTTTGCCGAGTTAATTGCTGAATTAGTCTTTGATTGCAGTCGCTTACACTGAGAAAACTTTAAAACAGAGCTGATAGTTGCTTCTTACCCCCTTCCTGTCTTGGAAAAGTGAGGAACATTTGTATAAAACAAGTATAAAAATAAAACAGGGCTTTTTATTTGGCTGGAGACTTAGATGTTTCTGCTGCAAATGAACAATTATTGTACTTCGAGATTTATCTGCGAAATTTTCAATTACACTAGTATTATAATGTTCATGCAGTCTAATCTCTGATGTGACAGGTATATTAAATTGCAAGCATGCATACACAAAGTGCCAGTTAGTTCAAGTGAACGCGGGTCACAGTGGCCAGAAAAGTGGCCAGCCAGGCTGACCAATGTACCATATTGGTTGTCAAGTTCCCAAGTTGGAGTCTATGGTAAGCCGGCCCCTGAAGATTTTGCTGCTGATAATAAACACTGGAAACGTGTAGTGTCCAAGTCTTATCTAAACGGATTGGGAATTCAGTGGTCAAATGTACGGAATGTCATGGATATGAACTCAATCTATGGAGGGTGAGCAAAAATCATTGTTTCAAATATTATTGTGAACTATTATATACTTACTAATATGTCCTTCCGTGTTTGACATCTACCGATTGTGGCTTCCAGATTTGCTGCAGCTTTGAAAGATTTGAATATTTGGGTCATGAATGTAGTTTCAATAGACTCCGCAGATACCCTTCCCATTATTTATGAACGGGGTCTTTTTGGTATATATCATGATTGGTGTGAATCATTTAGCACCTATCCCAGGACGTATGATCTCCTCCATGCAGATCATCTCTTTTCAAAGGTTCAGAAAAGGTGAAAATAATTATTTCATTCCCACATTAATAACCAGCAAACTTTTTATTATGGTTTTGCTAATGCTTATTTGGTGGTCACGCAGATGCAATCTAGCTTCTCTGGTAGCTGAGGTTGATCGGATTCTCAGGCCTGAAGGAAAGCTTATTGTCCGGGACACTGTTGAGGTCATTAACGAGCTTGAGAGCATGGTAAAGTCCATGCAGTGGGAGGTTCGCATGACCTACTCCAAGGATAAGGAGGGTTTGTTATGTGTCCAGAAGTCCACCTGGCGGCCTAAGGAGACGGAGACACTCAAGTATGCTATTGTTTAA
Protein sequence

>MS.gene06389.t1

MALGKYSRVDGRRSSSYCSTVTIVVFVALALIGVWMMTSSSVVPVQKVVPRESKNEVKEQTEVREQVSETDNSNARQFEDNPGDLPEDATKGDSNVSSEEKSEENSTEKSSEDTKTEDEGKKTEDEGSNTENNKDSEEASTKESESDESEKKDESEENNKSDSDESEKKSSDSNETTDSNVEEKVEQSENKESDENAGEKNTDDNAKDQSSNEVFPSGAQSELLNETTTQTGSFSTQAAESKNEKEIQESSKTGYNWKVCNVTAGPDFIPCLDNWKAIRSLRSTKHYEHRERHCPEEPPTCLVSLPEGYKRSIEWPKSREKIWYYNVPHTKLAEVKGHQNWVKVTGEYLTFPGGGTQFKHGALHYIDFIQETLPDIAWGKRTRVILDVGCGVASFGGFLFDRDVLAMSLAPKDEHEAQVQFALERGIPAISAVMGTKRLPFPGRVFDAVHCARCRVPWHIEGGKLLLELNRVLRPGGFFVWSATPIYQKLPEDVEIWNAMKALTKSICWELVSISKDQVNGVGVAIYKKPLSNDCYEQRSKNEPPLCQKSDDPNAAWYIKLQACIHKVPVSSSERGSQWPEKWPARLTNVPYWLSSSQVGVYGKPAPEDFAADNKHWKRVVSKSYLNGLGIQWSNVRNVMDMNSIYGGFAAALKDLNIWVMNVVSIDSADTLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADHLFSKVQKRCNLASLVAEVDRILRPEGKLIVRDTVEVINELESMVKSMQWEVRMTYSKDKEGLLCVQKSTWRPKETETLKYAIV