AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene063909

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063909.t1 MTR_3g112370 96.726 733 24 0 1 733 1 733 0.0 1481
MS.gene063909.t1 MTR_1g023120 81.303 706 130 2 25 729 26 730 0.0 1221
MS.gene063909.t1 MTR_1g023120 81.129 673 125 2 58 729 1 672 0.0 1160
MS.gene063909.t1 MTR_5g021190 71.487 733 205 3 1 732 1 730 0.0 1114
MS.gene063909.t1 MTR_8g016230 63.686 727 253 6 14 732 7 730 0.0 969
MS.gene063909.t1 MTR_2g100110 64.557 711 245 5 26 732 26 733 0.0 963
MS.gene063909.t1 MTR_1g018200 63.727 703 252 3 26 726 29 730 0.0 956
MS.gene063909.t1 MTR_2g039120 62.693 713 262 3 17 726 15 726 0.0 952
MS.gene063909.t1 MTR_2g039120 62.445 679 251 3 17 692 15 692 0.0 905
MS.gene063909.t1 MTR_2g094020 53.020 745 311 10 9 732 4 730 0.0 810
MS.gene063909.t1 MTR_2g100110 66.312 564 187 2 26 587 26 588 0.0 806
MS.gene063909.t1 MTR_2g039120 62.029 611 229 2 17 625 15 624 0.0 803
MS.gene063909.t1 MTR_2g094060 53.053 737 319 9 9 732 4 726 0.0 800
MS.gene063909.t1 MTR_2g094060 53.053 737 319 9 9 732 4 726 0.0 800
MS.gene063909.t1 MTR_4g059680 53.370 727 301 9 26 732 24 732 0.0 787
MS.gene063909.t1 MTR_2g039120 63.525 573 207 1 17 587 15 587 0.0 774
MS.gene063909.t1 MTR_3g096900 51.715 729 336 7 9 724 7 732 0.0 765
MS.gene063909.t1 MTR_2g094060 53.525 695 296 9 9 690 4 684 0.0 759
MS.gene063909.t1 MTR_8g085210 50.604 745 320 11 28 733 50 785 0.0 736
MS.gene063909.t1 MTR_3g096900 51.220 697 324 7 9 692 7 700 0.0 718
MS.gene063909.t1 MTR_2g042610 47.844 719 359 7 27 732 26 741 0.0 691
MS.gene063909.t1 MTR_3g096910 48.686 723 331 10 9 722 7 698 0.0 670
MS.gene063909.t1 MTR_3g088520 50.570 702 304 12 26 722 24 687 0.0 667
MS.gene063909.t1 MTR_5g024080 47.493 718 361 9 26 732 8 720 0.0 664
MS.gene063909.t1 MTR_5g025830 46.602 721 358 11 27 732 27 735 0.0 662
MS.gene063909.t1 MTR_3g117840 47.051 712 326 15 26 723 33 707 0.0 657
MS.gene063909.t1 MTR_4g073290 45.317 726 359 11 9 723 5 703 0.0 644
MS.gene063909.t1 MTR_3g096900 51.364 623 291 5 9 622 7 626 0.0 637
MS.gene063909.t1 MTR_3g005570 45.792 701 352 12 18 700 14 704 0.0 627
MS.gene063909.t1 MTR_3g088520 49.552 670 295 12 58 722 1 632 0.0 619
MS.gene063909.t1 MTR_3g096910 45.423 579 277 9 152 722 1 548 1.01e-165 489
MS.gene063909.t1 MTR_4g126330 40.488 410 144 9 285 692 133 444 4.13e-84 274
MS.gene063909.t1 MTR_4g126330 77.174 92 21 0 83 174 25 116 4.43e-42 159
MS.gene063909.t1 MTR_5g022590 42.633 319 134 8 47 358 11 287 1.51e-73 244
MS.gene063909.t1 MTR_2g100000 33.884 363 188 11 38 365 64 409 2.06e-36 146
MS.gene063909.t1 MTR_3g005610 33.333 285 156 7 434 714 26 280 1.17e-35 137
MS.gene063909.t1 MTR_2g059440 33.218 289 150 10 434 714 26 279 2.74e-32 127
MS.gene063909.t1 MTR_2g059430 30.534 262 120 7 453 714 12 211 3.98e-23 99.4
MS.gene063909.t1 MTR_2g100000 32.056 287 143 11 114 365 2 271 5.94e-18 88.6
MS.gene063909.t1 MTR_8g076800 57.407 54 23 0 146 199 6 59 3.84e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063909.t1 AT1G45130 72.016 729 200 3 3 728 5 732 0.0 1118
MS.gene063909.t1 AT4G36360 70.123 733 213 3 5 733 9 739 0.0 1112
MS.gene063909.t1 AT4G36360 70.123 733 213 3 5 733 9 739 0.0 1111
MS.gene063909.t1 AT1G45130 72.699 641 174 1 89 728 13 653 0.0 998
MS.gene063909.t1 AT3G13750 64.706 731 248 7 9 732 12 739 0.0 989
MS.gene063909.t1 AT4G26140 61.885 711 264 6 20 727 21 727 0.0 942
MS.gene063909.t1 AT3G52840 61.646 717 271 4 11 726 66 779 0.0 941
MS.gene063909.t1 AT3G52840 61.646 717 271 4 11 726 12 725 0.0 939
MS.gene063909.t1 AT4G26140 59.783 736 264 7 20 727 21 752 0.0 928
MS.gene063909.t1 AT5G56870 61.111 720 273 6 10 726 9 724 0.0 920
MS.gene063909.t1 AT4G26140 59.058 701 255 7 20 692 21 717 0.0 875
MS.gene063909.t1 AT2G28470 53.701 743 318 8 1 725 1 735 0.0 821
MS.gene063909.t1 AT2G28470 53.701 743 318 8 1 725 1 735 0.0 821
MS.gene063909.t1 AT2G28470 53.731 737 319 7 3 725 1 729 0.0 820
MS.gene063909.t1 AT2G28470 53.731 737 319 7 3 725 1 729 0.0 820
MS.gene063909.t1 AT4G26140 61.386 606 230 4 20 625 21 622 0.0 798
MS.gene063909.t1 AT4G26140 61.386 606 230 4 20 625 21 622 0.0 798
MS.gene063909.t1 AT4G26140 61.349 608 229 5 20 625 21 624 0.0 797
MS.gene063909.t1 AT2G28470 53.531 708 303 8 1 690 1 700 0.0 773
MS.gene063909.t1 AT5G63810 50.481 727 347 5 11 727 15 738 0.0 755
MS.gene063909.t1 AT2G32810 50.802 748 327 12 9 722 15 755 0.0 746
MS.gene063909.t1 AT2G32810 50.802 748 327 12 9 722 15 755 0.0 745
MS.gene063909.t1 AT4G26140 63.534 532 189 4 20 549 21 549 0.0 729
MS.gene063909.t1 AT4G26140 60.682 557 189 5 20 549 21 574 0.0 714
MS.gene063909.t1 AT4G26140 60.682 557 189 5 20 549 21 574 0.0 714
MS.gene063909.t1 AT5G20710 47.446 744 375 9 1 733 1 739 0.0 706
MS.gene063909.t1 AT5G63800 48.552 725 336 10 6 722 7 702 0.0 677
MS.gene063909.t1 AT1G77410 48.409 723 330 12 8 722 5 692 0.0 660
MS.gene063909.t1 AT1G77410 48.077 728 330 13 8 722 5 697 0.0 655
MS.gene063909.t1 AT1G31740 46.933 701 316 9 28 717 22 677 0.0 650
MS.gene063909.t1 AT2G16730 46.320 693 338 10 27 712 43 708 0.0 636
MS.gene063909.t1 AT4G35010 45.402 696 344 11 25 712 38 705 0.0 623
MS.gene063909.t1 AT4G38590 44.228 667 335 11 58 715 1 639 0.0 568
MS.gene063909.t1 AT4G38590 43.517 671 338 12 54 715 65 703 0.0 555
MS.gene063909.t1 AT1G77410 47.264 603 275 12 128 722 19 586 3.82e-176 521
MS.gene063909.t1 AT1G77410 47.264 603 275 12 128 722 19 586 3.82e-176 521
MS.gene063909.t1 AT5G20710 43.599 539 288 9 206 733 1 534 6.59e-153 458
MS.gene063909.t1 AT2G04060 33.515 367 170 7 293 659 23 315 2.20e-51 186
MS.gene063909.t1 AT1G72990 33.898 354 195 10 38 361 18 362 6.09e-45 171
MS.gene063909.t1 AT1G72990 33.898 354 195 10 38 361 73 417 1.09e-44 171
MS.gene063909.t1 AT1G72990 33.898 354 195 10 38 361 73 417 1.09e-44 171
MS.gene063909.t1 AT1G72990 32.653 343 192 10 49 361 22 355 2.87e-39 154
MS.gene063909.t1 AT2G04062 41.618 173 80 2 28 200 7 158 3.30e-35 131

Find 208 sgRNAs with CRISPR-Local

Find 381 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATAAGGTTTACAGATTT+TGG 0.145312 8.1:+61488745 MS.gene063909:intron
TCCTTCAAATGACTATATTT+TGG 0.162196 8.1:-61489383 None:intergenic
CCTAAACTGGGCTGCAAATA+TGG 0.190750 8.1:+61488309 MS.gene063909:CDS
TGCAATTCCTGCAACTATTC+TGG 0.212314 8.1:+61491513 MS.gene063909:CDS
CAAAGAAGAATTCTAATTTC+TGG 0.218304 8.1:+61487156 MS.gene063909:CDS
CAGAGAAGTTGCACATTTAA+TGG 0.237000 8.1:+61490748 MS.gene063909:CDS
TTATAGACACTTATGTCTTC+TGG 0.248647 8.1:+61487344 MS.gene063909:CDS
GGCTTTGGACCTAGGAAGTA+TGG 0.252554 8.1:+61491422 MS.gene063909:CDS
TTCTAGATTGAGAACGAATA+TGG 0.253847 8.1:+61488247 MS.gene063909:intron
CTGGTCATGCATACCTAAAC+TGG 0.257224 8.1:+61488296 MS.gene063909:CDS
GTTGAACAGGTTGGACTAAA+AGG 0.259985 8.1:+61491185 MS.gene063909:intron
GTTCTTCAAACACTACTATT+AGG 0.264193 8.1:-61492182 None:intergenic
CATACTTCAGGGGTGCTTCT+TGG 0.275672 8.1:-61487192 None:intergenic
AAAAGGAGAGGCTGTGAATT+TGG 0.279573 8.1:+61491202 MS.gene063909:CDS
CAGAAATTAGAATTCTTCTT+TGG 0.285761 8.1:-61487155 None:intergenic
ATCCGTTCTGAAGCTTATTC+CGG 0.289249 8.1:-61487722 None:intergenic
TGAACTGGTCGCTGGTGAAT+TGG 0.296094 8.1:-61488772 None:intergenic
CATACCTGAGAGAGAATTAT+TGG 0.300613 8.1:-61487932 None:intergenic
CCATATTTGCAGCCCAGTTT+AGG 0.306276 8.1:-61488309 None:intergenic
CTAGGCTTATATGGTTTATT+CGG 0.307971 8.1:-61488606 None:intergenic
GAATCCTTGGAAAATTTCTT+TGG 0.309226 8.1:+61492212 MS.gene063909:CDS
AAATGAGTCCTGTCGATTCT+AGG 0.326359 8.1:+61490077 MS.gene063909:CDS
GCTCCAGCATGTAGATTAAC+TGG 0.327345 8.1:-61490772 None:intergenic
CAACCAAGTTGGCACTTTGC+AGG 0.328605 8.1:-61491546 None:intergenic
TTCTTACCATATTCATCAAT+TGG 0.333167 8.1:-61489083 None:intergenic
GTCCACATGCTAGGCTTATA+TGG 0.334733 8.1:-61488615 None:intergenic
GCATAATAAATGGTCTTATC+AGG 0.334788 8.1:+61491073 MS.gene063909:CDS
CAAGCCGGTCACAACTAAAA+TGG 0.339053 8.1:+61491279 MS.gene063909:CDS
AAGGGCCAAGTATGGATAAA+TGG 0.348408 8.1:+61491447 MS.gene063909:CDS
GCTCCCATTGCCCCGCTCTC+TGG 0.348831 8.1:-61488271 None:intergenic
TGCAAATATGGCTGTTGGAT+TGG 0.363301 8.1:+61488321 MS.gene063909:CDS
CAGCGTGACTGTCGGATTGC+CGG 0.369336 8.1:+61490813 MS.gene063909:CDS
AGAGAAGTTGCACATTTAAT+GGG 0.370621 8.1:+61490749 MS.gene063909:CDS
TGAAAAGCTGTTTCAGTCTC+AGG 0.371686 8.1:+61487904 MS.gene063909:CDS
GACAAAGCATCGGAAGATAT+TGG 0.372135 8.1:+61491469 MS.gene063909:CDS
GAGACACCAGCGACTATCTA+TGG 0.372196 8.1:+61490194 MS.gene063909:CDS
TCCGTTCTGAAGCTTATTCC+GGG 0.373173 8.1:-61487721 None:intergenic
AGGATCTGTCGCATAATAAA+TGG 0.374726 8.1:+61491063 MS.gene063909:CDS
GATGCTCCAATTGATGAATA+TGG 0.376118 8.1:+61489077 MS.gene063909:CDS
GATCCTACTGTTACACCATT+AGG 0.383098 8.1:+61489452 MS.gene063909:CDS
AAAGAGCTCACCACAGGATC+CGG 0.390775 8.1:-61488385 None:intergenic
AACATCAAGACCACCATGTT+TGG 0.392980 8.1:-61487323 None:intergenic
TCAAGACCATGGAGCACAAC+TGG 0.398051 8.1:-61491029 None:intergenic
TTCCACTCAGCGCATATATA+AGG 0.400728 8.1:-61487575 None:intergenic
ACCTGCTGAAGTGTTCCTAA+TGG 0.401362 8.1:-61489467 None:intergenic
CACTATGTTTAGGTTTGGTC+AGG 0.404037 8.1:+61489357 MS.gene063909:intron
AAGAACTTGGCGGGAATCCT+TGG 0.405390 8.1:+61492199 MS.gene063909:CDS
AAGGAAGATATGATTTAGTA+AGG 0.409592 8.1:+61487501 MS.gene063909:CDS
TGAGCATGCTTTGGTTTCTT+CGG 0.409709 8.1:+61489430 MS.gene063909:CDS
GCAATCAGGAAGGATGCTTA+TGG 0.413796 8.1:-61489723 None:intergenic
ACTACTATTAGGTTCTTTGT+TGG 0.415891 8.1:-61492171 None:intergenic
GATTGGGAACAGGAGTCCCT+TGG 0.418192 8.1:+61488338 MS.gene063909:CDS
TATAGACACTTATGTCTTCT+GGG 0.418303 8.1:+61487345 MS.gene063909:CDS
ATATGCGCTGAGTGGAACTT+TGG 0.418404 8.1:+61487581 MS.gene063909:CDS
CTACAGATTAATTCATGTAA+TGG 0.419307 8.1:+61488561 MS.gene063909:intron
CTTCTCTAGACGAAAGTTCA+AGG 0.419593 8.1:+61490131 MS.gene063909:CDS
GGGCAACGAACCATTGGCTT+TGG 0.420385 8.1:+61491407 MS.gene063909:CDS
ATGGGGTCTCAGCTAATGAT+TGG 0.421674 8.1:+61491234 MS.gene063909:CDS
GAACTGGTCGCTGGTGAATT+GGG 0.422236 8.1:-61488771 None:intergenic
AACGGATAACGGACCTTTCA+AGG 0.423232 8.1:+61487738 MS.gene063909:CDS
TACATTTGCAGTATTAAATA+CGG 0.423954 8.1:-61489753 None:intergenic
CCGTCCATGTGTTTGCTAAC+GGG 0.424113 8.1:+61490604 MS.gene063909:CDS
CAAGCGATGTGAGCATGCTT+TGG 0.424324 8.1:+61489421 MS.gene063909:CDS
GTATGGGTAAGGGCCAAGTA+TGG 0.425767 8.1:+61491439 MS.gene063909:CDS
GTATTCTCTGCAGGAACTAC+AGG 0.432210 8.1:+61489614 MS.gene063909:CDS
GCAATTCCTGCAACTATTCT+GGG 0.432599 8.1:+61491514 MS.gene063909:CDS
CTGTCGATTCTAGGTTCTCA+TGG 0.435814 8.1:+61490086 MS.gene063909:CDS
GCAAATATGGCTGTTGGATT+GGG 0.435937 8.1:+61488322 MS.gene063909:CDS
GAATGTCCCAGAATAGTTGC+AGG 0.446858 8.1:-61491520 None:intergenic
TTTGTCCATTTATCCATACT+TGG 0.449902 8.1:-61491452 None:intergenic
ACGAATATGGACCAGAGAGC+GGG 0.449957 8.1:+61488260 MS.gene063909:CDS
AATTCACCAGCGACCAGTTC+AGG 0.450278 8.1:+61488774 MS.gene063909:CDS
GGCACATACTTCAACCAAAC+AGG 0.450745 8.1:-61487700 None:intergenic
CAGGCTCATGTATTCTCTGC+AGG 0.451671 8.1:+61489605 MS.gene063909:intron
GCAGACTGCACATTAATGTT+GGG 0.452299 8.1:-61490573 None:intergenic
AATACGGAAGTTATGCAATC+AGG 0.453209 8.1:-61489737 None:intergenic
ACAATGTTGTTACTACTACT+AGG 0.454031 8.1:-61487068 None:intergenic
AGCGGGGCAATGGGAGCTGC+TGG 0.456168 8.1:+61488277 MS.gene063909:CDS
TACCATGGAGGAACCAACTT+TGG 0.460352 8.1:+61489011 MS.gene063909:CDS
TCTAAAGTCTGCTGCTACTG+TGG 0.461055 8.1:+61489664 MS.gene063909:CDS
ATAAGGTCCAATGCGGAGAT+TGG 0.463256 8.1:-61487558 None:intergenic
TGAATTTGGTATCACCCAAT+GGG 0.463630 8.1:+61491216 MS.gene063909:CDS
AGACCTGCAAAGTGCCAACT+TGG 0.468347 8.1:+61491543 MS.gene063909:CDS
AACATTAATGTGCAGTCTGC+AGG 0.468569 8.1:+61490576 MS.gene063909:CDS
TATTGGATGGCTTATGCAAA+GGG 0.471536 8.1:+61491486 MS.gene063909:CDS
TTATTATGCGACAGATCCTT+CGG 0.472013 8.1:-61491059 None:intergenic
ATTAAGGGTATTACATTGCC+AGG 0.472942 8.1:-61487385 None:intergenic
CATTATGAAACATGGGAGAC+GGG 0.475024 8.1:+61490996 MS.gene063909:CDS
ATGGCTGTTGGATTGGGAAC+AGG 0.475126 8.1:+61488328 MS.gene063909:CDS
AGTTGCTCGTTTCATTCAGA+AGG 0.475641 8.1:+61488810 MS.gene063909:CDS
GGACCAGAGAGCGGGGCAAT+GGG 0.481155 8.1:+61488268 MS.gene063909:CDS
CTTTATGCCAATCTCCGCAT+TGG 0.482995 8.1:+61487551 MS.gene063909:CDS
TATGCGCTGAGTGGAACTTT+GGG 0.484699 8.1:+61487582 MS.gene063909:CDS
TGCAGACTGCACATTAATGT+TGG 0.486330 8.1:-61490574 None:intergenic
GAACCATTGGCTTTGGACCT+AGG 0.487914 8.1:+61491414 MS.gene063909:CDS
AGTTCAAGGATTACAGCTGC+TGG 0.488592 8.1:+61490145 MS.gene063909:CDS
GGTGTAGAGGAATTCCTGTT+TGG 0.489840 8.1:+61487686 MS.gene063909:intron
CAATGTTGTTACTACTACTA+GGG 0.491765 8.1:-61487067 None:intergenic
AGAAAGTCTCTTCTCATCAA+TGG 0.493105 8.1:+61487132 MS.gene063909:CDS
GCAAATGCTAGATCCTGAAC+TGG 0.493575 8.1:-61488787 None:intergenic
TCATAGCTTGTAGTAATGAA+TGG 0.494227 8.1:-61489050 None:intergenic
ATTGGGAACAGGAGTCCCTT+GGG 0.494679 8.1:+61488339 MS.gene063909:CDS
ACATGGGAGACGGGGATCAC+TGG 0.494793 8.1:+61491005 MS.gene063909:CDS
ACTGGTCCAGTTGTGCTCCA+TGG 0.498783 8.1:+61491023 MS.gene063909:CDS
AGAAGATAGATCTTCATCAT+AGG 0.502038 8.1:-61490113 None:intergenic
TGGTCCAATAATTCTCTCTC+AGG 0.502761 8.1:+61487928 MS.gene063909:CDS
GCCAATGGTTCGTTGCCCTC+AGG 0.502891 8.1:-61491402 None:intergenic
ACCAACTTTGGACGATCAGC+TGG 0.503084 8.1:+61489023 MS.gene063909:CDS
TGGGTTTAGGCTGCAATGCA+AGG 0.504866 8.1:+61487848 MS.gene063909:intron
TCATTAGCTGAGACCCCATT+GGG 0.506426 8.1:-61491230 None:intergenic
GGCCCTTACCCATACTTCCT+AGG 0.508915 8.1:-61491431 None:intergenic
TGGACCAGAGAGCGGGGCAA+TGG 0.509550 8.1:+61488267 MS.gene063909:CDS
GATGTTCATGAACCATCTCC+TGG 0.509570 8.1:+61487367 MS.gene063909:CDS
ATAGTAGTGTTTGAAGAACT+TGG 0.510118 8.1:+61492186 MS.gene063909:CDS
GGACCTAGGAAGTATGGGTA+AGG 0.511953 8.1:+61491428 MS.gene063909:CDS
GCCTGAGGGCAACGAACCAT+TGG 0.512441 8.1:+61491401 MS.gene063909:CDS
AAGGGTCGGCATTTGGGACG+AGG 0.513971 8.1:+61490722 MS.gene063909:intron
GTTGGCTTTAGCCATGACCT+TGG 0.514639 8.1:-61492153 None:intergenic
GGTATTACATTGCCAGGAGA+TGG 0.515365 8.1:-61487379 None:intergenic
AAGAGCTCACCACAGGATCC+GGG 0.516437 8.1:-61488384 None:intergenic
CTAGCATGTGGACGGAGTCT+TGG 0.516868 8.1:+61488625 MS.gene063909:CDS
GCCGTCCATGTGTTTGCTAA+CGG 0.518416 8.1:+61490603 MS.gene063909:CDS
TGGGGTCTCAGCTAATGATT+GGG 0.518992 8.1:+61491235 MS.gene063909:CDS
ATAAGCTTCAGAACGGATAA+CGG 0.519465 8.1:+61487727 MS.gene063909:CDS
ACCATTAGGAACACTTCAGC+AGG 0.524150 8.1:+61489466 MS.gene063909:CDS
ATCATTAGCTGAGACCCCAT+TGG 0.526712 8.1:-61491231 None:intergenic
GGCACTATGACTTGCCTCCA+TGG 0.528134 8.1:+61489699 MS.gene063909:CDS
GCCAAAATATAGTCATTTGA+AGG 0.528138 8.1:+61489382 MS.gene063909:CDS
CAAGACTCCGTCCACATGCT+AGG 0.528557 8.1:-61488624 None:intergenic
GGTGCTTCTTGGATAGTGAA+TGG 0.529489 8.1:-61487181 None:intergenic
GTGAATTTGGTATCACCCAA+TGG 0.529765 8.1:+61491215 MS.gene063909:CDS
TCTCCCATGTTTCATAATGC+CGG 0.531452 8.1:-61490992 None:intergenic
GCGACAGATCCTTCGGTCCA+TGG 0.535103 8.1:-61491052 None:intergenic
TGGGCTGCAAATATGGCTGT+TGG 0.538441 8.1:+61488316 MS.gene063909:CDS
TAGTGTTTGAAGAACTTGGC+GGG 0.545727 8.1:+61492190 MS.gene063909:CDS
GCAAAGTGCCAACTTGGTTG+TGG 0.547646 8.1:+61491549 MS.gene063909:CDS
ACCAGCTGATCGTCCAAAGT+TGG 0.553003 8.1:-61489024 None:intergenic
AAAATTGTACCATCTTTGAG+TGG 0.553803 8.1:-61491577 None:intergenic
GGGCCAGTTAATCTACATGC+TGG 0.558839 8.1:+61490769 MS.gene063909:CDS
TTTATTGGAAGAACGTTGGC+CGG 0.559033 8.1:+61490973 MS.gene063909:intron
GCTCTTCTCAGCGTGACTGT+CGG 0.563832 8.1:+61490805 MS.gene063909:CDS
GCATTATGAAACATGGGAGA+CGG 0.564815 8.1:+61490995 MS.gene063909:CDS
CATGAGAACCTAGAATCGAC+AGG 0.568957 8.1:-61490085 None:intergenic
GGACGGAGTCTTGGAGTGGC+TGG 0.569999 8.1:+61488634 MS.gene063909:CDS
GTTCCTAATGGTGTAACAGT+AGG 0.571055 8.1:-61489455 None:intergenic
GGTATCATGTTCCAAGGTCA+TGG 0.571810 8.1:+61492142 MS.gene063909:intron
AAATTGTACCATCTTTGAGT+GGG 0.574497 8.1:-61491576 None:intergenic
GCTCGTTTCATTCAGAAGGG+TGG 0.575864 8.1:+61488814 MS.gene063909:CDS
CTAGATCCTGAACTGGTCGC+TGG 0.577176 8.1:-61488780 None:intergenic
TATGTACCATAGATAGTCGC+TGG 0.579264 8.1:-61490200 None:intergenic
TCATCAGAATCATTTCTTCG+AGG 0.581779 8.1:+61490540 MS.gene063909:CDS
GTGCTCCATGGTCTTGACCA+TGG 0.585112 8.1:+61491035 MS.gene063909:CDS
GCTTTGGACCTAGGAAGTAT+GGG 0.586075 8.1:+61491423 MS.gene063909:CDS
GTCCAAAGTTGGTTCCTCCA+TGG 0.588793 8.1:-61489013 None:intergenic
GTTGCTCGTTTCATTCAGAA+GGG 0.589466 8.1:+61488811 MS.gene063909:CDS
ATATTGGATGGCTTATGCAA+AGG 0.589804 8.1:+61491485 MS.gene063909:CDS
TGGTGTCTCTTGTAACATTG+AGG 0.590267 8.1:-61490180 None:intergenic
TCAGAATCATTTCTTCGAGG+AGG 0.593391 8.1:+61490543 MS.gene063909:CDS
TTGGCCGGCATTATGAAACA+TGG 0.593559 8.1:+61490988 MS.gene063909:CDS
TCGGTCCATGGTCAAGACCA+TGG 0.594522 8.1:-61491040 None:intergenic
AGTCCCTTGGGTGATGTGCA+AGG 0.594773 8.1:+61488351 MS.gene063909:CDS
GTGGACAACCCACTCAAAGA+TGG 0.595248 8.1:+61491568 MS.gene063909:CDS
GTTTGGTTGAAGTATGTGCC+CGG 0.595819 8.1:+61487703 MS.gene063909:CDS
TGGATAAATGGACAAAGCAT+CGG 0.600376 8.1:+61491459 MS.gene063909:CDS
TGTCGATTCTAGGTTCTCAT+GGG 0.600914 8.1:+61490087 MS.gene063909:CDS
TGGTCTTGACCATGGACCGA+AGG 0.602007 8.1:+61491043 MS.gene063909:CDS
GTGCAAGGAAAATGATGCCC+CGG 0.603150 8.1:+61488366 MS.gene063909:CDS
ATTCACTAGCTACTCCAAGC+CGG 0.607564 8.1:+61491264 MS.gene063909:CDS
CTTCCTAGGTCCAAAGCCAA+TGG 0.611721 8.1:-61491417 None:intergenic
GTCGCAGGTATCATGTTCCA+AGG 0.612046 8.1:+61492136 MS.gene063909:intron
ACTATCTATGGTACATAACC+AGG 0.614868 8.1:+61490206 MS.gene063909:CDS
GGAAGGATGCTTATGGACCA+TGG 0.616757 8.1:-61489716 None:intergenic
CTAATTAAGAAAGCCAAACA+TGG 0.617287 8.1:+61487310 MS.gene063909:CDS
CCCGTTAGCAAACACATGGA+CGG 0.620558 8.1:-61490604 None:intergenic
CGAATATGGACCAGAGAGCG+GGG 0.624874 8.1:+61488261 MS.gene063909:CDS
AACGAATATGGACCAGAGAG+CGG 0.624993 8.1:+61488259 MS.gene063909:CDS
GACCTAGGAAGTATGGGTAA+GGG 0.625201 8.1:+61491429 MS.gene063909:CDS
AAGCATCGGAAGATATTGGA+TGG 0.626602 8.1:+61491473 MS.gene063909:CDS
TATGATAAATTATAGTACCA+TGG 0.626716 8.1:+61488996 MS.gene063909:intron
TGGGTTGTCCACAACCAAGT+TGG 0.630478 8.1:-61491557 None:intergenic
TTTCCTTGCACATCACCCAA+GGG 0.630779 8.1:-61488354 None:intergenic
AGAGCTCACCACAGGATCCG+GGG 0.631333 8.1:-61488383 None:intergenic
GAAAAGCTGTTTCAGTCTCA+GGG 0.631820 8.1:+61487905 MS.gene063909:CDS
ATTATGAAACATGGGAGACG+GGG 0.632158 8.1:+61490997 MS.gene063909:CDS
CTCATATGTGAATTACTACA+TGG 0.632328 8.1:+61488837 MS.gene063909:CDS
CGGAAGTTATGCAATCAGGA+AGG 0.637295 8.1:-61489733 None:intergenic
TGGTCATGCATACCTAAACT+GGG 0.638626 8.1:+61488297 MS.gene063909:CDS
AACTTTGGACGATCAGCTGG+TGG 0.640845 8.1:+61489026 MS.gene063909:CDS
GTCACAACTAAAATGGTACA+AGG 0.642717 8.1:+61491286 MS.gene063909:CDS
AACCATATAAGCCTAGCATG+TGG 0.643949 8.1:+61488613 MS.gene063909:CDS
GTAGTGTTTGAAGAACTTGG+CGG 0.651378 8.1:+61492189 MS.gene063909:CDS
ATATAAGCCTAGCATGTGGA+CGG 0.652636 8.1:+61488617 MS.gene063909:CDS
GACCTTATATATGCGCTGAG+TGG 0.656602 8.1:+61487573 MS.gene063909:CDS
AAATGATGCCCCGGATCCTG+TGG 0.661573 8.1:+61488375 MS.gene063909:CDS
GCCCGGAATAAGCTTCAGAA+CGG 0.662264 8.1:+61487720 MS.gene063909:CDS
ATTGCCCGTTAGCAAACACA+TGG 0.666309 8.1:-61490608 None:intergenic
TGGCCGGCATTATGAAACAT+GGG 0.670492 8.1:+61490989 MS.gene063909:CDS
TTGAGTTCACTAACGAGCTG+CGG 0.670744 8.1:-61492256 None:intergenic
GGTGGGAACTCAAACGTCAG+TGG 0.672709 8.1:+61490051 MS.gene063909:intron
CGCATATATAAGGTCCAATG+CGG 0.688851 8.1:-61487565 None:intergenic
CAATTGCAAACATACTTCAG+GGG 0.689900 8.1:-61487202 None:intergenic
ATTAAGAAAGCCAAACATGG+TGG 0.693632 8.1:+61487313 MS.gene063909:CDS
ATGTGGACGGAGTCTTGGAG+TGG 0.699415 8.1:+61488630 MS.gene063909:CDS
ACAGGTTGGACTAAAAGGAG+AGG 0.707740 8.1:+61491190 MS.gene063909:intron
GAATTTGGTATCACCCAATG+GGG 0.708312 8.1:+61491217 MS.gene063909:CDS
GATAAATTATAGTACCATGG+AGG 0.734146 8.1:+61488999 MS.gene063909:intron
AAGCTGTTTCAGTCTCAGGG+TGG 0.745842 8.1:+61487908 MS.gene063909:CDS
AGGATGCTTATGGACCATGG+AGG 0.806726 8.1:-61489713 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTATCAATATTTCAAAA+TGG + chr8.1:61491712-61491731 MS.gene063909:intron 10.0%
!!! TTTACAATTTTATTCTTTAA+TGG + chr8.1:61487665-61487684 MS.gene063909:intron 10.0%
!! AAAAAGGAATGAAATTAAAA+TGG - chr8.1:61487628-61487647 None:intergenic 15.0%
!! AATATAGGAATAAATTATGA+TGG - chr8.1:61489975-61489994 None:intergenic 15.0%
!!! ATGATATTAATTTGATAACA+TGG - chr8.1:61491836-61491855 None:intergenic 15.0%
!!! TATATTTTTTTTTTGGGTTT+AGG + chr8.1:61487835-61487854 MS.gene063909:intron 15.0%
!!! TCTTTGATTTTATGATAATT+TGG + chr8.1:61487770-61487789 MS.gene063909:intron 15.0%
!!! TGATATTAATTTGATAACAT+GGG - chr8.1:61491835-61491854 None:intergenic 15.0%
!!! TTGAAATATTGATAATATGA+GGG - chr8.1:61491710-61491729 None:intergenic 15.0%
!!! TTTGAAATATTGATAATATG+AGG - chr8.1:61491711-61491730 None:intergenic 15.0%
!! AATAATAATATTAGTGGCAT+TGG - chr8.1:61492050-61492069 None:intergenic 20.0%
!! ACTATTACATCACATTTAAA+TGG - chr8.1:61489949-61489968 None:intergenic 20.0%
!! ACTCAATAAGTATATAATGA+TGG - chr8.1:61488514-61488533 None:intergenic 20.0%
!! CACAACAAAATTACATAAAA+AGG - chr8.1:61487644-61487663 None:intergenic 20.0%
!! CAGAAGAATAATAATATTAG+TGG - chr8.1:61492056-61492075 None:intergenic 20.0%
!! CTGAAAAATAAATTCATAGA+AGG - chr8.1:61488873-61488892 None:intergenic 20.0%
!! GGTACTATAATTTATCATAA+CGG - chr8.1:61488995-61489014 None:intergenic 20.0%
!! TACATTTGCAGTATTAAATA+CGG - chr8.1:61489756-61489775 None:intergenic 20.0%
!! TATAATTTCAATGACCAAAT+TGG + chr8.1:61491961-61491980 MS.gene063909:intron 20.0%
!! TATGATAAATTATAGTACCA+TGG + chr8.1:61488996-61489015 MS.gene063909:intron 20.0%
!! TGACTTTAACTATTTGAATA+AGG + chr8.1:61488904-61488923 MS.gene063909:intron 20.0%
!! TGATATATATTTATACAGGT+GGG + chr8.1:61490034-61490053 MS.gene063909:intron 20.0%
!! TTTAATCAACATAGCTTAAA+AGG - chr8.1:61489795-61489814 None:intergenic 20.0%
!!! AACATTGTTTGTTTTGTTTT+TGG + chr8.1:61487083-61487102 MS.gene063909:CDS 20.0%
!!! GATATTAATTTGATAACATG+GGG - chr8.1:61491834-61491853 None:intergenic 20.0%
!!! TTGTTTTTCTGATTATGTAT+GGG + chr8.1:61487457-61487476 MS.gene063909:intron 20.0%
!!! TTTATGATAATTTGGTTTCT+CGG + chr8.1:61487778-61487797 MS.gene063909:intron 20.0%
!!! TTTATGTTAAAGCATTATTG+CGG + chr8.1:61489540-61489559 MS.gene063909:intron 20.0%
!!! TTTCAAATGTTACTGTTTTT+TGG + chr8.1:61490490-61490509 MS.gene063909:intron 20.0%
!!! TTTCTAGTTTGTATCTATTT+TGG - chr8.1:61489857-61489876 None:intergenic 20.0%
! AACGTTCTTCCAATAAAAAA+TGG - chr8.1:61490970-61490989 None:intergenic 25.0%
! AAGAAAAATTCAACCTTGAA+AGG - chr8.1:61487754-61487773 None:intergenic 25.0%
! AAGGAAGATATGATTTAGTA+AGG + chr8.1:61487501-61487520 MS.gene063909:CDS 25.0%
! AATCTGAAAGATGCTTAAAA+TGG - chr8.1:61490420-61490439 None:intergenic 25.0%
! AATGATTCCTAAAGTTGAAA+AGG - chr8.1:61491901-61491920 None:intergenic 25.0%
! ATCTTGAAGTAGTAATTTGA+TGG - chr8.1:61488045-61488064 None:intergenic 25.0%
! ATTAAGACAATGCAAAAAGT+GGG + chr8.1:61487527-61487546 MS.gene063909:CDS 25.0%
! ATTAATTCTGAGTTAACTGA+AGG + chr8.1:61490683-61490702 MS.gene063909:intron 25.0%
! ATTATTCTTCTGTATACAAG+AGG + chr8.1:61492064-61492083 MS.gene063909:intron 25.0%
! CAAAGAAGAATTCTAATTTC+TGG + chr8.1:61487156-61487175 MS.gene063909:CDS 25.0%
! CAAATAATTGATTGATGCAA+AGG - chr8.1:61490007-61490026 None:intergenic 25.0%
! CAGAAATTAGAATTCTTCTT+TGG - chr8.1:61487158-61487177 None:intergenic 25.0%
! CTACAGATTAATTCATGTAA+TGG + chr8.1:61488561-61488580 MS.gene063909:intron 25.0%
! CTGATATATATTTATACAGG+TGG + chr8.1:61490033-61490052 MS.gene063909:intron 25.0%
! GGACTGATATATATTTATAC+AGG + chr8.1:61490030-61490049 MS.gene063909:intron 25.0%
! TAAAGTTGAAAAGGTTAATC+AGG - chr8.1:61491892-61491911 None:intergenic 25.0%
! TATCAAAGCAATAATTTCCT+AGG + chr8.1:61490315-61490334 MS.gene063909:intron 25.0%
! TATCTGATCTACAAAACAAT+AGG - chr8.1:61488073-61488092 None:intergenic 25.0%
! TATTAAGACAATGCAAAAAG+TGG + chr8.1:61487526-61487545 MS.gene063909:CDS 25.0%
! TTACATGAATTAATCTGTAG+TGG - chr8.1:61488561-61488580 None:intergenic 25.0%
! TTCTTACCATATTCATCAAT+TGG - chr8.1:61489086-61489105 None:intergenic 25.0%
! TTTATTCTTTAATGGTGTAG+AGG + chr8.1:61487673-61487692 MS.gene063909:intron 25.0%
! TTTGTTTGTTTAGGAAAATG+TGG + chr8.1:61491634-61491653 MS.gene063909:intron 25.0%
!! AGTTTTCGTAATTCATTTGA+TGG - chr8.1:61490276-61490295 None:intergenic 25.0%
!! ATCATAAGGTTTACAGATTT+TGG + chr8.1:61488745-61488764 MS.gene063909:intron 25.0%
!! CAAATGTAAGAATATTTTGC+AGG + chr8.1:61489768-61489787 MS.gene063909:intron 25.0%
!! TCCTTCAAATGACTATATTT+TGG - chr8.1:61489386-61489405 None:intergenic 25.0%
!! TGATTAACCTTTTCAACTTT+AGG + chr8.1:61491891-61491910 MS.gene063909:intron 25.0%
!!! AAATGTGTGATTTTTAGATG+TGG + chr8.1:61487281-61487300 MS.gene063909:intron 25.0%
!!! AAATGTTACTGTTTTTTGGT+TGG + chr8.1:61490494-61490513 MS.gene063909:intron 25.0%
!!! AATGTGTGATTTTTAGATGT+GGG + chr8.1:61487282-61487301 MS.gene063909:intron 25.0%
!!! ATGATAATGACACGTTATTT+TGG + chr8.1:61492008-61492027 MS.gene063909:intron 25.0%
!!! ATTTTGGAATATTGATGATG+TGG + chr8.1:61491918-61491937 MS.gene063909:intron 25.0%
!!! ATTTTTTATTGGAAGAACGT+TGG + chr8.1:61490969-61490988 MS.gene063909:intron 25.0%
!!! GTTGTTTTTCTGATTATGTA+TGG + chr8.1:61487456-61487475 MS.gene063909:intron 25.0%
!!! TAATTTATCATAACGGACAA+AGG - chr8.1:61488988-61489007 None:intergenic 25.0%
!!! TGATAATGACACGTTATTTT+GGG + chr8.1:61492009-61492028 MS.gene063909:intron 25.0%
!!! TTACTCTTGCCATTTTTTAT+TGG + chr8.1:61490958-61490977 MS.gene063909:intron 25.0%
!!! TTCAACTTTAGGAATCATTT+TGG + chr8.1:61491902-61491921 MS.gene063909:intron 25.0%
!!! TTCAAGTTGGATTTAGAATA+TGG - chr8.1:61490852-61490871 None:intergenic 25.0%
AAAATTGTACCATCTTTGAG+TGG - chr8.1:61491580-61491599 None:intergenic 30.0%
AAAGGGCTTCATGAAAATTA+AGG - chr8.1:61487404-61487423 None:intergenic 30.0%
AAATTGTACCATCTTTGAGT+GGG - chr8.1:61491579-61491598 None:intergenic 30.0%
AACAAGCAAAGAACTAGAAA+AGG - chr8.1:61489522-61489541 None:intergenic 30.0%
AAGGGCTTCATGAAAATTAA+GGG - chr8.1:61487403-61487422 None:intergenic 30.0%
ACAAGCAAAGAACTAGAAAA+GGG - chr8.1:61489521-61489540 None:intergenic 30.0%
ACAATGTTGTTACTACTACT+AGG - chr8.1:61487071-61487090 None:intergenic 30.0%
ACTACTATTAGGTTCTTTGT+TGG - chr8.1:61492174-61492193 None:intergenic 30.0%
AGAAGATAGATCTTCATCAT+AGG - chr8.1:61490116-61490135 None:intergenic 30.0%
AGAGAAGTTGCACATTTAAT+GGG + chr8.1:61490749-61490768 MS.gene063909:CDS 30.0%
AGTAGAATATGTTGTTGAAC+AGG + chr8.1:61491172-61491191 MS.gene063909:intron 30.0%
ATAGTAGTGTTTGAAGAACT+TGG + chr8.1:61492186-61492205 MS.gene063909:CDS 30.0%
ATATGGTATTAAGCACTAAC+CGG - chr8.1:61490835-61490854 None:intergenic 30.0%
ATCTGTAAACCTTATGATCA+TGG - chr8.1:61488743-61488762 None:intergenic 30.0%
ATGTTTACAAGTGTTCTGTT+TGG + chr8.1:61492107-61492126 MS.gene063909:intron 30.0%
ATTATATCACTCATCTTACC+TGG - chr8.1:61490227-61490246 None:intergenic 30.0%
CAAATTTCTTCTGCTTGAAT+TGG - chr8.1:61490363-61490382 None:intergenic 30.0%
CAATGTTGTTACTACTACTA+GGG - chr8.1:61487070-61487089 None:intergenic 30.0%
CCTAAACAAACAAAGAAGTA+AGG - chr8.1:61491628-61491647 None:intergenic 30.0%
CTAATTAAGAAAGCCAAACA+TGG + chr8.1:61487310-61487329 MS.gene063909:CDS 30.0%
CTAGGCTTATATGGTTTATT+CGG - chr8.1:61488609-61488628 None:intergenic 30.0%
CTCATATGTGAATTACTACA+TGG + chr8.1:61488837-61488856 MS.gene063909:CDS 30.0%
CTTATGTTTCATCTACTTCT+AGG - chr8.1:61488004-61488023 None:intergenic 30.0%
GAATCCTTGGAAAATTTCTT+TGG + chr8.1:61492212-61492231 MS.gene063909:CDS 30.0%
GAGTCTCAAGTTCTATATTT+AGG + chr8.1:61488484-61488503 MS.gene063909:intron 30.0%
GATAAATTATAGTACCATGG+AGG + chr8.1:61488999-61489018 MS.gene063909:intron 30.0%
GCATCAATCAATTATTTGAC+TGG + chr8.1:61490009-61490028 MS.gene063909:intron 30.0%
GCCAAAATATAGTCATTTGA+AGG + chr8.1:61489382-61489401 MS.gene063909:CDS 30.0%
GTTCTTCAAACACTACTATT+AGG - chr8.1:61492185-61492204 None:intergenic 30.0%
TATAGACACTTATGTCTTCT+GGG + chr8.1:61487345-61487364 MS.gene063909:CDS 30.0%
TATGTCGCAAATATCCAATT+TGG - chr8.1:61491978-61491997 None:intergenic 30.0%
TATGTGAATTACTACATGGT+TGG + chr8.1:61488841-61488860 MS.gene063909:intron 30.0%
TGATTCACTGAGAATTTGAA+TGG + chr8.1:61489152-61489171 MS.gene063909:intron 30.0%
TTAAGACAATGCAAAAAGTG+GGG + chr8.1:61487528-61487547 MS.gene063909:CDS 30.0%
TTATAGACACTTATGTCTTC+TGG + chr8.1:61487344-61487363 MS.gene063909:CDS 30.0%
TTCTAGATTGAGAACGAATA+TGG + chr8.1:61488247-61488266 MS.gene063909:intron 30.0%
TTCTATTCTCCATGATCATA+AGG + chr8.1:61488731-61488750 MS.gene063909:intron 30.0%
TTTGTCCATTTATCCATACT+TGG - chr8.1:61491455-61491474 None:intergenic 30.0%
! AGAGAGATCAGAAGTATAAA+AGG - chr8.1:61488709-61488728 None:intergenic 30.0%
! ATAAGGTTTACAGATTTTGG+TGG + chr8.1:61488748-61488767 MS.gene063909:intron 30.0%
! ATTAATCTGTAGTGGAGAAT+TGG - chr8.1:61488553-61488572 None:intergenic 30.0%
! CCTTACTTCTTTGTTTGTTT+AGG + chr8.1:61491625-61491644 MS.gene063909:intron 30.0%
! CTACTGTGGTTTTCAATAAT+AGG + chr8.1:61489678-61489697 MS.gene063909:CDS 30.0%
! GAGAGATCAGAAGTATAAAA+GGG - chr8.1:61488708-61488727 None:intergenic 30.0%
! TAAAAGCTCTCTTTTTGTTC+AGG - chr8.1:61489324-61489343 None:intergenic 30.0%
! TCATAGCTTGTAGTAATGAA+TGG - chr8.1:61489053-61489072 None:intergenic 30.0%
! TTCACCAAAGAAATTTTCCA+AGG - chr8.1:61492219-61492238 None:intergenic 30.0%
! TTTTGTTGCAAGAAAACATG+TGG + chr8.1:61488936-61488955 MS.gene063909:intron 30.0%
!! ACTGATTTCTTTTAAAGGGT+CGG + chr8.1:61490708-61490727 MS.gene063909:intron 30.0%
!! AGGTGACTGATTTCTTTTAA+AGG + chr8.1:61490703-61490722 MS.gene063909:intron 30.0%
!! ATATTGATGATGTGGATACT+AGG + chr8.1:61491926-61491945 MS.gene063909:intron 30.0%
!! GCATAATAAATGGTCTTATC+AGG + chr8.1:61491073-61491092 MS.gene063909:CDS 30.0%
!! GGTGACTGATTTCTTTTAAA+GGG + chr8.1:61490704-61490723 MS.gene063909:intron 30.0%
AAGCACATACAGAGAGAATA+AGG - chr8.1:61489575-61489594 None:intergenic 35.0%
AATACGGAAGTTATGCAATC+AGG - chr8.1:61489740-61489759 None:intergenic 35.0%
AATATCGAAGAATCTGCTTC+TGG - chr8.1:61489120-61489139 None:intergenic 35.0%
AATTCAATCAGTGACAAGCA+AGG - chr8.1:61490926-61490945 None:intergenic 35.0%
ACTATCTATGGTACATAACC+AGG + chr8.1:61490206-61490225 MS.gene063909:CDS 35.0%
AGAAAGTCTCTTCTCATCAA+TGG + chr8.1:61487132-61487151 MS.gene063909:CDS 35.0%
AGGATCTGTCGCATAATAAA+TGG + chr8.1:61491063-61491082 MS.gene063909:CDS 35.0%
ATAAGCTTCAGAACGGATAA+CGG + chr8.1:61487727-61487746 MS.gene063909:CDS 35.0%
ATATTGGATGGCTTATGCAA+AGG + chr8.1:61491485-61491504 MS.gene063909:CDS 35.0%
ATTAAGAAAGCCAAACATGG+TGG + chr8.1:61487313-61487332 MS.gene063909:CDS 35.0%
ATTGATTGATGCAAAGGACA+AGG - chr8.1:61490001-61490020 None:intergenic 35.0%
CAAAGCAATAATTTCCTAGG+CGG + chr8.1:61490318-61490337 MS.gene063909:intron 35.0%
CAAAGGACAAGGCTTAATAT+AGG - chr8.1:61489990-61490009 None:intergenic 35.0%
CAAGAATCAACTCAACTTGA+GGG - chr8.1:61489245-61489264 None:intergenic 35.0%
CAATTGCAAACATACTTCAG+GGG - chr8.1:61487205-61487224 None:intergenic 35.0%
CAGAGAAGTTGCACATTTAA+TGG + chr8.1:61490748-61490767 MS.gene063909:CDS 35.0%
CATACCTGAGAGAGAATTAT+TGG - chr8.1:61487935-61487954 None:intergenic 35.0%
GAATATGTTGTTGAACAGGT+TGG + chr8.1:61491176-61491195 MS.gene063909:intron 35.0%
GATAATATGAGGGACTAGAT+TGG - chr8.1:61491700-61491719 None:intergenic 35.0%
GATGCTCCAATTGATGAATA+TGG + chr8.1:61489077-61489096 MS.gene063909:CDS 35.0%
GCAATTGCAAACATACTTCA+GGG - chr8.1:61487206-61487225 None:intergenic 35.0%
GGTCAAGTACAGGAATTTAT+TGG - chr8.1:61490399-61490418 None:intergenic 35.0%
GTCACAACTAAAATGGTACA+AGG + chr8.1:61491286-61491305 MS.gene063909:CDS 35.0%
TATTGGATGGCTTATGCAAA+GGG + chr8.1:61491486-61491505 MS.gene063909:CDS 35.0%
TCATCAGAATCATTTCTTCG+AGG + chr8.1:61490540-61490559 MS.gene063909:CDS 35.0%
TGAAATGTTGAGAACTGAGA+AGG - chr8.1:61490475-61490494 None:intergenic 35.0%
TGAATTTGGTATCACCCAAT+GGG + chr8.1:61491216-61491235 MS.gene063909:CDS 35.0%
TGATAACAGGTCAAAACAGA+GGG - chr8.1:61491771-61491790 None:intergenic 35.0%
TGCAATTGCAAACATACTTC+AGG - chr8.1:61487207-61487226 None:intergenic 35.0%
TGCTTAAAATGGTCAAGTAC+AGG - chr8.1:61490409-61490428 None:intergenic 35.0%
TGGATAAATGGACAAAGCAT+CGG + chr8.1:61491459-61491478 MS.gene063909:CDS 35.0%
TGTGGAGTAAATACTCAAGT+TGG + chr8.1:61491652-61491671 MS.gene063909:intron 35.0%
TTATTATGCGACAGATCCTT+CGG - chr8.1:61491062-61491081 None:intergenic 35.0%
TTATTCTCTCTGTATGTGCT+TGG + chr8.1:61489574-61489593 MS.gene063909:intron 35.0%
TTGAATGTGTGCGTAATTGA+AGG + chr8.1:61487965-61487984 MS.gene063909:intron 35.0%
TTGAGCACTTCACTATGTTT+AGG + chr8.1:61489347-61489366 MS.gene063909:intron 35.0%
! AATATTAGTGGCATTGGATC+TGG - chr8.1:61492044-61492063 None:intergenic 35.0%
! CACTTCACTATGTTTAGGTT+TGG + chr8.1:61489352-61489371 MS.gene063909:intron 35.0%
! GCATTGCAGTACAATTTTGA+AGG + chr8.1:61487482-61487501 MS.gene063909:intron 35.0%
! GCTTTTCACTCTTCATCATT+TGG - chr8.1:61487892-61487911 None:intergenic 35.0%
! TCAGAGATGCATTTGATAAC+AGG - chr8.1:61491784-61491803 None:intergenic 35.0%
! TTGATAACAGGTCAAAACAG+AGG - chr8.1:61491772-61491791 None:intergenic 35.0%
!! AACTTTCTTTAAGACCACTC+AGG - chr8.1:61489281-61489300 None:intergenic 35.0%
!! ACGAAAACTTTTTGAGCTGT+TGG + chr8.1:61490287-61490306 MS.gene063909:intron 35.0%
!! ACTTTCTTTAAGACCACTCA+GGG - chr8.1:61489280-61489299 None:intergenic 35.0%
!! ATTAAGGGTATTACATTGCC+AGG - chr8.1:61487388-61487407 None:intergenic 35.0%
!! ATTTGGTTTCTCGGTTTTGA+CGG + chr8.1:61487787-61487806 MS.gene063909:intron 35.0%
!! TTTGCTAACGGGCAATTTTT+AGG + chr8.1:61490615-61490634 MS.gene063909:CDS 35.0%
!!! TGTACCATTTTAGTTGTGAC+CGG - chr8.1:61491286-61491305 None:intergenic 35.0%
AAAAGGAGAGGCTGTGAATT+TGG + chr8.1:61491202-61491221 MS.gene063909:CDS 40.0%
AACATCAAGACCACCATGTT+TGG - chr8.1:61487326-61487345 None:intergenic 40.0%
AACATTAATGTGCAGTCTGC+AGG + chr8.1:61490576-61490595 MS.gene063909:CDS 40.0%
AACCATATAAGCCTAGCATG+TGG + chr8.1:61488613-61488632 MS.gene063909:CDS 40.0%
AAGGGCCAAGTATGGATAAA+TGG + chr8.1:61491447-61491466 MS.gene063909:CDS 40.0%
ACGGACAAAGGTGAAACTTA+AGG - chr8.1:61488976-61488995 None:intergenic 40.0%
ACTGTAGCAAAGGTAAGAGA+GGG - chr8.1:61488143-61488162 None:intergenic 40.0%
AGTTGCTCGTTTCATTCAGA+AGG + chr8.1:61488810-61488829 MS.gene063909:CDS 40.0%
ATATAAGCCTAGCATGTGGA+CGG + chr8.1:61488617-61488636 MS.gene063909:CDS 40.0%
ATGTACGTAGACTGTAGCAA+AGG - chr8.1:61488153-61488172 None:intergenic 40.0%
ATGTTGAGAACTGAGAAGGT+AGG - chr8.1:61490471-61490490 None:intergenic 40.0%
ATTATGAAACATGGGAGACG+GGG + chr8.1:61490997-61491016 MS.gene063909:CDS 40.0%
CAAGGTAAGAGCAGTTTACT+AGG + chr8.1:61491304-61491323 MS.gene063909:intron 40.0%
CATTATGAAACATGGGAGAC+GGG + chr8.1:61490996-61491015 MS.gene063909:CDS 40.0%
CCAAGAATCAACTCAACTTG+AGG - chr8.1:61489246-61489265 None:intergenic 40.0%
CGCACACATTCAAAAGAGAA+AGG - chr8.1:61487958-61487977 None:intergenic 40.0%
CGCATATATAAGGTCCAATG+CGG - chr8.1:61487568-61487587 None:intergenic 40.0%
CTGAATGCTCAAGTTCAAGT+TGG - chr8.1:61490865-61490884 None:intergenic 40.0%
CTTCTCTAGACGAAAGTTCA+AGG + chr8.1:61490131-61490150 MS.gene063909:CDS 40.0%
GAATTTGGTATCACCCAATG+GGG + chr8.1:61491217-61491236 MS.gene063909:CDS 40.0%
GATCCTACTGTTACACCATT+AGG + chr8.1:61489452-61489471 MS.gene063909:CDS 40.0%
GCAAATATGGCTGTTGGATT+GGG + chr8.1:61488322-61488341 MS.gene063909:CDS 40.0%
GCAATTCCTGCAACTATTCT+GGG + chr8.1:61491514-61491533 MS.gene063909:CDS 40.0%
GCAGACTGCACATTAATGTT+GGG - chr8.1:61490576-61490595 None:intergenic 40.0%
GCATTATGAAACATGGGAGA+CGG + chr8.1:61490995-61491014 MS.gene063909:CDS 40.0%
GGTACTTTCCTACCATTTCA+AGG - chr8.1:61491679-61491698 None:intergenic 40.0%
GTAGTGTTTGAAGAACTTGG+CGG + chr8.1:61492189-61492208 MS.gene063909:CDS 40.0%
GTGAATTACTACATGGTTGG+TGG + chr8.1:61488844-61488863 MS.gene063909:intron 40.0%
GTGAATTTGGTATCACCCAA+TGG + chr8.1:61491215-61491234 MS.gene063909:CDS 40.0%
GTTCCTAATGGTGTAACAGT+AGG - chr8.1:61489458-61489477 None:intergenic 40.0%
GTTGCTCGTTTCATTCAGAA+GGG + chr8.1:61488811-61488830 MS.gene063909:CDS 40.0%
TAGTGTTTGAAGAACTTGGC+GGG + chr8.1:61492190-61492209 MS.gene063909:CDS 40.0%
TATCTCCTAGATCTTCAGTC+AGG + chr8.1:61490250-61490269 MS.gene063909:intron 40.0%
TATGTACCATAGATAGTCGC+TGG - chr8.1:61490203-61490222 None:intergenic 40.0%
TCAGAATCATTTCTTCGAGG+AGG + chr8.1:61490543-61490562 MS.gene063909:CDS 40.0%
TCCTTGCAAGTATCAACAGA+GGG + chr8.1:61491861-61491880 MS.gene063909:intron 40.0%
TCTCCCATGTTTCATAATGC+CGG - chr8.1:61490995-61491014 None:intergenic 40.0%
TGCAAATATGGCTGTTGGAT+TGG + chr8.1:61488321-61488340 MS.gene063909:CDS 40.0%
TGCAATTCCTGCAACTATTC+TGG + chr8.1:61491513-61491532 MS.gene063909:CDS 40.0%
TGCAGACTGCACATTAATGT+TGG - chr8.1:61490577-61490596 None:intergenic 40.0%
TGGTCATGCATACCTAAACT+GGG + chr8.1:61488297-61488316 MS.gene063909:CDS 40.0%
TGGTCCAATAATTCTCTCTC+AGG + chr8.1:61487928-61487947 MS.gene063909:CDS 40.0%
TGGTGTCTCTTGTAACATTG+AGG - chr8.1:61490183-61490202 None:intergenic 40.0%
TTCCACTCAGCGCATATATA+AGG - chr8.1:61487578-61487597 None:intergenic 40.0%
TTTATTGGAAGAACGTTGGC+CGG + chr8.1:61490973-61490992 MS.gene063909:intron 40.0%
! AAGTTGGTCCTTGAAATGGT+AGG + chr8.1:61491668-61491687 MS.gene063909:intron 40.0%
! AGCTCTCTTTTTGTTCAGGA+TGG - chr8.1:61489320-61489339 None:intergenic 40.0%
! ATCTGTAGTGGAGAATTGGA+TGG - chr8.1:61488549-61488568 None:intergenic 40.0%
! CACTATGTTTAGGTTTGGTC+AGG + chr8.1:61489357-61489376 MS.gene063909:intron 40.0%
! GAAAAGCTGTTTCAGTCTCA+GGG + chr8.1:61487905-61487924 MS.gene063909:CDS 40.0%
! GAGGTTTGAAGTTTGTGGTA+AGG - chr8.1:61491364-61491383 None:intergenic 40.0%
! GTTGAACAGGTTGGACTAAA+AGG + chr8.1:61491185-61491204 MS.gene063909:intron 40.0%
! TGAAAAGCTGTTTCAGTCTC+AGG + chr8.1:61487904-61487923 MS.gene063909:CDS 40.0%
! TGAGCATGCTTTGGTTTCTT+CGG + chr8.1:61489430-61489449 MS.gene063909:CDS 40.0%
!! AAATGAGTCCTGTCGATTCT+AGG + chr8.1:61490077-61490096 MS.gene063909:CDS 40.0%
!! AAGCATCGGAAGATATTGGA+TGG + chr8.1:61491473-61491492 MS.gene063909:CDS 40.0%
!! ACTCAAGTTGGTCCTTGAAA+TGG + chr8.1:61491664-61491683 MS.gene063909:intron 40.0%
!! ATCCGTTCTGAAGCTTATTC+CGG - chr8.1:61487725-61487744 None:intergenic 40.0%
!! CCTCAAGTTGAGTTGATTCT+TGG + chr8.1:61489243-61489262 MS.gene063909:intron 40.0%
!! CTTTCTTTAAGACCACTCAG+GGG - chr8.1:61489279-61489298 None:intergenic 40.0%
!! CTTTTAAAGGGTCGGCATTT+GGG + chr8.1:61490716-61490735 MS.gene063909:intron 40.0%
!! GACAAAGCATCGGAAGATAT+TGG + chr8.1:61491469-61491488 MS.gene063909:CDS 40.0%
!! TATGTGCTTGGTGATTTTCC+AGG + chr8.1:61489586-61489605 MS.gene063909:intron 40.0%
!! TCTTTTAAAGGGTCGGCATT+TGG + chr8.1:61490715-61490734 MS.gene063909:intron 40.0%
!! TGTCGATTCTAGGTTCTCAT+GGG + chr8.1:61490087-61490106 MS.gene063909:CDS 40.0%
!!! GCTTATTTTAACACGCCTGA+GGG + chr8.1:61491387-61491406 MS.gene063909:CDS 40.0%
AACGAATATGGACCAGAGAG+CGG + chr8.1:61488259-61488278 MS.gene063909:CDS 45.0%
ACCACAAACTTCAAACCTCC+AGG + chr8.1:61491365-61491384 MS.gene063909:intron 45.0%
ACCATTAGGAACACTTCAGC+AGG + chr8.1:61489466-61489485 MS.gene063909:CDS 45.0%
AGAATGAAAGAGCTCACCAC+AGG - chr8.1:61488394-61488413 None:intergenic 45.0%
AGTTCAAGGATTACAGCTGC+TGG + chr8.1:61490145-61490164 MS.gene063909:CDS 45.0%
ATAAGGTCCAATGCGGAGAT+TGG - chr8.1:61487561-61487580 None:intergenic 45.0%
ATATGCGCTGAGTGGAACTT+TGG + chr8.1:61487581-61487600 MS.gene063909:CDS 45.0%
ATCATTAGCTGAGACCCCAT+TGG - chr8.1:61491234-61491253 None:intergenic 45.0%
ATGGGGTCTCAGCTAATGAT+TGG + chr8.1:61491234-61491253 MS.gene063909:CDS 45.0%
ATTCACTAGCTACTCCAAGC+CGG + chr8.1:61491264-61491283 MS.gene063909:CDS 45.0%
ATTGCCCGTTAGCAAACACA+TGG - chr8.1:61490611-61490630 None:intergenic 45.0%
CAAGCCGGTCACAACTAAAA+TGG + chr8.1:61491279-61491298 MS.gene063909:CDS 45.0%
CAGGCGTGTTAAAATAAGCC+TGG - chr8.1:61491386-61491405 None:intergenic 45.0%
CATGAGAACCTAGAATCGAC+AGG - chr8.1:61490088-61490107 None:intergenic 45.0%
CCATATTTGCAGCCCAGTTT+AGG - chr8.1:61488312-61488331 None:intergenic 45.0%
CCTAAACTGGGCTGCAAATA+TGG + chr8.1:61488309-61488328 MS.gene063909:CDS 45.0%
CGGAAGTTATGCAATCAGGA+AGG - chr8.1:61489736-61489755 None:intergenic 45.0%
CTGGTCATGCATACCTAAAC+TGG + chr8.1:61488296-61488315 MS.gene063909:CDS 45.0%
CTTCAGCTGTCACACTTAAG+GGG + chr8.1:61488431-61488450 MS.gene063909:intron 45.0%
CTTTATGCCAATCTCCGCAT+TGG + chr8.1:61487551-61487570 MS.gene063909:CDS 45.0%
GAATGTCCCAGAATAGTTGC+AGG - chr8.1:61491523-61491542 None:intergenic 45.0%
GACCTTATATATGCGCTGAG+TGG + chr8.1:61487573-61487592 MS.gene063909:CDS 45.0%
GACTGTAGCAAAGGTAAGAG+AGG - chr8.1:61488144-61488163 None:intergenic 45.0%
GATGTTCATGAACCATCTCC+TGG + chr8.1:61487367-61487386 MS.gene063909:CDS 45.0%
GCAAATGCTAGATCCTGAAC+TGG - chr8.1:61488790-61488809 None:intergenic 45.0%
GCAATCAGGAAGGATGCTTA+TGG - chr8.1:61489726-61489745 None:intergenic 45.0%
GCGTGTTAAAATAAGCCTGG+AGG - chr8.1:61491383-61491402 None:intergenic 45.0%
GCTCCAGCATGTAGATTAAC+TGG - chr8.1:61490775-61490794 None:intergenic 45.0%
GCTTCAGCTGTCACACTTAA+GGG + chr8.1:61488430-61488449 MS.gene063909:intron 45.0%
GGCACATACTTCAACCAAAC+AGG - chr8.1:61487703-61487722 None:intergenic 45.0%
GGTATCATGTTCCAAGGTCA+TGG + chr8.1:61492142-61492161 MS.gene063909:intron 45.0%
GGTATTACATTGCCAGGAGA+TGG - chr8.1:61487382-61487401 None:intergenic 45.0%
GGTGAGCTCTTTCATTCTCT+TGG + chr8.1:61488396-61488415 MS.gene063909:intron 45.0%
GGTGCTTCTTGGATAGTGAA+TGG - chr8.1:61487184-61487203 None:intergenic 45.0%
GGTGTAGAGGAATTCCTGTT+TGG + chr8.1:61487686-61487705 MS.gene063909:intron 45.0%
GTATTCTCTGCAGGAACTAC+AGG + chr8.1:61489614-61489633 MS.gene063909:CDS 45.0%
GTCCACATGCTAGGCTTATA+TGG - chr8.1:61488618-61488637 None:intergenic 45.0%
GTCCTTGCAAGTATCAACAG+AGG + chr8.1:61491860-61491879 MS.gene063909:intron 45.0%
GTTTGGTTGAAGTATGTGCC+CGG + chr8.1:61487703-61487722 MS.gene063909:CDS 45.0%
TACCATGGAGGAACCAACTT+TGG + chr8.1:61489011-61489030 MS.gene063909:CDS 45.0%
TATGCGCTGAGTGGAACTTT+GGG + chr8.1:61487582-61487601 MS.gene063909:CDS 45.0%
TCATTAGCTGAGACCCCATT+GGG - chr8.1:61491233-61491252 None:intergenic 45.0%
TCCCTCTGTTGATACTTGCA+AGG - chr8.1:61491865-61491884 None:intergenic 45.0%
TGATACAATAGACACCGCCT+AGG - chr8.1:61490335-61490354 None:intergenic 45.0%
TGCTTCAGCTGTCACACTTA+AGG + chr8.1:61488429-61488448 MS.gene063909:intron 45.0%
TGGCCGGCATTATGAAACAT+GGG + chr8.1:61490989-61491008 MS.gene063909:CDS 45.0%
TGGGGTCTCAGCTAATGATT+GGG + chr8.1:61491235-61491254 MS.gene063909:CDS 45.0%
TTCAGCTGTCACACTTAAGG+GGG + chr8.1:61488432-61488451 MS.gene063909:intron 45.0%
TTGGCCGGCATTATGAAACA+TGG + chr8.1:61490988-61491007 MS.gene063909:CDS 45.0%
TTTCCTTGCACATCACCCAA+GGG - chr8.1:61488357-61488376 None:intergenic 45.0%
! ACAGGTTGGACTAAAAGGAG+AGG + chr8.1:61491190-61491209 MS.gene063909:intron 45.0%
! ACCTGCTGAAGTGTTCCTAA+TGG - chr8.1:61489470-61489489 None:intergenic 45.0%
! CAAGGTGTCTGACAAGCAAA+TGG - chr8.1:61490908-61490927 None:intergenic 45.0%
! GACCTAGGAAGTATGGGTAA+GGG + chr8.1:61491429-61491448 MS.gene063909:CDS 45.0%
! GCTTTGGACCTAGGAAGTAT+GGG + chr8.1:61491423-61491442 MS.gene063909:CDS 45.0%
! TCTAAAGTCTGCTGCTACTG+TGG + chr8.1:61489664-61489683 MS.gene063909:CDS 45.0%
! TCTGTTTGGAATGATGTCGC+AGG + chr8.1:61492121-61492140 MS.gene063909:intron 45.0%
! TTTTCCTTGCACATCACCCA+AGG - chr8.1:61488358-61488377 None:intergenic 45.0%
!! AACGGATAACGGACCTTTCA+AGG + chr8.1:61487738-61487757 MS.gene063909:CDS 45.0%
!! CTGTCGATTCTAGGTTCTCA+TGG + chr8.1:61490086-61490105 MS.gene063909:CDS 45.0%
!! TCCGTTCTGAAGCTTATTCC+GGG - chr8.1:61487724-61487743 None:intergenic 45.0%
!!! CATTTTAGTTGTGACCGGCT+TGG - chr8.1:61491281-61491300 None:intergenic 45.0%
!!! GGCTTATTTTAACACGCCTG+AGG + chr8.1:61491386-61491405 MS.gene063909:intron 45.0%
!!! AAAAATACAATTTTTTTAAA+AGG - chr8.1:61487422-61487441 None:intergenic 5.0%
!!! AAAATACAATTTTTTTAAAA+GGG - chr8.1:61487421-61487440 None:intergenic 5.0%
!!! GATATATATATTTTTTTTTT+GGG + chr8.1:61487829-61487848 MS.gene063909:intron 5.0%
!!! TGATATATATATTTTTTTTT+TGG + chr8.1:61487828-61487847 MS.gene063909:intron 5.0%
AAAGAGCTCACCACAGGATC+CGG - chr8.1:61488388-61488407 None:intergenic 50.0%
AACTTTGGACGATCAGCTGG+TGG + chr8.1:61489026-61489045 MS.gene063909:CDS 50.0%
AAGAACTTGGCGGGAATCCT+TGG + chr8.1:61492199-61492218 MS.gene063909:CDS 50.0%
AATTCACCAGCGACCAGTTC+AGG + chr8.1:61488774-61488793 MS.gene063909:CDS 50.0%
ACCAACTTTGGACGATCAGC+TGG + chr8.1:61489023-61489042 MS.gene063909:CDS 50.0%
ACCAGCTGATCGTCCAAAGT+TGG - chr8.1:61489027-61489046 None:intergenic 50.0%
ACGAATATGGACCAGAGAGC+GGG + chr8.1:61488260-61488279 MS.gene063909:CDS 50.0%
AGGATGCTTATGGACCATGG+AGG - chr8.1:61489716-61489735 None:intergenic 50.0%
ATTGGGAACAGGAGTCCCTT+GGG + chr8.1:61488339-61488358 MS.gene063909:CDS 50.0%
CAAGCGATGTGAGCATGCTT+TGG + chr8.1:61489421-61489440 MS.gene063909:CDS 50.0%
CAGGCTCATGTATTCTCTGC+AGG + chr8.1:61489605-61489624 MS.gene063909:intron 50.0%
CCCGTTAGCAAACACATGGA+CGG - chr8.1:61490607-61490626 None:intergenic 50.0%
CTGCAGAGAATACATGAGCC+TGG - chr8.1:61489607-61489626 None:intergenic 50.0%
CTTCCTAGGTCCAAAGCCAA+TGG - chr8.1:61491420-61491439 None:intergenic 50.0%
GAACTGGTCGCTGGTGAATT+GGG - chr8.1:61488774-61488793 None:intergenic 50.0%
GAGACACCAGCGACTATCTA+TGG + chr8.1:61490194-61490213 MS.gene063909:CDS 50.0%
GATGGCCTGACTGAAGATCT+AGG - chr8.1:61490258-61490277 None:intergenic 50.0%
GCCCGGAATAAGCTTCAGAA+CGG + chr8.1:61487720-61487739 MS.gene063909:CDS 50.0%
GCTCGTTTCATTCAGAAGGG+TGG + chr8.1:61488814-61488833 MS.gene063909:CDS 50.0%
GGAAGGATGCTTATGGACCA+TGG - chr8.1:61489719-61489738 None:intergenic 50.0%
GGATCATTTCAACCCCTGAG+TGG + chr8.1:61489264-61489283 MS.gene063909:intron 50.0%
GGGCCAGTTAATCTACATGC+TGG + chr8.1:61490769-61490788 MS.gene063909:CDS 50.0%
GTATGGGTAAGGGCCAAGTA+TGG + chr8.1:61491439-61491458 MS.gene063909:CDS 50.0%
GTCGCAGGTATCATGTTCCA+AGG + chr8.1:61492136-61492155 MS.gene063909:intron 50.0%
GTGCAAGGAAAATGATGCCC+CGG + chr8.1:61488366-61488385 MS.gene063909:CDS 50.0%
GTGGACAACCCACTCAAAGA+TGG + chr8.1:61491568-61491587 MS.gene063909:CDS 50.0%
GTGTGACAGCTGAAGCAAAC+TGG - chr8.1:61488426-61488445 None:intergenic 50.0%
TCAAGACCATGGAGCACAAC+TGG - chr8.1:61491032-61491051 None:intergenic 50.0%
TGAACTGGTCGCTGGTGAAT+TGG - chr8.1:61488775-61488794 None:intergenic 50.0%
TGGGCTGCAAATATGGCTGT+TGG + chr8.1:61488316-61488335 MS.gene063909:CDS 50.0%
TGGGTTGTCCACAACCAAGT+TGG - chr8.1:61491560-61491579 None:intergenic 50.0%
TGGGTTTAGGCTGCAATGCA+AGG + chr8.1:61487848-61487867 MS.gene063909:intron 50.0%
! AAGCTGTTTCAGTCTCAGGG+TGG + chr8.1:61487908-61487927 MS.gene063909:CDS 50.0%
! AGACCTGCAAAGTGCCAACT+TGG + chr8.1:61491543-61491562 MS.gene063909:CDS 50.0%
! ATGGCTGTTGGATTGGGAAC+AGG + chr8.1:61488328-61488347 MS.gene063909:CDS 50.0%
! CAACCAAGTTGGCACTTTGC+AGG - chr8.1:61491549-61491568 None:intergenic 50.0%
! CCGTCCATGTGTTTGCTAAC+GGG + chr8.1:61490604-61490623 MS.gene063909:CDS 50.0%
! GCAAAGTGCCAACTTGGTTG+TGG + chr8.1:61491549-61491568 MS.gene063909:CDS 50.0%
! GCCGTCCATGTGTTTGCTAA+CGG + chr8.1:61490603-61490622 MS.gene063909:CDS 50.0%
! GCCTGGAGGTTTGAAGTTTG+TGG - chr8.1:61491369-61491388 None:intergenic 50.0%
! GGACCTAGGAAGTATGGGTA+AGG + chr8.1:61491428-61491447 MS.gene063909:CDS 50.0%
! GTCCAAAGTTGGTTCCTCCA+TGG - chr8.1:61489016-61489035 None:intergenic 50.0%
!! CATACTTCAGGGGTGCTTCT+TGG - chr8.1:61487195-61487214 None:intergenic 50.0%
!! GAACCATTGGCTTTGGACCT+AGG + chr8.1:61491414-61491433 MS.gene063909:CDS 50.0%
!! GGCTTTGGACCTAGGAAGTA+TGG + chr8.1:61491422-61491441 MS.gene063909:CDS 50.0%
!! GTTGGCTTTAGCCATGACCT+TGG - chr8.1:61492156-61492175 None:intergenic 50.0%
AAATGATGCCCCGGATCCTG+TGG + chr8.1:61488375-61488394 MS.gene063909:CDS 55.0%
AAGAGCTCACCACAGGATCC+GGG - chr8.1:61488387-61488406 None:intergenic 55.0%
ACTGGTCCAGTTGTGCTCCA+TGG + chr8.1:61491023-61491042 MS.gene063909:CDS 55.0%
AGTCCCTTGGGTGATGTGCA+AGG + chr8.1:61488351-61488370 MS.gene063909:CDS 55.0%
ATGTGGACGGAGTCTTGGAG+TGG + chr8.1:61488630-61488649 MS.gene063909:CDS 55.0%
CAAGACTCCGTCCACATGCT+AGG - chr8.1:61488627-61488646 None:intergenic 55.0%
CGAATATGGACCAGAGAGCG+GGG + chr8.1:61488261-61488280 MS.gene063909:CDS 55.0%
CTAGATCCTGAACTGGTCGC+TGG - chr8.1:61488783-61488802 None:intergenic 55.0%
CTAGCATGTGGACGGAGTCT+TGG + chr8.1:61488625-61488644 MS.gene063909:CDS 55.0%
GATTGGGAACAGGAGTCCCT+TGG + chr8.1:61488338-61488357 MS.gene063909:CDS 55.0%
GCTCTTCTCAGCGTGACTGT+CGG + chr8.1:61490805-61490824 MS.gene063909:CDS 55.0%
GGCCCTTACCCATACTTCCT+AGG - chr8.1:61491434-61491453 None:intergenic 55.0%
GGTGGGAACTCAAACGTCAG+TGG + chr8.1:61490051-61490070 MS.gene063909:intron 55.0%
TCGGTCCATGGTCAAGACCA+TGG - chr8.1:61491043-61491062 None:intergenic 55.0%
! GGCACTATGACTTGCCTCCA+TGG + chr8.1:61489699-61489718 MS.gene063909:CDS 55.0%
! GTGCTCCATGGTCTTGACCA+TGG + chr8.1:61491035-61491054 MS.gene063909:CDS 55.0%
! TGGTCTTGACCATGGACCGA+AGG + chr8.1:61491043-61491062 MS.gene063909:CDS 55.0%
!! GGGCAACGAACCATTGGCTT+TGG + chr8.1:61491407-61491426 MS.gene063909:CDS 55.0%
ACATGGGAGACGGGGATCAC+TGG + chr8.1:61491005-61491024 MS.gene063909:CDS 60.0%
AGAGCTCACCACAGGATCCG+GGG - chr8.1:61488386-61488405 None:intergenic 60.0%
CAGCGTGACTGTCGGATTGC+CGG + chr8.1:61490813-61490832 MS.gene063909:CDS 60.0%
GCCAATGGTTCGTTGCCCTC+AGG - chr8.1:61491405-61491424 None:intergenic 60.0%
GCCTGAGGGCAACGAACCAT+TGG + chr8.1:61491401-61491420 MS.gene063909:CDS 60.0%
GCGACAGATCCTTCGGTCCA+TGG - chr8.1:61491055-61491074 None:intergenic 60.0%
! AAGGGTCGGCATTTGGGACG+AGG + chr8.1:61490722-61490741 MS.gene063909:intron 60.0%
GGACCAGAGAGCGGGGCAAT+GGG + chr8.1:61488268-61488287 MS.gene063909:CDS 65.0%
GGACGGAGTCTTGGAGTGGC+TGG + chr8.1:61488634-61488653 MS.gene063909:CDS 65.0%
TGGACCAGAGAGCGGGGCAA+TGG + chr8.1:61488267-61488286 MS.gene063909:CDS 65.0%
AGCGGGGCAATGGGAGCTGC+TGG + chr8.1:61488277-61488296 MS.gene063909:CDS 70.0%
GCTCCCATTGCCCCGCTCTC+TGG - chr8.1:61488274-61488293 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 61487039 61492269 61487039 ID=MS.gene063909
chr8.1 mRNA 61487039 61492269 61487039 ID=MS.gene063909.t1;Parent=MS.gene063909
chr8.1 exon 61487039 61487209 61487039 ID=MS.gene063909.t1.exon1;Parent=MS.gene063909.t1
chr8.1 CDS 61487039 61487209 61487039 ID=cds.MS.gene063909.t1;Parent=MS.gene063909.t1
chr8.1 exon 61487298 61487393 61487298 ID=MS.gene063909.t1.exon2;Parent=MS.gene063909.t1
chr8.1 CDS 61487298 61487393 61487298 ID=cds.MS.gene063909.t1;Parent=MS.gene063909.t1
chr8.1 exon 61487491 61487603 61487491 ID=MS.gene063909.t1.exon3;Parent=MS.gene063909.t1
chr8.1 CDS 61487491 61487603 61487491 ID=cds.MS.gene063909.t1;Parent=MS.gene063909.t1
chr8.1 exon 61487693 61487759 61487693 ID=MS.gene063909.t1.exon4;Parent=MS.gene063909.t1
chr8.1 CDS 61487693 61487759 61487693 ID=cds.MS.gene063909.t1;Parent=MS.gene063909.t1
chr8.1 exon 61487857 61487949 61487857 ID=MS.gene063909.t1.exon5;Parent=MS.gene063909.t1
chr8.1 CDS 61487857 61487949 61487857 ID=cds.MS.gene063909.t1;Parent=MS.gene063909.t1
chr8.1 exon 61488253 61488396 61488253 ID=MS.gene063909.t1.exon6;Parent=MS.gene063909.t1
chr8.1 CDS 61488253 61488396 61488253 ID=cds.MS.gene063909.t1;Parent=MS.gene063909.t1
chr8.1 exon 61488567 61488655 61488567 ID=MS.gene063909.t1.exon7;Parent=MS.gene063909.t1
chr8.1 CDS 61488567 61488655 61488567 ID=cds.MS.gene063909.t1;Parent=MS.gene063909.t1
chr8.1 exon 61488753 61488858 61488753 ID=MS.gene063909.t1.exon8;Parent=MS.gene063909.t1
chr8.1 CDS 61488753 61488858 61488753 ID=cds.MS.gene063909.t1;Parent=MS.gene063909.t1
chr8.1 exon 61489011 61489098 61489011 ID=MS.gene063909.t1.exon9;Parent=MS.gene063909.t1
chr8.1 CDS 61489011 61489098 61489011 ID=cds.MS.gene063909.t1;Parent=MS.gene063909.t1
chr8.1 exon 61489369 61489487 61489369 ID=MS.gene063909.t1.exon10;Parent=MS.gene063909.t1
chr8.1 CDS 61489369 61489487 61489369 ID=cds.MS.gene063909.t1;Parent=MS.gene063909.t1
chr8.1 exon 61489608 61489772 61489608 ID=MS.gene063909.t1.exon11;Parent=MS.gene063909.t1
chr8.1 CDS 61489608 61489772 61489608 ID=cds.MS.gene063909.t1;Parent=MS.gene063909.t1
chr8.1 exon 61490052 61490227 61490052 ID=MS.gene063909.t1.exon12;Parent=MS.gene063909.t1
chr8.1 CDS 61490052 61490227 61490052 ID=cds.MS.gene063909.t1;Parent=MS.gene063909.t1
chr8.1 exon 61490527 61490636 61490527 ID=MS.gene063909.t1.exon13;Parent=MS.gene063909.t1
chr8.1 CDS 61490527 61490636 61490527 ID=cds.MS.gene063909.t1;Parent=MS.gene063909.t1
chr8.1 exon 61490725 61490834 61490725 ID=MS.gene063909.t1.exon14;Parent=MS.gene063909.t1
chr8.1 CDS 61490725 61490834 61490725 ID=cds.MS.gene063909.t1;Parent=MS.gene063909.t1
chr8.1 exon 61490984 61491094 61490984 ID=MS.gene063909.t1.exon15;Parent=MS.gene063909.t1
chr8.1 CDS 61490984 61491094 61490984 ID=cds.MS.gene063909.t1;Parent=MS.gene063909.t1
chr8.1 exon 61491194 61491307 61491194 ID=MS.gene063909.t1.exon16;Parent=MS.gene063909.t1
chr8.1 CDS 61491194 61491307 61491194 ID=cds.MS.gene063909.t1;Parent=MS.gene063909.t1
chr8.1 exon 61491387 61491589 61491387 ID=MS.gene063909.t1.exon17;Parent=MS.gene063909.t1
chr8.1 CDS 61491387 61491589 61491387 ID=cds.MS.gene063909.t1;Parent=MS.gene063909.t1
chr8.1 exon 61492143 61492269 61492143 ID=MS.gene063909.t1.exon18;Parent=MS.gene063909.t1
chr8.1 CDS 61492143 61492269 61492143 ID=cds.MS.gene063909.t1;Parent=MS.gene063909.t1
Gene Sequence

>MS.gene063909

ATGGACATTGCTTCAGTTTCAAAGCTATCCCTAGTAGTAGTAACAACATTGTTTGTTTTGTTTTTGGATTGTCATAGCAAAGTTACATATGACAGAAAGTCTCTTCTCATCAATGGCCAAAGAAGAATTCTAATTTCTGGTTCCATTCACTATCCAAGAAGCACCCCTGAAGTATGTTTGCAATTGCATTTCAATTTTCAAGTTTCTATAGTAATTCAAGTTCTTGTTTTGTAATTTGTTTCAAATGTGTGATTTTTAGATGTGGGAAGATCTAATTAAGAAAGCCAAACATGGTGGTCTTGATGTTATAGACACTTATGTCTTCTGGGATGTTCATGAACCATCTCCTGGCAATGTAATACCCTTAATTTTCATGAAGCCCTTTTAAAAAAATTGTATTTTTTTTTTATGTTATTTGTTGTTTTTCTGATTATGTATGGGTTGCATTGCAGTACAATTTTGAAGGAAGATATGATTTAGTAAGGTTTATTAAGACAATGCAAAAAGTGGGGCTTTATGCCAATCTCCGCATTGGACCTTATATATGCGCTGAGTGGAACTTTGGGTACAATGCATGCTGCTGCTTCCATTTTAATTTCATTCCTTTTTATGTAATTTTGTTGTGATTTACAATTTTATTCTTTAATGGTGTAGAGGAATTCCTGTTTGGTTGAAGTATGTGCCCGGAATAAGCTTCAGAACGGATAACGGACCTTTCAAGGTTGAATTTTTCTTTGATTTTATGATAATTTGGTTTCTCGGTTTTGACGGAGTCTTGAATAATCTGATTGATATATATATTTTTTTTTTGGGTTTAGGCTGCAATGCAAGGTTTTACTCAGAAGATTGTCCAAATGATGAAGAGTGAAAAGCTGTTTCAGTCTCAGGGTGGTCCAATAATTCTCTCTCAGGTATGCCTTTCTCTTTTGAATGTGTGCGTAATTGAAGGAAATGCTCAAAAACCTAGAAGTAGATGAAACATAAGTGTAATTCATATTTCATACCATCAAATTACTACTTCAAGATGTAGTCCTATTGTTTTGTAGATCAGATAAGTTATTTGAACAACAAAATACACATATCGTGTGTGTTTATCTCTATCCCTCTCTTACCTTTGCTACAGTCTACGTACATTTAAAAAATATACACAAAAATCAAATGACACTGCATTCGACATCAAAATTTTGATACGAAAAAATTATTTCTCTTTCTAGATTGAGAACGAATATGGACCAGAGAGCGGGGCAATGGGAGCTGCTGGTCATGCATACCTAAACTGGGCTGCAAATATGGCTGTTGGATTGGGAACAGGAGTCCCTTGGGTGATGTGCAAGGAAAATGATGCCCCGGATCCTGTGGTGAGCTCTTTCATTCTCTTGGTTAACCAGTTTGCTTCAGCTGTCACACTTAAGGGGGATTGATTGAGTTCAAGAATTGAAATTATCGAGTCTCAAGTTCTATATTTAGGCTCACCATCATTATATACTTATTGAGTGTTGAATATGATCCATCCAATTCTCCACTACAGATTAATTCATGTAATGGTTTTTACTGTGACGATTTCTCTCCGAATAAACCATATAAGCCTAGCATGTGGACGGAGTCTTGGAGTGGCTGGTAAGCTATATATAGTTCTGATGTTAGATATAGTTGTCTAATTTCTTCACCCTTTTATACTTCTGATCTCTCTCTTTCTATTCTCCATGATCATAAGGTTTACAGATTTTGGTGGCCCAATTCACCAGCGACCAGTTCAGGATCTAGCATTTGCAGTTGCTCGTTTCATTCAGAAGGGTGGCTCATATGTGAATTACTACATGGTTGGTGGTCGCCTTCTATGAATTTATTTTTCAGATTTTCAAAAATGACTTTAACTATTTGAATAAGGTTCAGTTATTTTTGTTGCAAGAAAACATGTGGTGCTTTGCATTGAACCTTAAGTTTCACCTTTGTCCGTTATGATAAATTATAGTACCATGGAGGAACCAACTTTGGACGATCAGCTGGTGGTCCATTCATTACTACAAGCTATGACTATGATGCTCCAATTGATGAATATGGTAAGAAAATCATACTTGCCAGAAGCAGATTCTTCGATATTTTTGTTTGCTAGTGATTCACTGAGAATTTGAATGGATAGTACAGATATAGTTCACGACGCTTATGAAATAATGTATCATAAATATACATGCATTTGATTTGACCCTCAAGTTGAGTTGATTCTTGGATCATTTCAACCCCTGAGTGGTCTTAAAGAAAGTTTATTGATGTTTTTGTTCCATCCTGAACAAAAAGAGAGCTTTTACAATTGAGCACTTCACTATGTTTAGGTTTGGTCAGGCAGCCAAAATATAGTCATTTGAAGGAGCTTCATAAAGCTATCAAGCGATGTGAGCATGCTTTGGTTTCTTCGGATCCTACTGTTACACCATTAGGAACACTTCAGCAGGTAAATTGTCATTGATATTGAAGCAACTAACCCTTTTCTAGTTCTTTGCTTGTTTATGTTAAAGCATTATTGCGGTGACAATTACCTTATTCTCTCTGTATGTGCTTGGTGATTTTCCAGGCTCATGTATTCTCTGCAGGAACTACAGGATGTGCAGCTTTTCTAGCAAACTATCATCTAAAGTCTGCTGCTACTGTGGTTTTCAATAATAGGCACTATGACTTGCCTCCATGGTCCATAAGCATCCTTCCTGATTGCATAACTTCCGTATTTAATACTGCAAATGTAAGAATATTTTGCAGGACCTTTTAAGCTATGTTGATTAAAATTTATCATAATATATCAGATTCAAAGCGAGATTCATGTCCAAAATAGATACAAACTAGAAATACTTACTGATTGAGTACAATATAGTTCGAATGTAGATATGAATCGCATGTATTGTAAGTCACTGATAACCATTTAAATGTGATGTAATAGTCATCCATCATAATTTATTCCTATATTAAGCCTTGTCCTTTGCATCAATCAATTATTTGACTGGACTGATATATATTTATACAGGTGGGAACTCAAACGTCAGTGGTAAAAATGAGTCCTGTCGATTCTAGGTTCTCATGGGAGACCTATGATGAAGATCTATCTTCTCTAGACGAAAGTTCAAGGATTACAGCTGCTGGACTCTTAGAACACCTCAATGTTACAAGAGACACCAGCGACTATCTATGGTACATAACCAGGTAAGATGAGTGATATAATTGTTATCTCCTAGATCTTCAGTCAGGCCATCAAATGAATTACGAAAACTTTTTGAGCTGTTGGTTTCATATCAAAGCAATAATTTCCTAGGCGGTGTCTATTGTATCAAAATGCCAATTCAAGCAGAAGAAATTTGCTTGTTTTTGTTTCCAATAAATTCCTGTACTTGACCATTTTAAGCATCTTTCAGATTATAATCTTTTACACATAAAATATGCTATCCTACCTTCTCAGTTCTCAACATTTCAAATGTTACTGTTTTTTGGTTGGCACGCTGCAGTGTTGACATAAGTTCATCAGAATCATTTCTTCGAGGAGGACACAAACCCAACATTAATGTGCAGTCTGCAGGACATGCCGTCCATGTGTTTGCTAACGGGCAATTTTTAGGTATGCAGAGACACGCAATTAAACATTGTAGTCGATATATTTGCTTATTAATTCTGAGTTAACTGAAGGTGACTGATTTCTTTTAAAGGGTCGGCATTTGGGACGAGGAAACAGAGAAGTTGCACATTTAATGGGCCAGTTAATCTACATGCTGGAGCAAATAAAATTGCTCTTCTCAGCGTGACTGTCGGATTGCCGGTTAGTGCTTAATACCATATTCTAAATCCAACTTGAACTTGAGCATTCAGTTGCACTGCTTCAAGTGTTTCCATTTGCTTGTCAGACACCTTGCTTGTCACTGATTGAATTTTTATTTTATTTTTACTCTTGCCATTTTTTATTGGAAGAACGTTGGCCGGCATTATGAAACATGGGAGACGGGGATCACTGGTCCAGTTGTGCTCCATGGTCTTGACCATGGACCGAAGGATCTGTCGCATAATAAATGGTCTTATCAGGTCTGATATACAAAAAATACACGTAATATAATTTATGATTCTTAAACTTCAATCAATGTAAAGAGAAATTGTTATCAAGTAGAATATGTTGTTGAACAGGTTGGACTAAAAGGAGAGGCTGTGAATTTGGTATCACCCAATGGGGTCTCAGCTAATGATTGGGTTCAAGATTCACTAGCTACTCCAAGCCGGTCACAACTAAAATGGTACAAGGTAAGAGCAGTTTACTAGGTTATTGTATAATCTGTTGAGATCTTCAACTAGAACCTTACCACAAACTTCAAACCTCCAGGCTTATTTTAACACGCCTGAGGGCAACGAACCATTGGCTTTGGACCTAGGAAGTATGGGTAAGGGCCAAGTATGGATAAATGGACAAAGCATCGGAAGATATTGGATGGCTTATGCAAAGGGTGACTGCAATTCCTGCAACTATTCTGGGACATTCAGACCTGCAAAGTGCCAACTTGGTTGTGGACAACCCACTCAAAGATGGTACAATTTTTCTCTAATACAAGACATAACTTCAACCTTACTTCTTTGTTTGTTTAGGAAAATGTGGAGTAAATACTCAAGTTGGTCCTTGAAATGGTAGGAAAGTACCAATCTAGTCCCTCATATTATCAATATTTCAAAATGGTCTCTTATATTGAAAACTATTACTTAAGTTCGTCCCTCTGTTTTGACCTGTTATCAAATGCATCTCTGATATTATTTACTCAATGTCAAATTCATTCCCCATGTTATCAAATTAATATCATTTTAGTCCTTGCAAGTATCAACAGAGGGACAAACCTGATTAACCTTTTCAACTTTAGGAATCATTTTGGAATATTGATGATGTGGATACTAGGTTAATACAATCTTATAATTTCAATGACCAAATTGGATATTTGCGACATACTATTAAGTAATGATAATGACACGTTATTTTGGGTACAATGTGCCAGATCCAATGCCACTAATATTATTATTCTTCTGTATACAAGAGGCTAGTGATGAAAGAACAGACATGTTTACAAGTGTTCTGTTTGGAATGATGTCGCAGGTATCATGTTCCAAGGTCATGGCTAAAGCCAACAAAGAACCTAATAGTAGTGTTTGAAGAACTTGGCGGGAATCCTTGGAAAATTTCTTTGGTGAAGAGAACAGTACATACTGCCGCAGCTCGTTAG
Protein sequence

>MS.gene063909.t1

MDIASVSKLSLVVVTTLFVLFLDCHSKVTYDRKSLLINGQRRILISGSIHYPRSTPEMWEDLIKKAKHGGLDVIDTYVFWDVHEPSPGNYNFEGRYDLVRFIKTMQKVGLYANLRIGPYICAEWNFGGIPVWLKYVPGISFRTDNGPFKAAMQGFTQKIVQMMKSEKLFQSQGGPIILSQIENEYGPESGAMGAAGHAYLNWAANMAVGLGTGVPWVMCKENDAPDPVINSCNGFYCDDFSPNKPYKPSMWTESWSGWFTDFGGPIHQRPVQDLAFAVARFIQKGGSYVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLVRQPKYSHLKELHKAIKRCEHALVSSDPTVTPLGTLQQAHVFSAGTTGCAAFLANYHLKSAATVVFNNRHYDLPPWSISILPDCITSVFNTANVGTQTSVVKMSPVDSRFSWETYDEDLSSLDESSRITAAGLLEHLNVTRDTSDYLWYITSVDISSSESFLRGGHKPNINVQSAGHAVHVFANGQFLGSAFGTRKQRSCTFNGPVNLHAGANKIALLSVTVGLPNVGRHYETWETGITGPVVLHGLDHGPKDLSHNKWSYQVGLKGEAVNLVSPNGVSANDWVQDSLATPSRSQLKWYKAYFNTPEGNEPLALDLGSMGKGQVWINGQSIGRYWMAYAKGDCNSCNYSGTFRPAKCQLGCGQPTQRWYHVPRSWLKPTKNLIVVFEELGGNPWKISLVKRTVHTAAAR