Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064021.t1 | XP_013453216.1 | 97.3 | 184 | 5 | 0 | 1 | 184 | 35 | 218 | 7.70E-96 | 359.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064021.t1 | Q8GYD2 | 71.0 | 186 | 52 | 1 | 1 | 184 | 35 | 220 | 1.9e-71 | 270.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064021.t1 | A0A072UBP5 | 97.3 | 184 | 5 | 0 | 1 | 184 | 35 | 218 | 5.6e-96 | 359.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene042624 | MS.gene064021 | PPI |
| MS.gene59695 | MS.gene064021 | PPI |
| MS.gene053883 | MS.gene064021 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064021.t1 | MTR_6g090585 | 97.283 | 184 | 5 | 0 | 1 | 184 | 35 | 218 | 2.80e-135 | 377 |
| MS.gene064021.t1 | MTR_6g090585 | 97.283 | 184 | 5 | 0 | 1 | 184 | 1 | 184 | 3.72e-135 | 375 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064021.t1 | AT4G29170 | 71.910 | 178 | 50 | 0 | 1 | 178 | 35 | 212 | 6.20e-97 | 280 |
| MS.gene064021.t1 | AT4G29170 | 71.910 | 178 | 50 | 0 | 1 | 178 | 20 | 197 | 9.87e-97 | 279 |
| MS.gene064021.t1 | AT4G29170 | 73.950 | 119 | 31 | 0 | 1 | 119 | 35 | 153 | 2.28e-60 | 185 |
Find 34 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAGATGAATTTGACTATT+TGG | 0.177522 | 6.1:+79149424 | MS.gene064021:CDS |
| GTTTGCCTCAGGTATACTTC+TGG | 0.305839 | 6.1:+79147747 | MS.gene064021:intron |
| CTGACTAATCACACCCTTCT+TGG | 0.326573 | 6.1:-79147174 | None:intergenic |
| TCCTAGCTGCGCTGGAAATC+AGG | 0.370421 | 6.1:+79147775 | MS.gene064021:CDS |
| TGACTAATCACACCCTTCTT+GGG | 0.388123 | 6.1:-79147173 | None:intergenic |
| CTCGTTATGCTTCAGCTGAA+TGG | 0.403450 | 6.1:-79148187 | None:intergenic |
| TAAAGATGTTGTCCAAAGTT+TGG | 0.424035 | 6.1:+79147202 | MS.gene064021:CDS |
| GCTGAAGCATAACGAGTTGA+AGG | 0.448016 | 6.1:+79148194 | MS.gene064021:CDS |
| CTCACATTGCTCGACAAGTT+GGG | 0.470737 | 6.1:-79147993 | None:intergenic |
| CTTGTTTCAAAAGATAAGAT+AGG | 0.479340 | 6.1:+79147236 | MS.gene064021:CDS |
| CTCATTGCTTCAAAGGCAGC+AGG | 0.480603 | 6.1:-79148337 | None:intergenic |
| GGTCATCATCCACCAAACTT+TGG | 0.481752 | 6.1:-79147214 | None:intergenic |
| GCAATGTGAGGCACTAAAGA+AGG | 0.484694 | 6.1:+79148006 | MS.gene064021:CDS |
| CCTCACATTGCTCGACAAGT+TGG | 0.509517 | 6.1:-79147994 | None:intergenic |
| AAAGAACTTCCCTCAGGCTA+AGG | 0.520012 | 6.1:+79148705 | MS.gene064021:CDS |
| TGAGAAGATGGGCCCCAAGA+AGG | 0.520689 | 6.1:+79147160 | None:intergenic |
| GCAGCAGCTAACAGATGGAC+AGG | 0.530552 | 6.1:+79148504 | MS.gene064021:CDS |
| AGATGTTGTCCAAAGTTTGG+TGG | 0.534526 | 6.1:+79147205 | MS.gene064021:CDS |
| TTCTTAACTCATTGCTTCAA+AGG | 0.538990 | 6.1:-79148344 | None:intergenic |
| GAGAAGATGGGCCCCAAGAA+GGG | 0.551371 | 6.1:+79147161 | None:intergenic |
| CTCATGCAGCAGCTAACAGA+TGG | 0.556525 | 6.1:+79148499 | MS.gene064021:CDS |
| TGGAGTCTTCCTAGCTGCGC+TGG | 0.556716 | 6.1:+79147767 | MS.gene064021:CDS |
| GAAGCTGTTCCTTAGCCTGA+GGG | 0.565831 | 6.1:-79148714 | None:intergenic |
| AAAAGATAAGATAGGCACTT+CGG | 0.587768 | 6.1:+79147244 | MS.gene064021:CDS |
| GACTAATCACACCCTTCTTG+GGG | 0.593541 | 6.1:-79147172 | None:intergenic |
| GTGTTCAAAGAACTTCCCTC+AGG | 0.594722 | 6.1:+79148699 | MS.gene064021:CDS |
| CAATGTGAGGCACTAAAGAA+GGG | 0.596193 | 6.1:+79148007 | MS.gene064021:CDS |
| ACCTGATTTCCAGCGCAGCT+AGG | 0.611658 | 6.1:-79147776 | None:intergenic |
| AACTGCAAAACAGTGGTACA+CGG | 0.615147 | 6.1:+79147966 | MS.gene064021:CDS |
| TGAAGCTGTTCCTTAGCCTG+AGG | 0.616772 | 6.1:-79148715 | None:intergenic |
| GCTTCAGAACATGTACCAAG+AGG | 0.670511 | 6.1:+79148732 | MS.gene064021:CDS |
| GGCACTAAAGAAGGGACGTG+AGG | 0.681032 | 6.1:+79148015 | MS.gene064021:CDS |
| CCAACTTGTCGAGCAATGTG+AGG | 0.684357 | 6.1:+79147994 | MS.gene064021:CDS |
| GATTCTGAACTGCAAAACAG+TGG | 0.686674 | 6.1:+79147959 | MS.gene064021:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAATGCAATGTA+AGG | - | chr6.1:79148123-79148142 | None:intergenic | 15.0% |
| !! | AAATAACGATACATATAAAA+TGG | - | chr6.1:79148384-79148403 | None:intergenic | 15.0% |
| !! | CAAATAAACCAATTTAAATA+GGG | + | chr6.1:79147655-79147674 | MS.gene064021:intron | 15.0% |
| !! | CTTTAGGTAATATTAATAAA+AGG | - | chr6.1:79149304-79149323 | None:intergenic | 15.0% |
| !! | TCAAATAAACCAATTTAAAT+AGG | + | chr6.1:79147654-79147673 | MS.gene064021:intron | 15.0% |
| !!! | ATATTTTTATCTTTTTGTTG+TGG | + | chr6.1:79148635-79148654 | MS.gene064021:intron | 15.0% |
| !!! | TATTATGAAATTTCTCATTT+TGG | + | chr6.1:79148593-79148612 | MS.gene064021:intron | 15.0% |
| !! | CTTATTTACTCAATACAATT+TGG | + | chr6.1:79149248-79149267 | MS.gene064021:intron | 20.0% |
| !! | TCTAAGAATAGATAATTTGA+CGG | - | chr6.1:79149345-79149364 | None:intergenic | 20.0% |
| !!! | ATTTTTTGAATGACCTTTAA+TGG | + | chr6.1:79148863-79148882 | MS.gene064021:intron | 20.0% |
| !!! | GTAGTGTTAAATTTTGAAAT+AGG | - | chr6.1:79149011-79149030 | None:intergenic | 20.0% |
| !!! | TATTGAGTAAATAAGCATTT+TGG | - | chr6.1:79149243-79149262 | None:intergenic | 20.0% |
| !!! | TTGCTGTTTCATAAATTTAA+GGG | + | chr6.1:79149185-79149204 | MS.gene064021:intron | 20.0% |
| !!! | TTTGCTGTTTCATAAATTTA+AGG | + | chr6.1:79149184-79149203 | MS.gene064021:intron | 20.0% |
| !!! | TTTTTGTTGTGGATAAAAAA+TGG | + | chr6.1:79148646-79148665 | MS.gene064021:intron | 20.0% |
| ! | AAAAGTCATAACATGTAACA+TGG | - | chr6.1:79147381-79147400 | None:intergenic | 25.0% |
| ! | AACAGATGAATTTGACTATT+TGG | + | chr6.1:79149424-79149443 | MS.gene064021:CDS | 25.0% |
| ! | AAGTCATATCATTCCATTAA+AGG | - | chr6.1:79148879-79148898 | None:intergenic | 25.0% |
| ! | ATGATGTAATTAGGTTACAT+TGG | - | chr6.1:79147897-79147916 | None:intergenic | 25.0% |
| ! | ATTTGATTCCTAAAAAAGCA+GGG | - | chr6.1:79148083-79148102 | None:intergenic | 25.0% |
| ! | CTTGTTTCAAAAGATAAGAT+AGG | + | chr6.1:79147236-79147255 | MS.gene064021:CDS | 25.0% |
| ! | TAATAAAAGGACATGTAATG+TGG | - | chr6.1:79149291-79149310 | None:intergenic | 25.0% |
| ! | TCCTTTAAATTGATCAATGT+CGG | + | chr6.1:79148976-79148995 | MS.gene064021:intron | 25.0% |
| ! | TGATGTAATTAGGTTACATT+GGG | - | chr6.1:79147896-79147915 | None:intergenic | 25.0% |
| ! | TTTGTCTGAATACTTTCATT+GGG | + | chr6.1:79148418-79148437 | MS.gene064021:intron | 25.0% |
| !! | ATGTTACATGTTATGACTTT+TGG | + | chr6.1:79147380-79147399 | MS.gene064021:intron | 25.0% |
| !! | GATTAAGGCTCTTTAATTTA+AGG | + | chr6.1:79149155-79149174 | MS.gene064021:intron | 25.0% |
| !!! | CTATCTTATCTTTTGAAACA+AGG | - | chr6.1:79147238-79147257 | None:intergenic | 25.0% |
| !!! | TGATGTATTGGTATTGATTT+TGG | + | chr6.1:79148455-79148474 | MS.gene064021:intron | 25.0% |
| !!! | TTATGAACGAGATATTTTGA+TGG | + | chr6.1:79149120-79149139 | MS.gene064021:intron | 25.0% |
| AAAAGATAAGATAGGCACTT+CGG | + | chr6.1:79147244-79147263 | MS.gene064021:CDS | 30.0% | |
| ACCGACATTGATCAATTTAA+AGG | - | chr6.1:79148980-79148999 | None:intergenic | 30.0% | |
| ATTGATCAATGCTTACGATT+TGG | - | chr6.1:79148925-79148944 | None:intergenic | 30.0% | |
| CATTTGATTCCTAAAAAAGC+AGG | - | chr6.1:79148084-79148103 | None:intergenic | 30.0% | |
| CCAACATATCAACATAAAGA+TGG | - | chr6.1:79147841-79147860 | None:intergenic | 30.0% | |
| CCATCTTTATGTTGATATGT+TGG | + | chr6.1:79147838-79147857 | MS.gene064021:intron | 30.0% | |
| GTGTTTGCAATGATGTAATT+AGG | - | chr6.1:79147906-79147925 | None:intergenic | 30.0% | |
| GTTTGTCTGAATACTTTCAT+TGG | + | chr6.1:79148417-79148436 | MS.gene064021:intron | 30.0% | |
| TAAAGATGTTGTCCAAAGTT+TGG | + | chr6.1:79147202-79147221 | MS.gene064021:CDS | 30.0% | |
| TAGGAGCAATAATCAATTAG+AGG | - | chr6.1:79147726-79147745 | None:intergenic | 30.0% | |
| TATAAGCTACAAACCACTTA+TGG | + | chr6.1:79147563-79147582 | MS.gene064021:intron | 30.0% | |
| TCAATATGCATGTCTTTCAT+TGG | + | chr6.1:79149084-79149103 | MS.gene064021:intron | 30.0% | |
| TGCATTGTCCCTATTTAAAT+TGG | - | chr6.1:79147666-79147685 | None:intergenic | 30.0% | |
| TGTAACTCATATCCAGTTAT+TGG | + | chr6.1:79148796-79148815 | MS.gene064021:intron | 30.0% | |
| TTACATTGGGATACAATAGA+GGG | - | chr6.1:79147883-79147902 | None:intergenic | 30.0% | |
| TTCTTAACTCATTGCTTCAA+AGG | - | chr6.1:79148347-79148366 | None:intergenic | 30.0% | |
| TTGTTCATTTCATCCAAACA+AGG | - | chr6.1:79147406-79147425 | None:intergenic | 30.0% | |
| TTTGGAAGAGCTTATGAATA+CGG | - | chr6.1:79147601-79147620 | None:intergenic | 30.0% | |
| ! | AATGGCTTTTAAATCTGCTA+GGG | - | chr6.1:79148172-79148191 | None:intergenic | 30.0% |
| !! | CTCATTTTGGTACTATATGA+TGG | + | chr6.1:79148606-79148625 | MS.gene064021:intron | 30.0% |
| !!! | ATATTTTCACTCTGAAGCAA+TGG | + | chr6.1:79148677-79148696 | MS.gene064021:CDS | 30.0% |
| !!! | CTGCTTTTTTAGGAATCAAA+TGG | + | chr6.1:79148082-79148101 | MS.gene064021:intron | 30.0% |
| !!! | TTTTTTAGGAATCAAATGGC+TGG | + | chr6.1:79148086-79148105 | MS.gene064021:intron | 30.0% |
| AAACTGAAACAGTCCATACA+GGG | - | chr6.1:79147321-79147340 | None:intergenic | 35.0% | |
| AACTGAAATGACTAACCTCT+TGG | - | chr6.1:79148750-79148769 | None:intergenic | 35.0% | |
| AACTGGATATGAGTTACACA+CGG | - | chr6.1:79148794-79148813 | None:intergenic | 35.0% | |
| ATCTGTTATACCAATCTGCA+TGG | - | chr6.1:79149411-79149430 | None:intergenic | 35.0% | |
| CCTAAAAAAGCAGGGAAAAT+TGG | - | chr6.1:79148075-79148094 | None:intergenic | 35.0% | |
| CGAAAAATGCTTAGATTTGC+TGG | + | chr6.1:79147689-79147708 | MS.gene064021:intron | 35.0% | |
| GAAATCAGGTGAACTTCTAT+TGG | + | chr6.1:79147789-79147808 | MS.gene064021:intron | 35.0% | |
| GAACTATATACAAGCATCAG+CGG | - | chr6.1:79147286-79147305 | None:intergenic | 35.0% | |
| GTTACATTGGGATACAATAG+AGG | - | chr6.1:79147884-79147903 | None:intergenic | 35.0% | |
| TAAACTGAAACAGTCCATAC+AGG | - | chr6.1:79147322-79147341 | None:intergenic | 35.0% | |
| TCATCATGACACTGATGTAT+TGG | + | chr6.1:79148443-79148462 | MS.gene064021:intron | 35.0% | |
| TGGAGGGACTAAATTGATTA+AGG | + | chr6.1:79149140-79149159 | MS.gene064021:intron | 35.0% | |
| TTTGGTCCTCGAAATTGTAA+AGG | - | chr6.1:79149225-79149244 | None:intergenic | 35.0% | |
| ! | GAATGGCTTTTAAATCTGCT+AGG | - | chr6.1:79148173-79148192 | None:intergenic | 35.0% |
| ! | TTTTGTCACCTGTATTGTCT+AGG | + | chr6.1:79148553-79148572 | MS.gene064021:intron | 35.0% |
| !! | TAATCAGCTACTGCTTTTGA+TGG | - | chr6.1:79149464-79149483 | None:intergenic | 35.0% |
| !!! | ATTGGTATTGATTTTGGCAG+AGG | + | chr6.1:79148461-79148480 | MS.gene064021:intron | 35.0% |
| !!! | CCAATTTTCCCTGCTTTTTT+AGG | + | chr6.1:79148072-79148091 | MS.gene064021:intron | 35.0% |
| !!! | GAACGAGATATTTTGATGGA+GGG | + | chr6.1:79149124-79149143 | MS.gene064021:intron | 35.0% |
| !!! | TGAACGAGATATTTTGATGG+AGG | + | chr6.1:79149123-79149142 | MS.gene064021:intron | 35.0% |
| !!! | TTATGACTTTTGGCCTTGTT+TGG | + | chr6.1:79147390-79147409 | MS.gene064021:intron | 35.0% |
| !!! | TTTTTAGGATGAACGAGAAG+CGG | + | chr6.1:79148146-79148165 | MS.gene064021:intron | 35.0% |
| AAATTGGCATCTGGTAGAAG+AGG | - | chr6.1:79148059-79148078 | None:intergenic | 40.0% | |
| AACTGCAAAACAGTGGTACA+CGG | + | chr6.1:79147966-79147985 | MS.gene064021:CDS | 40.0% | |
| ACCAAAAGAAGGCCAATAAC+TGG | - | chr6.1:79148811-79148830 | None:intergenic | 40.0% | |
| ACTATGCCAGAACCAAAAGA+AGG | - | chr6.1:79148822-79148841 | None:intergenic | 40.0% | |
| ACTGGATATGAGTTACACAC+GGG | - | chr6.1:79148793-79148812 | None:intergenic | 40.0% | |
| AGATGTTGTCCAAAGTTTGG+TGG | + | chr6.1:79147205-79147224 | MS.gene064021:CDS | 40.0% | |
| AGTATACCTGAGGCAAACAT+AGG | - | chr6.1:79147745-79147764 | None:intergenic | 40.0% | |
| ATCAGAGATAGCTGTGCTTT+AGG | - | chr6.1:79149320-79149339 | None:intergenic | 40.0% | |
| GATTCTGAACTGCAAAACAG+TGG | + | chr6.1:79147959-79147978 | MS.gene064021:CDS | 40.0% | |
| GTCCTCGAAATTGTAAAGGT+CGG | - | chr6.1:79149221-79149240 | None:intergenic | 40.0% | |
| GTTTATGACACGTCCATAAG+TGG | - | chr6.1:79147579-79147598 | None:intergenic | 40.0% | |
| TAAACACACGCGAGATTGTT+TGG | - | chr6.1:79147619-79147638 | None:intergenic | 40.0% | |
| TACCAATCTGCATGGTGAAA+TGG | - | chr6.1:79149403-79149422 | None:intergenic | 40.0% | |
| TCACCTGTATTGTCTAGGAA+GGG | + | chr6.1:79148558-79148577 | MS.gene064021:intron | 40.0% | |
| TGACTAATCACACCCTTCTT+GGG | - | chr6.1:79147176-79147195 | None:intergenic | 40.0% | |
| TGGGATACAATAGAGGGAAA+GGG | - | chr6.1:79147877-79147896 | None:intergenic | 40.0% | |
| TTCTGGCATAGTTGCATCAA+TGG | + | chr6.1:79148830-79148849 | MS.gene064021:intron | 40.0% | |
| TTGGGATACAATAGAGGGAA+AGG | - | chr6.1:79147878-79147897 | None:intergenic | 40.0% | |
| ! | AAGCATAACGAGTTGAAGGT+TGG | + | chr6.1:79148198-79148217 | MS.gene064021:intron | 40.0% |
| ! | CAATGTGAGGCACTAAAGAA+GGG | + | chr6.1:79148007-79148026 | MS.gene064021:CDS | 40.0% |
| ! | CTTGTGTTATTGTCCCTGTA+TGG | + | chr6.1:79147305-79147324 | MS.gene064021:intron | 40.0% |
| ! | GATCAATGCTTACGATTTGG+AGG | - | chr6.1:79148922-79148941 | None:intergenic | 40.0% |
| !!! | TATTGGCCTTCTTTTGGTTC+TGG | + | chr6.1:79148813-79148832 | MS.gene064021:intron | 40.0% |
| !!! | TCCAGTTATTGGCCTTCTTT+TGG | + | chr6.1:79148807-79148826 | MS.gene064021:intron | 40.0% |
| AAAGAACTTCCCTCAGGCTA+AGG | + | chr6.1:79148705-79148724 | MS.gene064021:CDS | 45.0% | |
| AAGCAGGGAAAATTGGCATC+TGG | - | chr6.1:79148068-79148087 | None:intergenic | 45.0% | |
| ATTGCTCCTATGTTTGCCTC+AGG | + | chr6.1:79147736-79147755 | MS.gene064021:intron | 45.0% | |
| CACCATTTCACCATGCAGAT+TGG | + | chr6.1:79149398-79149417 | MS.gene064021:intron | 45.0% | |
| CTCACATTGCTCGACAAGTT+GGG | - | chr6.1:79147996-79148015 | None:intergenic | 45.0% | |
| CTCGTTATGCTTCAGCTGAA+TGG | - | chr6.1:79148190-79148209 | None:intergenic | 45.0% | |
| CTGACTAATCACACCCTTCT+TGG | - | chr6.1:79147177-79147196 | None:intergenic | 45.0% | |
| CTGGATATGAGTTACACACG+GGG | - | chr6.1:79148792-79148811 | None:intergenic | 45.0% | |
| GACCGACCTTTACAATTTCG+AGG | + | chr6.1:79149216-79149235 | MS.gene064021:intron | 45.0% | |
| GACTAATCACACCCTTCTTG+GGG | - | chr6.1:79147175-79147194 | None:intergenic | 45.0% | |
| GCTTCAGAACATGTACCAAG+AGG | + | chr6.1:79148732-79148751 | MS.gene064021:CDS | 45.0% | |
| GGTCATCATCCACCAAACTT+TGG | - | chr6.1:79147217-79147236 | None:intergenic | 45.0% | |
| GTCACCTGTATTGTCTAGGA+AGG | + | chr6.1:79148557-79148576 | MS.gene064021:intron | 45.0% | |
| GTGTTCAAAGAACTTCCCTC+AGG | + | chr6.1:79148699-79148718 | MS.gene064021:CDS | 45.0% | |
| GTTTGCCTCAGGTATACTTC+TGG | + | chr6.1:79147747-79147766 | MS.gene064021:intron | 45.0% | |
| TATTGTCTAGGAAGGGAGAG+TGG | + | chr6.1:79148565-79148584 | MS.gene064021:intron | 45.0% | |
| TCTCCCTTCCTAGACAATAC+AGG | - | chr6.1:79148564-79148583 | None:intergenic | 45.0% | |
| ! | AGACTCCAGAAGTATACCTG+AGG | - | chr6.1:79147755-79147774 | None:intergenic | 45.0% |
| ! | GCAATGTGAGGCACTAAAGA+AGG | + | chr6.1:79148006-79148025 | MS.gene064021:CDS | 45.0% |
| ! | GCTGAAGCATAACGAGTTGA+AGG | + | chr6.1:79148194-79148213 | MS.gene064021:CDS | 45.0% |
| !! | GCTACTGCTTTTGATGGAAG+AGG | - | chr6.1:79149458-79149477 | None:intergenic | 45.0% |
| !!! | ATTTTTTTTTTTTTCTTTTT+AGG | + | chr6.1:79148131-79148150 | MS.gene064021:intron | 5.0% |
| CCAACTTGTCGAGCAATGTG+AGG | + | chr6.1:79147994-79148013 | MS.gene064021:CDS | 50.0% | |
| CCTCACATTGCTCGACAAGT+TGG | - | chr6.1:79147997-79148016 | None:intergenic | 50.0% | |
| CTCATGCAGCAGCTAACAGA+TGG | + | chr6.1:79148499-79148518 | MS.gene064021:CDS | 50.0% | |
| CTCATTGCTTCAAAGGCAGC+AGG | - | chr6.1:79148340-79148359 | None:intergenic | 50.0% | |
| GAAGCTGTTCCTTAGCCTGA+GGG | - | chr6.1:79148717-79148736 | None:intergenic | 50.0% | |
| GCAAACACGATGTGCAGCTT+AGG | + | chr6.1:79147918-79147937 | MS.gene064021:intron | 50.0% | |
| TGAAGCTGTTCCTTAGCCTG+AGG | - | chr6.1:79148718-79148737 | None:intergenic | 50.0% | |
| ACCTGATTTCCAGCGCAGCT+AGG | - | chr6.1:79147779-79147798 | None:intergenic | 55.0% | |
| CACACGGGGATTGCAGATTG+AGG | - | chr6.1:79148778-79148797 | None:intergenic | 55.0% | |
| GCAGCAGCTAACAGATGGAC+AGG | + | chr6.1:79148504-79148523 | MS.gene064021:CDS | 55.0% | |
| GGCACTAAAGAAGGGACGTG+AGG | + | chr6.1:79148015-79148034 | MS.gene064021:CDS | 55.0% | |
| TCCTAGCTGCGCTGGAAATC+AGG | + | chr6.1:79147775-79147794 | MS.gene064021:CDS | 55.0% | |
| TGGAGTCTTCCTAGCTGCGC+TGG | + | chr6.1:79147767-79147786 | MS.gene064021:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 79147167 | 79149484 | 79147167 | ID=MS.gene064021 |
| chr6.1 | mRNA | 79147167 | 79149484 | 79147167 | ID=MS.gene064021.t1;Parent=MS.gene064021 |
| chr6.1 | exon | 79147167 | 79147265 | 79147167 | ID=MS.gene064021.t1.exon1;Parent=MS.gene064021.t1 |
| chr6.1 | CDS | 79147167 | 79147265 | 79147167 | ID=cds.MS.gene064021.t1;Parent=MS.gene064021.t1 |
| chr6.1 | exon | 79147758 | 79147796 | 79147758 | ID=MS.gene064021.t1.exon2;Parent=MS.gene064021.t1 |
| chr6.1 | CDS | 79147758 | 79147796 | 79147758 | ID=cds.MS.gene064021.t1;Parent=MS.gene064021.t1 |
| chr6.1 | exon | 79147935 | 79148042 | 79147935 | ID=MS.gene064021.t1.exon3;Parent=MS.gene064021.t1 |
| chr6.1 | CDS | 79147935 | 79148042 | 79147935 | ID=cds.MS.gene064021.t1;Parent=MS.gene064021.t1 |
| chr6.1 | exon | 79148153 | 79148215 | 79148153 | ID=MS.gene064021.t1.exon4;Parent=MS.gene064021.t1 |
| chr6.1 | CDS | 79148153 | 79148215 | 79148153 | ID=cds.MS.gene064021.t1;Parent=MS.gene064021.t1 |
| chr6.1 | exon | 79148307 | 79148358 | 79148307 | ID=MS.gene064021.t1.exon5;Parent=MS.gene064021.t1 |
| chr6.1 | CDS | 79148307 | 79148358 | 79148307 | ID=cds.MS.gene064021.t1;Parent=MS.gene064021.t1 |
| chr6.1 | exon | 79148481 | 79148525 | 79148481 | ID=MS.gene064021.t1.exon6;Parent=MS.gene064021.t1 |
| chr6.1 | CDS | 79148481 | 79148525 | 79148481 | ID=cds.MS.gene064021.t1;Parent=MS.gene064021.t1 |
| chr6.1 | exon | 79148674 | 79148753 | 79148674 | ID=MS.gene064021.t1.exon7;Parent=MS.gene064021.t1 |
| chr6.1 | CDS | 79148674 | 79148753 | 79148674 | ID=cds.MS.gene064021.t1;Parent=MS.gene064021.t1 |
| chr6.1 | exon | 79149416 | 79149484 | 79149416 | ID=MS.gene064021.t1.exon8;Parent=MS.gene064021.t1 |
| chr6.1 | CDS | 79149416 | 79149484 | 79149416 | ID=cds.MS.gene064021.t1;Parent=MS.gene064021.t1 |
| Gene Sequence |
| Protein sequence |
