Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064286.t1 | AES79079.2 | 95.1 | 329 | 16 | 0 | 1 | 329 | 22 | 350 | 1.20E-162 | 582.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064286.t1 | Q9FME2 | 38.5 | 338 | 177 | 5 | 1 | 329 | 15 | 330 | 3.3e-49 | 197.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064286.t1 | A0A072TZ72 | 95.1 | 329 | 16 | 0 | 1 | 329 | 15 | 343 | 8.4e-163 | 582.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene063501 | MS.gene064286 | PPI |
| MS.gene044456 | MS.gene064286 | PPI |
| MS.gene033053 | MS.gene064286 | PPI |
| MS.gene064286 | MS.gene044455 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064286.t1 | MTR_7g055610 | 95.137 | 329 | 16 | 0 | 1 | 329 | 22 | 350 | 0.0 | 607 |
| MS.gene064286.t1 | MTR_7g057520 | 95.137 | 329 | 16 | 0 | 1 | 329 | 15 | 343 | 0.0 | 607 |
| MS.gene064286.t1 | MTR_7g013840 | 40.634 | 347 | 173 | 9 | 1 | 329 | 17 | 348 | 1.50e-68 | 223 |
| MS.gene064286.t1 | MTR_7g013840 | 40.634 | 347 | 173 | 9 | 1 | 329 | 17 | 348 | 1.81e-68 | 223 |
| MS.gene064286.t1 | MTR_4g109640 | 39.943 | 348 | 167 | 8 | 1 | 329 | 17 | 341 | 1.85e-65 | 213 |
| MS.gene064286.t1 | MTR_4g109640 | 39.943 | 348 | 167 | 8 | 1 | 329 | 17 | 341 | 2.37e-65 | 212 |
| MS.gene064286.t1 | MTR_4g109640 | 38.770 | 374 | 186 | 9 | 1 | 355 | 17 | 366 | 2.85e-64 | 212 |
| MS.gene064286.t1 | MTR_4g083150 | 37.079 | 356 | 178 | 8 | 1 | 329 | 15 | 351 | 5.50e-62 | 206 |
| MS.gene064286.t1 | MTR_7g098440 | 31.169 | 385 | 218 | 12 | 1 | 355 | 13 | 380 | 5.93e-38 | 142 |
| MS.gene064286.t1 | MTR_1g045800 | 29.661 | 354 | 208 | 11 | 1 | 329 | 14 | 351 | 5.47e-32 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064286.t1 | AT3G25150 | 46.591 | 352 | 144 | 10 | 1 | 329 | 19 | 349 | 2.54e-88 | 275 |
| MS.gene064286.t1 | AT3G25150 | 46.591 | 352 | 144 | 10 | 1 | 329 | 118 | 448 | 9.21e-88 | 276 |
| MS.gene064286.t1 | AT5G60980 | 37.088 | 364 | 190 | 5 | 1 | 351 | 15 | 352 | 9.86e-58 | 195 |
| MS.gene064286.t1 | AT5G60980 | 37.088 | 364 | 190 | 5 | 1 | 351 | 15 | 352 | 9.86e-58 | 195 |
| MS.gene064286.t1 | AT5G60980 | 38.596 | 342 | 171 | 5 | 1 | 329 | 15 | 330 | 4.79e-57 | 193 |
| MS.gene064286.t1 | AT5G60980 | 38.596 | 342 | 171 | 5 | 1 | 329 | 15 | 330 | 4.79e-57 | 193 |
| MS.gene064286.t1 | AT5G48650 | 37.069 | 348 | 185 | 9 | 1 | 325 | 16 | 352 | 9.79e-54 | 184 |
| MS.gene064286.t1 | AT1G13730 | 33.535 | 331 | 191 | 7 | 1 | 331 | 15 | 316 | 4.48e-42 | 152 |
| MS.gene064286.t1 | AT1G13730 | 33.535 | 331 | 191 | 7 | 1 | 331 | 15 | 316 | 4.48e-42 | 152 |
| MS.gene064286.t1 | AT2G03640 | 33.934 | 333 | 178 | 10 | 1 | 327 | 15 | 311 | 8.30e-41 | 149 |
| MS.gene064286.t1 | AT2G03640 | 34.132 | 334 | 175 | 11 | 1 | 327 | 15 | 310 | 9.14e-40 | 147 |
| MS.gene064286.t1 | AT2G03640 | 34.132 | 334 | 175 | 11 | 1 | 327 | 15 | 310 | 1.02e-39 | 146 |
| MS.gene064286.t1 | AT2G03640 | 34.132 | 334 | 175 | 11 | 1 | 327 | 15 | 310 | 1.02e-39 | 146 |
| MS.gene064286.t1 | AT2G03640 | 34.132 | 334 | 175 | 11 | 1 | 327 | 15 | 310 | 1.02e-39 | 146 |
| MS.gene064286.t1 | AT1G69250 | 31.751 | 337 | 200 | 10 | 1 | 334 | 13 | 322 | 5.82e-39 | 143 |
| MS.gene064286.t1 | AT1G69250 | 32.530 | 332 | 194 | 10 | 1 | 329 | 13 | 317 | 1.33e-37 | 140 |
| MS.gene064286.t1 | AT5G43960 | 29.134 | 381 | 235 | 12 | 1 | 356 | 11 | 381 | 9.07e-28 | 114 |
| MS.gene064286.t1 | AT3G07250 | 30.746 | 335 | 184 | 13 | 1 | 325 | 10 | 306 | 1.46e-27 | 114 |
| MS.gene064286.t1 | AT5G43960 | 29.310 | 290 | 172 | 11 | 92 | 356 | 41 | 322 | 8.54e-20 | 90.5 |
| MS.gene064286.t1 | AT3G55540 | 33.600 | 125 | 77 | 4 | 1 | 119 | 32 | 156 | 1.20e-13 | 71.6 |
Find 0 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | + | 14961:8349-8330 | MS.gene064286:intergenic | 0.0% |
| !! | TAAAAAAAACAAAAAAAACA+GGG | + | 14961:8647-8666 | MS.gene064286:intergenic | 10.0% |
| !! | TAATAACAAATAAATTGAAT+AGG | - | 14961:9614-9633 | MS.gene064286:intron | 10.0% |
| !! | TTAAAAAAAACAAAAAAAAC+AGG | + | 14961:8648-8667 | MS.gene064286:intergenic | 10.0% |
| !!! | TAGTTTTCAATTTTAAAAAA+AGG | - | 14961:9418-9437 | MS.gene064286:intron | 10.0% |
| !! | AACTTAGATTCTAATAAATA+TGG | - | 14961:7148-7167 | MS.gene064286:intron | 15.0% |
| !! | ACAATGGAAATAAATTTAAA+AGG | + | 14961:7103-7122 | MS.gene064286:intergenic | 15.0% |
| !!! | CTCATTATTAATTTGTTTTT+AGG | - | 14961:8996-9015 | MS.gene064286:CDS | 15.0% |
| !! | AAAAATATTCTTACTTGGAA+TGG | + | 14961:8957-8976 | MS.gene064286:intergenic | 20.0% |
| !! | AAGACAATGATTAATTTAGT+CGG | - | 14961:9676-9695 | MS.gene064286:intron | 20.0% |
| !! | ACAGAAAAAATATTCTTACT+TGG | + | 14961:8962-8981 | MS.gene064286:intergenic | 20.0% |
| !! | ATAACAAGTAACATTTACAA+TGG | + | 14961:7984-8003 | MS.gene064286:intergenic | 20.0% |
| !! | ATTGAAATAAATTCGTGAAA+AGG | + | 14961:9126-9145 | MS.gene064286:intergenic | 20.0% |
| !! | GCTATTCAATTTATTTGAAA+GGG | - | 14961:8510-8529 | MS.gene064286:CDS | 20.0% |
| !! | TAGAATCTAAGTTAACAAAT+GGG | + | 14961:7141-7160 | MS.gene064286:intergenic | 20.0% |
| !! | TATTTATTGATGTGTTCAAT+TGG | - | 14961:8467-8486 | MS.gene064286:CDS | 20.0% |
| !! | TTAGAATCTAAGTTAACAAA+TGG | + | 14961:7142-7161 | MS.gene064286:intergenic | 20.0% |
| ! | AAGATATTGTACAAACCAAT+TGG | + | 14961:6914-6933 | MS.gene064286:intergenic | 25.0% |
| ! | AATATCACTATGATAAACAC+AGG | + | 14961:8451-8470 | MS.gene064286:intergenic | 25.0% |
| ! | ATATCACTATGATAAACACA+GGG | + | 14961:8450-8469 | MS.gene064286:intergenic | 25.0% |
| ! | CTTGAACATATTATCAACAA+GGG | + | 14961:8558-8577 | MS.gene064286:intergenic | 25.0% |
| ! | GATAATATGTTCAAGAAGTT+TGG | - | 14961:8563-8582 | MS.gene064286:intron | 25.0% |
| ! | GGCTATTCAATTTATTTGAA+AGG | - | 14961:8509-8528 | MS.gene064286:CDS | 25.0% |
| ! | TAACATTTACAATGGAAACT+CGG | + | 14961:7976-7995 | MS.gene064286:intergenic | 25.0% |
| ! | TCAATATTCATATCTCCAAT+TGG | - | 14961:6896-6915 | MS.gene064286:intron | 25.0% |
| ! | TCCTCTAATAATTTCAAACT+AGG | + | 14961:9253-9272 | MS.gene064286:intergenic | 25.0% |
| ! | TCTAGTATAAGTACTAATGA+AGG | - | 14961:8271-8290 | MS.gene064286:intron | 25.0% |
| ! | TCTTGAACATATTATCAACA+AGG | + | 14961:8559-8578 | MS.gene064286:intergenic | 25.0% |
| ! | TGTTGAGATAAATAGAAGAA+AGG | - | 14961:8868-8887 | MS.gene064286:CDS | 25.0% |
| ! | TTCTTCTATTTATCTCAACA+TGG | + | 14961:8868-8887 | MS.gene064286:intergenic | 25.0% |
| !! | TGTTGATGAAAATGAAATCA+AGG | - | 14961:7486-7505 | MS.gene064286:intron | 25.0% |
| !!! | AAATGCAATTTTGAGAGATT+TGG | - | 14961:9074-9093 | MS.gene064286:intron | 25.0% |
| !!! | CAAACGTTTTTAGTCTAAAA+TGG | - | 14961:9451-9470 | MS.gene064286:intron | 25.0% |
| AAAATGCACACAAGAAACAA+GGG | + | 14961:6861-6880 | MS.gene064285:intergenic | 30.0% | |
| AAATGAAGAATACTGTCATG+AGG | - | 14961:9531-9550 | MS.gene064286:intron | 30.0% | |
| AACAAGCAACTTAAGTTAAC+AGG | + | 14961:7608-7627 | MS.gene064286:intergenic | 30.0% | |
| AAGAAATTACACCAATGCAT+AGG | + | 14961:6995-7014 | MS.gene064286:intergenic | 30.0% | |
| AAGTTCTTCGTAGATATTTG+TGG | + | 14961:9968-9987 | MS.gene064286:intergenic | 30.0% | |
| AGTATAAGTACTAATGAAGG+TGG | - | 14961:8274-8293 | MS.gene064286:intron | 30.0% | |
| AGTTCTTCGTAGATATTTGT+GGG | + | 14961:9967-9986 | MS.gene064286:intergenic | 30.0% | |
| ATACTAGAACCATTTGTTTC+TGG | + | 14961:8259-8278 | MS.gene064286:intergenic | 30.0% | |
| ATAGTAGTACTGTTCAACAA+AGG | + | 14961:6632-6651 | MS.gene064286:intergenic | 30.0% | |
| CATAGCCACCAATATATATT+CGG | + | 14961:9314-9333 | MS.gene064286:intergenic | 30.0% | |
| CTAAATCCAATCAAGAGTTA+CGG | + | 14961:9363-9382 | MS.gene064286:intergenic | 30.0% | |
| GCATTTAGATGATCATACAA+TGG | + | 14961:7119-7138 | MS.gene064286:intergenic | 30.0% | |
| TAAAATGCACACAAGAAACA+AGG | + | 14961:6862-6881 | MS.gene064286:intergenic | 30.0% | |
| TATGTGCACCGAATATATAT+TGG | - | 14961:9303-9322 | MS.gene064286:CDS | 30.0% | |
| TATTCTTACTTGGAATGGAT+TGG | + | 14961:8952-8971 | MS.gene064286:intergenic | 30.0% | |
| TATTCTTGACTCTATTACAC+TGG | - | 14961:8003-8022 | MS.gene064286:intron | 30.0% | |
| ! | ATTCTTACTTGGAATGGATT+GGG | + | 14961:8951-8970 | MS.gene064286:intergenic | 30.0% |
| ! | ATTTAGTCGGATACTCATTT+TGG | - | 14961:9689-9708 | MS.gene064286:intron | 30.0% |
| ! | ATTTTGTGGAGTTAATAACC+AGG | - | 14961:9719-9738 | MS.gene064286:intron | 30.0% |
| ! | CTTTATAGCTGTCTATGTTT+TGG | - | 14961:6810-6829 | MS.gene064286:intron | 30.0% |
| ! | GCCTAGTTTGAAATTATTAG+AGG | - | 14961:9249-9268 | MS.gene064286:CDS | 30.0% |
| ! | TTTAGTCGGATACTCATTTT+GGG | - | 14961:9690-9709 | MS.gene064286:intron | 30.0% |
| !! | ATTTTGGGTGATCTATTTTG+TGG | - | 14961:9705-9724 | MS.gene064286:intron | 30.0% |
| !!! | TAACCATGTTTTAATACCCT+TGG | - | 14961:6948-6967 | MS.gene064286:intron | 30.0% |
| !!! | TTAAGGCGTGGTTTTATTAA+GGG | - | 14961:7563-7582 | MS.gene064286:CDS | 30.0% |
| !!! | TTGTTATTTTCCTCTGTAAC+TGG | - | 14961:8102-8121 | MS.gene064286:CDS | 30.0% |
| AAATGCACACAAGAAACAAG+GGG | + | 14961:6860-6879 | MS.gene064286:intergenic | 35.0% | |
| AAGTCTACAATCCAGAAAAG+GGG | - | 14961:7727-7746 | MS.gene064286:intron | 35.0% | |
| AAGTCTTAAGTGCCCATAAT+TGG | - | 14961:9795-9814 | MS.gene064286:intron | 35.0% | |
| AATAAGCCCCAACCAATTAT+GGG | + | 14961:9810-9829 | MS.gene064286:intergenic | 35.0% | |
| AATTGAATAGGAGTTGCTGT+CGG | - | 14961:9626-9645 | MS.gene064286:intron | 35.0% | |
| ACCAATTATGAGCACTCAAA+AGG | + | 14961:9837-9856 | MS.gene064286:intergenic | 35.0% | |
| AGAAGTCTACAATCCAGAAA+AGG | - | 14961:7725-7744 | MS.gene064286:intron | 35.0% | |
| AGAATATGAGTGAGTAGTGA+TGG | + | 14961:8821-8840 | MS.gene064286:intergenic | 35.0% | |
| AGTGAAACTACTAGGAAAAG+AGG | + | 14961:8727-8746 | MS.gene064286:intergenic | 35.0% | |
| ATATCCAAAGCAATGTTCAG+AGG | + | 14961:7030-7049 | MS.gene064286:intergenic | 35.0% | |
| ATGTGGTGTTCATAATTGGT+TGG | - | 14961:9909-9928 | MS.gene064286:intron | 35.0% | |
| ATTATGGGCACTTAAGACTT+CGG | + | 14961:9795-9814 | MS.gene064286:intergenic | 35.0% | |
| CTAGCATAGAAGTAGAGATA+AGG | + | 14961:9401-9420 | MS.gene064286:intergenic | 35.0% | |
| GAAGTCTACAATCCAGAAAA+GGG | - | 14961:7726-7745 | MS.gene064286:intron | 35.0% | |
| GAATGGTAACATGATGCTTA+AGG | - | 14961:7546-7565 | MS.gene064286:intron | 35.0% | |
| GACAAGAAGATACTGTCAAT+GGG | - | 14961:7280-7299 | MS.gene064286:intron | 35.0% | |
| GGAAACAATCAAGAAACTGA+AGG | - | 14961:8295-8314 | MS.gene064286:intron | 35.0% | |
| GTAGCTTAAGGTAATGAAAG+AGG | - | 14961:8135-8154 | MS.gene064286:CDS | 35.0% | |
| TAACTCCCTTCCTAAAAGAA+TGG | + | 14961:8771-8790 | MS.gene064286:intergenic | 35.0% | |
| TAAGAACCGTAACTCTTGAT+TGG | - | 14961:9354-9373 | MS.gene064286:CDS | 35.0% | |
| TATAGAACAGACACTTGCAA+TGG | + | 14961:7916-7935 | MS.gene064286:intergenic | 35.0% | |
| TATATGCGACACAAATGATC+CGG | + | 14961:10017-10036 | MS.gene064286:intergenic | 35.0% | |
| TGACAAGAAGATACTGTCAA+TGG | - | 14961:7279-7298 | MS.gene064286:intron | 35.0% | |
| TTAAGTGCCCATAATTGGTT+GGG | - | 14961:9800-9819 | MS.gene064286:intron | 35.0% | |
| ! | AGAGATTTGGAGTCAAACAT+TGG | - | 14961:9087-9106 | MS.gene064286:intron | 35.0% |
| ! | ATATATATTGGTGGCTATGC+AGG | - | 14961:9315-9334 | MS.gene064286:CDS | 35.0% |
| ! | ATGGAGGCATATGATTTCTT+CGG | + | 14961:7897-7916 | MS.gene064286:intergenic | 35.0% |
| ! | GAGATTTGGAGTCAAACATT+GGG | - | 14961:9088-9107 | MS.gene064286:intron | 35.0% |
| ! | GCTGCTAGCTAATAACTTTT+TGG | - | 14961:8674-8693 | MS.gene064286:intron | 35.0% |
| ! | TATGGATTGAGTGTTAGAAG+TGG | - | 14961:7166-7185 | MS.gene064286:intron | 35.0% |
| ! | TTATTTTCCTCTGTAACTGG+TGG | - | 14961:8105-8124 | MS.gene064286:CDS | 35.0% |
| !! | AAAGGCATCAGCAAGTAATT+AGG | + | 14961:7085-7104 | MS.gene064286:intergenic | 35.0% |
| !! | AAGCATAGTGCCATTCTTTT+AGG | - | 14961:8758-8777 | MS.gene064286:CDS | 35.0% |
| !! | ATAGTGCCATTCTTTTAGGA+AGG | - | 14961:8762-8781 | MS.gene064286:CDS | 35.0% |
| !! | TAGTGCCATTCTTTTAGGAA+GGG | - | 14961:8763-8782 | MS.gene064286:CDS | 35.0% |
| !!! | CTTAAGGCGTGGTTTTATTA+AGG | - | 14961:7562-7581 | MS.gene064286:CDS | 35.0% |
| !!! | TTTCTTTTGGTGCCCATAAT+TGG | - | 14961:9870-9889 | MS.gene064286:intron | 35.0% |
| AAAACCTATGCACATGCTCA+GGG | + | 14961:6669-6688 | MS.gene064285:intergenic | 40.0% | |
| AAGGAACCTGATCATGACAT+TGG | - | 14961:7505-7524 | MS.gene064286:intron | 40.0% | |
| AATGATTCACAGAAAGCAGC+TGG | - | 14961:7807-7826 | MS.gene064286:intron | 40.0% | |
| ACAAAGTAGCCTTTCTCTTG+AGG | + | 14961:7445-7464 | MS.gene064286:intergenic | 40.0% | |
| ACACCAATGCATAGGCATAT+GGG | + | 14961:6987-7006 | MS.gene064286:intergenic | 40.0% | |
| ACGAGAGATCGTAAAGTAAG+AGG | - | 14961:8897-8916 | MS.gene064286:CDS | 40.0% | |
| AGAAAGAGCAAGAAAGGAAG+AGG | + | 14961:7944-7963 | MS.gene064286:intergenic | 40.0% | |
| AGAATGGCACTATGCTTATG+AGG | + | 14961:8755-8774 | MS.gene064286:intergenic | 40.0% | |
| AGCATCATGTTACCATTCTC+AGG | + | 14961:7544-7563 | MS.gene064286:intergenic | 40.0% | |
| ATTTATTTGAAAGGGCTGCC+TGG | - | 14961:8518-8537 | MS.gene064286:intron | 40.0% | |
| CAAACCTCTGAACATTGCTT+TGG | - | 14961:7023-7042 | MS.gene064286:intron | 40.0% | |
| CAATAAGCCCCAACCAATTA+TGG | + | 14961:9811-9830 | MS.gene064286:intergenic | 40.0% | |
| CAATCAAGAAACTGAAGGTC+TGG | - | 14961:8300-8319 | MS.gene064286:intron | 40.0% | |
| CACTGGGTTTATGATAGGAA+AGG | - | 14961:7378-7397 | MS.gene064286:intron | 40.0% | |
| CATCAGCAAGTAATTAGGTG+GGG | + | 14961:7080-7099 | MS.gene064286:intergenic | 40.0% | |
| CCTATTTCATTTCACCAAGC+AGG | - | 14961:7252-7271 | MS.gene064286:intron | 40.0% | |
| CGCATATAGGTCAACCTTTA+AGG | - | 14961:10029-10048 | MS.gene064286:CDS | 40.0% | |
| CTTAAGTGCCCATAATTGGT+TGG | - | 14961:9799-9818 | MS.gene064286:intron | 40.0% | |
| CTTCGGCACTTCTTCAATTT+GGG | + | 14961:7880-7899 | MS.gene064286:intergenic | 40.0% | |
| GAAAGAGCAAGAAAGGAAGA+GGG | + | 14961:7943-7962 | MS.gene064286:intergenic | 40.0% | |
| GAAGATCCAACACTGAAAGA+AGG | + | 14961:7638-7657 | MS.gene064286:intergenic | 40.0% | |
| GAGTCTAGAAAGAGCAAGAA+AGG | + | 14961:7950-7969 | MS.gene064286:intergenic | 40.0% | |
| GCATCAGCAAGTAATTAGGT+GGG | + | 14961:7081-7100 | MS.gene064286:intergenic | 40.0% | |
| GGAATTTCAGCAAGAACCTT+AGG | + | 14961:7786-7805 | MS.gene064286:intergenic | 40.0% | |
| GGATCATTTGTGTCGCATAT+AGG | - | 14961:10016-10035 | MS.gene064286:CDS | 40.0% | |
| GGGTATGTGGTGTTCATAAT+TGG | - | 14961:9905-9924 | MS.gene064286:intron | 40.0% | |
| GGGTTATAGTGAACTTAGTG+CGG | - | 14961:7300-7319 | MS.gene064286:intron | 40.0% | |
| GTGCACCGAATATATATTGG+TGG | - | 14961:9306-9325 | MS.gene064286:CDS | 40.0% | |
| GTGTAATCAGTGTCTCTAGT+AGG | - | 14961:9648-9667 | MS.gene064286:intron | 40.0% | |
| TAAAACCTATGCACATGCTC+AGG | + | 14961:6670-6689 | MS.gene064286:intergenic | 40.0% | |
| TAAGTGCCCATAATTGGTTG+GGG | - | 14961:9801-9820 | MS.gene064286:intron | 40.0% | |
| TAATCAGTGTCTCTAGTAGG+TGG | - | 14961:9651-9670 | MS.gene064286:intron | 40.0% | |
| TACACCAATGCATAGGCATA+TGG | + | 14961:6988-7007 | MS.gene064286:intergenic | 40.0% | |
| TACCAAGATGTCAGTAAGCT+TGG | - | 14961:6688-6707 | MS.gene064286:CDS | 40.0% | |
| TCTTCGGCACTTCTTCAATT+TGG | + | 14961:7881-7900 | MS.gene064286:intergenic | 40.0% | |
| TGAGTGCTCATAATTGGTTG+AGG | - | 14961:9839-9858 | MS.gene064286:intron | 40.0% | |
| TGTTCCTGATGATTCACAGA+AGG | - | 14961:7839-7858 | MS.gene064286:intron | 40.0% | |
| TTATGGGCACTTAAGACTTC+GGG | + | 14961:9794-9813 | MS.gene064286:intergenic | 40.0% | |
| TTCACAGAAGGTAGCTGAAT+TGG | - | 14961:7851-7870 | MS.gene064286:intron | 40.0% | |
| TTCATAATTGGTTGGAGCCA+CGG | - | 14961:9917-9936 | MS.gene064286:CDS | 40.0% | |
| TTGGTCACTGGGTTTATGAT+AGG | - | 14961:7373-7392 | MS.gene064286:intron | 40.0% | |
| ! | AGAACTTTTGTCGCCCTTTA+AGG | - | 14961:9981-10000 | MS.gene064286:CDS | 40.0% |
| ! | ATACCTTTGCTGTCCTAACT+TGG | + | 14961:8610-8629 | MS.gene064286:intergenic | 40.0% |
| ! | CCTGCTTGGTGAAATGAAAT+AGG | + | 14961:7255-7274 | MS.gene064286:intergenic | 40.0% |
| ! | GAACTTTTGTCGCCCTTTAA+GGG | - | 14961:9982-10001 | MS.gene064286:CDS | 40.0% |
| ! | GCTGCTTTCTGTGAATCATT+AGG | + | 14961:7807-7826 | MS.gene064286:intergenic | 40.0% |
| !! | GACAGCAAAGGTATTTCACT+TGG | - | 14961:8616-8635 | MS.gene064286:intron | 40.0% |
| !! | GAGCCAAGGGTATTAAAACA+TGG | + | 14961:6954-6973 | MS.gene064286:intergenic | 40.0% |
| !! | GCCTTTTGAGTGCTCATAAT+TGG | - | 14961:9833-9852 | MS.gene064286:intron | 40.0% |
| !! | TACTTGGAATGGATTGGGTT+GGG | + | 14961:8946-8965 | MS.gene064286:intergenic | 40.0% |
| !! | TCTTTTAGGAAGGGAGTTAG+TGG | - | 14961:8772-8791 | MS.gene064286:CDS | 40.0% |
| !! | TGAGGCTCGTTGTTTTCTTT+TGG | - | 14961:9857-9876 | MS.gene064286:intron | 40.0% |
| !! | TTACTTGGAATGGATTGGGT+TGG | + | 14961:8947-8966 | MS.gene064286:intergenic | 40.0% |
| !! | TTTGGTGCCCATAATTGGTT+GGG | - | 14961:9875-9894 | MS.gene064286:intron | 40.0% |
| !!! | TTTTGGTGCCCATAATTGGT+TGG | - | 14961:9874-9893 | MS.gene064286:intron | 40.0% |
| AACAGATCCACCAGTTACAG+AGG | + | 14961:8115-8134 | MS.gene064286:intergenic | 45.0% | |
| AAGTTTGGCCCTATCAAGAG+TGG | - | 14961:8578-8597 | MS.gene064286:intron | 45.0% | |
| AATAGCCCTCAGCTGTCAAA+AGG | + | 14961:8496-8515 | MS.gene064286:intergenic | 45.0% | |
| ACACCCATATGCCTATGCAT+TGG | - | 14961:6981-7000 | MS.gene064286:intron | 45.0% | |
| ACTCTTGTGCATCCACAGAT+AGG | + | 14961:7330-7349 | MS.gene064286:intergenic | 45.0% | |
| AGAACAGACACTTGCAATGG+AGG | + | 14961:7913-7932 | MS.gene064286:intergenic | 45.0% | |
| AGGTGGGAAGTGAAACTACT+AGG | + | 14961:8735-8754 | MS.gene064286:intergenic | 45.0% | |
| ATAATTGGTTGGGACTCGTG+GGG | - | 14961:9885-9904 | MS.gene064286:intron | 45.0% | |
| ATATCTGTGACTGCTGAGGA+TGG | - | 14961:7687-7706 | MS.gene064286:intron | 45.0% | |
| ATGGCACTATGCTTATGAGG+TGG | + | 14961:8752-8771 | MS.gene064286:intergenic | 45.0% | |
| CAATTATGAACACTCCACCG+TGG | + | 14961:9937-9956 | MS.gene064286:intergenic | 45.0% | |
| CACGAGTCCCAACCAATTAT+GGG | + | 14961:9885-9904 | MS.gene064286:intergenic | 45.0% | |
| CATAATTGGTTGGGACTCGT+GGG | - | 14961:9884-9903 | MS.gene064286:intron | 45.0% | |
| CATGTTACCATTCTCAGGAG+AGG | + | 14961:7539-7558 | MS.gene064286:intergenic | 45.0% | |
| CCAACACTGAAAGAAGGTTG+AGG | + | 14961:7632-7651 | MS.gene064286:intergenic | 45.0% | |
| CCTCAACCTTCTTTCAGTGT+TGG | - | 14961:7629-7648 | MS.gene064286:intron | 45.0% | |
| CCTGAACCAGATGGTATCAT+CGG | - | 14961:6715-6734 | MS.gene064286:intron | 45.0% | |
| CGGATATCACCTCCCTTAAA+GGG | + | 14961:9997-10016 | MS.gene064286:intergenic | 45.0% | |
| CTTCTTGTCAATCTCCTGCT+TGG | + | 14961:7269-7288 | MS.gene064286:intergenic | 45.0% | |
| GACCAAGCTTACTGACATCT+TGG | + | 14961:6693-6712 | MS.gene064286:intergenic | 45.0% | |
| GAGTCATTGTCTTGGTCACT+GGG | - | 14961:7362-7381 | MS.gene064286:intron | 45.0% | |
| GCAAATATCTGTGACTGCTG+AGG | - | 14961:7683-7702 | MS.gene064286:intron | 45.0% | |
| GCAAGTGTCTGTTGAAGAAG+AGG | - | 14961:7749-7768 | MS.gene064286:intron | 45.0% | |
| GCAGTCACAGATATTTGCTC+TGG | + | 14961:7681-7700 | MS.gene064286:intergenic | 45.0% | |
| GCTACCTTCTGTGAATCATC+AGG | + | 14961:7846-7865 | MS.gene064286:intergenic | 45.0% | |
| GGAGATCCAATGTCATGATC+AGG | + | 14961:7514-7533 | MS.gene064286:intergenic | 45.0% | |
| GGCATCAGCAAGTAATTAGG+TGG | + | 14961:7082-7101 | MS.gene064286:intergenic | 45.0% | |
| GGTGCAGTTTCTCTCTAAGT+GGG | + | 14961:8847-8866 | MS.gene064286:intergenic | 45.0% | |
| GGTGGATCTGTTGTAGCTTA+AGG | - | 14961:8123-8142 | MS.gene064286:CDS | 45.0% | |
| GTAACATGATGCTTAAGGCG+TGG | - | 14961:7551-7570 | MS.gene064286:intron | 45.0% | |
| GTTGTCCTCTCATACCTCAT+GGG | - | 14961:6832-6851 | MS.gene064286:intron | 45.0% | |
| TCAGCAAGAACCTTAGGAAC+AGG | + | 14961:7780-7799 | MS.gene064286:intergenic | 45.0% | |
| TCCAGTGTGCCAGAAACAAA+TGG | - | 14961:8247-8266 | MS.gene064286:intron | 45.0% | |
| TGCATACATTCATTGTCGCG+TGG | - | 14961:9749-9768 | MS.gene064286:intron | 45.0% | |
| TGGCACTATGCTTATGAGGT+GGG | + | 14961:8751-8770 | MS.gene064286:intergenic | 45.0% | |
| TGGTGCAGTTTCTCTCTAAG+TGG | + | 14961:8848-8867 | MS.gene064286:intergenic | 45.0% | |
| TGTCCAAGTTAGGACAGCAA+AGG | - | 14961:8604-8623 | MS.gene064286:intron | 45.0% | |
| TTCCTTGCTCCTCAAGAGAA+AGG | - | 14961:7433-7452 | MS.gene064286:intron | 45.0% | |
| TTCGGGTCCCAACCAATTAT+GGG | + | 14961:9777-9796 | MS.gene064286:intergenic | 45.0% | |
| ! | ATGCACAAGAGTCTTTTGGC+GGG | - | 14961:7338-7357 | MS.gene064286:intron | 45.0% |
| ! | CACGGTGGAGTGTTCATAAT+TGG | - | 14961:9935-9954 | MS.gene064286:CDS | 45.0% |
| ! | CCTTTAAGGGAGGTGATATC+CGG | - | 14961:9995-10014 | MS.gene064286:CDS | 45.0% |
| ! | GATGCACAAGAGTCTTTTGG+CGG | - | 14961:7337-7356 | MS.gene064286:intron | 45.0% |
| ! | GTGGATGCACAAGAGTCTTT+TGG | - | 14961:7334-7353 | MS.gene064286:intron | 45.0% |
| !! | ACCATTTGTTTCTGGCACAC+TGG | + | 14961:8251-8270 | MS.gene064286:intergenic | 45.0% |
| !! | TTTGTTTCTGGCACACTGGA+TGG | + | 14961:8247-8266 | MS.gene064286:intergenic | 45.0% |
| AAAGCCCTGAGCATGTGCAT+AGG | - | 14961:6662-6681 | MS.gene064286:CDS | 50.0% | |
| AGAAGCAGCTGTCATTACGG+AGG | + | 14961:8173-8192 | MS.gene064286:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGCTCA+CGG | + | 14961:6758-6777 | MS.gene064286:intergenic | 50.0% | |
| AGAGGAAGCTCCTGTTCCTA+AGG | - | 14961:7767-7786 | MS.gene064286:intron | 50.0% | |
| AGCCTTTCTCTTGAGGAGCA+AGG | + | 14961:7438-7457 | MS.gene064286:intergenic | 50.0% | |
| AGGGCATGTGTAGCATTTCC+AGG | + | 14961:8539-8558 | MS.gene064286:intergenic | 50.0% | |
| ATAATTGGTTGGAGCCACGG+TGG | - | 14961:9920-9939 | MS.gene064286:CDS | 50.0% | |
| CATCGGCATCACAACCACAA+TGG | - | 14961:6732-6751 | MS.gene064286:intron | 50.0% | |
| CCACGAGTCCCAACCAATTA+TGG | + | 14961:9886-9905 | MS.gene064286:intergenic | 50.0% | |
| CCATAATTGGTTGGGACTCG+TGG | - | 14961:9883-9902 | MS.gene064286:intron | 50.0% | |
| CCCAGAAGCAGCTGTCATTA+CGG | + | 14961:8176-8195 | MS.gene064286:intergenic | 50.0% | |
| CCGGATATCACCTCCCTTAA+AGG | + | 14961:9998-10017 | MS.gene064286:intergenic | 50.0% | |
| CCGTAATGACAGCTGCTTCT+GGG | - | 14961:8173-8192 | MS.gene064286:intron | 50.0% | |
| CGTGGTGCCCATAATTGGTT+GGG | - | 14961:9767-9786 | MS.gene064286:intron | 50.0% | |
| CTAGTGCTGTCAAACAGCCA+CGG | + | 14961:9212-9231 | MS.gene064286:intergenic | 50.0% | |
| CTTCGGGTCCCAACCAATTA+TGG | + | 14961:9778-9797 | MS.gene064286:intergenic | 50.0% | |
| GAATGTATGCATGCGACACC+TGG | + | 14961:9740-9759 | MS.gene064286:intergenic | 50.0% | |
| GACTGCTGAGGATGGTGATA+GGG | - | 14961:7695-7714 | MS.gene064286:intron | 50.0% | |
| GAGTATAGCTCCTTGTACCG+TGG | - | 14961:9192-9211 | MS.gene064286:CDS | 50.0% | |
| GCAAGTAATTAGGTGGGGTC+TGG | + | 14961:7075-7094 | MS.gene064286:intergenic | 50.0% | |
| GGAGTCATTGTCTTGGTCAC+TGG | - | 14961:7361-7380 | MS.gene064286:intron | 50.0% | |
| GGGTGTAGAGTAAGAGCCAA+GGG | + | 14961:6967-6986 | MS.gene064286:intergenic | 50.0% | |
| GGTTGTCCTCTCATACCTCA+TGG | - | 14961:6831-6850 | MS.gene064286:intron | 50.0% | |
| GTGATGCCGATGATACCATC+TGG | + | 14961:6724-6743 | MS.gene064286:intergenic | 50.0% | |
| TAGTGCGGAGATCCTATCTG+TGG | - | 14961:7315-7334 | MS.gene064286:intron | 50.0% | |
| TCCGTAATGACAGCTGCTTC+TGG | - | 14961:8172-8191 | MS.gene064286:intron | 50.0% | |
| TGACTGCTGAGGATGGTGAT+AGG | - | 14961:7694-7713 | MS.gene064286:intron | 50.0% | |
| TGGGTGTAGAGTAAGAGCCA+AGG | + | 14961:6968-6987 | MS.gene064286:intergenic | 50.0% | |
| TGTCAAACAGCCACGGTACA+AGG | + | 14961:9205-9224 | MS.gene064286:intergenic | 50.0% | |
| TTACCATTCTCAGGAGAGGC+AGG | + | 14961:7535-7554 | MS.gene064286:intergenic | 50.0% | |
| TTTGGCCCTATCAAGAGTGG+CGG | - | 14961:8581-8600 | MS.gene064286:intron | 50.0% | |
| ! | ACAGACACTTGCCCCTTTTC+TGG | + | 14961:7741-7760 | MS.gene064286:intergenic | 50.0% |
| ! | AGTGTTGGATCTTCCTGTGC+TGG | - | 14961:7644-7663 | MS.gene064286:intron | 50.0% |
| ! | CCGATGATACCATCTGGTTC+AGG | + | 14961:6718-6737 | MS.gene064286:intergenic | 50.0% |
| ! | GGTTGCCTTTTGACAGCTGA+GGG | - | 14961:8488-8507 | MS.gene064286:CDS | 50.0% |
| ! | TGCACAAGAGTCTTTTGGCG+GGG | - | 14961:7339-7358 | MS.gene064286:intron | 50.0% |
| ! | TGGTTGCCTTTTGACAGCTG+AGG | - | 14961:8487-8506 | MS.gene064286:CDS | 50.0% |
| !! | AGAAACAAGGGGTACCCATG+AGG | + | 14961:6849-6868 | MS.gene064286:intergenic | 50.0% |
| !! | CTTTTGTCGCCCTTTAAGGG+AGG | - | 14961:9985-10004 | MS.gene064286:CDS | 50.0% |
| AGAGTGGCGGTGTCCAAGTT+AGG | - | 14961:8594-8613 | MS.gene064286:intron | 55.0% | |
| CTTGGTCGTCCTGAACCAGA+TGG | - | 14961:6706-6725 | MS.gene064286:intron | 55.0% | |
| GCAGCTGTCATTACGGAGGA+CGG | + | 14961:8169-8188 | MS.gene064286:intergenic | 55.0% | |
| GCGTGGTGCCCATAATTGGT+TGG | - | 14961:9766-9785 | MS.gene064286:intron | 55.0% | |
| GGAACTTGTGTCTCCAGCAC+AGG | + | 14961:7660-7679 | MS.gene064286:intergenic | 55.0% | |
| GGACACCGCCACTCTTGATA+GGG | + | 14961:8589-8608 | MS.gene064286:intergenic | 55.0% | |
| GGGTACCCATGAGGTATGAG+AGG | + | 14961:6840-6859 | MS.gene064286:intergenic | 55.0% | |
| TCTCCTGCCTCTCCTGAGAA+TGG | - | 14961:7529-7548 | MS.gene064286:intron | 55.0% | |
| TCTGGCACACTGGATGGTGA+AGG | + | 14961:8241-8260 | MS.gene064286:intergenic | 55.0% | |
| TGGACACCGCCACTCTTGAT+AGG | + | 14961:8590-8609 | MS.gene064286:intergenic | 55.0% | |
| TGTCGCGTGGTGCCCATAAT+TGG | - | 14961:9762-9781 | MS.gene064286:intron | 55.0% | |
| ! | GCACAAGAGTCTTTTGGCGG+GGG | - | 14961:7340-7359 | MS.gene064286:intron | 55.0% |
| GAGAGAGCTCACGGCCATTG+TGG | + | 14961:6749-6768 | MS.gene064286:intergenic | 60.0% | |
| GTTGGGACTCGTGGGGTATG+TGG | - | 14961:9892-9911 | MS.gene064286:intron | 60.0% | |
| TGGCGGGGGAGTCATTGTCT+TGG | - | 14961:7354-7373 | MS.gene064286:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 14961 | gene | 6619 | 10050 | 6619 | ID=MS.gene064286 |
| 14961 | mRNA | 6619 | 10050 | 6619 | ID=MS.gene064286.t1;Parent=MS.gene064286 |
| 14961 | exon | 9913 | 10050 | 9913 | ID=MS.gene064286.t1.exon1;Parent=MS.gene064286.t1 |
| 14961 | CDS | 9913 | 10050 | 9913 | ID=cds.MS.gene064286.t1;Parent=MS.gene064286.t1 |
| 14961 | exon | 9119 | 9395 | 9119 | ID=MS.gene064286.t1.exon2;Parent=MS.gene064286.t1 |
| 14961 | CDS | 9119 | 9395 | 9119 | ID=cds.MS.gene064286.t1;Parent=MS.gene064286.t1 |
| 14961 | exon | 8752 | 9023 | 8752 | ID=MS.gene064286.t1.exon3;Parent=MS.gene064286.t1 |
| 14961 | CDS | 8752 | 9023 | 8752 | ID=cds.MS.gene064286.t1;Parent=MS.gene064286.t1 |
| 14961 | exon | 8353 | 8530 | 8353 | ID=MS.gene064286.t1.exon4;Parent=MS.gene064286.t1 |
| 14961 | CDS | 8353 | 8530 | 8353 | ID=cds.MS.gene064286.t1;Parent=MS.gene064286.t1 |
| 14961 | exon | 8044 | 8165 | 8044 | ID=MS.gene064286.t1.exon5;Parent=MS.gene064286.t1 |
| 14961 | CDS | 8044 | 8165 | 8044 | ID=cds.MS.gene064286.t1;Parent=MS.gene064286.t1 |
| 14961 | exon | 7560 | 7606 | 7560 | ID=MS.gene064286.t1.exon6;Parent=MS.gene064286.t1 |
| 14961 | CDS | 7560 | 7606 | 7560 | ID=cds.MS.gene064286.t1;Parent=MS.gene064286.t1 |
| 14961 | exon | 6619 | 6724 | 6619 | ID=MS.gene064286.t1.exon7;Parent=MS.gene064286.t1 |
| 14961 | CDS | 6619 | 6724 | 6619 | ID=cds.MS.gene064286.t1;Parent=MS.gene064286.t1 |
| Gene Sequence |
| Protein sequence |
