Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064445.t1 | KEH19918.1 | 96 | 275 | 11 | 0 | 1 | 275 | 2 | 276 | 1.20E-148 | 535.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064445.t1 | Q500U8 | 50.2 | 271 | 127 | 3 | 8 | 273 | 8 | 275 | 2.1e-69 | 263.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064445.t1 | A0A072U2D5 | 96.0 | 275 | 11 | 0 | 1 | 275 | 2 | 276 | 8.5e-149 | 535.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051838 | MS.gene064445 | 0.827477 | 1.53E-54 | -1.69E-46 |
| MS.gene052346 | MS.gene064445 | 0.802391 | 5.74E-49 | -1.69E-46 |
| MS.gene05494 | MS.gene064445 | 0.812237 | 4.69E-51 | -1.69E-46 |
| MS.gene05666 | MS.gene064445 | 0.807968 | 3.90E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064445.t1 | MTR_8g062110 | 96.000 | 275 | 11 | 0 | 1 | 275 | 11 | 285 | 0.0 | 546 |
| MS.gene064445.t1 | MTR_8g062110 | 96.000 | 275 | 11 | 0 | 1 | 275 | 2 | 276 | 0.0 | 546 |
| MS.gene064445.t1 | MTR_8g062110 | 96.000 | 275 | 11 | 0 | 1 | 275 | 2 | 276 | 0.0 | 546 |
| MS.gene064445.t1 | MTR_8g062110 | 96.000 | 275 | 11 | 0 | 1 | 275 | 2 | 276 | 0.0 | 545 |
| MS.gene064445.t1 | MTR_8g062440 | 89.091 | 275 | 30 | 0 | 1 | 275 | 1 | 275 | 0.0 | 507 |
| MS.gene064445.t1 | MTR_8g062440 | 89.091 | 275 | 30 | 0 | 1 | 275 | 1 | 275 | 0.0 | 506 |
| MS.gene064445.t1 | MTR_8g062440 | 88.406 | 276 | 31 | 1 | 1 | 275 | 1 | 276 | 0.0 | 501 |
| MS.gene064445.t1 | MTR_4g077100 | 73.091 | 275 | 73 | 1 | 2 | 275 | 5 | 279 | 2.79e-151 | 424 |
| MS.gene064445.t1 | MTR_3g005170 | 72.727 | 275 | 74 | 1 | 2 | 275 | 4 | 278 | 5.15e-151 | 423 |
| MS.gene064445.t1 | MTR_4g077100 | 73.091 | 275 | 73 | 1 | 2 | 275 | 5 | 279 | 8.76e-151 | 424 |
| MS.gene064445.t1 | MTR_3g005170 | 72.727 | 275 | 74 | 1 | 2 | 275 | 4 | 278 | 1.16e-150 | 424 |
| MS.gene064445.t1 | MTR_4g077130 | 72.727 | 275 | 74 | 1 | 2 | 275 | 3 | 277 | 5.14e-150 | 422 |
| MS.gene064445.t1 | MTR_3g005210 | 69.630 | 270 | 81 | 1 | 7 | 275 | 5 | 274 | 5.33e-142 | 402 |
| MS.gene064445.t1 | MTR_8g062110 | 97.778 | 180 | 4 | 0 | 96 | 275 | 11 | 190 | 1.04e-129 | 365 |
| MS.gene064445.t1 | MTR_8g062110 | 97.778 | 180 | 4 | 0 | 96 | 275 | 11 | 190 | 1.65e-129 | 367 |
| MS.gene064445.t1 | MTR_3g005170 | 65.091 | 275 | 64 | 2 | 2 | 275 | 4 | 247 | 7.80e-128 | 365 |
| MS.gene064445.t1 | MTR_5g056600 | 47.191 | 267 | 132 | 5 | 9 | 270 | 5 | 267 | 6.60e-79 | 241 |
| MS.gene064445.t1 | MTR_2g101330 | 46.296 | 270 | 140 | 3 | 8 | 273 | 5 | 273 | 1.39e-77 | 238 |
| MS.gene064445.t1 | MTR_4g006940 | 49.077 | 271 | 129 | 5 | 1 | 269 | 10 | 273 | 7.93e-77 | 235 |
| MS.gene064445.t1 | MTR_4g006940 | 49.077 | 271 | 129 | 5 | 1 | 269 | 10 | 273 | 7.93e-77 | 235 |
| MS.gene064445.t1 | MTR_5g072620 | 46.324 | 272 | 139 | 5 | 6 | 273 | 3 | 271 | 1.13e-76 | 236 |
| MS.gene064445.t1 | MTR_4g006940 | 49.077 | 271 | 129 | 5 | 1 | 269 | 10 | 273 | 7.89e-76 | 234 |
| MS.gene064445.t1 | MTR_1g022440 | 44.128 | 281 | 144 | 7 | 1 | 273 | 1 | 276 | 4.63e-75 | 232 |
| MS.gene064445.t1 | MTR_2g104960 | 48.339 | 271 | 131 | 5 | 5 | 273 | 17 | 280 | 7.52e-73 | 227 |
| MS.gene064445.t1 | MTR_1g022445 | 42.456 | 285 | 143 | 6 | 1 | 273 | 1 | 276 | 6.37e-72 | 224 |
| MS.gene064445.t1 | MTR_3g031650 | 41.544 | 272 | 154 | 4 | 6 | 274 | 3 | 272 | 9.46e-72 | 222 |
| MS.gene064445.t1 | MTR_3g031650 | 41.544 | 272 | 154 | 4 | 6 | 274 | 3 | 272 | 3.53e-71 | 222 |
| MS.gene064445.t1 | MTR_4g009040 | 43.542 | 271 | 145 | 6 | 6 | 272 | 11 | 277 | 5.79e-67 | 211 |
| MS.gene064445.t1 | MTR_4g009040 | 43.116 | 276 | 145 | 7 | 5 | 272 | 10 | 281 | 3.04e-65 | 207 |
| MS.gene064445.t1 | MTR_4g009690 | 42.751 | 269 | 149 | 4 | 6 | 272 | 11 | 276 | 2.44e-64 | 204 |
| MS.gene064445.t1 | MTR_4g092080 | 40.636 | 283 | 153 | 5 | 4 | 273 | 10 | 290 | 2.89e-64 | 204 |
| MS.gene064445.t1 | MTR_4g081440 | 42.268 | 291 | 133 | 6 | 9 | 272 | 25 | 307 | 1.58e-62 | 201 |
| MS.gene064445.t1 | MTR_4g081440 | 42.268 | 291 | 133 | 6 | 9 | 272 | 21 | 303 | 1.68e-62 | 201 |
| MS.gene064445.t1 | MTR_4g009690 | 42.593 | 270 | 149 | 5 | 6 | 272 | 11 | 277 | 1.71e-62 | 200 |
| MS.gene064445.t1 | MTR_7g074880 | 40.072 | 277 | 156 | 6 | 3 | 273 | 4 | 276 | 6.03e-62 | 198 |
| MS.gene064445.t1 | MTR_2g028620 | 41.935 | 279 | 145 | 10 | 1 | 268 | 1 | 273 | 1.29e-59 | 192 |
| MS.gene064445.t1 | MTR_2g028620 | 41.935 | 279 | 145 | 10 | 1 | 268 | 1 | 273 | 1.36e-59 | 192 |
| MS.gene064445.t1 | MTR_7g074730 | 39.068 | 279 | 158 | 5 | 3 | 273 | 4 | 278 | 1.89e-58 | 189 |
| MS.gene064445.t1 | MTR_7g074820 | 39.643 | 280 | 156 | 5 | 3 | 273 | 4 | 279 | 4.03e-58 | 189 |
| MS.gene064445.t1 | MTR_7g074710 | 40.072 | 277 | 156 | 5 | 3 | 273 | 4 | 276 | 5.77e-58 | 188 |
| MS.gene064445.t1 | MTR_7g074850 | 38.929 | 280 | 158 | 5 | 3 | 273 | 4 | 279 | 1.45e-57 | 187 |
| MS.gene064445.t1 | MTR_0685s0030 | 65.517 | 116 | 39 | 1 | 161 | 275 | 1 | 116 | 1.49e-47 | 156 |
| MS.gene064445.t1 | MTR_0685s0030 | 65.517 | 116 | 39 | 1 | 161 | 275 | 1 | 116 | 1.68e-47 | 154 |
| MS.gene064445.t1 | MTR_3g011130 | 62.931 | 116 | 42 | 1 | 99 | 213 | 30 | 145 | 1.18e-44 | 148 |
| MS.gene064445.t1 | MTR_4g023730 | 32.862 | 283 | 177 | 5 | 1 | 274 | 1 | 279 | 2.92e-44 | 152 |
| MS.gene064445.t1 | MTR_4g077150 | 47.458 | 177 | 42 | 3 | 98 | 274 | 21 | 146 | 3.61e-43 | 145 |
| MS.gene064445.t1 | MTR_0164s0070 | 54.762 | 126 | 56 | 1 | 8 | 132 | 5 | 130 | 9.60e-43 | 145 |
| MS.gene064445.t1 | MTR_7g074870 | 35.897 | 234 | 142 | 3 | 45 | 273 | 8 | 238 | 2.14e-41 | 144 |
| MS.gene064445.t1 | MTR_5g029990 | 29.151 | 271 | 168 | 7 | 7 | 270 | 11 | 264 | 3.81e-32 | 120 |
| MS.gene064445.t1 | MTR_6g406250 | 28.309 | 272 | 177 | 7 | 7 | 267 | 54 | 318 | 2.64e-29 | 114 |
| MS.gene064445.t1 | MTR_2g013230 | 30.241 | 291 | 177 | 7 | 8 | 275 | 8 | 295 | 5.50e-29 | 113 |
| MS.gene064445.t1 | MTR_6g406250 | 30.808 | 198 | 123 | 4 | 7 | 196 | 54 | 245 | 2.19e-28 | 109 |
| MS.gene064445.t1 | MTR_7g117190 | 32.215 | 298 | 161 | 13 | 8 | 274 | 7 | 294 | 3.99e-28 | 110 |
| MS.gene064445.t1 | MTR_7g117190 | 31.633 | 294 | 168 | 11 | 8 | 274 | 7 | 294 | 1.00e-27 | 109 |
| MS.gene064445.t1 | MTR_2g013250 | 30.822 | 292 | 174 | 8 | 8 | 275 | 7 | 294 | 1.35e-27 | 109 |
| MS.gene064445.t1 | MTR_2g013260 | 28.125 | 288 | 187 | 5 | 8 | 275 | 8 | 295 | 8.74e-26 | 103 |
| MS.gene064445.t1 | MTR_2g013260 | 28.125 | 288 | 187 | 5 | 8 | 275 | 8 | 295 | 2.58e-25 | 103 |
| MS.gene064445.t1 | MTR_1g099230 | 68.852 | 61 | 19 | 0 | 99 | 159 | 36 | 96 | 3.40e-24 | 96.3 |
| MS.gene064445.t1 | MTR_8g062490 | 80.435 | 46 | 9 | 0 | 226 | 271 | 66 | 111 | 2.96e-18 | 79.3 |
| MS.gene064445.t1 | MTR_8g062710 | 46.809 | 94 | 38 | 3 | 8 | 100 | 20 | 102 | 1.34e-16 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064445.t1 | AT5G19440 | 68.364 | 275 | 86 | 1 | 2 | 275 | 4 | 278 | 1.26e-140 | 399 |
| MS.gene064445.t1 | AT1G51410 | 66.182 | 275 | 92 | 1 | 2 | 275 | 3 | 277 | 4.63e-136 | 387 |
| MS.gene064445.t1 | AT1G09480 | 61.957 | 276 | 104 | 1 | 1 | 275 | 1 | 276 | 3.59e-120 | 347 |
| MS.gene064445.t1 | AT1G09480 | 61.957 | 276 | 104 | 1 | 1 | 275 | 48 | 323 | 7.08e-120 | 348 |
| MS.gene064445.t1 | AT1G09490 | 61.957 | 276 | 104 | 1 | 1 | 275 | 1 | 276 | 9.12e-119 | 343 |
| MS.gene064445.t1 | AT1G09510 | 59.783 | 276 | 110 | 1 | 1 | 275 | 1 | 276 | 6.33e-116 | 336 |
| MS.gene064445.t1 | AT1G66800 | 59.926 | 272 | 104 | 2 | 1 | 271 | 1 | 268 | 1.72e-109 | 319 |
| MS.gene064445.t1 | AT1G09500 | 56.318 | 277 | 119 | 2 | 1 | 275 | 1 | 277 | 3.73e-108 | 315 |
| MS.gene064445.t1 | AT1G09500 | 56.318 | 277 | 119 | 2 | 1 | 275 | 1 | 277 | 8.67e-108 | 315 |
| MS.gene064445.t1 | AT1G09490 | 60.086 | 233 | 92 | 1 | 44 | 275 | 13 | 245 | 8.59e-95 | 281 |
| MS.gene064445.t1 | AT4G35420 | 49.814 | 269 | 131 | 2 | 8 | 273 | 8 | 275 | 4.12e-87 | 263 |
| MS.gene064445.t1 | AT1G09500 | 53.138 | 239 | 110 | 2 | 39 | 275 | 5 | 243 | 1.03e-84 | 255 |
| MS.gene064445.t1 | AT5G58490 | 45.290 | 276 | 146 | 4 | 1 | 273 | 2 | 275 | 1.45e-75 | 233 |
| MS.gene064445.t1 | AT1G68540 | 46.067 | 267 | 133 | 6 | 10 | 269 | 6 | 268 | 4.19e-75 | 232 |
| MS.gene064445.t1 | AT1G15950 | 48.148 | 270 | 131 | 6 | 2 | 269 | 7 | 269 | 2.09e-74 | 229 |
| MS.gene064445.t1 | AT1G15950 | 48.148 | 270 | 131 | 6 | 2 | 269 | 7 | 269 | 2.71e-74 | 228 |
| MS.gene064445.t1 | AT1G15950 | 48.148 | 270 | 131 | 6 | 2 | 269 | 7 | 269 | 5.50e-74 | 228 |
| MS.gene064445.t1 | AT1G15950 | 48.315 | 267 | 129 | 6 | 5 | 269 | 10 | 269 | 8.88e-74 | 229 |
| MS.gene064445.t1 | AT1G15950 | 48.315 | 267 | 129 | 6 | 5 | 269 | 10 | 269 | 8.88e-74 | 229 |
| MS.gene064445.t1 | AT1G15950 | 48.148 | 270 | 131 | 6 | 2 | 269 | 7 | 269 | 1.54e-73 | 228 |
| MS.gene064445.t1 | AT1G80820 | 47.761 | 268 | 131 | 6 | 4 | 269 | 4 | 264 | 2.32e-71 | 221 |
| MS.gene064445.t1 | AT1G80820 | 47.761 | 268 | 131 | 6 | 4 | 269 | 4 | 264 | 1.71e-70 | 220 |
| MS.gene064445.t1 | AT2G02400 | 42.491 | 273 | 146 | 7 | 6 | 273 | 4 | 270 | 4.11e-70 | 219 |
| MS.gene064445.t1 | AT5G42800 | 42.705 | 281 | 148 | 6 | 1 | 273 | 1 | 276 | 6.06e-69 | 218 |
| MS.gene064445.t1 | AT1G25460 | 42.642 | 265 | 143 | 5 | 10 | 269 | 6 | 266 | 4.52e-63 | 201 |
| MS.gene064445.t1 | AT2G33590 | 41.573 | 267 | 147 | 6 | 8 | 269 | 9 | 271 | 2.35e-59 | 191 |
| MS.gene064445.t1 | AT2G33600 | 44.151 | 265 | 141 | 5 | 8 | 268 | 9 | 270 | 3.39e-59 | 191 |
| MS.gene064445.t1 | AT4G27250 | 41.036 | 251 | 134 | 4 | 9 | 248 | 14 | 261 | 1.39e-56 | 185 |
| MS.gene064445.t1 | AT1G61720 | 38.078 | 281 | 159 | 4 | 6 | 273 | 11 | 289 | 9.41e-56 | 183 |
| MS.gene064445.t1 | AT4G27250 | 40.996 | 261 | 130 | 6 | 9 | 248 | 14 | 271 | 1.08e-55 | 183 |
| MS.gene064445.t1 | AT1G76470 | 41.791 | 268 | 147 | 5 | 8 | 269 | 7 | 271 | 1.61e-53 | 177 |
| MS.gene064445.t1 | AT2G45400 | 36.786 | 280 | 167 | 3 | 4 | 273 | 36 | 315 | 1.51e-48 | 164 |
| MS.gene064445.t1 | AT2G45400 | 36.786 | 280 | 167 | 3 | 4 | 273 | 36 | 315 | 2.97e-48 | 164 |
| MS.gene064445.t1 | AT2G45400 | 40.183 | 219 | 124 | 2 | 4 | 215 | 36 | 254 | 6.87e-43 | 147 |
| MS.gene064445.t1 | AT2G23910 | 30.651 | 261 | 166 | 7 | 9 | 264 | 11 | 261 | 4.73e-40 | 140 |
| MS.gene064445.t1 | AT2G23910 | 30.651 | 261 | 166 | 7 | 9 | 264 | 11 | 261 | 5.16e-40 | 140 |
| MS.gene064445.t1 | AT2G23910 | 30.651 | 261 | 166 | 7 | 9 | 264 | 11 | 261 | 6.97e-40 | 140 |
| MS.gene064445.t1 | AT4G30470 | 30.418 | 263 | 163 | 6 | 9 | 264 | 11 | 260 | 4.04e-39 | 139 |
| MS.gene064445.t1 | AT1G68540 | 39.024 | 164 | 92 | 4 | 111 | 269 | 1 | 161 | 4.32e-34 | 123 |
| MS.gene064445.t1 | AT1G15950 | 42.197 | 173 | 96 | 3 | 99 | 269 | 1 | 171 | 1.08e-33 | 123 |
| MS.gene064445.t1 | AT2G45400 | 31.950 | 241 | 156 | 2 | 41 | 273 | 18 | 258 | 3.13e-30 | 115 |
| MS.gene064445.t1 | AT2G23910 | 29.464 | 224 | 143 | 7 | 46 | 264 | 14 | 227 | 1.15e-29 | 113 |
| MS.gene064445.t1 | AT5G14700 | 29.804 | 255 | 163 | 7 | 6 | 248 | 53 | 303 | 4.85e-28 | 110 |
| MS.gene064445.t1 | AT5G14700 | 31.841 | 201 | 123 | 5 | 6 | 196 | 53 | 249 | 2.90e-26 | 104 |
| MS.gene064445.t1 | AT4G33360 | 27.273 | 253 | 158 | 7 | 4 | 250 | 11 | 243 | 7.30e-17 | 79.3 |
| MS.gene064445.t1 | AT4G33360 | 27.309 | 249 | 155 | 7 | 8 | 250 | 3 | 231 | 8.15e-17 | 79.3 |
| MS.gene064445.t1 | AT4G33360 | 27.273 | 253 | 158 | 7 | 4 | 250 | 11 | 243 | 9.88e-17 | 79.3 |
Find 60 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCATCCATATGCTTTATT+TGG | 0.080401 | 8.1:-41998068 | None:intergenic |
| GGAGAGGTTGCAACTCTTTA+AGG | 0.141949 | 8.1:+41995014 | MS.gene064445:CDS |
| CCATTTATTAGGTTTAAAAT+TGG | 0.243613 | 8.1:-41996841 | None:intergenic |
| CAGTCTCATACGCCAGAATA+TGG | 0.258064 | 8.1:-41998115 | None:intergenic |
| AGCAAGTGGTCAACCTTATT+AGG | 0.265908 | 8.1:-41994973 | None:intergenic |
| TGTTGCTAACGCCCATATTC+TGG | 0.300399 | 8.1:+41998103 | MS.gene064445:CDS |
| TTTGATTCCCTACATAAATC+TGG | 0.326261 | 8.1:-41996356 | None:intergenic |
| TTGTCTGAAATTTGTAAAGT+TGG | 0.353800 | 8.1:-41998218 | None:intergenic |
| GACCACTTGCTTAAACTTGA+TGG | 0.374425 | 8.1:+41994985 | MS.gene064445:CDS |
| GTCTCATCAACTATGATTCC+AGG | 0.385079 | 8.1:-41996320 | None:intergenic |
| AGCTAGTGGAAGATATTGTT+TGG | 0.390621 | 8.1:+41998142 | MS.gene064445:CDS |
| CTCTTACAACCAGAGCTTAA+CGG | 0.407447 | 8.1:+41996808 | MS.gene064445:CDS |
| AACGAACAGGTGAAGCAGTA+TGG | 0.409489 | 8.1:-41995095 | None:intergenic |
| CCATATGCTTTATTTGGAAA+AGG | 0.409931 | 8.1:-41998062 | None:intergenic |
| ACTCTTTAAGGCGGATCTCT+TGG | 0.410511 | 8.1:+41995026 | MS.gene064445:CDS |
| TGTCTGAAATTTGTAAAGTT+GGG | 0.417946 | 8.1:-41998217 | None:intergenic |
| AGAGGTCCTGCCACCATTGT+TGG | 0.428227 | 8.1:-41996787 | None:intergenic |
| GCAAGCAGGTAATCCTAATA+AGG | 0.431032 | 8.1:+41994960 | MS.gene064445:intron |
| TTTCAGATCCAGATTTATGT+AGG | 0.435231 | 8.1:+41996348 | MS.gene064445:CDS |
| TCCTTTGACTATGTTGTTGA+GGG | 0.439038 | 8.1:+41995057 | MS.gene064445:CDS |
| TTCCTTTGACTATGTTGTTG+AGG | 0.451838 | 8.1:+41995056 | MS.gene064445:CDS |
| GTACACACTTTCGAAGACTT+TGG | 0.455183 | 8.1:+41996705 | MS.gene064445:CDS |
| CTTTGGCTGAGGCTGCTGCC+TGG | 0.462996 | 8.1:+41996722 | MS.gene064445:CDS |
| GAGGTCCTGCCACCATTGTT+GGG | 0.466002 | 8.1:-41996786 | None:intergenic |
| TCAGGCTGAGTTGATTGATC+CGG | 0.473743 | 8.1:+41996184 | MS.gene064445:intron |
| CTGCAGTTGTATATGATACA+AGG | 0.475514 | 8.1:+41996288 | MS.gene064445:CDS |
| CACCATCAAGTTTAAGCAAG+TGG | 0.475735 | 8.1:-41994987 | None:intergenic |
| GTGTGTGTGACAGGTGCTGC+TGG | 0.477693 | 8.1:+41994769 | MS.gene064445:CDS |
| TCAACACTTCCGTTAAGCTC+TGG | 0.486325 | 8.1:-41996817 | None:intergenic |
| GGAAAAGTGGTGTGTGTGAC+AGG | 0.486873 | 8.1:+41994760 | MS.gene064445:CDS |
| AAGGCGGATCTCTTGGAAGA+AGG | 0.495574 | 8.1:+41995033 | MS.gene064445:CDS |
| TATGAGTGGGGAAGGAAAAG+TGG | 0.501831 | 8.1:+41994747 | None:intergenic |
| GTTGATTGATCCGGCACTGA+AGG | 0.508391 | 8.1:+41996193 | MS.gene064445:CDS |
| AGTCTCATACGCCAGAATAT+GGG | 0.517552 | 8.1:-41998114 | None:intergenic |
| TCATTTACGACAAAACGAAC+AGG | 0.531722 | 8.1:-41995108 | None:intergenic |
| TATGAGACTGCTTCAGCTAG+TGG | 0.532203 | 8.1:+41998128 | MS.gene064445:CDS |
| TTAAGAGTTCCCTTCAGTGC+CGG | 0.539925 | 8.1:-41996203 | None:intergenic |
| TTCAGATCCAGATTTATGTA+GGG | 0.546056 | 8.1:+41996349 | MS.gene064445:CDS |
| AGATTTATGTAGGGAATCAA+AGG | 0.549744 | 8.1:+41996358 | MS.gene064445:CDS |
| AAAAGGATTATGAGTGGGGA+AGG | 0.549887 | 8.1:+41994739 | None:intergenic |
| TTCCAAATAAAGCATATGGA+TGG | 0.552811 | 8.1:+41998066 | MS.gene064445:CDS |
| AAGATAACTCGTTTCACAGA+TGG | 0.555240 | 8.1:-41996251 | None:intergenic |
| ACTTTCGAAGACTTTGGCTG+AGG | 0.557625 | 8.1:+41996711 | MS.gene064445:CDS |
| TGACAGTGTAACCACGTTGG+AGG | 0.560969 | 8.1:-41994822 | None:intergenic |
| GCTTAAACTTGATGGTGCAA+AGG | 0.582641 | 8.1:+41994993 | MS.gene064445:CDS |
| ATTAACCCAACAATGGTGGC+AGG | 0.586153 | 8.1:+41996781 | MS.gene064445:CDS |
| ACCCTCAACAACATAGTCAA+AGG | 0.587229 | 8.1:-41995058 | None:intergenic |
| TTAAGCTCTGGTTGTAAGAG+AGG | 0.589725 | 8.1:-41996805 | None:intergenic |
| ATATTGTTTGGCTGAGAGAG+TGG | 0.592698 | 8.1:+41998154 | MS.gene064445:CDS |
| TTGATTGATCCGGCACTGAA+GGG | 0.592808 | 8.1:+41996194 | MS.gene064445:CDS |
| AACTTGATGGTGCAAAGGAG+AGG | 0.594203 | 8.1:+41994998 | MS.gene064445:CDS |
| TGCTATTAACCCAACAATGG+TGG | 0.600626 | 8.1:+41996777 | MS.gene064445:CDS |
| GAATCATAGTTGATGAGACA+TGG | 0.618543 | 8.1:+41996324 | MS.gene064445:CDS |
| TATGTTGTTGAGGGTTGTGA+CGG | 0.623069 | 8.1:+41995066 | MS.gene064445:CDS |
| CTAACTTGGGTCACGAACAG+TGG | 0.644352 | 8.1:-41994848 | None:intergenic |
| GAGGTTGCAACTCTTTAAGG+CGG | 0.649841 | 8.1:+41995017 | MS.gene064445:CDS |
| AAATGAAAACAGCATTGACA+TGG | 0.650659 | 8.1:+41996753 | MS.gene064445:CDS |
| CTCTGACAGTGTAACCACGT+TGG | 0.665690 | 8.1:-41994825 | None:intergenic |
| GGTTGCTATTAACCCAACAA+TGG | 0.678942 | 8.1:+41996774 | MS.gene064445:CDS |
| GTTAAGTTTCTCCTCCAACG+TGG | 0.706690 | 8.1:+41994811 | MS.gene064445:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAATAGATAAAAATATT+TGG | - | chr8.1:41997728-41997747 | None:intergenic | 10.0% |
| !! | TCATAATATATAATGAAATA+TGG | + | chr8.1:41996558-41996577 | MS.gene064445:intron | 10.0% |
| !!! | ACTCTTTATAAAAATATTTT+GGG | + | chr8.1:41995301-41995320 | MS.gene064445:intron | 10.0% |
| !! | AAAAGATTCCTAATTAAATA+AGG | + | chr8.1:41996528-41996547 | MS.gene064445:intron | 15.0% |
| !! | AAATTAAGAACTAAGAAAAT+TGG | + | chr8.1:41995972-41995991 | MS.gene064445:intron | 15.0% |
| !! | AAGAAAAATTACCATTTATT+AGG | - | chr8.1:41996855-41996874 | None:intergenic | 15.0% |
| !! | AAGTAATATAATATATTGGA+TGG | + | chr8.1:41995866-41995885 | MS.gene064445:intron | 15.0% |
| !! | AATTAAGAACTAAGAAAATT+GGG | + | chr8.1:41995973-41995992 | MS.gene064445:intron | 15.0% |
| !! | ATTGATATTAGATAAGATTT+AGG | + | chr8.1:41997748-41997767 | MS.gene064445:intron | 15.0% |
| !!! | ATAAATGGTAATTTTTCTTT+AGG | + | chr8.1:41996856-41996875 | MS.gene064445:intron | 15.0% |
| !!! | CACTCTTTATAAAAATATTT+TGG | + | chr8.1:41995300-41995319 | MS.gene064445:intron | 15.0% |
| !!! | GTAAAATAATAATACAGTTT+TGG | + | chr8.1:41995743-41995762 | MS.gene064445:intron | 15.0% |
| !!! | GTAAAATGTAAATGAAATTT+TGG | + | chr8.1:41995519-41995538 | MS.gene064445:intron | 15.0% |
| !!! | TTTCATTTTGAATAACTTTT+AGG | - | chr8.1:41996398-41996417 | None:intergenic | 15.0% |
| !! | AAAGTTTAATAAACTGCTAA+CGG | + | chr8.1:41997490-41997509 | MS.gene064445:intron | 20.0% |
| !! | AATTTAAAAGAAACTCAAAG+AGG | + | chr8.1:41997373-41997392 | MS.gene064445:intron | 20.0% |
| !! | ATAACATTTATAGTGATTGT+TGG | + | chr8.1:41997822-41997841 | MS.gene064445:intron | 20.0% |
| !! | ATCATTAACAAAATCACAAA+GGG | - | chr8.1:41997119-41997138 | None:intergenic | 20.0% |
| !! | ATGATAGATTTGATAAAGAA+TGG | + | chr8.1:41997134-41997153 | MS.gene064445:intron | 20.0% |
| !! | ATTAAGAACTAAGAAAATTG+GGG | + | chr8.1:41995974-41995993 | MS.gene064445:intron | 20.0% |
| !! | CGTGAAGTAATATAATATAT+TGG | + | chr8.1:41995862-41995881 | MS.gene064445:intron | 20.0% |
| !! | CTTTGATTAATCAATAATAG+TGG | + | chr8.1:41997937-41997956 | MS.gene064445:intron | 20.0% |
| !! | GACATATTAAAGACAAATAT+TGG | - | chr8.1:41997884-41997903 | None:intergenic | 20.0% |
| !! | TATCATTAACAAAATCACAA+AGG | - | chr8.1:41997120-41997139 | None:intergenic | 20.0% |
| !!! | AAAAAGCTTATATTAGTTTG+TGG | + | chr8.1:41996919-41996938 | MS.gene064445:intron | 20.0% |
| !!! | ACTTGTTTCCTTATTTAATT+AGG | - | chr8.1:41996539-41996558 | None:intergenic | 20.0% |
| !!! | ACTTTTGATTTCTTTATTTC+AGG | + | chr8.1:41996166-41996185 | MS.gene064445:intron | 20.0% |
| !!! | ATAACAACTTTTTGAATTGT+TGG | + | chr8.1:41998028-41998047 | MS.gene064445:intron | 20.0% |
| !!! | ATCTTTTGTAATATCATTCA+AGG | - | chr8.1:41996515-41996534 | None:intergenic | 20.0% |
| !!! | CCAATTTTAAACCTAATAAA+TGG | + | chr8.1:41996841-41996860 | MS.gene064445:CDS | 20.0% |
| !!! | CCATTTATTAGGTTTAAAAT+TGG | - | chr8.1:41996844-41996863 | None:intergenic | 20.0% |
| !!! | TCTATTTGTGTTATTAGTTA+TGG | + | chr8.1:41996683-41996702 | MS.gene064445:intron | 20.0% |
| ! | AAGTTGTTATATTATGCAAG+AGG | - | chr8.1:41998018-41998037 | None:intergenic | 25.0% |
| ! | ATAAAATTGTACACATGTTG+AGG | - | chr8.1:41997658-41997677 | None:intergenic | 25.0% |
| ! | ATACACAAAAACACATGAAA+TGG | + | chr8.1:41995945-41995964 | MS.gene064445:intron | 25.0% |
| ! | ATGGACATTTGCTTAATAAT+TGG | + | chr8.1:41995653-41995672 | MS.gene064445:intron | 25.0% |
| ! | GTCTTTAATATGTCATTGAA+TGG | + | chr8.1:41997890-41997909 | MS.gene064445:intron | 25.0% |
| ! | TCATTAACAAAATCACAAAG+GGG | - | chr8.1:41997118-41997137 | None:intergenic | 25.0% |
| ! | TCTCAACAAGATAATAACTT+AGG | + | chr8.1:41997060-41997079 | MS.gene064445:intron | 25.0% |
| ! | TGAAAATCAATTAACGTTGA+AGG | - | chr8.1:41995443-41995462 | None:intergenic | 25.0% |
| ! | TTCATTGTTACAACTATTGA+AGG | + | chr8.1:41997796-41997815 | MS.gene064445:intron | 25.0% |
| ! | TTGTGTATAAATCGTTCAAT+TGG | + | chr8.1:41995153-41995172 | MS.gene064445:intron | 25.0% |
| !! | AATGGTAATTTTTCTTTAGG+AGG | + | chr8.1:41996859-41996878 | MS.gene064445:intron | 25.0% |
| !! | GTTTTCATTTACAAATTTCC+AGG | - | chr8.1:41996743-41996762 | None:intergenic | 25.0% |
| !! | TGTCTGAAATTTGTAAAGTT+GGG | - | chr8.1:41998220-41998239 | None:intergenic | 25.0% |
| !! | TGTGCTGATGAATTTATATA+AGG | - | chr8.1:41994885-41994904 | None:intergenic | 25.0% |
| !! | TTGTCTGAAATTTGTAAAGT+TGG | - | chr8.1:41998221-41998240 | None:intergenic | 25.0% |
| !!! | ACCAATTTTAGAGTTTTGAA+TGG | + | chr8.1:41995788-41995807 | MS.gene064445:intron | 25.0% |
| !!! | CCAATTTTAGAGTTTTGAAT+GGG | + | chr8.1:41995789-41995808 | MS.gene064445:intron | 25.0% |
| !!! | CGTTTTAAAAATCACTTAAC+TGG | - | chr8.1:41997519-41997538 | None:intergenic | 25.0% |
| !!! | GTTAAGTGATTTTTAAAACG+TGG | + | chr8.1:41997519-41997538 | MS.gene064445:intron | 25.0% |
| !!! | TAAATTTTGTTTCATTTCCC+TGG | - | chr8.1:41997359-41997378 | None:intergenic | 25.0% |
| !!! | TTGTTATTAGGTTTTATACC+CGG | + | chr8.1:41995181-41995200 | MS.gene064445:intron | 25.0% |
| !!! | TTTTGAAATGATGAAAGACA+CGG | - | chr8.1:41995713-41995732 | None:intergenic | 25.0% |
| AAAACCAATTTGTAAGGTGA+GGG | + | chr8.1:41995267-41995286 | MS.gene064445:intron | 30.0% | |
| AACATGTGTTTGTGTATGAA+AGG | - | chr8.1:41995499-41995518 | None:intergenic | 30.0% | |
| AACTCAAGTTACACATTGAA+AGG | - | chr8.1:41995335-41995354 | None:intergenic | 30.0% | |
| ACCAAATAGCTGAAACATAA+AGG | - | chr8.1:41994918-41994937 | None:intergenic | 30.0% | |
| ACGATTTATACACAATAGCA+TGG | - | chr8.1:41995148-41995167 | None:intergenic | 30.0% | |
| AGATTGTGTTTGAATACGAA+AGG | - | chr8.1:41997334-41997353 | None:intergenic | 30.0% | |
| AGATTTATGTAGGGAATCAA+AGG | + | chr8.1:41996358-41996377 | MS.gene064445:CDS | 30.0% | |
| AGTAACATAAGTTGTTCCTT+TGG | - | chr8.1:41996591-41996610 | None:intergenic | 30.0% | |
| ATAATTATGCTCTTGAGTCT+TGG | - | chr8.1:41995578-41995597 | None:intergenic | 30.0% | |
| ATAGAAGTAGTCAAGAAAGT+TGG | - | chr8.1:41996668-41996687 | None:intergenic | 30.0% | |
| CCTTACAAAACCAATTTGTA+AGG | + | chr8.1:41995261-41995280 | MS.gene064445:intron | 30.0% | |
| GAAATATGGAACTAATCCAA+AGG | + | chr8.1:41996572-41996591 | MS.gene064445:intron | 30.0% | |
| GATTGTGTTTGAATACGAAA+GGG | - | chr8.1:41997333-41997352 | None:intergenic | 30.0% | |
| TAATTATGCTCTTGAGTCTT+GGG | - | chr8.1:41995577-41995596 | None:intergenic | 30.0% | |
| TCCATTTATACTACCAAGTT+GGG | + | chr8.1:41995889-41995908 | MS.gene064445:intron | 30.0% | |
| TCCTTTATGTTTCAGCTATT+TGG | + | chr8.1:41994914-41994933 | MS.gene064445:intron | 30.0% | |
| TTCAGATCCAGATTTATGTA+GGG | + | chr8.1:41996349-41996368 | MS.gene064445:CDS | 30.0% | |
| TTCCAAATAAAGCATATGGA+TGG | + | chr8.1:41998066-41998085 | MS.gene064445:CDS | 30.0% | |
| TTTCAGATCCAGATTTATGT+AGG | + | chr8.1:41996348-41996367 | MS.gene064445:CDS | 30.0% | |
| TTTGATTCCCTACATAAATC+TGG | - | chr8.1:41996359-41996378 | None:intergenic | 30.0% | |
| ! | AATGTGGTTTATCTGAAGTT+AGG | + | chr8.1:41996452-41996471 | MS.gene064445:intron | 30.0% |
| ! | ACTATGATTCCAGGATTTTT+CGG | - | chr8.1:41996314-41996333 | None:intergenic | 30.0% |
| ! | AGACTCAAGAGCATAATTAT+CGG | + | chr8.1:41995578-41995597 | MS.gene064445:intron | 30.0% |
| ! | CCTTTTCCAAATAAAGCATA+TGG | + | chr8.1:41998062-41998081 | MS.gene064445:CDS | 30.0% |
| ! | TGGGACATGTTATTTAAATG+TGG | + | chr8.1:41996436-41996455 | MS.gene064445:intron | 30.0% |
| ! | TTTTCTTTATGCTACACTTC+TGG | + | chr8.1:41997084-41997103 | MS.gene064445:intron | 30.0% |
| !! | AAATGAAAACAGCATTGACA+TGG | + | chr8.1:41996753-41996772 | MS.gene064445:CDS | 30.0% |
| !! | CATGTGTTTTTGTGTATGAA+AGG | - | chr8.1:41995942-41995961 | None:intergenic | 30.0% |
| !! | CCATATGCTTTATTTGGAAA+AGG | - | chr8.1:41998065-41998084 | None:intergenic | 30.0% |
| !! | CCCATTCAAAACTCTAAAAT+TGG | - | chr8.1:41995792-41995811 | None:intergenic | 30.0% |
| !!! | ATTTTTAAAACGTGGTGTCT+TGG | + | chr8.1:41997527-41997546 | MS.gene064445:intron | 30.0% |
| !!! | ATTTTTCTTTAGGAGGCATT+TGG | + | chr8.1:41996866-41996885 | MS.gene064445:intron | 30.0% |
| !!! | CCTTACAAATTGGTTTTGTA+AGG | - | chr8.1:41995264-41995283 | None:intergenic | 30.0% |
| AAACTTGAAGCTCTTGAAGT+TGG | + | chr8.1:41996416-41996435 | MS.gene064445:intron | 35.0% | |
| AAAGTTAATAGCGCATAGAG+TGG | - | chr8.1:41996151-41996170 | None:intergenic | 35.0% | |
| AACTTGAAGCTCTTGAAGTT+GGG | + | chr8.1:41996417-41996436 | MS.gene064445:intron | 35.0% | |
| AAGATAACTCGTTTCACAGA+TGG | - | chr8.1:41996254-41996273 | None:intergenic | 35.0% | |
| AGATTATGACTGATAGCAAG+AGG | - | chr8.1:41997860-41997879 | None:intergenic | 35.0% | |
| AGCTAGTGGAAGATATTGTT+TGG | + | chr8.1:41998142-41998161 | MS.gene064445:CDS | 35.0% | |
| ATTCAAACACAATCTCTCCA+GGG | + | chr8.1:41997339-41997358 | MS.gene064445:intron | 35.0% | |
| CAAAACCAATTTGTAAGGTG+AGG | + | chr8.1:41995266-41995285 | MS.gene064445:intron | 35.0% | |
| CATTCCTCATAAGAGAATGA+GGG | + | chr8.1:41997602-41997621 | MS.gene064445:intron | 35.0% | |
| CTGCAGTTGTATATGATACA+AGG | + | chr8.1:41996288-41996307 | MS.gene064445:CDS | 35.0% | |
| GATTATGACTGATAGCAAGA+GGG | - | chr8.1:41997859-41997878 | None:intergenic | 35.0% | |
| GGAACTTCAATTTGAAAGTG+TGG | - | chr8.1:41996130-41996149 | None:intergenic | 35.0% | |
| GGCATCACTCGAAAAATTAA+TGG | + | chr8.1:41997305-41997324 | MS.gene064445:intron | 35.0% | |
| GTCCATTTATACTACCAAGT+TGG | + | chr8.1:41995888-41995907 | MS.gene064445:intron | 35.0% | |
| TATTCAAACACAATCTCTCC+AGG | + | chr8.1:41997338-41997357 | MS.gene064445:intron | 35.0% | |
| TCAGAGTCTAAGAATAAGCT+AGG | - | chr8.1:41995207-41995226 | None:intergenic | 35.0% | |
| TCATTTACGACAAAACGAAC+AGG | - | chr8.1:41995111-41995130 | None:intergenic | 35.0% | |
| TCCAACATAACTTTGCTGAA+GGG | - | chr8.1:41997013-41997032 | None:intergenic | 35.0% | |
| TCCTTTGACTATGTTGTTGA+GGG | + | chr8.1:41995057-41995076 | MS.gene064445:CDS | 35.0% | |
| TGCACACCAATCATTCATAA+GGG | - | chr8.1:41994943-41994962 | None:intergenic | 35.0% | |
| TGGTTTCCCTTATGAATGAT+TGG | + | chr8.1:41994934-41994953 | MS.gene064445:intron | 35.0% | |
| TTCCAACATAACTTTGCTGA+AGG | - | chr8.1:41997014-41997033 | None:intergenic | 35.0% | |
| TTCCTTTGACTATGTTGTTG+AGG | + | chr8.1:41995056-41995075 | MS.gene064445:CDS | 35.0% | |
| TTCTCTTATGAGGAATGCTA+AGG | - | chr8.1:41997599-41997618 | None:intergenic | 35.0% | |
| TTGCACACCAATCATTCATA+AGG | - | chr8.1:41994944-41994963 | None:intergenic | 35.0% | |
| ! | ACCCAACTTGGTAGTATAAA+TGG | - | chr8.1:41995893-41995912 | None:intergenic | 35.0% |
| ! | AGAATTCGTCTTTTTCTGTC+AGG | + | chr8.1:41996080-41996099 | MS.gene064445:intron | 35.0% |
| ! | ATTTATACTACCAAGTTGGG+TGG | + | chr8.1:41995892-41995911 | MS.gene064445:intron | 35.0% |
| ! | CACCATCCATATGCTTTATT+TGG | - | chr8.1:41998071-41998090 | None:intergenic | 35.0% |
| ! | CTTTTTGAATTGTTGGATGC+AGG | + | chr8.1:41998035-41998054 | MS.gene064445:intron | 35.0% |
| ! | GGTAAAGTGATTTTCATACC+AGG | + | chr8.1:41995540-41995559 | MS.gene064445:intron | 35.0% |
| ! | TCAAGAGCATAATTATCGGT+GGG | + | chr8.1:41995582-41995601 | MS.gene064445:intron | 35.0% |
| ! | TGATTTTCATACCAGGTTAG+CGG | + | chr8.1:41995547-41995566 | MS.gene064445:intron | 35.0% |
| ! | TGCAATTAGTTTGAACCGTT+TGG | + | chr8.1:41997284-41997303 | MS.gene064445:intron | 35.0% |
| !! | CAATTGGTGTGCTTGTTATT+AGG | + | chr8.1:41995169-41995188 | MS.gene064445:intron | 35.0% |
| !! | GAATCATAGTTGATGAGACA+TGG | + | chr8.1:41996324-41996343 | MS.gene064445:CDS | 35.0% |
| !! | TGCAAATTTTAGTCCATGTG+TGG | + | chr8.1:41995611-41995630 | MS.gene064445:intron | 35.0% |
| !!! | AGAGTTTTGAATGGGTTGTA+TGG | + | chr8.1:41995797-41995816 | MS.gene064445:intron | 35.0% |
| !!! | ATTTTTCGAGTGATGCCAAA+CGG | - | chr8.1:41997302-41997321 | None:intergenic | 35.0% |
| AATAGCATGGAATGAACCTG+TGG | - | chr8.1:41995135-41995154 | None:intergenic | 40.0% | |
| AATCATCCTCGAGCAATTGA+AGG | + | chr8.1:41997260-41997279 | MS.gene064445:intron | 40.0% | |
| AATTTGTAAGGTGAGGGTGA+GGG | + | chr8.1:41995273-41995292 | MS.gene064445:intron | 40.0% | |
| ACCCTCAACAACATAGTCAA+AGG | - | chr8.1:41995061-41995080 | None:intergenic | 40.0% | |
| AGCAAGTGGTCAACCTTATT+AGG | - | chr8.1:41994976-41994995 | None:intergenic | 40.0% | |
| AGTCTAAGAATAAGCTAGGC+CGG | - | chr8.1:41995203-41995222 | None:intergenic | 40.0% | |
| AGTCTCATACGCCAGAATAT+GGG | - | chr8.1:41998117-41998136 | None:intergenic | 40.0% | |
| ATACTCTTGTAGTCTCAGTC+AGG | - | chr8.1:41997703-41997722 | None:intergenic | 40.0% | |
| ATAGCATGGAATGAACCTGT+GGG | - | chr8.1:41995134-41995153 | None:intergenic | 40.0% | |
| ATATTGTTTGGCTGAGAGAG+TGG | + | chr8.1:41998154-41998173 | MS.gene064445:CDS | 40.0% | |
| CACCATCAAGTTTAAGCAAG+TGG | - | chr8.1:41994990-41995009 | None:intergenic | 40.0% | |
| CGAATTCTCACAGAAATAGC+TGG | - | chr8.1:41996068-41996087 | None:intergenic | 40.0% | |
| CTCTTACAACCAGAGCTTAA+CGG | + | chr8.1:41996808-41996827 | MS.gene064445:CDS | 40.0% | |
| GACCACTTGCTTAAACTTGA+TGG | + | chr8.1:41994985-41995004 | MS.gene064445:CDS | 40.0% | |
| GCAAGCAGGTAATCCTAATA+AGG | + | chr8.1:41994960-41994979 | MS.gene064445:intron | 40.0% | |
| GCATTCCTCATAAGAGAATG+AGG | + | chr8.1:41997601-41997620 | MS.gene064445:intron | 40.0% | |
| GGTACGAAGAAGTTCATTGA+CGG | + | chr8.1:41997412-41997431 | MS.gene064445:intron | 40.0% | |
| GTACACACTTTCGAAGACTT+TGG | + | chr8.1:41996705-41996724 | MS.gene064445:CDS | 40.0% | |
| GTCTCATCAACTATGATTCC+AGG | - | chr8.1:41996323-41996342 | None:intergenic | 40.0% | |
| TATGCCCTCATTCTCTTATG+AGG | - | chr8.1:41997609-41997628 | None:intergenic | 40.0% | |
| TATGTTGTTGAGGGTTGTGA+CGG | + | chr8.1:41995066-41995085 | MS.gene064445:CDS | 40.0% | |
| TGCTATTAACCCAACAATGG+TGG | + | chr8.1:41996777-41996796 | MS.gene064445:CDS | 40.0% | |
| TTAAGCAGACACAGATGAAC+TGG | - | chr8.1:41996012-41996031 | None:intergenic | 40.0% | |
| ! | CTCAAGAGCATAATTATCGG+TGG | + | chr8.1:41995581-41995600 | MS.gene064445:intron | 40.0% |
| ! | GGTTGCTATTAACCCAACAA+TGG | + | chr8.1:41996774-41996793 | MS.gene064445:CDS | 40.0% |
| ! | TTAAGCTCTGGTTGTAAGAG+AGG | - | chr8.1:41996808-41996827 | None:intergenic | 40.0% |
| ! | TTTTGTCGTAAATGACCCAC+AGG | + | chr8.1:41995116-41995135 | MS.gene064445:CDS | 40.0% |
| !! | AGGAGAAAGAAGCACTAACT+TGG | - | chr8.1:41994865-41994884 | None:intergenic | 40.0% |
| !! | GAAACTCAAAGAGGTGTTGA+TGG | + | chr8.1:41997382-41997401 | MS.gene064445:intron | 40.0% |
| !! | GCTTAAACTTGATGGTGCAA+AGG | + | chr8.1:41994993-41995012 | MS.gene064445:CDS | 40.0% |
| !! | GGAGAAAGAAGCACTAACTT+GGG | - | chr8.1:41994864-41994883 | None:intergenic | 40.0% |
| !! | TTGGTAGCTTTTCTTGACCA+CGG | + | chr8.1:41995672-41995691 | MS.gene064445:intron | 40.0% |
| !!! | CTGCTGGTTTTATTGCTTCA+TGG | + | chr8.1:41994785-41994804 | MS.gene064445:CDS | 40.0% |
| AAAGACACGGTTGCTGAAGT+TGG | - | chr8.1:41995700-41995719 | None:intergenic | 45.0% | |
| AACGAACAGGTGAAGCAGTA+TGG | - | chr8.1:41995098-41995117 | None:intergenic | 45.0% | |
| AAGAAGTTCATTGACGGTGG+GGG | + | chr8.1:41997418-41997437 | MS.gene064445:intron | 45.0% | |
| AAGTTGGGTGGCATGAATGT+GGG | + | chr8.1:41995904-41995923 | MS.gene064445:intron | 45.0% | |
| ACGAAGAAGTTCATTGACGG+TGG | + | chr8.1:41997415-41997434 | MS.gene064445:intron | 45.0% | |
| ACTTTCGAAGACTTTGGCTG+AGG | + | chr8.1:41996711-41996730 | MS.gene064445:CDS | 45.0% | |
| AGAGCATAATTATCGGTGGG+TGG | + | chr8.1:41995585-41995604 | MS.gene064445:intron | 45.0% | |
| ATTAACCCAACAATGGTGGC+AGG | + | chr8.1:41996781-41996800 | MS.gene064445:CDS | 45.0% | |
| CAATTTGTAAGGTGAGGGTG+AGG | + | chr8.1:41995272-41995291 | MS.gene064445:intron | 45.0% | |
| CAGTCTCATACGCCAGAATA+TGG | - | chr8.1:41998118-41998137 | None:intergenic | 45.0% | |
| CGAAGAAGTTCATTGACGGT+GGG | + | chr8.1:41997416-41997435 | MS.gene064445:intron | 45.0% | |
| CTCACCCTCACCTTACAAAT+TGG | - | chr8.1:41995274-41995293 | None:intergenic | 45.0% | |
| GAAGAAGTTCATTGACGGTG+GGG | + | chr8.1:41997417-41997436 | MS.gene064445:intron | 45.0% | |
| GATACAAGGCCGAAAAATCC+TGG | + | chr8.1:41996302-41996321 | MS.gene064445:CDS | 45.0% | |
| GCAAGAGGACAATTCTTGTC+TGG | - | chr8.1:41998003-41998022 | None:intergenic | 45.0% | |
| GCCCTTCAGCAAAGTTATGT+TGG | + | chr8.1:41997009-41997028 | MS.gene064445:intron | 45.0% | |
| GGAGAGGTTGCAACTCTTTA+AGG | + | chr8.1:41995014-41995033 | MS.gene064445:CDS | 45.0% | |
| GTCTAAGAATAAGCTAGGCC+GGG | - | chr8.1:41995202-41995221 | None:intergenic | 45.0% | |
| GTTAAGTTTCTCCTCCAACG+TGG | + | chr8.1:41994811-41994830 | MS.gene064445:CDS | 45.0% | |
| TATGAGACTGCTTCAGCTAG+TGG | + | chr8.1:41998128-41998147 | MS.gene064445:CDS | 45.0% | |
| TCAACACTTCCGTTAAGCTC+TGG | - | chr8.1:41996820-41996839 | None:intergenic | 45.0% | |
| TGAATGATTGGTGTGCAAGC+AGG | + | chr8.1:41994946-41994965 | MS.gene064445:intron | 45.0% | |
| TGTCTTGGACCAATGGTTGA+GGG | + | chr8.1:41997542-41997561 | MS.gene064445:intron | 45.0% | |
| TGTTGCTAACGCCCATATTC+TGG | + | chr8.1:41998103-41998122 | MS.gene064445:CDS | 45.0% | |
| TTAAGAGTTCCCTTCAGTGC+CGG | - | chr8.1:41996206-41996225 | None:intergenic | 45.0% | |
| TTGAACACTCCCTCAACCAT+TGG | - | chr8.1:41997554-41997573 | None:intergenic | 45.0% | |
| TTGCAACCTTCAATTGCTCG+AGG | - | chr8.1:41997269-41997288 | None:intergenic | 45.0% | |
| ! | CTTTGCTGAAGGGCATGTTA+AGG | - | chr8.1:41997003-41997022 | None:intergenic | 45.0% |
| ! | GAGGTTGCAACTCTTTAAGG+CGG | + | chr8.1:41995017-41995036 | MS.gene064445:CDS | 45.0% |
| ! | TTGATTGATCCGGCACTGAA+GGG | + | chr8.1:41996194-41996213 | MS.gene064445:CDS | 45.0% |
| !! | AACTTGATGGTGCAAAGGAG+AGG | + | chr8.1:41994998-41995017 | MS.gene064445:CDS | 45.0% |
| !! | ACTCAAAGAGGTGTTGATGG+TGG | + | chr8.1:41997385-41997404 | MS.gene064445:intron | 45.0% |
| !! | ACTCTTTAAGGCGGATCTCT+TGG | + | chr8.1:41995026-41995045 | MS.gene064445:CDS | 45.0% |
| !! | ATGGTTGAGGGAGTGTTCAA+AGG | + | chr8.1:41997554-41997573 | MS.gene064445:intron | 45.0% |
| !! | CTCAAAGAGGTGTTGATGGT+GGG | + | chr8.1:41997386-41997405 | MS.gene064445:intron | 45.0% |
| !! | TCAGGCTGAGTTGATTGATC+CGG | + | chr8.1:41996184-41996203 | MS.gene064445:intron | 45.0% |
| AACGTGGTGTCTTGGACCAA+TGG | + | chr8.1:41997535-41997554 | MS.gene064445:intron | 50.0% | |
| AAGGCGGATCTCTTGGAAGA+AGG | + | chr8.1:41995033-41995052 | MS.gene064445:CDS | 50.0% | |
| AGAAGTTCATTGACGGTGGG+GGG | + | chr8.1:41997419-41997438 | MS.gene064445:intron | 50.0% | |
| AGTTGGGTGGCATGAATGTG+GGG | + | chr8.1:41995905-41995924 | MS.gene064445:intron | 50.0% | |
| CACATTCATGCCACCCAACT+TGG | - | chr8.1:41995905-41995924 | None:intergenic | 50.0% | |
| CTAACTTGGGTCACGAACAG+TGG | - | chr8.1:41994851-41994870 | None:intergenic | 50.0% | |
| CTCTGACAGTGTAACCACGT+TGG | - | chr8.1:41994828-41994847 | None:intergenic | 50.0% | |
| GGAAAAGTGGTGTGTGTGAC+AGG | + | chr8.1:41994760-41994779 | MS.gene064445:CDS | 50.0% | |
| GTGTCTTGGACCAATGGTTG+AGG | + | chr8.1:41997541-41997560 | MS.gene064445:intron | 50.0% | |
| TAGTCTCAGTCAGGCATGAC+AGG | - | chr8.1:41997694-41997713 | None:intergenic | 50.0% | |
| TGACAGTGTAACCACGTTGG+AGG | - | chr8.1:41994825-41994844 | None:intergenic | 50.0% | |
| ! | CAAGTTGGGTGGCATGAATG+TGG | + | chr8.1:41995903-41995922 | MS.gene064445:intron | 50.0% |
| ! | GTTGATTGATCCGGCACTGA+AGG | + | chr8.1:41996193-41996212 | MS.gene064445:CDS | 50.0% |
| !! | AAGAGGTGTTGATGGTGGGT+TGG | + | chr8.1:41997390-41997409 | MS.gene064445:intron | 50.0% |
| !! | AGAGGTGTTGATGGTGGGTT+GGG | + | chr8.1:41997391-41997410 | MS.gene064445:intron | 50.0% |
| AGAGGTCCTGCCACCATTGT+TGG | - | chr8.1:41996790-41996809 | None:intergenic | 55.0% | |
| CAACTGCTGTCAGAGAGGGA+TGG | + | chr8.1:41995634-41995653 | MS.gene064445:intron | 55.0% | |
| CTGACAGCAGTTGCCACACA+TGG | - | chr8.1:41995627-41995646 | None:intergenic | 55.0% | |
| GAAGTTCATTGACGGTGGGG+GGG | + | chr8.1:41997420-41997439 | MS.gene064445:intron | 55.0% | |
| GAGGTCCTGCCACCATTGTT+GGG | - | chr8.1:41996789-41996808 | None:intergenic | 55.0% | |
| GGTTGCTGAAGTTGGAACCG+TGG | - | chr8.1:41995692-41995711 | None:intergenic | 55.0% | |
| GTGGCAACTGCTGTCAGAGA+GGG | + | chr8.1:41995630-41995649 | MS.gene064445:intron | 55.0% | |
| TCTTGGGATCTCCGCTAACC+TGG | - | chr8.1:41995561-41995580 | None:intergenic | 55.0% | |
| TGTGGCAACTGCTGTCAGAG+AGG | + | chr8.1:41995629-41995648 | MS.gene064445:intron | 55.0% | |
| TTCATTGACGGTGGGGGGGT+GGG | + | chr8.1:41997424-41997443 | MS.gene064445:intron | 60.0% | |
| ! | GTGTGTGTGACAGGTGCTGC+TGG | + | chr8.1:41994769-41994788 | MS.gene064445:CDS | 60.0% |
| CTTTGGCTGAGGCTGCTGCC+TGG | + | chr8.1:41996722-41996741 | MS.gene064445:CDS | 65.0% | |
| GTTCATTGACGGTGGGGGGG+TGG | + | chr8.1:41997423-41997442 | MS.gene064445:intron | 65.0% | |
| ATTGACGGTGGGGGGGTGGG+TGG | + | chr8.1:41997427-41997446 | MS.gene064445:intron | 70.0% | |
| CGGTGGGGGGGTGGGTGGAA+AGG | + | chr8.1:41997432-41997451 | MS.gene064445:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 41994748 | 41998240 | 41994748 | ID=MS.gene064445 |
| chr8.1 | mRNA | 41994748 | 41998240 | 41994748 | ID=MS.gene064445.t1;Parent=MS.gene064445 |
| chr8.1 | exon | 41994748 | 41994865 | 41994748 | ID=MS.gene064445.t1.exon1;Parent=MS.gene064445.t1 |
| chr8.1 | CDS | 41994748 | 41994865 | 41994748 | ID=cds.MS.gene064445.t1;Parent=MS.gene064445.t1 |
| chr8.1 | exon | 41994968 | 41995137 | 41994968 | ID=MS.gene064445.t1.exon2;Parent=MS.gene064445.t1 |
| chr8.1 | CDS | 41994968 | 41995137 | 41994968 | ID=cds.MS.gene064445.t1;Parent=MS.gene064445.t1 |
| chr8.1 | exon | 41996188 | 41996379 | 41996188 | ID=MS.gene064445.t1.exon3;Parent=MS.gene064445.t1 |
| chr8.1 | CDS | 41996188 | 41996379 | 41996188 | ID=cds.MS.gene064445.t1;Parent=MS.gene064445.t1 |
| chr8.1 | exon | 41996700 | 41996862 | 41996700 | ID=MS.gene064445.t1.exon4;Parent=MS.gene064445.t1 |
| chr8.1 | CDS | 41996700 | 41996862 | 41996700 | ID=cds.MS.gene064445.t1;Parent=MS.gene064445.t1 |
| chr8.1 | exon | 41998057 | 41998240 | 41998057 | ID=MS.gene064445.t1.exon5;Parent=MS.gene064445.t1 |
| chr8.1 | CDS | 41998057 | 41998240 | 41998057 | ID=cds.MS.gene064445.t1;Parent=MS.gene064445.t1 |
| Gene Sequence |
| Protein sequence |
