Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064959.t1 | AFK44120.1 | 95.8 | 216 | 9 | 0 | 27 | 242 | 32 | 247 | 2.90E-90 | 341.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064959.t1 | Q9LIQ6 | 70.8 | 216 | 50 | 2 | 27 | 242 | 32 | 234 | 3.0e-64 | 246.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064959.t1 | B7FI89 | 97.2 | 216 | 6 | 0 | 27 | 242 | 32 | 247 | 2.1e-90 | 341.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052954 | MS.gene064959 | 0.808268 | 3.37E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene064959 | 0.828983 | 6.64E-55 | -1.69E-46 |
| MS.gene059830 | MS.gene064959 | 0.808958 | 2.40E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064959.t1 | MTR_1g046460 | 97.222 | 216 | 6 | 0 | 27 | 242 | 32 | 247 | 2.18e-159 | 441 |
| MS.gene064959.t1 | MTR_7g085450 | 35.326 | 184 | 107 | 4 | 57 | 232 | 77 | 256 | 3.24e-31 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064959.t1 | AT3G24010 | 66.204 | 216 | 60 | 4 | 27 | 242 | 32 | 234 | 7.48e-90 | 265 |
| MS.gene064959.t1 | AT1G54390 | 37.870 | 169 | 95 | 5 | 71 | 232 | 9 | 174 | 9.70e-32 | 115 |
| MS.gene064959.t1 | AT1G54390 | 37.870 | 169 | 95 | 5 | 71 | 232 | 70 | 235 | 4.00e-31 | 115 |
| MS.gene064959.t1 | AT1G54390 | 37.870 | 169 | 95 | 5 | 71 | 232 | 70 | 235 | 4.00e-31 | 115 |
| MS.gene064959.t1 | AT1G54390 | 37.870 | 169 | 95 | 5 | 71 | 232 | 70 | 235 | 4.00e-31 | 115 |
| MS.gene064959.t1 | AT1G54390 | 37.870 | 169 | 95 | 5 | 71 | 232 | 90 | 255 | 5.01e-31 | 115 |
| MS.gene064959.t1 | AT1G54390 | 37.870 | 169 | 95 | 5 | 71 | 232 | 90 | 255 | 5.01e-31 | 115 |
Find 57 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATAGAGTGGTTTCATTT+TGG | 0.253291 | 1.4:-31065721 | MS.gene064959:CDS |
| TACTTCTTATGAAGAATATT+AGG | 0.324596 | 1.4:+31069868 | None:intergenic |
| AAGCAGTATGTGGGTTCATT+TGG | 0.325444 | 1.4:+31065887 | None:intergenic |
| CCTGATGGAAATACAAAATC+TGG | 0.330861 | 1.4:-31067799 | MS.gene064959:CDS |
| AAGAACAACCAAAAGGAAAA+TGG | 0.346656 | 1.4:-31065684 | MS.gene064959:CDS |
| CTGCCGCTGCTGTTGCAGTT+TGG | 0.346888 | 1.4:+31065981 | None:intergenic |
| CCATTTCTCCATAGCTAACT+TGG | 0.349587 | 1.4:+31065858 | None:intergenic |
| GGCTGTCCAGGCATACGATT+TGG | 0.377614 | 1.4:-31068611 | MS.gene064959:intron |
| GCCAGCCTCATTTGCCTCTC+CGG | 0.403443 | 1.4:+31065629 | None:intergenic |
| GTGGGTTCATTTGGATCAAC+GGG | 0.405667 | 1.4:+31065896 | None:intergenic |
| AGAGAAAATGCTGCAATAAC+GGG | 0.418026 | 1.4:-31067838 | MS.gene064959:CDS |
| AGCAAGAAATTGAAGATATT+AGG | 0.418785 | 1.4:-31068747 | MS.gene064959:CDS |
| CCAAGTTAGCTATGGAGAAA+TGG | 0.433955 | 1.4:-31065858 | MS.gene064959:CDS |
| CTTACCTCAATGTTGTAAAG+AGG | 0.452569 | 1.4:+31070277 | None:intergenic |
| AAGAGAAAATGCTGCAATAA+CGG | 0.462989 | 1.4:-31067839 | MS.gene064959:CDS |
| GCCAGTAGGGTTTGCAGATG+TGG | 0.471309 | 1.4:+31065934 | None:intergenic |
| AAAAGTCGCCTTGGCTGTCC+AGG | 0.479796 | 1.4:-31068623 | MS.gene064959:CDS |
| TTGGTTGCAAAAGCAGTATG+TGG | 0.499256 | 1.4:+31065877 | None:intergenic |
| AATCTAATAGCTGAGGTATC+CGG | 0.503643 | 1.4:+31068697 | None:intergenic |
| TCTGGAAAGGAAGGCGGTAG+AGG | 0.505564 | 1.4:-31067781 | MS.gene064959:CDS |
| ATGAACAAAAGCATAGCATC+AGG | 0.508393 | 1.4:-31068657 | MS.gene064959:CDS |
| AAAAGTTTGATGAGGAGCTT+CGG | 0.508683 | 1.4:-31068012 | MS.gene064959:CDS |
| GCCACATCTGCAAACCCTAC+TGG | 0.508937 | 1.4:-31065935 | MS.gene064959:CDS |
| TGATTACCAAATCGTATGCC+TGG | 0.512770 | 1.4:+31068605 | None:intergenic |
| AACTGCAACAGCAGCGGCAG+TGG | 0.517916 | 1.4:-31065978 | MS.gene064959:CDS |
| ATTAGGCGAGGAGTTCGATC+TGG | 0.518526 | 1.4:-31068730 | MS.gene064959:CDS |
| CAGTTTGGACAGATGCTGCT+TGG | 0.529704 | 1.4:+31065996 | None:intergenic |
| TTTCCATCAGGACTTGAAGT+AGG | 0.540325 | 1.4:+31067811 | None:intergenic |
| ATCTGCAAACCCTACTGGCA+TGG | 0.540608 | 1.4:-31065930 | MS.gene064959:CDS |
| TGTGGGTTCATTTGGATCAA+CGG | 0.548467 | 1.4:+31065895 | None:intergenic |
| TGCACCTCTTTACAACATTG+AGG | 0.558261 | 1.4:-31070281 | MS.gene064959:intron |
| TGGAAATACAAAATCTGGAA+AGG | 0.560041 | 1.4:-31067794 | MS.gene064959:CDS |
| GCGCCTACTTCAAGTCCTGA+TGG | 0.561524 | 1.4:-31067814 | MS.gene064959:CDS |
| AATACAAAATCTGGAAAGGA+AGG | 0.564186 | 1.4:-31067790 | MS.gene064959:CDS |
| CATTTCAGTGCAAAATAGAG+TGG | 0.564301 | 1.4:-31065732 | MS.gene064959:intron |
| AAATCTAAATCCATGCCAGT+AGG | 0.571887 | 1.4:+31065920 | None:intergenic |
| GGAAAGGAAGGCGGTAGAGG+AGG | 0.572709 | 1.4:-31067778 | MS.gene064959:CDS |
| GGCTTGAAAGAACAACCAAA+AGG | 0.577624 | 1.4:-31065691 | MS.gene064959:CDS |
| CTGTATGACCAGATAATCAA+AGG | 0.577866 | 1.4:-31068789 | MS.gene064959:intron |
| AATCGCCGGAGAGGCAAATG+AGG | 0.587113 | 1.4:-31065634 | None:intergenic |
| ACGACGCGGTTCTCTACCAC+CGG | 0.609995 | 1.4:+31070303 | None:intergenic |
| TCGATCTGGAAACATCATAC+CGG | 0.617477 | 1.4:-31068716 | MS.gene064959:CDS |
| TGGTTGCAAAAGCAGTATGT+GGG | 0.617588 | 1.4:+31065878 | None:intergenic |
| AATCTAAATCCATGCCAGTA+GGG | 0.619977 | 1.4:+31065921 | None:intergenic |
| ATCGTATGCCTGGACAGCCA+AGG | 0.620003 | 1.4:+31068615 | None:intergenic |
| ATCAGAGAATCTAATAGCTG+AGG | 0.624258 | 1.4:+31068690 | None:intergenic |
| GTGCCGCAACAAGAAATCGC+CGG | 0.626979 | 1.4:-31065648 | MS.gene064959:CDS |
| ACATACATCAGGGTTATCAC+AGG | 0.628537 | 1.4:+31065832 | None:intergenic |
| GAAATTGAAGATATTAGGCG+AGG | 0.633046 | 1.4:-31068742 | MS.gene064959:CDS |
| GCAACAAGAAATCGCCGGAG+AGG | 0.647160 | 1.4:-31065643 | MS.gene064959:CDS |
| TCTCCGGCGATTTCTTGTTG+CGG | 0.647908 | 1.4:+31065645 | None:intergenic |
| TGTCCAAACTGCAACAGCAG+CGG | 0.650946 | 1.4:-31065984 | MS.gene064959:CDS |
| TTGTAAAGAGGTGCACGACG+CGG | 0.664606 | 1.4:+31070289 | None:intergenic |
| ACAAAATCTGGAAAGGAAGG+CGG | 0.676560 | 1.4:-31067787 | MS.gene064959:CDS |
| TTTGATGAGGAGCTTCGGCG+TGG | 0.684897 | 1.4:-31068007 | MS.gene064959:intron |
| ATTAGTGACATTATGCACAC+CGG | 0.688818 | 1.4:-31070322 | None:intergenic |
| AGTGACATTATGCACACCGG+TGG | 0.706105 | 1.4:-31070319 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATATTGTATAAAATTAT+AGG | - | chr1.4:31066511-31066530 | MS.gene064959:intron | 10.0% |
| !! | AAATATAACTCAAAAAGAAA+AGG | + | chr1.4:31069736-31069755 | None:intergenic | 15.0% |
| !! | AAATGAAAATACGATAAAAA+AGG | + | chr1.4:31065810-31065829 | None:intergenic | 15.0% |
| !! | AATAACCAAAATAATCATTT+AGG | - | chr1.4:31069126-31069145 | MS.gene064959:intron | 15.0% |
| !! | AATATAACTCAAAAAGAAAA+GGG | + | chr1.4:31069735-31069754 | None:intergenic | 15.0% |
| !! | TTATAATAAGATTTGATTCA+TGG | - | chr1.4:31066731-31066750 | MS.gene064959:intron | 15.0% |
| !!! | CAAAAATTTCGATTTTTTTA+GGG | - | chr1.4:31065974-31065993 | MS.gene064959:CDS | 15.0% |
| !!! | TAATTCCTAAATGATTATTT+TGG | + | chr1.4:31069134-31069153 | None:intergenic | 15.0% |
| !! | AAAGTCAATATTTGTAATGA+TGG | - | chr1.4:31066465-31066484 | MS.gene064959:intron | 20.0% |
| !! | AAATACGATAAAAAAGGAAA+AGG | + | chr1.4:31065804-31065823 | None:intergenic | 20.0% |
| !! | AAATTGAAATTGAGAAAAGA+AGG | + | chr1.4:31065938-31065957 | None:intergenic | 20.0% |
| !! | AAGTTGAATCATATTGTAAT+CGG | - | chr1.4:31068023-31068042 | MS.gene064959:CDS | 20.0% |
| !! | AATAAAAATTGAAAAGTTCC+AGG | - | chr1.4:31068397-31068416 | MS.gene064959:intron | 20.0% |
| !! | AATAACATTAATCAACATGT+AGG | - | chr1.4:31068505-31068524 | MS.gene064959:intron | 20.0% |
| !! | ATAACATTAATCAACATGTA+GGG | - | chr1.4:31068506-31068525 | MS.gene064959:intron | 20.0% |
| !! | ATAGATATTCGAAAAGTTTA+AGG | - | chr1.4:31065714-31065733 | MS.gene064959:CDS | 20.0% |
| !! | ATATAACTCAAAAAGAAAAG+GGG | + | chr1.4:31069734-31069753 | None:intergenic | 20.0% |
| !! | CTATTCTATCAATAATATTC+AGG | + | chr1.4:31069026-31069045 | None:intergenic | 20.0% |
| !! | TACTTCTTATGAAGAATATT+AGG | + | chr1.4:31066081-31066100 | None:intergenic | 20.0% |
| !! | TAGATATTCGAAAAGTTTAA+GGG | - | chr1.4:31065715-31065734 | MS.gene064959:CDS | 20.0% |
| !! | TATACTCATGTTAATATACT+TGG | - | chr1.4:31067681-31067700 | MS.gene064959:intron | 20.0% |
| !! | TCATCTAATTGGAATAATTT+GGG | + | chr1.4:31069446-31069465 | None:intergenic | 20.0% |
| !! | TTAAATACATGTAACAAGAT+AGG | + | chr1.4:31067368-31067387 | None:intergenic | 20.0% |
| !! | TTCGAATATCTATTTATTGA+CGG | + | chr1.4:31065707-31065726 | None:intergenic | 20.0% |
| !!! | AAAAAGTACGTAATACATTT+TGG | - | chr1.4:31068195-31068214 | MS.gene064959:intron | 20.0% |
| !!! | ATGTTTCATTATTTTATTGC+AGG | - | chr1.4:31067875-31067894 | MS.gene064959:intron | 20.0% |
| !!! | ATTTAGTCATTTAGTGATTT+TGG | - | chr1.4:31066542-31066561 | MS.gene064959:intron | 20.0% |
| !!! | CCAAAAATTTCGATTTTTTT+AGG | - | chr1.4:31065973-31065992 | MS.gene064959:CDS | 20.0% |
| !!! | CCTAAAAAAATCGAAATTTT+TGG | + | chr1.4:31065976-31065995 | None:intergenic | 20.0% |
| !!! | TACTTTGCTATATTAAATGA+AGG | - | chr1.4:31067021-31067040 | MS.gene064959:intron | 20.0% |
| !!! | TATTTTCTTATACGAACTAA+AGG | + | chr1.4:31066349-31066368 | None:intergenic | 20.0% |
| ! | AAAAAAGGAAAAGGTTACTA+TGG | + | chr1.4:31065795-31065814 | None:intergenic | 25.0% |
| ! | AACAAGATTAACTAGACATT+AGG | - | chr1.4:31068371-31068390 | MS.gene064959:intron | 25.0% |
| ! | ACAGATTTGTGACAAAAAAT+TGG | + | chr1.4:31067712-31067731 | None:intergenic | 25.0% |
| ! | AGAAATCAACTATAATGCTA+TGG | - | chr1.4:31068604-31068623 | MS.gene064959:intron | 25.0% |
| ! | AGCAAGAAATTGAAGATATT+AGG | - | chr1.4:31067199-31067218 | MS.gene064959:intron | 25.0% |
| ! | ATAAGATTTGATTCATGGTT+TGG | - | chr1.4:31066736-31066755 | MS.gene064959:intron | 25.0% |
| ! | ATATCTGAAAAAGTTTGATG+AGG | - | chr1.4:31067926-31067945 | MS.gene064959:intron | 25.0% |
| ! | ATTACATATCCTCATCTAAT+TGG | + | chr1.4:31069457-31069476 | None:intergenic | 25.0% |
| ! | ATTTACGTCACATAATAAAC+TGG | - | chr1.4:31066868-31066887 | MS.gene064959:intron | 25.0% |
| ! | CAAATTATTCCAATTAGATG+AGG | - | chr1.4:31069445-31069464 | MS.gene064959:intron | 25.0% |
| ! | CACATAACATTATTGACATA+TGG | + | chr1.4:31068806-31068825 | None:intergenic | 25.0% |
| ! | CTCATCTAATTGGAATAATT+TGG | + | chr1.4:31069447-31069466 | None:intergenic | 25.0% |
| ! | GTACATATTTCAGATTGTTA+TGG | + | chr1.4:31068579-31068598 | None:intergenic | 25.0% |
| ! | TAACATTAATCAACATGTAG+GGG | - | chr1.4:31068507-31068526 | MS.gene064959:intron | 25.0% |
| ! | TAAGAAACTTATGTATTCTG+TGG | + | chr1.4:31069194-31069213 | None:intergenic | 25.0% |
| ! | TACTAAATAGTACTATTGTG+TGG | - | chr1.4:31067603-31067622 | MS.gene064959:intron | 25.0% |
| ! | TATAACTCAAAAAGAAAAGG+GGG | + | chr1.4:31069733-31069752 | None:intergenic | 25.0% |
| ! | TATGTTCATCAACCAAATTT+AGG | + | chr1.4:31067632-31067651 | None:intergenic | 25.0% |
| ! | TCAAAATATGTATGGAATGT+AGG | + | chr1.4:31070183-31070202 | None:intergenic | 25.0% |
| ! | TCACATTATAAATACAAGTG+AGG | - | chr1.4:31067773-31067792 | MS.gene064959:CDS | 25.0% |
| ! | TTACTATGGTACAATAGTAT+AGG | + | chr1.4:31065781-31065800 | None:intergenic | 25.0% |
| ! | TTCAAACTAATGAATTACGA+TGG | - | chr1.4:31065751-31065770 | MS.gene064959:intron | 25.0% |
| ! | TTGTTACATGTATTTAACCA+AGG | - | chr1.4:31067371-31067390 | MS.gene064959:intron | 25.0% |
| ! | TTTGGTATTTAAGAGACTAA+TGG | - | chr1.4:31068988-31069007 | MS.gene064959:intron | 25.0% |
| !! | AAAATAGAGTGGTTTCATTT+TGG | - | chr1.4:31070225-31070244 | MS.gene064959:intron | 25.0% |
| !! | AACAATCTGAAATATGTACA+AGG | - | chr1.4:31068580-31068599 | MS.gene064959:intron | 25.0% |
| !! | CAATATTTGTAATGATGGAA+CGG | - | chr1.4:31066470-31066489 | MS.gene064959:intron | 25.0% |
| !! | CAATGATTTTCATTACACTA+AGG | - | chr1.4:31067462-31067481 | MS.gene064959:intron | 25.0% |
| !! | GTGAAATGAACTTTAATTTC+AGG | - | chr1.4:31066980-31066999 | MS.gene064959:intron | 25.0% |
| !! | TACCTTGTAAACTTTTATCT+AGG | + | chr1.4:31066119-31066138 | None:intergenic | 25.0% |
| !!! | ATCAAAACATGTCATTTTTG+TGG | - | chr1.4:31066422-31066441 | MS.gene064959:intron | 25.0% |
| !!! | CAAAAATGACATGTTTTGAT+TGG | + | chr1.4:31066422-31066441 | None:intergenic | 25.0% |
| !!! | CATGTATTTTTTTACACTGT+CGG | - | chr1.4:31066200-31066219 | MS.gene064959:intron | 25.0% |
| !!! | CGGTTTAAAATAGTTTTACA+CGG | - | chr1.4:31066220-31066239 | MS.gene064959:intron | 25.0% |
| !!! | GGTTTAAAATAGTTTTACAC+GGG | - | chr1.4:31066221-31066240 | MS.gene064959:intron | 25.0% |
| !!! | TCTGTATTTCTAGATAGAAA+AGG | - | chr1.4:31068427-31068446 | MS.gene064959:intron | 25.0% |
| AAAATAACCATACTAGAGTG+GGG | - | chr1.4:31066282-31066301 | MS.gene064959:intron | 30.0% | |
| AAGAACAACCAAAAGGAAAA+TGG | - | chr1.4:31070262-31070281 | MS.gene064959:intron | 30.0% | |
| AAGAGAAAATGCTGCAATAA+CGG | - | chr1.4:31068107-31068126 | MS.gene064959:intron | 30.0% | |
| AAGCATGACGTATAAAACAA+TGG | + | chr1.4:31066254-31066273 | None:intergenic | 30.0% | |
| AAGGAATGGGGAATAATTTA+AGG | + | chr1.4:31068758-31068777 | None:intergenic | 30.0% | |
| AATAACATTCGCAAATTGAG+TGG | + | chr1.4:31067988-31068007 | None:intergenic | 30.0% | |
| AATACAAAATCTGGAAAGGA+AGG | - | chr1.4:31068156-31068175 | MS.gene064959:intron | 30.0% | |
| AATGGGGAATAATTTAAGGA+TGG | + | chr1.4:31068754-31068773 | None:intergenic | 30.0% | |
| ACCATTATTTGTATCCTTTG+GGG | - | chr1.4:31069698-31069717 | MS.gene064959:intron | 30.0% | |
| AGAAATACAGAAAGAATTCC+TGG | + | chr1.4:31068418-31068437 | None:intergenic | 30.0% | |
| AGATACAAATAGCAGATTTG+TGG | + | chr1.4:31067421-31067440 | None:intergenic | 30.0% | |
| AGATAGCGTCAAAATATGTA+TGG | + | chr1.4:31070191-31070210 | None:intergenic | 30.0% | |
| ATAACTCAAAAAGAAAAGGG+GGG | + | chr1.4:31069732-31069751 | None:intergenic | 30.0% | |
| ATCATTGATCAGATTATCCT+TGG | + | chr1.4:31067391-31067410 | None:intergenic | 30.0% | |
| ATTCTATATGAAGCCGAATA+AGG | + | chr1.4:31066654-31066673 | None:intergenic | 30.0% | |
| ATTCTTCAAGGAATGACATT+AGG | + | chr1.4:31065898-31065917 | None:intergenic | 30.0% | |
| ATTGTGTGGTAACCTAAATT+TGG | - | chr1.4:31067617-31067636 | MS.gene064959:intron | 30.0% | |
| CAAAATAACCATACTAGAGT+GGG | - | chr1.4:31066281-31066300 | MS.gene064959:intron | 30.0% | |
| GAAAGTAGAAACATACATCA+GGG | + | chr1.4:31070127-31070146 | None:intergenic | 30.0% | |
| GAAATTACAATTGCTGCAAT+AGG | - | chr1.4:31069089-31069108 | MS.gene064959:intron | 30.0% | |
| GAAGAAAGAATTAAGGAATG+GGG | + | chr1.4:31068770-31068789 | None:intergenic | 30.0% | |
| GACCATTATTTGTATCCTTT+GGG | - | chr1.4:31069697-31069716 | MS.gene064959:intron | 30.0% | |
| GACCTAGATAAAAGTTTACA+AGG | - | chr1.4:31066114-31066133 | MS.gene064959:intron | 30.0% | |
| GAGAAATTAGGAACTATATC+AGG | + | chr1.4:31068082-31068101 | None:intergenic | 30.0% | |
| GGAAGAAAGAATTAAGGAAT+GGG | + | chr1.4:31068771-31068790 | None:intergenic | 30.0% | |
| TACTCTGTTACGTTAAGATA+TGG | - | chr1.4:31068300-31068319 | MS.gene064959:intron | 30.0% | |
| TAGGATATCTGATGAAGATT+CGG | + | chr1.4:31069535-31069554 | None:intergenic | 30.0% | |
| TCAAAATAACCATACTAGAG+TGG | - | chr1.4:31066280-31066299 | MS.gene064959:intron | 30.0% | |
| TCAACTATAATGCTATGGAA+TGG | - | chr1.4:31068609-31068628 | MS.gene064959:intron | 30.0% | |
| TGAAAGTAGAAACATACATC+AGG | + | chr1.4:31070128-31070147 | None:intergenic | 30.0% | |
| TGGAAATACAAAATCTGGAA+AGG | - | chr1.4:31068152-31068171 | MS.gene064959:intron | 30.0% | |
| TGGAAGAAAGAATTAAGGAA+TGG | + | chr1.4:31068772-31068791 | None:intergenic | 30.0% | |
| TGTATGGAATGTAGGTAAAA+TGG | + | chr1.4:31070175-31070194 | None:intergenic | 30.0% | |
| TTATGAGTTTGTGCATACTA+AGG | + | chr1.4:31066841-31066860 | None:intergenic | 30.0% | |
| TTCATGTTATGCATGATCTT+TGG | - | chr1.4:31068970-31068989 | MS.gene064959:intron | 30.0% | |
| TTCTCTTTCTGTGAGAAATT+AGG | + | chr1.4:31068094-31068113 | None:intergenic | 30.0% | |
| TTCTTCAAGGAATGACATTA+GGG | + | chr1.4:31065897-31065916 | None:intergenic | 30.0% | |
| TTGAAATTGAGAAAAGAAGG+TGG | + | chr1.4:31065935-31065954 | None:intergenic | 30.0% | |
| ! | AACCTCACTTTAAAAGCTAT+AGG | + | chr1.4:31069797-31069816 | None:intergenic | 30.0% |
| ! | ATACGAACTAAAGGTATACA+CGG | + | chr1.4:31066340-31066359 | None:intergenic | 30.0% |
| ! | TCATTTTGCCTTTGATTATC+TGG | + | chr1.4:31067168-31067187 | None:intergenic | 30.0% |
| ! | TGTCTGTGTAAAACTGTTTT+CGG | - | chr1.4:31066310-31066329 | MS.gene064959:intron | 30.0% |
| ! | TTATACTGTCTTTTGTGCTT+AGG | - | chr1.4:31066673-31066692 | MS.gene064959:intron | 30.0% |
| !! | GTTTTATGTTGGATTAGGTT+GGG | + | chr1.4:31069172-31069191 | None:intergenic | 30.0% |
| !!! | ATCCTATAGCTTTTAAAGTG+AGG | - | chr1.4:31069792-31069811 | MS.gene064959:intron | 30.0% |
| !!! | TGTATTCTGTGGTTTTATGT+TGG | + | chr1.4:31069183-31069202 | None:intergenic | 30.0% |
| !!! | TGTCATTTTTGTGGCTTTTA+AGG | - | chr1.4:31066431-31066450 | MS.gene064959:intron | 30.0% |
| AAAAGTTTGATGAGGAGCTT+CGG | - | chr1.4:31067934-31067953 | MS.gene064959:intron | 35.0% | |
| AAAGGAAAAAGAAGCAGAGA+TGG | + | chr1.4:31068903-31068922 | None:intergenic | 35.0% | |
| AAATCTAAATCCATGCCAGT+AGG | + | chr1.4:31070029-31070048 | None:intergenic | 35.0% | |
| AATACCAGAATGAGTACTTG+AGG | + | chr1.4:31069493-31069512 | None:intergenic | 35.0% | |
| AATCTAAATCCATGCCAGTA+GGG | + | chr1.4:31070028-31070047 | None:intergenic | 35.0% | |
| ACAGAGTACATATGTTGGAA+AGG | + | chr1.4:31068288-31068307 | None:intergenic | 35.0% | |
| ACAGCAAGCAAGATTACTAT+AGG | + | chr1.4:31069554-31069573 | None:intergenic | 35.0% | |
| ACGTAACAGAGTACATATGT+TGG | + | chr1.4:31068293-31068312 | None:intergenic | 35.0% | |
| ACTCAAGATGCGATAAACTA+GGG | + | chr1.4:31067102-31067121 | None:intergenic | 35.0% | |
| AGAGAAAATGCTGCAATAAC+GGG | - | chr1.4:31068108-31068127 | MS.gene064959:intron | 35.0% | |
| AGCGTACAAACAGATTACTA+TGG | - | chr1.4:31069289-31069308 | MS.gene064959:intron | 35.0% | |
| AGGATACAAATAATGGTCCA+AGG | + | chr1.4:31069695-31069714 | None:intergenic | 35.0% | |
| ATCAGAGAATCTAATAGCTG+AGG | + | chr1.4:31067259-31067278 | None:intergenic | 35.0% | |
| CACATAAACGACAACATGAT+AGG | + | chr1.4:31068247-31068266 | None:intergenic | 35.0% | |
| CATGACGTATAAAACAATGG+TGG | + | chr1.4:31066251-31066270 | None:intergenic | 35.0% | |
| CATTATTTGTATCCTTTGGG+GGG | - | chr1.4:31069700-31069719 | MS.gene064959:intron | 35.0% | |
| CATTTCAGTGCAAAATAGAG+TGG | - | chr1.4:31070214-31070233 | MS.gene064959:intron | 35.0% | |
| CCACAAACATGGATCATTTA+CGG | - | chr1.4:31067509-31067528 | MS.gene064959:intron | 35.0% | |
| CCATTATTTGTATCCTTTGG+GGG | - | chr1.4:31069699-31069718 | MS.gene064959:intron | 35.0% | |
| CCTGATGGAAATACAAAATC+TGG | - | chr1.4:31068147-31068166 | MS.gene064959:intron | 35.0% | |
| CTATGGTACAATAGTATAGG+TGG | + | chr1.4:31065778-31065797 | None:intergenic | 35.0% | |
| CTGAAATTCACTCTAAACAG+AGG | - | chr1.4:31068546-31068565 | MS.gene064959:intron | 35.0% | |
| CTGTATGACCAGATAATCAA+AGG | - | chr1.4:31067157-31067176 | MS.gene064959:intron | 35.0% | |
| CTTACCTCAATGTTGTAAAG+AGG | + | chr1.4:31065672-31065691 | None:intergenic | 35.0% | |
| GAAATTGAAGATATTAGGCG+AGG | - | chr1.4:31067204-31067223 | MS.gene064959:intron | 35.0% | |
| GAGACAAGAACAGAACAAAT+GGG | + | chr1.4:31068881-31068900 | None:intergenic | 35.0% | |
| GAGAGTGGAAGAAAGAATTA+AGG | + | chr1.4:31068777-31068796 | None:intergenic | 35.0% | |
| GGACCATTATTTGTATCCTT+TGG | - | chr1.4:31069696-31069715 | MS.gene064959:intron | 35.0% | |
| GGACTAACATGGTTATCAAA+TGG | + | chr1.4:31066793-31066812 | None:intergenic | 35.0% | |
| GTATTGTGCTTCTACATCAA+AGG | + | chr1.4:31066814-31066833 | None:intergenic | 35.0% | |
| GTCAAATGTCGAACAAATGT+TGG | + | chr1.4:31069389-31069408 | None:intergenic | 35.0% | |
| TAAGTTTCTTACCCTTGTTC+TGG | - | chr1.4:31069203-31069222 | MS.gene064959:intron | 35.0% | |
| TACAAAGTACGAACAGTTGT+TGG | - | chr1.4:31067830-31067849 | MS.gene064959:CDS | 35.0% | |
| TACATATGTTGGAAAGGACA+AGG | + | chr1.4:31068282-31068301 | None:intergenic | 35.0% | |
| TATTTCATTGTCATCCTGCA+AGG | + | chr1.4:31068644-31068663 | None:intergenic | 35.0% | |
| TCTACATCAAAGGACTAACA+TGG | + | chr1.4:31066804-31066823 | None:intergenic | 35.0% | |
| TCTATCATGTACAGCAAATG+CGG | + | chr1.4:31067561-31067580 | None:intergenic | 35.0% | |
| TGAAGAGTGGTAACCTTATT+CGG | - | chr1.4:31066638-31066657 | MS.gene064959:intron | 35.0% | |
| TGTTTGTTTATTGCCTCCTT+CGG | - | chr1.4:31069571-31069590 | MS.gene064959:intron | 35.0% | |
| ! | AATCTAATAGCTGAGGTATC+CGG | + | chr1.4:31067252-31067271 | None:intergenic | 35.0% |
| ! | ATGAACAAAAGCATAGCATC+AGG | - | chr1.4:31067289-31067308 | MS.gene064959:intron | 35.0% |
| ! | CACTTCTGTCGTAACATTTT+CGG | + | chr1.4:31068485-31068504 | None:intergenic | 35.0% |
| ! | CCAGATTTTGTATTTCCATC+AGG | + | chr1.4:31068150-31068169 | None:intergenic | 35.0% |
| ! | GAACAGTACCATTTTCCTTT+TGG | + | chr1.4:31070273-31070292 | None:intergenic | 35.0% |
| ! | TTTTGCAACCAAGTTAGCTA+TGG | - | chr1.4:31070080-31070099 | MS.gene064959:intron | 35.0% |
| ! | TTTTTCCTTTCCTCCTAAGT+TGG | - | chr1.4:31068913-31068932 | MS.gene064959:intron | 35.0% |
| !! | AAGAAGCATTAACTGATGAC+AGG | + | chr1.4:31068952-31068971 | None:intergenic | 35.0% |
| !! | GGTTTTATGTTGGATTAGGT+TGG | + | chr1.4:31069173-31069192 | None:intergenic | 35.0% |
| !! | TACTGGCTTGAAATTCTTCA+AGG | + | chr1.4:31065910-31065929 | None:intergenic | 35.0% |
| !! | TTGTAATGATGGAACGGTTT+TGG | - | chr1.4:31066476-31066495 | MS.gene064959:intron | 35.0% |
| !!! | AATCTTGTTTTCCACATCCT+CGG | + | chr1.4:31068360-31068379 | None:intergenic | 35.0% |
| !!! | CCTTGCTTTTTTCTTTCTCT+GGG | - | chr1.4:31069641-31069660 | MS.gene064959:intron | 35.0% |
| !!! | CTGTGGTTTTATGTTGGATT+AGG | + | chr1.4:31069177-31069196 | None:intergenic | 35.0% |
| !!! | CTTGCTTTTTTCTTTCTCTG+GGG | - | chr1.4:31069642-31069661 | MS.gene064959:intron | 35.0% |
| !!! | GATTTTGGTGTCATTCTTTG+CGG | - | chr1.4:31066557-31066576 | MS.gene064959:intron | 35.0% |
| !!! | GCGTTTTTTTTCTGCAGATT+TGG | - | chr1.4:31066047-31066066 | MS.gene064959:intron | 35.0% |
| !!! | TCCTTGCTTTTTTCTTTCTC+TGG | - | chr1.4:31069640-31069659 | MS.gene064959:intron | 35.0% |
| AAATGTTGGTCGTACTGTGA+TGG | + | chr1.4:31069375-31069394 | None:intergenic | 40.0% | |
| AAATTCAGGGGCTTAATGGA+AGG | + | chr1.4:31068706-31068725 | None:intergenic | 40.0% | |
| AACACCCAGTTAACTCAAAC+TGG | - | chr1.4:31069230-31069249 | MS.gene064959:intron | 40.0% | |
| AAGCAGTATGTGGGTTCATT+TGG | + | chr1.4:31070062-31070081 | None:intergenic | 40.0% | |
| AAGTAGACACTAGTTATCCG+AGG | - | chr1.4:31068340-31068359 | MS.gene064959:intron | 40.0% | |
| AATGGAGACAAATTCCTTGC+AGG | - | chr1.4:31068627-31068646 | MS.gene064959:CDS | 40.0% | |
| ACAAAATCTGGAAAGGAAGG+CGG | - | chr1.4:31068159-31068178 | MS.gene064959:intron | 40.0% | |
| ACACCCAGTTAACTCAAACT+GGG | - | chr1.4:31069231-31069250 | MS.gene064959:intron | 40.0% | |
| ACATACATCAGGGTTATCAC+AGG | + | chr1.4:31070117-31070136 | None:intergenic | 40.0% | |
| AGAGATGAAGCATAGTGAGA+AGG | + | chr1.4:31069839-31069858 | None:intergenic | 40.0% | |
| AGCAGAAGTTACAGAACAGA+GGG | - | chr1.4:31069067-31069086 | MS.gene064959:intron | 40.0% | |
| AGGAAAATTCAGGGGCTTAA+TGG | + | chr1.4:31068710-31068729 | None:intergenic | 40.0% | |
| AGGAATGACATTAGGGTTTC+TGG | + | chr1.4:31065890-31065909 | None:intergenic | 40.0% | |
| AGTAAGGAAAACAGGACAGA+GGG | + | chr1.4:31068833-31068852 | None:intergenic | 40.0% | |
| ATGTAGTGTGTGTGAATCAG+TGG | - | chr1.4:31066615-31066634 | MS.gene064959:intron | 40.0% | |
| ATTAATAGGGCCAACTTAGG+AGG | + | chr1.4:31068926-31068945 | None:intergenic | 40.0% | |
| ATTCTTTCTTCCACTCTCCT+TGG | - | chr1.4:31068779-31068798 | MS.gene064959:CDS | 40.0% | |
| CATTATTGACATATGGCCCA+AGG | + | chr1.4:31068799-31068818 | None:intergenic | 40.0% | |
| CATTCCTCAAGTACTCATTC+TGG | - | chr1.4:31069486-31069505 | MS.gene064959:intron | 40.0% | |
| CCAAGTTAGCTATGGAGAAA+TGG | - | chr1.4:31070088-31070107 | MS.gene064959:intron | 40.0% | |
| CCATTTCTCCATAGCTAACT+TGG | + | chr1.4:31070091-31070110 | None:intergenic | 40.0% | |
| CCCAGAGAAAGAAAAAAGCA+AGG | + | chr1.4:31069644-31069663 | None:intergenic | 40.0% | |
| CCCCCAAAGGATACAAATAA+TGG | + | chr1.4:31069702-31069721 | None:intergenic | 40.0% | |
| CCGTAAATGATCCATGTTTG+TGG | + | chr1.4:31067512-31067531 | None:intergenic | 40.0% | |
| CTCAAGATGCGATAAACTAG+GGG | + | chr1.4:31067101-31067120 | None:intergenic | 40.0% | |
| CTGTGATGGCATTGTCAATT+CGG | + | chr1.4:31069361-31069380 | None:intergenic | 40.0% | |
| CTTAATGGAAGGTTGGGAAT+GGG | + | chr1.4:31068695-31068714 | None:intergenic | 40.0% | |
| GAATGACATTAGGGTTTCTG+GGG | + | chr1.4:31065888-31065907 | None:intergenic | 40.0% | |
| GACTCAAGATGCGATAAACT+AGG | + | chr1.4:31067103-31067122 | None:intergenic | 40.0% | |
| GGAATGACATTAGGGTTTCT+GGG | + | chr1.4:31065889-31065908 | None:intergenic | 40.0% | |
| GGAGACAAGAACAGAACAAA+TGG | + | chr1.4:31068882-31068901 | None:intergenic | 40.0% | |
| GGCATTTCAATATGCCAGAT+TGG | - | chr1.4:31068448-31068467 | MS.gene064959:intron | 40.0% | |
| GGCTTGAAAGAACAACCAAA+AGG | - | chr1.4:31070255-31070274 | MS.gene064959:intron | 40.0% | |
| GTTTGTACGCTTCCAATGTT+AGG | + | chr1.4:31069280-31069299 | None:intergenic | 40.0% | |
| TAGCAGAAGTTACAGAACAG+AGG | - | chr1.4:31069066-31069085 | MS.gene064959:intron | 40.0% | |
| TCGATCTGGAAACATCATAC+CGG | - | chr1.4:31067230-31067249 | MS.gene064959:intron | 40.0% | |
| TGATGACAGGCCCATTAATA+GGG | + | chr1.4:31068939-31068958 | None:intergenic | 40.0% | |
| TGATTACCAAATCGTATGCC+TGG | + | chr1.4:31067344-31067363 | None:intergenic | 40.0% | |
| TGCACCTCTTTACAACATTG+AGG | - | chr1.4:31065665-31065684 | MS.gene064959:CDS | 40.0% | |
| TGGTTGCAAAAGCAGTATGT+GGG | + | chr1.4:31070071-31070090 | None:intergenic | 40.0% | |
| TGTGGGTTCATTTGGATCAA+CGG | + | chr1.4:31070054-31070073 | None:intergenic | 40.0% | |
| TTCTTTCTTCCACTCTCCTT+GGG | - | chr1.4:31068780-31068799 | MS.gene064959:CDS | 40.0% | |
| TTGCTGTACATGATAGAAGC+TGG | - | chr1.4:31067564-31067583 | MS.gene064959:intron | 40.0% | |
| TTGGTTGCAAAAGCAGTATG+TGG | + | chr1.4:31070072-31070091 | None:intergenic | 40.0% | |
| TTTCCATCAGGACTTGAAGT+AGG | + | chr1.4:31068138-31068157 | None:intergenic | 40.0% | |
| ! | CCTAAGTTGGCCCTATTAAT+GGG | - | chr1.4:31068926-31068945 | MS.gene064959:intron | 40.0% |
| ! | TCCTAAGTTGGCCCTATTAA+TGG | - | chr1.4:31068925-31068944 | MS.gene064959:intron | 40.0% |
| ! | TCTGTCCTGTTTTCCTTACT+CGG | - | chr1.4:31068833-31068852 | MS.gene064959:intron | 40.0% |
| !! | AACAGTTGTTGGCTTGTTTC+TGG | - | chr1.4:31067841-31067860 | MS.gene064959:CDS | 40.0% |
| !! | GAGAAAAGAAGGTGGATTAC+TGG | + | chr1.4:31065927-31065946 | None:intergenic | 40.0% |
| !! | TAATGATGGAACGGTTTTGG+CGG | - | chr1.4:31066479-31066498 | MS.gene064959:intron | 40.0% |
| !! | TTTCTCTGGGGTGTGTTTAT+GGG | - | chr1.4:31069654-31069673 | MS.gene064959:intron | 40.0% |
| !!! | CATGTTTTGATTGGCAGACA+CGG | + | chr1.4:31066413-31066432 | None:intergenic | 40.0% |
| !!! | GGGTGTTTTAACCAGAACAA+GGG | + | chr1.4:31069217-31069236 | None:intergenic | 40.0% |
| !!! | TGGGTGTTTTAACCAGAACA+AGG | + | chr1.4:31069218-31069237 | None:intergenic | 40.0% |
| !!! | TGGTTTCATTTTGGCTGTGT+TGG | - | chr1.4:31070234-31070253 | MS.gene064959:intron | 40.0% |
| AATTGCGCCTGACCTAACAT+TGG | - | chr1.4:31069265-31069284 | MS.gene064959:intron | 45.0% | |
| ACACTAGTTATCCGAGGATG+TGG | - | chr1.4:31068346-31068365 | MS.gene064959:intron | 45.0% | |
| ACGAACTAGCACCACAAACA+TGG | - | chr1.4:31067498-31067517 | MS.gene064959:intron | 45.0% | |
| AGATGCGATAAACTAGGGGA+AGG | + | chr1.4:31067097-31067116 | None:intergenic | 45.0% | |
| ATCATGTACAGCAAATGCGG+TGG | + | chr1.4:31067558-31067577 | None:intergenic | 45.0% | |
| ATGCGATAAACTAGGGGAAG+GGG | + | chr1.4:31067095-31067114 | None:intergenic | 45.0% | |
| CATATCACCCCACTCTAGTA+TGG | + | chr1.4:31066292-31066311 | None:intergenic | 45.0% | |
| CCCATTAATAGGGCCAACTT+AGG | + | chr1.4:31068929-31068948 | None:intergenic | 45.0% | |
| CTGATGACAGGCCCATTAAT+AGG | + | chr1.4:31068940-31068959 | None:intergenic | 45.0% | |
| CTTCTGCTAGTAGTTACTGC+AGG | + | chr1.4:31069055-31069074 | None:intergenic | 45.0% | |
| GAACGATGCGTTTCGTTTGA+AGG | + | chr1.4:31065863-31065882 | None:intergenic | 45.0% | |
| GAGTAAGGAAAACAGGACAG+AGG | + | chr1.4:31068834-31068853 | None:intergenic | 45.0% | |
| GATGCGATAAACTAGGGGAA+GGG | + | chr1.4:31067096-31067115 | None:intergenic | 45.0% | |
| GCTTAATGGAAGGTTGGGAA+TGG | + | chr1.4:31068696-31068715 | None:intergenic | 45.0% | |
| GTGGGTTCATTTGGATCAAC+GGG | + | chr1.4:31070053-31070072 | None:intergenic | 45.0% | |
| TACGCTTCCAATGTTAGGTC+AGG | + | chr1.4:31069275-31069294 | None:intergenic | 45.0% | |
| TCAGGCGCAATTGATTGACA+GGG | + | chr1.4:31069257-31069276 | None:intergenic | 45.0% | |
| TGAGAAACCACACGAAGCTT+TGG | + | chr1.4:31066707-31066726 | None:intergenic | 45.0% | |
| TGCTGATGAAAAAGTCGCCT+TGG | - | chr1.4:31067314-31067333 | MS.gene064959:intron | 45.0% | |
| TGTGAATCAGTGGTGAAGAG+TGG | - | chr1.4:31066625-31066644 | MS.gene064959:intron | 45.0% | |
| ! | AGGGGTGTGAGGAAAATTCA+GGG | + | chr1.4:31068719-31068738 | None:intergenic | 45.0% |
| ! | TGCGTTTCGTTTGAAGGTGT+TGG | + | chr1.4:31065857-31065876 | None:intergenic | 45.0% |
| !! | AGGCTTTGTTCAGACAGATG+AGG | + | chr1.4:31068062-31068081 | None:intergenic | 45.0% |
| !! | CTTTCTCTGGGGTGTGTTTA+TGG | - | chr1.4:31069653-31069672 | MS.gene064959:intron | 45.0% |
| !! | GGCTTTGTTCAGACAGATGA+GGG | + | chr1.4:31068061-31068080 | None:intergenic | 45.0% |
| !! | TTTGGTGTCATTCTTTGCGG+TGG | - | chr1.4:31066560-31066579 | MS.gene064959:intron | 45.0% |
| ATCTGCAAACCCTACTGGCA+TGG | - | chr1.4:31070016-31070035 | MS.gene064959:intron | 50.0% | |
| ATTAGGCGAGGAGTTCGATC+TGG | - | chr1.4:31067216-31067235 | MS.gene064959:intron | 50.0% | |
| CAGGGGCTTAATGGAAGGTT+GGG | + | chr1.4:31068701-31068720 | None:intergenic | 50.0% | |
| CAGTTTGGACAGATGCTGCT+TGG | + | chr1.4:31069953-31069972 | None:intergenic | 50.0% | |
| CGGAGTTACATGCACCAATC+TGG | + | chr1.4:31068465-31068484 | None:intergenic | 50.0% | |
| GGGGTGTGAGGAAAATTCAG+GGG | + | chr1.4:31068718-31068737 | None:intergenic | 50.0% | |
| GTCAGGCGCAATTGATTGAC+AGG | + | chr1.4:31069258-31069277 | None:intergenic | 50.0% | |
| GTTTCTGCCAAAGCTTCGTG+TGG | - | chr1.4:31066697-31066716 | MS.gene064959:intron | 50.0% | |
| TAGGGCCAACTTAGGAGGAA+AGG | + | chr1.4:31068921-31068940 | None:intergenic | 50.0% | |
| TCAGGGGCTTAATGGAAGGT+TGG | + | chr1.4:31068702-31068721 | None:intergenic | 50.0% | |
| TCTCCGGCGATTTCTTGTTG+CGG | + | chr1.4:31070304-31070323 | None:intergenic | 50.0% | |
| TGCGATAAACTAGGGGAAGG+GGG | + | chr1.4:31067094-31067113 | None:intergenic | 50.0% | |
| TGTCCAAACTGCAACAGCAG+CGG | - | chr1.4:31069962-31069981 | MS.gene064959:intron | 50.0% | |
| ! | AATTTTCCTCACACCCCTCG+TGG | - | chr1.4:31068721-31068740 | MS.gene064959:CDS | 50.0% |
| ! | AGGGCCCAGTTTGAGTTAAC+TGG | + | chr1.4:31069238-31069257 | None:intergenic | 50.0% |
| ! | GAGGGGTGTGAGGAAAATTC+AGG | + | chr1.4:31068720-31068739 | None:intergenic | 50.0% |
| ! | GGGCCCAGTTTGAGTTAACT+GGG | + | chr1.4:31069237-31069256 | None:intergenic | 50.0% |
| ! | TTGTAAAGAGGTGCACGACG+CGG | + | chr1.4:31065660-31065679 | None:intergenic | 50.0% |
| !! | GGATTAGGTTGGGAGAGACT+AGG | + | chr1.4:31069162-31069181 | None:intergenic | 50.0% |
| AAAAGTCGCCTTGGCTGTCC+AGG | - | chr1.4:31067323-31067342 | MS.gene064959:intron | 55.0% | |
| AACAGACTCAGGAGCCCAAC+CGG | + | chr1.4:31069611-31069630 | None:intergenic | 55.0% | |
| ATCGTATGCCTGGACAGCCA+AGG | + | chr1.4:31067334-31067353 | None:intergenic | 55.0% | |
| ATGGGCCCAAGACTCACACA+AGG | + | chr1.4:31068863-31068882 | None:intergenic | 55.0% | |
| GACATATGGCCCAAGGAGAG+TGG | + | chr1.4:31068792-31068811 | None:intergenic | 55.0% | |
| GCAACAAGAAATCGCCGGAG+AGG | - | chr1.4:31070303-31070322 | MS.gene064959:CDS | 55.0% | |
| GCAGCCCTTGTGTGAGTCTT+GGG | - | chr1.4:31068855-31068874 | MS.gene064959:intron | 55.0% | |
| GCCACATCTGCAAACCCTAC+TGG | - | chr1.4:31070011-31070030 | MS.gene064959:intron | 55.0% | |
| GCCAGTAGGGTTTGCAGATG+TGG | + | chr1.4:31070015-31070034 | None:intergenic | 55.0% | |
| GCGCCTACTTCAAGTCCTGA+TGG | - | chr1.4:31068132-31068151 | MS.gene064959:intron | 55.0% | |
| GGCTGCCGAGTAAGGAAAAC+AGG | + | chr1.4:31068841-31068860 | None:intergenic | 55.0% | |
| GGCTGTCCAGGCATACGATT+TGG | - | chr1.4:31067335-31067354 | MS.gene064959:intron | 55.0% | |
| GTGCCGCAACAAGAAATCGC+CGG | - | chr1.4:31070298-31070317 | MS.gene064959:CDS | 55.0% | |
| TCTGGAAAGGAAGGCGGTAG+AGG | - | chr1.4:31068165-31068184 | MS.gene064959:intron | 55.0% | |
| TGGGCCCAAGACTCACACAA+GGG | + | chr1.4:31068862-31068881 | None:intergenic | 55.0% | |
| TGGGGTGTGTTTATGGGCCT+CGG | - | chr1.4:31069660-31069679 | MS.gene064959:intron | 55.0% | |
| TTGCCTCCTTCGGCATGTCT+CGG | - | chr1.4:31069581-31069600 | MS.gene064959:intron | 55.0% | |
| TTTGATGAGGAGCTTCGGCG+TGG | - | chr1.4:31067939-31067958 | MS.gene064959:intron | 55.0% | |
| AACTGCAACAGCAGCGGCAG+TGG | - | chr1.4:31069968-31069987 | MS.gene064959:intron | 60.0% | |
| AAGGATGGAGCGTAGCCACG+AGG | + | chr1.4:31068739-31068758 | None:intergenic | 60.0% | |
| ACGACGCGGTTCTCTACCAC+CGG | + | chr1.4:31065646-31065665 | None:intergenic | 60.0% | |
| AGGATGGAGCGTAGCCACGA+GGG | + | chr1.4:31068738-31068757 | None:intergenic | 60.0% | |
| CACACAAGGGCTGCCGAGTA+AGG | + | chr1.4:31068849-31068868 | None:intergenic | 60.0% | |
| CATGTCTCGGGGATCCGGTT+GGG | - | chr1.4:31069594-31069613 | MS.gene064959:intron | 60.0% | |
| CTGCCGCTGCTGTTGCAGTT+TGG | + | chr1.4:31069968-31069987 | None:intergenic | 60.0% | |
| GGAAAGGAAGGCGGTAGAGG+AGG | - | chr1.4:31068168-31068187 | MS.gene064959:intron | 60.0% | |
| GGCAGCCCTTGTGTGAGTCT+TGG | - | chr1.4:31068854-31068873 | MS.gene064959:intron | 60.0% | |
| GGGGGGATAAAACCCCCCAA+AGG | + | chr1.4:31069715-31069734 | None:intergenic | 60.0% | |
| GTCCAAGGCACACACAACCG+AGG | + | chr1.4:31069680-31069699 | None:intergenic | 60.0% | |
| TGCCTCCTTCGGCATGTCTC+GGG | - | chr1.4:31069582-31069601 | MS.gene064959:intron | 60.0% | |
| TTCGGCATGTCTCGGGGATC+CGG | - | chr1.4:31069589-31069608 | MS.gene064959:intron | 60.0% | |
| GCATGTCTCGGGGATCCGGT+TGG | - | chr1.4:31069593-31069612 | MS.gene064959:intron | 65.0% | |
| GCCTCCTTCGGCATGTCTCG+GGG | - | chr1.4:31069583-31069602 | MS.gene064959:intron | 65.0% | |
| GGATCCCCGAGACATGCCGA+AGG | + | chr1.4:31069590-31069609 | None:intergenic | 65.0% | |
| GGATGGAGCGTAGCCACGAG+GGG | + | chr1.4:31068737-31068756 | None:intergenic | 65.0% | |
| GGCCTCGGTTGTGTGTGCCT+TGG | - | chr1.4:31069675-31069694 | MS.gene064959:intron | 65.0% | |
| TCCCCGAGACATGCCGAAGG+AGG | + | chr1.4:31069587-31069606 | None:intergenic | 65.0% | |
| ! | GCGTAGCCACGAGGGGTGTG+AGG | + | chr1.4:31068730-31068749 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 31065636 | 31070332 | 31065636 | ID=MS.gene064959 |
| chr1.4 | mRNA | 31065636 | 31070332 | 31065636 | ID=MS.gene064959.t1;Parent=MS.gene064959 |
| chr1.4 | exon | 31070282 | 31070332 | 31070282 | ID=MS.gene064959.t1.exon1;Parent=MS.gene064959.t1 |
| chr1.4 | CDS | 31070282 | 31070332 | 31070282 | ID=cds.MS.gene064959.t1;Parent=MS.gene064959.t1 |
| chr1.4 | exon | 31069871 | 31069904 | 31069871 | ID=MS.gene064959.t1.exon2;Parent=MS.gene064959.t1 |
| chr1.4 | CDS | 31069871 | 31069904 | 31069871 | ID=cds.MS.gene064959.t1;Parent=MS.gene064959.t1 |
| chr1.4 | exon | 31068612 | 31068799 | 31068612 | ID=MS.gene064959.t1.exon3;Parent=MS.gene064959.t1 |
| chr1.4 | CDS | 31068612 | 31068799 | 31068612 | ID=cds.MS.gene064959.t1;Parent=MS.gene064959.t1 |
| chr1.4 | exon | 31068008 | 31068071 | 31068008 | ID=MS.gene064959.t1.exon4;Parent=MS.gene064959.t1 |
| chr1.4 | CDS | 31068008 | 31068071 | 31068008 | ID=cds.MS.gene064959.t1;Parent=MS.gene064959.t1 |
| chr1.4 | exon | 31067769 | 31067862 | 31067769 | ID=MS.gene064959.t1.exon5;Parent=MS.gene064959.t1 |
| chr1.4 | CDS | 31067769 | 31067862 | 31067769 | ID=cds.MS.gene064959.t1;Parent=MS.gene064959.t1 |
| chr1.4 | exon | 31065838 | 31066024 | 31065838 | ID=MS.gene064959.t1.exon6;Parent=MS.gene064959.t1 |
| chr1.4 | CDS | 31065838 | 31066024 | 31065838 | ID=cds.MS.gene064959.t1;Parent=MS.gene064959.t1 |
| chr1.4 | exon | 31065636 | 31065746 | 31065636 | ID=MS.gene064959.t1.exon7;Parent=MS.gene064959.t1 |
| chr1.4 | CDS | 31065636 | 31065746 | 31065636 | ID=cds.MS.gene064959.t1;Parent=MS.gene064959.t1 |
| Gene Sequence |
| Protein sequence |
