Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065375.t1 | XP_003624478.1 | 98.6 | 369 | 5 | 0 | 2 | 370 | 5 | 373 | 1.50E-207 | 731.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065375.t1 | Q9FMU6 | 79.5 | 365 | 65 | 3 | 8 | 363 | 3 | 366 | 4.6e-165 | 582.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065375.t1 | Q2HUK6 | 98.6 | 369 | 5 | 0 | 2 | 370 | 5 | 373 | 1.1e-207 | 731.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene065375 | MS.gene86518 | PPI |
| MS.gene065375 | MS.gene72685 | PPI |
| MS.gene065375 | MS.gene64914 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065375.t1 | MTR_7g083790 | 98.391 | 373 | 3 | 1 | 1 | 370 | 1 | 373 | 0.0 | 740 |
| MS.gene065375.t1 | MTR_8g099910 | 77.654 | 358 | 75 | 2 | 6 | 363 | 5 | 357 | 0.0 | 563 |
| MS.gene065375.t1 | MTR_6g033280 | 71.633 | 349 | 89 | 2 | 11 | 358 | 3 | 342 | 0.0 | 517 |
| MS.gene065375.t1 | MTR_4g094578 | 43.253 | 289 | 162 | 1 | 74 | 360 | 24 | 312 | 1.64e-87 | 267 |
| MS.gene065375.t1 | MTR_5g024770 | 46.643 | 283 | 129 | 1 | 71 | 353 | 13 | 273 | 1.80e-86 | 264 |
| MS.gene065375.t1 | MTR_6g034515 | 29.008 | 262 | 150 | 9 | 89 | 331 | 77 | 321 | 4.13e-16 | 79.3 |
| MS.gene065375.t1 | MTR_3g107510 | 26.339 | 224 | 156 | 5 | 44 | 264 | 86 | 303 | 1.15e-15 | 78.2 |
| MS.gene065375.t1 | MTR_2g436930 | 24.686 | 239 | 155 | 4 | 79 | 295 | 15 | 250 | 1.99e-13 | 70.9 |
| MS.gene065375.t1 | MTR_2g436930 | 26.263 | 198 | 119 | 7 | 75 | 249 | 125 | 318 | 5.63e-11 | 63.5 |
| MS.gene065375.t1 | MTR_1g012030 | 27.322 | 183 | 129 | 3 | 82 | 264 | 142 | 320 | 4.13e-13 | 70.5 |
| MS.gene065375.t1 | MTR_8g076760 | 25.714 | 210 | 121 | 7 | 68 | 253 | 105 | 303 | 4.17e-13 | 69.7 |
| MS.gene065375.t1 | MTR_8g027975 | 27.863 | 262 | 166 | 9 | 73 | 315 | 43 | 300 | 4.40e-13 | 70.1 |
| MS.gene065375.t1 | MTR_8g027975 | 24.737 | 190 | 119 | 5 | 86 | 251 | 160 | 349 | 4.80e-12 | 67.0 |
| MS.gene065375.t1 | MTR_5g009500 | 25.789 | 190 | 119 | 5 | 86 | 253 | 147 | 336 | 4.63e-13 | 70.1 |
| MS.gene065375.t1 | MTR_5g009500 | 27.984 | 243 | 149 | 9 | 71 | 295 | 28 | 262 | 4.09e-12 | 67.0 |
| MS.gene065375.t1 | MTR_4g119770 | 23.750 | 240 | 158 | 4 | 79 | 295 | 14 | 251 | 5.55e-13 | 68.6 |
| MS.gene065375.t1 | MTR_7g084400 | 30.493 | 223 | 142 | 6 | 75 | 293 | 210 | 423 | 7.46e-13 | 70.1 |
| MS.gene065375.t1 | MTR_4g119770 | 23.750 | 240 | 158 | 4 | 79 | 295 | 14 | 251 | 9.77e-13 | 68.9 |
| MS.gene065375.t1 | MTR_4g119770 | 24.390 | 205 | 126 | 7 | 75 | 255 | 126 | 325 | 5.04e-11 | 63.5 |
| MS.gene065375.t1 | MTR_8g096050 | 30.734 | 218 | 136 | 7 | 80 | 293 | 229 | 435 | 1.89e-12 | 68.9 |
| MS.gene065375.t1 | MTR_7g084400 | 30.729 | 192 | 126 | 4 | 75 | 262 | 204 | 392 | 3.33e-12 | 67.8 |
| MS.gene065375.t1 | MTR_7g109135 | 30.000 | 190 | 114 | 7 | 89 | 264 | 34 | 218 | 3.51e-12 | 65.9 |
| MS.gene065375.t1 | MTR_3g098460 | 30.000 | 220 | 135 | 8 | 80 | 293 | 207 | 413 | 3.61e-12 | 67.8 |
| MS.gene065375.t1 | MTR_7g109135 | 28.421 | 190 | 117 | 6 | 89 | 264 | 133 | 317 | 4.11e-12 | 67.0 |
| MS.gene065375.t1 | MTR_7g109135 | 28.421 | 190 | 117 | 6 | 89 | 264 | 55 | 239 | 5.78e-12 | 65.5 |
| MS.gene065375.t1 | MTR_4g114320 | 25.824 | 182 | 124 | 4 | 82 | 259 | 126 | 300 | 2.05e-11 | 65.1 |
| MS.gene065375.t1 | MTR_2g436930 | 26.263 | 198 | 119 | 7 | 75 | 249 | 35 | 228 | 3.14e-11 | 63.2 |
| MS.gene065375.t1 | MTR_5g073040 | 25.874 | 286 | 184 | 7 | 80 | 350 | 41 | 313 | 8.71e-11 | 62.8 |
| MS.gene065375.t1 | MTR_1g087840 | 27.746 | 173 | 105 | 6 | 93 | 251 | 33 | 199 | 9.20e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065375.t1 | AT5G14040 | 78.904 | 365 | 69 | 2 | 7 | 363 | 2 | 366 | 0.0 | 574 |
| MS.gene065375.t1 | AT3G48850 | 68.820 | 356 | 108 | 1 | 7 | 362 | 2 | 354 | 0.0 | 510 |
| MS.gene065375.t1 | AT2G17270 | 50.993 | 302 | 143 | 3 | 68 | 368 | 11 | 308 | 4.69e-107 | 317 |
| MS.gene065375.t1 | AT5G66380 | 26.636 | 214 | 122 | 8 | 68 | 258 | 102 | 303 | 5.61e-14 | 72.4 |
| MS.gene065375.t1 | AT5G51050 | 29.474 | 285 | 168 | 12 | 80 | 348 | 225 | 492 | 6.64e-14 | 73.2 |
| MS.gene065375.t1 | AT1G25380 | 27.895 | 190 | 121 | 6 | 89 | 266 | 131 | 316 | 2.91e-13 | 70.9 |
| MS.gene065375.t1 | AT1G25380 | 27.895 | 190 | 121 | 6 | 89 | 266 | 131 | 316 | 2.91e-13 | 70.9 |
| MS.gene065375.t1 | AT3G53940 | 28.729 | 181 | 114 | 6 | 80 | 251 | 182 | 356 | 8.77e-13 | 69.3 |
| MS.gene065375.t1 | AT4G01100 | 25.794 | 252 | 157 | 8 | 71 | 295 | 32 | 280 | 1.38e-12 | 68.6 |
| MS.gene065375.t1 | AT1G79900 | 25.253 | 198 | 144 | 3 | 67 | 264 | 98 | 291 | 1.39e-12 | 68.2 |
| MS.gene065375.t1 | AT4G01100 | 26.778 | 239 | 157 | 8 | 71 | 295 | 32 | 266 | 1.97e-12 | 68.2 |
| MS.gene065375.t1 | AT5G48970 | 25.373 | 201 | 120 | 6 | 75 | 249 | 132 | 328 | 1.27e-11 | 65.5 |
| MS.gene065375.t1 | AT5G48970 | 23.431 | 239 | 159 | 4 | 80 | 295 | 23 | 260 | 2.92e-11 | 64.7 |
| MS.gene065375.t1 | AT5G48970 | 25.373 | 201 | 120 | 6 | 75 | 249 | 61 | 257 | 1.29e-11 | 64.7 |
| MS.gene065375.t1 | AT4G01100 | 25.571 | 219 | 149 | 6 | 88 | 295 | 1 | 216 | 3.85e-11 | 63.9 |
| MS.gene065375.t1 | AT4G32400 | 28.261 | 184 | 117 | 4 | 72 | 249 | 205 | 379 | 4.35e-11 | 64.3 |
| MS.gene065375.t1 | AT2G47490 | 27.174 | 184 | 122 | 5 | 91 | 265 | 129 | 309 | 8.63e-11 | 62.8 |
| MS.gene065375.t1 | AT1G07030 | 27.374 | 179 | 120 | 4 | 74 | 249 | 36 | 207 | 8.90e-11 | 62.8 |
Find 123 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCCGACTTGACAAATTT+TGG | 0.064803 | 7.1:-21247452 | None:intergenic |
| GCACAGGGTGCTTGCAAATT+TGG | 0.141897 | 7.1:+21247233 | MS.gene065375:CDS |
| CCTTTGCTGCACTCATTCTT+TGG | 0.207799 | 7.1:-21248464 | None:intergenic |
| GTAGATCAAGGTCTTGTATT+TGG | 0.240422 | 7.1:-21247312 | None:intergenic |
| GTGAATAACCGGTAGGGTTT+TGG | 0.271570 | 7.1:-21245830 | None:intergenic |
| CACAGGGTGCTTGCAAATTT+GGG | 0.272981 | 7.1:+21247234 | MS.gene065375:CDS |
| ACAAGGGATTAGTGCCTCTA+TGG | 0.295974 | 7.1:+21247606 | MS.gene065375:CDS |
| ATCACCAACTGTTGCTCCTT+TGG | 0.305945 | 7.1:-21248588 | None:intergenic |
| GTCAAGTCGGAAGGAGCTTT+GGG | 0.313946 | 7.1:+21247461 | MS.gene065375:CDS |
| CTGCACTCATTCTTTGGTTG+TGG | 0.319170 | 7.1:-21248458 | None:intergenic |
| CCTTCTCCTAAGGAACCTTT+TGG | 0.320200 | 7.1:+21245934 | MS.gene065375:CDS |
| ACCAAGACCTCTTGCAAAAC+CGG | 0.326720 | 7.1:-21247420 | None:intergenic |
| TGCACTCATTCTTTGGTTGT+GGG | 0.330467 | 7.1:-21248457 | None:intergenic |
| TTCTATGCTGCTTGTACTGC+TGG | 0.334701 | 7.1:+21245982 | MS.gene065375:CDS |
| GGCGCGGCGGCGGAAGGAGC+GGG | 0.336833 | 7.1:-21245871 | None:intergenic |
| CCGCCTTCACTCCGTGGAAC+TGG | 0.348054 | 7.1:+21245892 | MS.gene065375:CDS |
| TGTCAAGTCGGAAGGAGCTT+TGG | 0.366299 | 7.1:+21247460 | MS.gene065375:CDS |
| TTTGCTGGTGGATACATTGC+TGG | 0.369619 | 7.1:+21248506 | MS.gene065375:CDS |
| CGGCGCGGCGGCGGAAGGAG+CGG | 0.370068 | 7.1:-21245872 | None:intergenic |
| GTTCAAGGAGCAGGGAGTTA+AGG | 0.373432 | 7.1:+21247169 | MS.gene065375:CDS |
| CGTTGCACTTTGCCCATTCG+AGG | 0.378339 | 7.1:+21247370 | MS.gene065375:CDS |
| TTCAAGGAGCAGGGAGTTAA+GGG | 0.378873 | 7.1:+21247170 | MS.gene065375:CDS |
| TTGTATTTGGCTGCATACTC+CGG | 0.387254 | 7.1:-21247299 | None:intergenic |
| CCTCTCCGTATTGTTATGAT+TGG | 0.392836 | 7.1:+21248755 | MS.gene065375:CDS |
| GTTATGATTGGAACACTTAC+CGG | 0.392999 | 7.1:+21248767 | MS.gene065375:CDS |
| GGCGGCGGAAGGAGCGGGAC+CGG | 0.404628 | 7.1:-21245866 | None:intergenic |
| TCCTTTGCAATCTCTGCAAT+GGG | 0.410320 | 7.1:-21248949 | None:intergenic |
| ATGCAGGCTGTTGCGAAGTT+TGG | 0.417122 | 7.1:+21248704 | MS.gene065375:intron |
| CTGACGATCTGGTGAATAAC+CGG | 0.417433 | 7.1:-21245841 | None:intergenic |
| AAGTACAAGAGCATCTCATC+AGG | 0.418546 | 7.1:+21247134 | MS.gene065375:CDS |
| GATGCTTTCAAAGTCTTTGT+GGG | 0.421116 | 7.1:+21248809 | MS.gene065375:CDS |
| TTGCAAGAGGTCTTGGTGAT+GGG | 0.421210 | 7.1:+21247426 | MS.gene065375:CDS |
| TGATGCTTTCAAAGTCTTTG+TGG | 0.429250 | 7.1:+21248808 | MS.gene065375:CDS |
| ATTCACCAGATCGTCAGTTC+CGG | 0.433147 | 7.1:+21245847 | MS.gene065375:CDS |
| AAGACCTTGATCTACCTTGC+TGG | 0.435876 | 7.1:+21247320 | MS.gene065375:CDS |
| AAGTACTATTCTGATATTGC+TGG | 0.438339 | 7.1:+21247275 | MS.gene065375:CDS |
| GAGATGCTCTTGTACTTGGC+AGG | 0.444922 | 7.1:-21247128 | None:intergenic |
| TTCCTTTGCAATCTCTGCAA+TGG | 0.446057 | 7.1:-21248950 | None:intergenic |
| TTTGCAAGAGGTCTTGGTGA+TGG | 0.446061 | 7.1:+21247425 | MS.gene065375:CDS |
| TCACTCCGTGGAACTGGATC+CGG | 0.455713 | 7.1:+21245898 | MS.gene065375:CDS |
| GCAATCTCTGCAATGGGAGC+AGG | 0.456052 | 7.1:-21248943 | None:intergenic |
| AAGAGCATCTCATCAGGGTT+TGG | 0.458213 | 7.1:+21247140 | MS.gene065375:CDS |
| GAGTGAAGGCGGCGCGGCGG+CGG | 0.460339 | 7.1:-21245881 | None:intergenic |
| CTCATTCTTTGGTTGTGGGA+TGG | 0.461022 | 7.1:-21248453 | None:intergenic |
| GAAGGCGGCGCGGCGGCGGA+AGG | 0.466553 | 7.1:-21245877 | None:intergenic |
| TGATGAGATGCTCTTGTACT+TGG | 0.466999 | 7.1:-21247132 | None:intergenic |
| ATCTTGCCAAAAGGTTCCTT+AGG | 0.467490 | 7.1:-21245940 | None:intergenic |
| GGATGGGTCCCTACATTACT+TGG | 0.467879 | 7.1:+21247203 | MS.gene065375:CDS |
| CTATTCTGATATTGCTGGCC+CGG | 0.479315 | 7.1:+21247280 | MS.gene065375:CDS |
| GGAGCAGCACCACCGGTTGT+TGG | 0.480665 | 7.1:-21248922 | None:intergenic |
| TGTATTTGGCTGCATACTCC+GGG | 0.482403 | 7.1:-21247298 | None:intergenic |
| ATATTTGTTAGGCCAACAAC+CGG | 0.488505 | 7.1:+21248910 | MS.gene065375:intron |
| CGGGACCGGAACTGACGATC+TGG | 0.489410 | 7.1:-21245852 | None:intergenic |
| CAAGGGATTAGTGCCTCTAT+GGG | 0.492057 | 7.1:+21247607 | MS.gene065375:CDS |
| TTATGATTGCAGGCTGTACA+AGG | 0.497538 | 7.1:+21247589 | MS.gene065375:intron |
| CTCAACAATGGTCTCAAAAG+AGG | 0.497947 | 7.1:-21248414 | None:intergenic |
| ATTCATGATTCCTTCTCCTA+AGG | 0.502454 | 7.1:+21245924 | MS.gene065375:CDS |
| ATATATTCCCCACTGGGCTC+CGG | 0.504355 | 7.1:-21248786 | None:intergenic |
| CCAAAGAATGAGTGCAGCAA+AGG | 0.506478 | 7.1:+21248464 | MS.gene065375:CDS |
| GTTGCGAAGTTTGGTGTGGT+TGG | 0.508050 | 7.1:+21248713 | MS.gene065375:CDS |
| ATTACTTGGTTACAGTGCAC+AGG | 0.515158 | 7.1:+21247217 | MS.gene065375:CDS |
| ATGATTCCTTCATTTCTCTA+CGG | 0.518236 | 7.1:+21245799 | MS.gene065375:CDS |
| TTCTTCCACCAAAACCCTAC+CGG | 0.523169 | 7.1:+21245822 | MS.gene065375:CDS |
| AAAGAGACAAGGTTATCAGC+AGG | 0.524035 | 7.1:-21248554 | None:intergenic |
| ATGAAGGAATCATGTTTCTA+CGG | 0.525899 | 7.1:-21245789 | None:intergenic |
| GGGAGCAGGAGCAGCACCAC+CGG | 0.526192 | 7.1:-21248929 | None:intergenic |
| TACATCTCGATCTTGCCAAA+AGG | 0.527813 | 7.1:-21245949 | None:intergenic |
| CTTAGTCAAGTGTAATATGC+AGG | 0.531917 | 7.1:+21246053 | MS.gene065375:CDS |
| GCACTGTAACCAAGTAATGT+AGG | 0.533624 | 7.1:-21247212 | None:intergenic |
| CCAAAAGGTTCCTTAGGAGA+AGG | 0.534266 | 7.1:-21245934 | None:intergenic |
| GAAGAACCGTAGAGAAATGA+AGG | 0.537076 | 7.1:-21245805 | None:intergenic |
| GGACTTTAACAGCCTCGAAT+GGG | 0.537558 | 7.1:-21247382 | None:intergenic |
| GTACAAGCAGCATAGAAAGC+AGG | 0.538163 | 7.1:-21245976 | None:intergenic |
| AAGCATCATATATTCCCCAC+TGG | 0.538260 | 7.1:-21248793 | None:intergenic |
| AACACTTACCGGAGCCCAGT+GGG | 0.541109 | 7.1:+21248778 | MS.gene065375:CDS |
| TATGCTGCTTGTACTGCTGG+TGG | 0.545880 | 7.1:+21245985 | MS.gene065375:CDS |
| CAAAGAATGAGTGCAGCAAA+GGG | 0.546393 | 7.1:+21248465 | MS.gene065375:CDS |
| CACTGTAACCAAGTAATGTA+GGG | 0.552514 | 7.1:-21247211 | None:intergenic |
| CCAAAATTTGTCAAGTCGGA+AGG | 0.555895 | 7.1:+21247452 | MS.gene065375:CDS |
| CCAAGACCTCTTGCAAAACC+GGG | 0.555939 | 7.1:-21247419 | None:intergenic |
| CGGACTTTAACAGCCTCGAA+TGG | 0.556736 | 7.1:-21247383 | None:intergenic |
| TGCTGGTTCAGCATCTGCTG+AGG | 0.562706 | 7.1:+21247337 | MS.gene065375:CDS |
| AGAAGGAATCATGAATCTAC+CGG | 0.563282 | 7.1:-21245917 | None:intergenic |
| TGCAGCAAAGGGCTGCAACT+TGG | 0.564769 | 7.1:+21248476 | MS.gene065375:CDS |
| GTCCGTGTTCAAACTCAGCC+CGG | 0.566951 | 7.1:+21247401 | MS.gene065375:CDS |
| CTTATAGATTTGCTCAACAA+TGG | 0.571646 | 7.1:-21248426 | None:intergenic |
| GCCGCGCCGCCTTCACTCCG+TGG | 0.578747 | 7.1:+21245886 | MS.gene065375:CDS |
| GTGTTCCAATCATAACAATA+CGG | 0.581864 | 7.1:-21248760 | None:intergenic |
| GATCCAGTTCCACGGAGTGA+AGG | 0.581952 | 7.1:-21245895 | None:intergenic |
| TGAACCAGCAAGGTAGATCA+AGG | 0.583686 | 7.1:-21247324 | None:intergenic |
| ATGCTTTCAAAGTCTTTGTG+GGG | 0.587996 | 7.1:+21248810 | MS.gene065375:CDS |
| AGCATCATATATTCCCCACT+GGG | 0.588188 | 7.1:-21248792 | None:intergenic |
| CGTTGTTCAGAAAAGAGACA+AGG | 0.592020 | 7.1:-21248565 | None:intergenic |
| GGAATCTGCCTTCCCCATAG+AGG | 0.592926 | 7.1:-21247620 | None:intergenic |
| CGATCTGGTGAATAACCGGT+AGG | 0.594124 | 7.1:-21245837 | None:intergenic |
| AATACGGAGAGGGAGACCTC+TGG | 0.599896 | 7.1:-21248744 | None:intergenic |
| GTGGTTGGTCTCTTCACCAG+AGG | 0.608443 | 7.1:+21248728 | MS.gene065375:CDS |
| GGCTGTTGCGAAGTTTGGTG+TGG | 0.612493 | 7.1:+21248709 | MS.gene065375:intron |
| GATTAGTGCCTCTATGGGGA+AGG | 0.612930 | 7.1:+21247612 | MS.gene065375:CDS |
| CCAGTTCCACGGAGTGAAGG+CGG | 0.613356 | 7.1:-21245892 | None:intergenic |
| AACGCCAAAGGAGCAACAGT+TGG | 0.613664 | 7.1:+21248584 | MS.gene065375:CDS |
| GCTGGTGGAATTCTTAGCTG+TGG | 0.615544 | 7.1:+21246000 | MS.gene065375:CDS |
| ACGGAGTGAAGGCGGCGCGG+CGG | 0.615971 | 7.1:-21245884 | None:intergenic |
| GCTCCCAAAATTTGTCAAGT+CGG | 0.621493 | 7.1:+21247448 | MS.gene065375:CDS |
| AGATGCTCTTGTACTTGGCA+GGG | 0.621873 | 7.1:-21247127 | None:intergenic |
| CAATCATAACAATACGGAGA+GGG | 0.625979 | 7.1:-21248754 | None:intergenic |
| TCAAGTCGGAAGGAGCTTTG+GGG | 0.630516 | 7.1:+21247462 | MS.gene065375:CDS |
| TTACACTTGACTAAGTCAAG+AGG | 0.631255 | 7.1:-21246045 | None:intergenic |
| TTACTTGGTTACAGTGCACA+GGG | 0.631543 | 7.1:+21247218 | MS.gene065375:CDS |
| TCCCATTGCAGAGATTGCAA+AGG | 0.636460 | 7.1:+21248948 | MS.gene065375:CDS |
| CAGCAGATGCTGAACCAGCA+AGG | 0.642348 | 7.1:-21247334 | None:intergenic |
| ATCTACCGGATCCAGTTCCA+CGG | 0.647055 | 7.1:-21245903 | None:intergenic |
| GATCTGGTGAATAACCGGTA+GGG | 0.649771 | 7.1:-21245836 | None:intergenic |
| TATGATTGCAGGCTGTACAA+GGG | 0.654041 | 7.1:+21247590 | MS.gene065375:intron |
| TCCACGGAGTGAAGGCGGCG+CGG | 0.654298 | 7.1:-21245887 | None:intergenic |
| TTTGTTAGGCCAACAACCGG+TGG | 0.658305 | 7.1:+21248913 | MS.gene065375:intron |
| AACCGGGCTGAGTTTGAACA+CGG | 0.669826 | 7.1:-21247403 | None:intergenic |
| AGTACAAGAGCATCTCATCA+GGG | 0.671144 | 7.1:+21247135 | MS.gene065375:CDS |
| GTAATGTAGGGACCCATCCG+CGG | 0.692836 | 7.1:-21247199 | None:intergenic |
| GAACACTTACCGGAGCCCAG+TGG | 0.694776 | 7.1:+21248777 | MS.gene065375:CDS |
| AAGGGATTAGTGCCTCTATG+GGG | 0.721830 | 7.1:+21247608 | MS.gene065375:CDS |
| ACACTTACCGGAGCCCAGTG+GGG | 0.735878 | 7.1:+21248779 | MS.gene065375:CDS |
| CCAATCATAACAATACGGAG+AGG | 0.738908 | 7.1:-21248755 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTGTTATATTTGTT+AGG | + | chr7.1:21248899-21248918 | MS.gene065375:intron | 10.0% |
| !! | AAAATAACAAAAAAGGATTA+TGG | - | chr7.1:21248139-21248158 | None:intergenic | 15.0% |
| !! | AATTACTAGTATTGTTAAAC+TGG | + | chr7.1:21247011-21247030 | MS.gene065375:intron | 20.0% |
| !! | ACTAAATATATTATGATTGC+AGG | + | chr7.1:21247579-21247598 | MS.gene065375:intron | 20.0% |
| !! | ACTAATAAAATCGAAATTCT+AGG | - | chr7.1:21246331-21246350 | None:intergenic | 20.0% |
| !! | GCTGTTAAAATTTATCATTT+AGG | + | chr7.1:21247883-21247902 | MS.gene065375:intron | 20.0% |
| !! | TGTGATGAAATATTCATATT+TGG | + | chr7.1:21246474-21246493 | MS.gene065375:intron | 20.0% |
| !! | TGTTGAAGATTATTCATATT+TGG | + | chr7.1:21246739-21246758 | MS.gene065375:intron | 20.0% |
| !! | TTTGTAATAAATAGCATTTG+CGG | - | chr7.1:21246912-21246931 | None:intergenic | 20.0% |
| !!! | TGATATATTTGTTCTAAAGT+GGG | + | chr7.1:21248860-21248879 | MS.gene065375:intron | 20.0% |
| !!! | TTTTAGAAAATTCATTCAAG+AGG | + | chr7.1:21247932-21247951 | MS.gene065375:intron | 20.0% |
| ! | AAGAAAACTGCAAAATTCAA+TGG | - | chr7.1:21246384-21246403 | None:intergenic | 25.0% |
| ! | AATAGGAAGATAACTTATGA+TGG | + | chr7.1:21248311-21248330 | MS.gene065375:intron | 25.0% |
| ! | CTAAAGACATTCAAAAGAAT+GGG | - | chr7.1:21247990-21248009 | None:intergenic | 25.0% |
| ! | TAAAGACATTCAAAAGAATG+GGG | - | chr7.1:21247989-21248008 | None:intergenic | 25.0% |
| ! | TAGAAGATATATGAGTAAGT+AGG | - | chr7.1:21248174-21248193 | None:intergenic | 25.0% |
| ! | TCTAAAGACATTCAAAAGAA+TGG | - | chr7.1:21247991-21248010 | None:intergenic | 25.0% |
| ! | TGAATGTTGTTGAATTGTTA+TGG | + | chr7.1:21246205-21246224 | MS.gene065375:intron | 25.0% |
| ! | TGATTGTGATACTGTTATAT+TGG | + | chr7.1:21246237-21246256 | MS.gene065375:intron | 25.0% |
| !! | TTATATCCTTGACAAACTTT+TGG | - | chr7.1:21247961-21247980 | None:intergenic | 25.0% |
| !!! | GCGATTTATGTTTGATTTTA+AGG | + | chr7.1:21246130-21246149 | MS.gene065375:intron | 25.0% |
| !!! | GTGATATATTTGTTCTAAAG+TGG | + | chr7.1:21248859-21248878 | MS.gene065375:intron | 25.0% |
| !!! | GTTTTACATGTCTTATTATC+AGG | - | chr7.1:21248354-21248373 | None:intergenic | 25.0% |
| !!! | TTTGATTTTTGTTGATCTAG+TGG | + | chr7.1:21246415-21246434 | MS.gene065375:intron | 25.0% |
| AAGTACTATTCTGATATTGC+TGG | + | chr7.1:21247275-21247294 | MS.gene065375:CDS | 30.0% | |
| ACAGCAAAAATATCAACAGA+CGG | - | chr7.1:21247868-21247887 | None:intergenic | 30.0% | |
| ATGATTCCTTCATTTCTCTA+CGG | + | chr7.1:21245799-21245818 | MS.gene065375:CDS | 30.0% | |
| CAAAAAAATGATGTGCAAAC+TGG | - | chr7.1:21247759-21247778 | None:intergenic | 30.0% | |
| CAAAATCTCAACAGAGTAAA+GGG | - | chr7.1:21246692-21246711 | None:intergenic | 30.0% | |
| CTCATTGGTATGAATATTGA+TGG | + | chr7.1:21248225-21248244 | MS.gene065375:intron | 30.0% | |
| CTTCAAATGTAGAACTTACA+TGG | - | chr7.1:21247644-21247663 | None:intergenic | 30.0% | |
| GTGTTCCAATCATAACAATA+CGG | - | chr7.1:21248763-21248782 | None:intergenic | 30.0% | |
| TAAAACTCATAAGTAGAAGC+AGG | - | chr7.1:21247917-21247936 | None:intergenic | 30.0% | |
| TAGGATTGGAATTGTTTAGT+TGG | + | chr7.1:21247049-21247068 | MS.gene065375:intron | 30.0% | |
| TCAAAATCTCAACAGAGTAA+AGG | - | chr7.1:21246693-21246712 | None:intergenic | 30.0% | |
| TGAGAAATGATGAAACTCAT+TGG | + | chr7.1:21248210-21248229 | MS.gene065375:intron | 30.0% | |
| TGTCATTATGTGTTACGAAT+AGG | + | chr7.1:21248294-21248313 | MS.gene065375:intron | 30.0% | |
| ! | AGATTCAGCAATTTAAGACT+AGG | - | chr7.1:21246950-21246969 | None:intergenic | 30.0% |
| ! | ATAACTTATGATGGAACCTA+AGG | + | chr7.1:21248320-21248339 | MS.gene065375:intron | 30.0% |
| ! | ATGAAGGAATCATGTTTCTA+CGG | - | chr7.1:21245792-21245811 | None:intergenic | 30.0% |
| ! | CTTATAGATTTGCTCAACAA+TGG | - | chr7.1:21248429-21248448 | None:intergenic | 30.0% |
| ! | GTGATACTGTTATATTGGTT+TGG | + | chr7.1:21246242-21246261 | MS.gene065375:intron | 30.0% |
| ! | TAACTTATGATGGAACCTAA+GGG | + | chr7.1:21248321-21248340 | MS.gene065375:intron | 30.0% |
| ! | TAGATCTGAGAAATGCTTTT+AGG | + | chr7.1:21246176-21246195 | MS.gene065375:intron | 30.0% |
| !! | AGTCTGTTGATATTTTGAGT+AGG | + | chr7.1:21246444-21246463 | MS.gene065375:intron | 30.0% |
| !! | CTTGTTGTATGTTAAGTTGA+AGG | + | chr7.1:21246287-21246306 | MS.gene065375:intron | 30.0% |
| !! | GGTGTTTATTTGATTTGTGA+TGG | + | chr7.1:21246151-21246170 | MS.gene065375:intron | 30.0% |
| !!! | ATTTTGTCGTTTTTAACCAC+AGG | - | chr7.1:21246620-21246639 | None:intergenic | 30.0% |
| AGAAGGAATCATGAATCTAC+CGG | - | chr7.1:21245920-21245939 | None:intergenic | 35.0% | |
| ATCTATGCTAGGAATTAGGA+TGG | + | chr7.1:21247550-21247569 | MS.gene065375:intron | 35.0% | |
| ATGCTTTCAAAGTCTTTGTG+GGG | + | chr7.1:21248810-21248829 | MS.gene065375:CDS | 35.0% | |
| ATTCATGATTCCTTCTCCTA+AGG | + | chr7.1:21245924-21245943 | MS.gene065375:CDS | 35.0% | |
| CAATCATAACAATACGGAGA+GGG | - | chr7.1:21248757-21248776 | None:intergenic | 35.0% | |
| CACTGTAACCAAGTAATGTA+GGG | - | chr7.1:21247214-21247233 | None:intergenic | 35.0% | |
| CTTAGTCAAGTGTAATATGC+AGG | + | chr7.1:21246053-21246072 | MS.gene065375:CDS | 35.0% | |
| CTTGATCTATGCTAGGAATT+AGG | + | chr7.1:21247546-21247565 | MS.gene065375:intron | 35.0% | |
| GATGCTTTCAAAGTCTTTGT+GGG | + | chr7.1:21248809-21248828 | MS.gene065375:CDS | 35.0% | |
| GTTATGATTGGAACACTTAC+CGG | + | chr7.1:21248767-21248786 | MS.gene065375:CDS | 35.0% | |
| TCTATGCTAGGAATTAGGAT+GGG | + | chr7.1:21247551-21247570 | MS.gene065375:intron | 35.0% | |
| TGATGCTTTCAAAGTCTTTG+TGG | + | chr7.1:21248808-21248827 | MS.gene065375:CDS | 35.0% | |
| TGTTAAACTGGTTGTGTTGT+TGG | + | chr7.1:21247023-21247042 | MS.gene065375:intron | 35.0% | |
| TGTTATCTACTGTTTGATGC+AGG | + | chr7.1:21248688-21248707 | MS.gene065375:intron | 35.0% | |
| TTACACTTGACTAAGTCAAG+AGG | - | chr7.1:21246048-21246067 | None:intergenic | 35.0% | |
| ! | AACTTATGATGGAACCTAAG+GGG | + | chr7.1:21248322-21248341 | MS.gene065375:intron | 35.0% |
| ! | ATATTTGTTAGGCCAACAAC+CGG | + | chr7.1:21248910-21248929 | MS.gene065375:intron | 35.0% |
| ! | GCTTTTCTTCTTCGTTTTCT+TGG | + | chr7.1:21246080-21246099 | MS.gene065375:intron | 35.0% |
| ! | GTAGATCAAGGTCTTGTATT+TGG | - | chr7.1:21247315-21247334 | None:intergenic | 35.0% |
| !! | AATTGACTTGAAGTCCAACA+AGG | - | chr7.1:21247830-21247849 | None:intergenic | 35.0% |
| !! | CTTCCGACTTGACAAATTTT+GGG | - | chr7.1:21247454-21247473 | None:intergenic | 35.0% |
| AAAGAGACAAGGTTATCAGC+AGG | - | chr7.1:21248557-21248576 | None:intergenic | 40.0% | |
| AAGCATCATATATTCCCCAC+TGG | - | chr7.1:21248796-21248815 | None:intergenic | 40.0% | |
| AAGTTGAAGGATCGCTTGAT+TGG | + | chr7.1:21246300-21246319 | MS.gene065375:intron | 40.0% | |
| ACTGCAATATCCTTGTTGAC+TGG | + | chr7.1:21247681-21247700 | MS.gene065375:intron | 40.0% | |
| AGCATCATATATTCCCCACT+GGG | - | chr7.1:21248795-21248814 | None:intergenic | 40.0% | |
| AGGAAGCCAAAAGTTTGTCA+AGG | + | chr7.1:21247952-21247971 | MS.gene065375:intron | 40.0% | |
| AGGGCAGCTAGAATAACAAA+AGG | - | chr7.1:21246673-21246692 | None:intergenic | 40.0% | |
| ATCTTGCCAAAAGGTTCCTT+AGG | - | chr7.1:21245943-21245962 | None:intergenic | 40.0% | |
| ATTACTTGGTTACAGTGCAC+AGG | + | chr7.1:21247217-21247236 | MS.gene065375:CDS | 40.0% | |
| CAAAGAATGAGTGCAGCAAA+GGG | + | chr7.1:21248465-21248484 | MS.gene065375:CDS | 40.0% | |
| CCAAAATTTGTCAAGTCGGA+AGG | + | chr7.1:21247452-21247471 | MS.gene065375:CDS | 40.0% | |
| CCAATCATAACAATACGGAG+AGG | - | chr7.1:21248758-21248777 | None:intergenic | 40.0% | |
| CCTCTCCGTATTGTTATGAT+TGG | + | chr7.1:21248755-21248774 | MS.gene065375:CDS | 40.0% | |
| CGTTGTTCAGAAAAGAGACA+AGG | - | chr7.1:21248568-21248587 | None:intergenic | 40.0% | |
| CTCAACAATGGTCTCAAAAG+AGG | - | chr7.1:21248417-21248436 | None:intergenic | 40.0% | |
| GAAGAACCGTAGAGAAATGA+AGG | - | chr7.1:21245808-21245827 | None:intergenic | 40.0% | |
| GCACTGTAACCAAGTAATGT+AGG | - | chr7.1:21247215-21247234 | None:intergenic | 40.0% | |
| GCTCCCAAAATTTGTCAAGT+CGG | + | chr7.1:21247448-21247467 | MS.gene065375:CDS | 40.0% | |
| TACATCTCGATCTTGCCAAA+AGG | - | chr7.1:21245952-21245971 | None:intergenic | 40.0% | |
| TAGTTATGAAACACAGCCAC+CGG | + | chr7.1:21246566-21246585 | MS.gene065375:intron | 40.0% | |
| TATGATTGCAGGCTGTACAA+GGG | + | chr7.1:21247590-21247609 | MS.gene065375:intron | 40.0% | |
| TCCAACAAGGTAGTGTAACA+TGG | - | chr7.1:21247817-21247836 | None:intergenic | 40.0% | |
| TCCTTTGCAATCTCTGCAAT+GGG | - | chr7.1:21248952-21248971 | None:intergenic | 40.0% | |
| TGATGAGATGCTCTTGTACT+TGG | - | chr7.1:21247135-21247154 | None:intergenic | 40.0% | |
| TGCACTCATTCTTTGGTTGT+GGG | - | chr7.1:21248460-21248479 | None:intergenic | 40.0% | |
| TGTTGCTCTTGATCTATGCT+AGG | + | chr7.1:21247539-21247558 | MS.gene065375:intron | 40.0% | |
| TTACTTGGTTACAGTGCACA+GGG | + | chr7.1:21247218-21247237 | MS.gene065375:CDS | 40.0% | |
| TTATCAGGTTTCAACCCCTT+AGG | - | chr7.1:21248339-21248358 | None:intergenic | 40.0% | |
| TTATGATTGCAGGCTGTACA+AGG | + | chr7.1:21247589-21247608 | MS.gene065375:intron | 40.0% | |
| TTCCTTTGCAATCTCTGCAA+TGG | - | chr7.1:21248953-21248972 | None:intergenic | 40.0% | |
| TTGTATTTGGCTGCATACTC+CGG | - | chr7.1:21247302-21247321 | None:intergenic | 40.0% | |
| ! | CTTCTTCGTTTTCTTGGATC+TGG | + | chr7.1:21246086-21246105 | MS.gene065375:intron | 40.0% |
| ! | TCTTTTCTGAACAACGCCAA+AGG | + | chr7.1:21248572-21248591 | MS.gene065375:CDS | 40.0% |
| ! | TTCAAAGTGTCCAGTCAACA+AGG | - | chr7.1:21247694-21247713 | None:intergenic | 40.0% |
| !! | AAGTACAAGAGCATCTCATC+AGG | + | chr7.1:21247134-21247153 | MS.gene065375:CDS | 40.0% |
| !! | AGTACAAGAGCATCTCATCA+GGG | + | chr7.1:21247135-21247154 | MS.gene065375:CDS | 40.0% |
| !! | CCTTCCGACTTGACAAATTT+TGG | - | chr7.1:21247455-21247474 | None:intergenic | 40.0% |
| !! | TGTGTTGTTGGTGTTAGGAT+TGG | + | chr7.1:21247035-21247054 | MS.gene065375:intron | 40.0% |
| !!! | AGGGTTTGGAGTTTTGTTCA+AGG | + | chr7.1:21247154-21247173 | MS.gene065375:CDS | 40.0% |
| AAGACCTTGATCTACCTTGC+TGG | + | chr7.1:21247320-21247339 | MS.gene065375:CDS | 45.0% | |
| ACCAAGACCTCTTGCAAAAC+CGG | - | chr7.1:21247423-21247442 | None:intergenic | 45.0% | |
| AGATGCTCTTGTACTTGGCA+GGG | - | chr7.1:21247130-21247149 | None:intergenic | 45.0% | |
| ATCACCAACTGTTGCTCCTT+TGG | - | chr7.1:21248591-21248610 | None:intergenic | 45.0% | |
| ATTCACCAGATCGTCAGTTC+CGG | + | chr7.1:21245847-21245866 | MS.gene065375:CDS | 45.0% | |
| CATTGACACATCAACACCTG+TGG | + | chr7.1:21246601-21246620 | MS.gene065375:intron | 45.0% | |
| CCAAAAGGTTCCTTAGGAGA+AGG | - | chr7.1:21245937-21245956 | None:intergenic | 45.0% | |
| CCAAAGAATGAGTGCAGCAA+AGG | + | chr7.1:21248464-21248483 | MS.gene065375:CDS | 45.0% | |
| CCTTTGCTGCACTCATTCTT+TGG | - | chr7.1:21248467-21248486 | None:intergenic | 45.0% | |
| CTATTCTGATATTGCTGGCC+CGG | + | chr7.1:21247280-21247299 | MS.gene065375:CDS | 45.0% | |
| CTCATTCTTTGGTTGTGGGA+TGG | - | chr7.1:21248456-21248475 | None:intergenic | 45.0% | |
| CTGACGATCTGGTGAATAAC+CGG | - | chr7.1:21245844-21245863 | None:intergenic | 45.0% | |
| CTGCACTCATTCTTTGGTTG+TGG | - | chr7.1:21248461-21248480 | None:intergenic | 45.0% | |
| GATCTGGTGAATAACCGGTA+GGG | - | chr7.1:21245839-21245858 | None:intergenic | 45.0% | |
| GCCATGTTACACTACCTTGT+TGG | + | chr7.1:21247813-21247832 | MS.gene065375:intron | 45.0% | |
| GGACTTTAACAGCCTCGAAT+GGG | - | chr7.1:21247385-21247404 | None:intergenic | 45.0% | |
| GTACAAGCAGCATAGAAAGC+AGG | - | chr7.1:21245979-21245998 | None:intergenic | 45.0% | |
| GTTACTTCCGTTACCATCTG+AGG | + | chr7.1:21247729-21247748 | MS.gene065375:intron | 45.0% | |
| TCCCATTGCAGAGATTGCAA+AGG | + | chr7.1:21248948-21248967 | MS.gene065375:CDS | 45.0% | |
| TGAACCAGCAAGGTAGATCA+AGG | - | chr7.1:21247327-21247346 | None:intergenic | 45.0% | |
| TGGAATGCCTCAGATGGTAA+CGG | - | chr7.1:21247739-21247758 | None:intergenic | 45.0% | |
| TGTATTTGGCTGCATACTCC+GGG | - | chr7.1:21247301-21247320 | None:intergenic | 45.0% | |
| TTCAAGGAGCAGGGAGTTAA+GGG | + | chr7.1:21247170-21247189 | MS.gene065375:CDS | 45.0% | |
| TTCTTCCACCAAAACCCTAC+CGG | + | chr7.1:21245822-21245841 | MS.gene065375:CDS | 45.0% | |
| TTTGCAAGAGGTCTTGGTGA+TGG | + | chr7.1:21247425-21247444 | MS.gene065375:CDS | 45.0% | |
| ! | AAGGGATTAGTGCCTCTATG+GGG | + | chr7.1:21247608-21247627 | MS.gene065375:CDS | 45.0% |
| ! | ACAAGGGATTAGTGCCTCTA+TGG | + | chr7.1:21247606-21247625 | MS.gene065375:CDS | 45.0% |
| ! | CAAGGGATTAGTGCCTCTAT+GGG | + | chr7.1:21247607-21247626 | MS.gene065375:CDS | 45.0% |
| ! | CACAGGGTGCTTGCAAATTT+GGG | + | chr7.1:21247234-21247253 | MS.gene065375:CDS | 45.0% |
| ! | CCTTCTCCTAAGGAACCTTT+TGG | + | chr7.1:21245934-21245953 | MS.gene065375:CDS | 45.0% |
| ! | CTGGTTGTGTTGTTGGTGTT+AGG | + | chr7.1:21247030-21247049 | MS.gene065375:intron | 45.0% |
| ! | GTGAATAACCGGTAGGGTTT+TGG | - | chr7.1:21245833-21245852 | None:intergenic | 45.0% |
| ! | TTCTATGCTGCTTGTACTGC+TGG | + | chr7.1:21245982-21246001 | MS.gene065375:CDS | 45.0% |
| ! | TTGCAAGAGGTCTTGGTGAT+GGG | + | chr7.1:21247426-21247445 | MS.gene065375:CDS | 45.0% |
| ! | TTTGCTGGTGGATACATTGC+TGG | + | chr7.1:21248506-21248525 | MS.gene065375:CDS | 45.0% |
| !! | AAGAGCATCTCATCAGGGTT+TGG | + | chr7.1:21247140-21247159 | MS.gene065375:CDS | 45.0% |
| !! | AATAACCGGTAGGGTTTTGG+TGG | - | chr7.1:21245830-21245849 | None:intergenic | 45.0% |
| !!! | CAACTTGGTGTCAGTTTTGC+TGG | + | chr7.1:21248491-21248510 | MS.gene065375:CDS | 45.0% |
| !!! | GGAGTTTTGTTCAAGGAGCA+GGG | + | chr7.1:21247161-21247180 | MS.gene065375:CDS | 45.0% |
| !!! | TGGAGTTTTGTTCAAGGAGC+AGG | + | chr7.1:21247160-21247179 | MS.gene065375:CDS | 45.0% |
| !! | AAAAAAAAAAATAACAAAAA+AGG | - | chr7.1:21248146-21248165 | None:intergenic | 5.0% |
| !! | AATATAACAAAAAATTTATT+AGG | - | chr7.1:21248895-21248914 | None:intergenic | 5.0% |
| AACCGGGCTGAGTTTGAACA+CGG | - | chr7.1:21247406-21247425 | None:intergenic | 50.0% | |
| AACGCCAAAGGAGCAACAGT+TGG | + | chr7.1:21248584-21248603 | MS.gene065375:CDS | 50.0% | |
| ATATATTCCCCACTGGGCTC+CGG | - | chr7.1:21248789-21248808 | None:intergenic | 50.0% | |
| ATCTACCGGATCCAGTTCCA+CGG | - | chr7.1:21245906-21245925 | None:intergenic | 50.0% | |
| ATGCAGGCTGTTGCGAAGTT+TGG | + | chr7.1:21248704-21248723 | MS.gene065375:intron | 50.0% | |
| CCAAGACCTCTTGCAAAACC+GGG | - | chr7.1:21247422-21247441 | None:intergenic | 50.0% | |
| CGATCTGGTGAATAACCGGT+AGG | - | chr7.1:21245840-21245859 | None:intergenic | 50.0% | |
| CGGACTTTAACAGCCTCGAA+TGG | - | chr7.1:21247386-21247405 | None:intergenic | 50.0% | |
| GAGATGCTCTTGTACTTGGC+AGG | - | chr7.1:21247131-21247150 | None:intergenic | 50.0% | |
| GATTAGTGCCTCTATGGGGA+AGG | + | chr7.1:21247612-21247631 | MS.gene065375:CDS | 50.0% | |
| GCAAACTGGAATGCCTCAGA+TGG | - | chr7.1:21247745-21247764 | None:intergenic | 50.0% | |
| GCTGGTGGAATTCTTAGCTG+TGG | + | chr7.1:21246000-21246019 | MS.gene065375:CDS | 50.0% | |
| GGATGGGTCCCTACATTACT+TGG | + | chr7.1:21247203-21247222 | MS.gene065375:CDS | 50.0% | |
| GTCAAGTCGGAAGGAGCTTT+GGG | + | chr7.1:21247461-21247480 | MS.gene065375:CDS | 50.0% | |
| GTTCAAGGAGCAGGGAGTTA+AGG | + | chr7.1:21247169-21247188 | MS.gene065375:CDS | 50.0% | |
| TCAAGTCGGAAGGAGCTTTG+GGG | + | chr7.1:21247462-21247481 | MS.gene065375:CDS | 50.0% | |
| TGTCAAGTCGGAAGGAGCTT+TGG | + | chr7.1:21247460-21247479 | MS.gene065375:CDS | 50.0% | |
| TTTGTTAGGCCAACAACCGG+TGG | + | chr7.1:21248913-21248932 | MS.gene065375:intron | 50.0% | |
| ! | GCACAGGGTGCTTGCAAATT+TGG | + | chr7.1:21247233-21247252 | MS.gene065375:CDS | 50.0% |
| ! | TATGCTGCTTGTACTGCTGG+TGG | + | chr7.1:21245985-21246004 | MS.gene065375:CDS | 50.0% |
| !! | GGAGTTAAGGGCTTTTTCCG+CGG | + | chr7.1:21247182-21247201 | MS.gene065375:CDS | 50.0% |
| !! | GTTGCGAAGTTTGGTGTGGT+TGG | + | chr7.1:21248713-21248732 | MS.gene065375:CDS | 50.0% |
| !! | TAAGGGCTTTTTCCGCGGAT+GGG | + | chr7.1:21247187-21247206 | MS.gene065375:CDS | 50.0% |
| !! | TTAAGGGCTTTTTCCGCGGA+TGG | + | chr7.1:21247186-21247205 | MS.gene065375:CDS | 50.0% |
| !!! | CTTGGTGTCAGTTTTGCTGG+TGG | + | chr7.1:21248494-21248513 | MS.gene065375:CDS | 50.0% |
| AACACTTACCGGAGCCCAGT+GGG | + | chr7.1:21248778-21248797 | MS.gene065375:CDS | 55.0% | |
| AATACGGAGAGGGAGACCTC+TGG | - | chr7.1:21248747-21248766 | None:intergenic | 55.0% | |
| CAGCAGATGCTGAACCAGCA+AGG | - | chr7.1:21247337-21247356 | None:intergenic | 55.0% | |
| CGTTGCACTTTGCCCATTCG+AGG | + | chr7.1:21247370-21247389 | MS.gene065375:CDS | 55.0% | |
| GATCCAGTTCCACGGAGTGA+AGG | - | chr7.1:21245898-21245917 | None:intergenic | 55.0% | |
| GCAATCTCTGCAATGGGAGC+AGG | - | chr7.1:21248946-21248965 | None:intergenic | 55.0% | |
| GGAATCTGCCTTCCCCATAG+AGG | - | chr7.1:21247623-21247642 | None:intergenic | 55.0% | |
| GTAATGTAGGGACCCATCCG+CGG | - | chr7.1:21247202-21247221 | None:intergenic | 55.0% | |
| GTCAATGACCGTGTCGTGAC+CGG | - | chr7.1:21246588-21246607 | None:intergenic | 55.0% | |
| GTCCGTGTTCAAACTCAGCC+CGG | + | chr7.1:21247401-21247420 | MS.gene065375:CDS | 55.0% | |
| TCACTCCGTGGAACTGGATC+CGG | + | chr7.1:21245898-21245917 | MS.gene065375:CDS | 55.0% | |
| TGCAGCAAAGGGCTGCAACT+TGG | + | chr7.1:21248476-21248495 | MS.gene065375:CDS | 55.0% | |
| ! | ACTCAGCCCGGTTTTGCAAG+AGG | + | chr7.1:21247413-21247432 | MS.gene065375:CDS | 55.0% |
| ! | CCCGGTTTTGCAAGAGGTCT+TGG | + | chr7.1:21247419-21247438 | MS.gene065375:CDS | 55.0% |
| ! | GGCTGTTGCGAAGTTTGGTG+TGG | + | chr7.1:21248709-21248728 | MS.gene065375:intron | 55.0% |
| !! | GTGGTTGGTCTCTTCACCAG+AGG | + | chr7.1:21248728-21248747 | MS.gene065375:CDS | 55.0% |
| !! | TGCTGGTTCAGCATCTGCTG+AGG | + | chr7.1:21247337-21247356 | MS.gene065375:CDS | 55.0% |
| AATGACCGTGTCGTGACCGG+TGG | - | chr7.1:21246585-21246604 | None:intergenic | 60.0% | |
| ACACTTACCGGAGCCCAGTG+GGG | + | chr7.1:21248779-21248798 | MS.gene065375:CDS | 60.0% | |
| CCAGTTCCACGGAGTGAAGG+CGG | - | chr7.1:21245895-21245914 | None:intergenic | 60.0% | |
| GAACACTTACCGGAGCCCAG+TGG | + | chr7.1:21248777-21248796 | MS.gene065375:CDS | 60.0% | |
| CACAGCCACCGGTCACGACA+CGG | + | chr7.1:21246577-21246596 | MS.gene065375:intron | 65.0% | |
| CCGCCTTCACTCCGTGGAAC+TGG | + | chr7.1:21245892-21245911 | MS.gene065375:CDS | 65.0% | |
| CGGGACCGGAACTGACGATC+TGG | - | chr7.1:21245855-21245874 | None:intergenic | 65.0% | |
| ! | GGAGCAGCACCACCGGTTGT+TGG | - | chr7.1:21248925-21248944 | None:intergenic | 65.0% |
| GGGAGCAGGAGCAGCACCAC+CGG | - | chr7.1:21248932-21248951 | None:intergenic | 70.0% | |
| TCCACGGAGTGAAGGCGGCG+CGG | - | chr7.1:21245890-21245909 | None:intergenic | 70.0% | |
| ACGGAGTGAAGGCGGCGCGG+CGG | - | chr7.1:21245887-21245906 | None:intergenic | 75.0% | |
| ! | GAGTGAAGGCGGCGCGGCGG+CGG | - | chr7.1:21245884-21245903 | None:intergenic | 80.0% |
| ! | GCCGCGCCGCCTTCACTCCG+TGG | + | chr7.1:21245886-21245905 | MS.gene065375:CDS | 80.0% |
| ! | GGCGGCGGAAGGAGCGGGAC+CGG | - | chr7.1:21245869-21245888 | None:intergenic | 80.0% |
| ! | CGGCGCGGCGGCGGAAGGAG+CGG | - | chr7.1:21245875-21245894 | None:intergenic | 85.0% |
| ! | GAAGGCGGCGCGGCGGCGGA+AGG | - | chr7.1:21245880-21245899 | None:intergenic | 85.0% |
| ! | GGCGCGGCGGCGGAAGGAGC+GGG | - | chr7.1:21245874-21245893 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 21245763 | 21248975 | 21245763 | ID=MS.gene065375 |
| chr7.1 | mRNA | 21245763 | 21248975 | 21245763 | ID=MS.gene065375.t1;Parent=MS.gene065375 |
| chr7.1 | exon | 21245763 | 21246074 | 21245763 | ID=MS.gene065375.t1.exon1;Parent=MS.gene065375.t1 |
| chr7.1 | CDS | 21245763 | 21246074 | 21245763 | ID=cds.MS.gene065375.t1;Parent=MS.gene065375.t1 |
| chr7.1 | exon | 21247122 | 21247483 | 21247122 | ID=MS.gene065375.t1.exon2;Parent=MS.gene065375.t1 |
| chr7.1 | CDS | 21247122 | 21247483 | 21247122 | ID=cds.MS.gene065375.t1;Parent=MS.gene065375.t1 |
| chr7.1 | exon | 21247601 | 21247644 | 21247601 | ID=MS.gene065375.t1.exon3;Parent=MS.gene065375.t1 |
| chr7.1 | CDS | 21247601 | 21247644 | 21247601 | ID=cds.MS.gene065375.t1;Parent=MS.gene065375.t1 |
| chr7.1 | exon | 21248396 | 21248610 | 21248396 | ID=MS.gene065375.t1.exon4;Parent=MS.gene065375.t1 |
| chr7.1 | CDS | 21248396 | 21248610 | 21248396 | ID=cds.MS.gene065375.t1;Parent=MS.gene065375.t1 |
| chr7.1 | exon | 21248710 | 21248834 | 21248710 | ID=MS.gene065375.t1.exon5;Parent=MS.gene065375.t1 |
| chr7.1 | CDS | 21248710 | 21248834 | 21248710 | ID=cds.MS.gene065375.t1;Parent=MS.gene065375.t1 |
| chr7.1 | exon | 21248921 | 21248975 | 21248921 | ID=MS.gene065375.t1.exon6;Parent=MS.gene065375.t1 |
| chr7.1 | CDS | 21248921 | 21248975 | 21248921 | ID=cds.MS.gene065375.t1;Parent=MS.gene065375.t1 |
| Gene Sequence |
| Protein sequence |
