Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065640.t1 | AES60637.1 | 93.1 | 363 | 8 | 3 | 1 | 347 | 1 | 362 | 1.10E-178 | 636 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065640.t1 | Q8VYJ2 | 42.4 | 297 | 118 | 8 | 68 | 344 | 92 | 355 | 2.6e-45 | 184.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065640.t1 | G7I9B1 | 93.1 | 363 | 8 | 3 | 1 | 347 | 1 | 362 | 7.6e-179 | 636.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049596 | MS.gene065640 | 0.804087 | 2.56E-49 | -1.69E-46 |
MS.gene050297 | MS.gene065640 | 0.80354 | 3.32E-49 | -1.69E-46 |
MS.gene05124 | MS.gene065640 | 0.805043 | 1.62E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065640.t1 | MTR_1g061530 | 93.113 | 363 | 8 | 3 | 1 | 347 | 1 | 362 | 0.0 | 667 |
MS.gene065640.t1 | MTR_7g074935 | 42.683 | 328 | 135 | 10 | 43 | 346 | 35 | 333 | 2.91e-56 | 186 |
MS.gene065640.t1 | MTR_8g036160 | 40.625 | 320 | 128 | 8 | 60 | 346 | 66 | 356 | 5.32e-47 | 163 |
MS.gene065640.t1 | MTR_8g031100 | 47.887 | 213 | 85 | 4 | 65 | 262 | 89 | 290 | 3.36e-45 | 158 |
MS.gene065640.t1 | MTR_1g076710 | 40.193 | 311 | 129 | 11 | 65 | 337 | 49 | 340 | 1.88e-44 | 155 |
MS.gene065640.t1 | MTR_4g101990 | 47.826 | 230 | 96 | 6 | 54 | 265 | 61 | 284 | 5.12e-44 | 154 |
MS.gene065640.t1 | MTR_5g010330 | 44.175 | 206 | 86 | 4 | 65 | 255 | 70 | 261 | 8.42e-41 | 145 |
MS.gene065640.t1 | MTR_8g098390 | 44.221 | 199 | 101 | 3 | 65 | 255 | 97 | 293 | 1.58e-40 | 145 |
MS.gene065640.t1 | MTR_5g011680 | 37.959 | 245 | 112 | 4 | 64 | 269 | 45 | 288 | 3.28e-38 | 138 |
MS.gene065640.t1 | MTR_4g098460 | 46.893 | 177 | 74 | 4 | 126 | 289 | 81 | 250 | 1.66e-37 | 136 |
MS.gene065640.t1 | MTR_7g077120 | 40.722 | 194 | 91 | 3 | 65 | 243 | 89 | 273 | 1.50e-36 | 135 |
MS.gene065640.t1 | MTR_6g061670 | 39.453 | 256 | 111 | 8 | 65 | 295 | 51 | 287 | 8.82e-36 | 132 |
MS.gene065640.t1 | MTR_4g098460 | 45.604 | 182 | 74 | 5 | 126 | 289 | 81 | 255 | 3.22e-35 | 130 |
MS.gene065640.t1 | MTR_6g061670 | 39.062 | 256 | 117 | 7 | 65 | 295 | 51 | 292 | 3.53e-35 | 130 |
MS.gene065640.t1 | MTR_4g055833 | 40.807 | 223 | 104 | 8 | 65 | 274 | 57 | 264 | 2.76e-33 | 126 |
MS.gene065640.t1 | MTR_5g011620 | 37.156 | 218 | 117 | 5 | 64 | 270 | 45 | 253 | 7.78e-33 | 129 |
MS.gene065640.t1 | MTR_4g055803 | 41.463 | 205 | 98 | 7 | 65 | 256 | 60 | 255 | 2.31e-32 | 125 |
MS.gene065640.t1 | MTR_1g079780 | 41.089 | 202 | 107 | 6 | 49 | 242 | 25 | 222 | 9.68e-32 | 122 |
MS.gene065640.t1 | MTR_4g055813 | 50.735 | 136 | 61 | 4 | 121 | 255 | 14 | 144 | 1.21e-30 | 118 |
MS.gene065640.t1 | MTR_5g011610 | 42.667 | 150 | 78 | 3 | 123 | 270 | 53 | 196 | 1.46e-30 | 119 |
MS.gene065640.t1 | MTR_5g011610 | 41.905 | 105 | 57 | 2 | 115 | 219 | 201 | 301 | 2.00e-17 | 82.4 |
MS.gene065640.t1 | MTR_1g038960 | 36.255 | 251 | 117 | 8 | 12 | 248 | 48 | 269 | 8.02e-29 | 114 |
MS.gene065640.t1 | MTR_7g116320 | 54.098 | 122 | 52 | 2 | 122 | 243 | 139 | 256 | 1.31e-27 | 111 |
MS.gene065640.t1 | MTR_7g116320 | 53.390 | 118 | 51 | 2 | 122 | 239 | 139 | 252 | 4.58e-26 | 105 |
MS.gene065640.t1 | MTR_5g014360 | 35.714 | 196 | 94 | 5 | 66 | 242 | 121 | 303 | 1.92e-25 | 105 |
MS.gene065640.t1 | MTR_3g023560 | 40.441 | 136 | 74 | 2 | 125 | 257 | 61 | 192 | 6.42e-24 | 99.4 |
MS.gene065640.t1 | MTR_1g038990 | 40.000 | 185 | 93 | 7 | 65 | 248 | 82 | 249 | 1.36e-23 | 99.8 |
MS.gene065640.t1 | MTR_4g055705 | 30.662 | 287 | 154 | 8 | 33 | 291 | 24 | 293 | 1.39e-22 | 96.7 |
MS.gene065640.t1 | MTR_5g013390 | 36.715 | 207 | 112 | 7 | 49 | 246 | 69 | 265 | 1.34e-21 | 94.4 |
MS.gene065640.t1 | MTR_3g100470 | 34.109 | 129 | 85 | 0 | 126 | 254 | 101 | 229 | 1.49e-20 | 90.5 |
MS.gene065640.t1 | MTR_5g041430 | 35.979 | 189 | 96 | 6 | 65 | 241 | 50 | 225 | 3.97e-20 | 89.7 |
MS.gene065640.t1 | MTR_5g066020 | 33.846 | 130 | 83 | 2 | 126 | 254 | 80 | 207 | 1.87e-19 | 86.7 |
MS.gene065640.t1 | MTR_6g060670 | 38.172 | 186 | 91 | 9 | 65 | 243 | 120 | 288 | 7.69e-19 | 85.9 |
MS.gene065640.t1 | MTR_5g011700 | 44.860 | 107 | 54 | 2 | 137 | 242 | 10 | 112 | 8.34e-18 | 80.9 |
MS.gene065640.t1 | MTR_3g068035 | 40.800 | 125 | 70 | 2 | 129 | 253 | 109 | 229 | 1.39e-17 | 82.4 |
MS.gene065640.t1 | MTR_3g116100 | 40.152 | 132 | 72 | 3 | 111 | 242 | 130 | 254 | 1.52e-17 | 82.8 |
MS.gene065640.t1 | MTR_5g011520 | 41.600 | 125 | 69 | 2 | 129 | 253 | 130 | 250 | 5.47e-16 | 78.2 |
MS.gene065640.t1 | MTR_4g098450 | 39.259 | 135 | 78 | 2 | 129 | 263 | 106 | 236 | 1.93e-15 | 76.3 |
MS.gene065640.t1 | MTR_5g091630 | 44.444 | 126 | 64 | 3 | 129 | 253 | 77 | 197 | 4.48e-15 | 74.3 |
MS.gene065640.t1 | MTR_8g036060 | 41.600 | 125 | 69 | 2 | 129 | 253 | 116 | 236 | 5.68e-15 | 75.1 |
MS.gene065640.t1 | MTR_7g080980 | 36.000 | 175 | 102 | 4 | 129 | 299 | 87 | 255 | 1.52e-14 | 73.2 |
MS.gene065640.t1 | MTR_1g044155 | 39.516 | 124 | 71 | 2 | 129 | 252 | 156 | 275 | 2.05e-14 | 73.9 |
MS.gene065640.t1 | MTR_1g073860 | 38.710 | 124 | 72 | 2 | 129 | 252 | 124 | 243 | 1.16e-13 | 71.2 |
MS.gene065640.t1 | MTR_1g079810 | 44.348 | 115 | 58 | 3 | 129 | 242 | 104 | 213 | 1.08e-12 | 68.2 |
MS.gene065640.t1 | MTR_5g080580 | 38.261 | 115 | 67 | 2 | 130 | 244 | 120 | 230 | 8.78e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065640.t1 | AT4G12080 | 48.971 | 243 | 91 | 7 | 65 | 285 | 89 | 320 | 8.39e-61 | 199 |
MS.gene065640.t1 | AT4G25320 | 43.983 | 241 | 97 | 6 | 65 | 277 | 86 | 316 | 4.24e-52 | 177 |
MS.gene065640.t1 | AT5G62260 | 43.578 | 218 | 91 | 3 | 65 | 255 | 76 | 288 | 2.99e-51 | 175 |
MS.gene065640.t1 | AT5G62260 | 43.578 | 218 | 91 | 3 | 65 | 255 | 76 | 288 | 2.99e-51 | 175 |
MS.gene065640.t1 | AT2G33620 | 51.282 | 195 | 73 | 6 | 65 | 246 | 97 | 282 | 2.80e-49 | 169 |
MS.gene065640.t1 | AT2G33620 | 51.282 | 195 | 73 | 6 | 65 | 246 | 97 | 282 | 2.80e-49 | 169 |
MS.gene065640.t1 | AT2G33620 | 51.282 | 195 | 73 | 6 | 65 | 246 | 97 | 282 | 2.80e-49 | 169 |
MS.gene065640.t1 | AT2G33620 | 51.282 | 195 | 73 | 6 | 65 | 246 | 97 | 282 | 2.80e-49 | 169 |
MS.gene065640.t1 | AT2G45850 | 46.890 | 209 | 91 | 5 | 65 | 262 | 98 | 297 | 4.76e-49 | 168 |
MS.gene065640.t1 | AT2G45850 | 46.890 | 209 | 91 | 5 | 65 | 262 | 98 | 297 | 4.76e-49 | 168 |
MS.gene065640.t1 | AT5G62260 | 44.500 | 200 | 79 | 3 | 65 | 237 | 76 | 270 | 3.73e-48 | 164 |
MS.gene065640.t1 | AT4G22770 | 46.875 | 224 | 88 | 5 | 65 | 265 | 72 | 287 | 2.22e-47 | 163 |
MS.gene065640.t1 | AT4G22770 | 46.875 | 224 | 88 | 5 | 65 | 265 | 72 | 287 | 2.22e-47 | 163 |
MS.gene065640.t1 | AT4G00200 | 48.163 | 245 | 88 | 6 | 39 | 264 | 36 | 260 | 7.37e-47 | 161 |
MS.gene065640.t1 | AT4G00200 | 48.163 | 245 | 88 | 6 | 39 | 264 | 36 | 260 | 7.37e-47 | 161 |
MS.gene065640.t1 | AT5G51590 | 42.982 | 228 | 72 | 5 | 65 | 244 | 78 | 295 | 5.61e-45 | 159 |
MS.gene065640.t1 | AT2G45850 | 48.148 | 189 | 78 | 5 | 65 | 242 | 98 | 277 | 6.68e-44 | 152 |
MS.gene065640.t1 | AT1G63470 | 44.724 | 199 | 79 | 5 | 65 | 243 | 105 | 292 | 2.31e-41 | 149 |
MS.gene065640.t1 | AT1G63480 | 42.857 | 203 | 100 | 5 | 65 | 257 | 93 | 289 | 4.72e-40 | 144 |
MS.gene065640.t1 | AT1G63480 | 42.857 | 203 | 100 | 5 | 65 | 257 | 93 | 289 | 4.72e-40 | 144 |
MS.gene065640.t1 | AT1G63480 | 42.857 | 203 | 100 | 5 | 65 | 257 | 93 | 289 | 4.72e-40 | 144 |
MS.gene065640.t1 | AT1G63480 | 42.857 | 203 | 100 | 5 | 65 | 257 | 93 | 289 | 4.72e-40 | 144 |
MS.gene065640.t1 | AT1G63480 | 42.857 | 203 | 100 | 5 | 65 | 257 | 93 | 289 | 4.72e-40 | 144 |
MS.gene065640.t1 | AT1G63480 | 42.857 | 203 | 100 | 5 | 65 | 257 | 99 | 295 | 5.41e-40 | 144 |
MS.gene065640.t1 | AT1G63480 | 42.857 | 203 | 100 | 5 | 65 | 257 | 99 | 295 | 5.41e-40 | 144 |
MS.gene065640.t1 | AT3G61310 | 44.878 | 205 | 94 | 5 | 65 | 259 | 101 | 296 | 3.36e-39 | 142 |
MS.gene065640.t1 | AT4G17950 | 39.914 | 233 | 107 | 5 | 65 | 267 | 131 | 360 | 4.98e-39 | 144 |
MS.gene065640.t1 | AT3G04590 | 45.109 | 184 | 90 | 4 | 65 | 242 | 105 | 283 | 6.32e-36 | 132 |
MS.gene065640.t1 | AT3G04590 | 45.109 | 184 | 90 | 4 | 65 | 242 | 105 | 283 | 6.29e-35 | 132 |
MS.gene065640.t1 | AT5G46640 | 41.827 | 208 | 93 | 4 | 65 | 250 | 102 | 303 | 1.74e-33 | 127 |
MS.gene065640.t1 | AT2G36560 | 32.836 | 268 | 142 | 10 | 66 | 328 | 61 | 295 | 1.10e-27 | 114 |
MS.gene065640.t1 | AT3G60870 | 41.026 | 117 | 63 | 2 | 126 | 242 | 86 | 196 | 2.18e-20 | 89.7 |
MS.gene065640.t1 | AT2G45430 | 41.727 | 139 | 75 | 2 | 129 | 264 | 119 | 254 | 2.91e-18 | 84.7 |
MS.gene065640.t1 | AT1G14490 | 34.559 | 136 | 86 | 2 | 126 | 258 | 49 | 184 | 9.90e-18 | 81.6 |
MS.gene065640.t1 | AT1G14490 | 34.815 | 135 | 85 | 2 | 127 | 258 | 31 | 165 | 1.90e-17 | 80.1 |
MS.gene065640.t1 | AT4G12050 | 40.000 | 125 | 72 | 1 | 129 | 253 | 148 | 269 | 4.74e-17 | 81.3 |
MS.gene065640.t1 | AT5G49700 | 36.585 | 123 | 69 | 3 | 126 | 242 | 83 | 202 | 7.51e-17 | 80.1 |
MS.gene065640.t1 | AT2G42940 | 43.966 | 116 | 59 | 3 | 129 | 243 | 83 | 193 | 9.53e-16 | 76.6 |
MS.gene065640.t1 | AT1G76500 | 34.586 | 133 | 76 | 2 | 129 | 253 | 102 | 231 | 3.38e-15 | 75.5 |
MS.gene065640.t1 | AT4G22810 | 39.370 | 127 | 72 | 2 | 129 | 253 | 135 | 258 | 3.79e-15 | 75.9 |
MS.gene065640.t1 | AT5G28590 | 37.241 | 145 | 64 | 3 | 99 | 242 | 3 | 121 | 8.03e-15 | 73.2 |
MS.gene065640.t1 | AT2G35270 | 37.594 | 133 | 79 | 2 | 129 | 261 | 108 | 236 | 3.53e-13 | 69.3 |
MS.gene065640.t1 | AT3G55560 | 38.793 | 116 | 68 | 2 | 129 | 244 | 118 | 230 | 4.77e-13 | 69.3 |
MS.gene065640.t1 | AT4G35390 | 38.261 | 115 | 67 | 2 | 129 | 242 | 93 | 204 | 7.92e-13 | 68.6 |
MS.gene065640.t1 | AT4G17800 | 38.889 | 126 | 73 | 2 | 129 | 254 | 112 | 233 | 1.42e-12 | 67.8 |
MS.gene065640.t1 | AT3G04570 | 39.695 | 131 | 69 | 2 | 129 | 252 | 110 | 237 | 2.86e-12 | 67.0 |
MS.gene065640.t1 | AT4G14465 | 35.433 | 127 | 78 | 2 | 129 | 255 | 97 | 219 | 1.78e-11 | 64.3 |
Find 74 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTGCTGCTGTGACTATTTC+TGG | 0.182840 | 1.4:+50715944 | None:intergenic |
TCTTCTTGTAACTTGGATTT+AGG | 0.193712 | 1.4:+50718796 | None:intergenic |
AACAACAACACCAGGAAGTT+TGG | 0.299197 | 1.4:-50718874 | MS.gene065640:CDS |
AACAGTATTGTAACTACTAT+TGG | 0.316379 | 1.4:-50718936 | MS.gene065640:CDS |
ACAACAACAAGCCTCTTAAA+AGG | 0.320963 | 1.4:-50716012 | MS.gene065640:CDS |
TGAATATTTGCTTGTGAGAT+AGG | 0.357972 | 1.4:+50715920 | None:intergenic |
CCAGGAAGTTTGGATTTGTT+TGG | 0.373812 | 1.4:-50718864 | MS.gene065640:CDS |
CCAAACAAATCCAAACTTCC+TGG | 0.377742 | 1.4:+50718864 | None:intergenic |
AAGAAAATATCATACTTGTA+TGG | 0.383243 | 1.4:+50716946 | None:intergenic |
GGAAGCTGATGAGACATAAT+AGG | 0.397317 | 1.4:+50715878 | None:intergenic |
ATCTCACAAGCAAATATTCA+TGG | 0.403263 | 1.4:-50715917 | MS.gene065640:CDS |
ACCAAAATCATCTATTCATC+AGG | 0.404269 | 1.4:+50715719 | None:intergenic |
AAACATTGATAGATTCTCTC+TGG | 0.408364 | 1.4:+50715846 | None:intergenic |
TTTGAGATACTATCTTTGTC+TGG | 0.410882 | 1.4:-50717094 | MS.gene065640:CDS |
AAACTTCCTGGTGTTGTTGT+TGG | 0.414109 | 1.4:+50718876 | None:intergenic |
GGTCCTGACGGTCGAGTAAT+CGG | 0.416389 | 1.4:-50717004 | MS.gene065640:CDS |
CTAGGTCAACCTGGTTCTAC+TGG | 0.416830 | 1.4:-50717853 | MS.gene065640:CDS |
GCTGGTGTTCTTATAGCTGC+TGG | 0.429689 | 1.4:-50716971 | MS.gene065640:CDS |
AGTTCTTATGCCACTATTGT+CGG | 0.434638 | 1.4:+50717057 | None:intergenic |
TTAACAATCTTCTTGTAACT+TGG | 0.437261 | 1.4:+50718789 | None:intergenic |
CCACTCCTGATGATGATACT+TGG | 0.440882 | 1.4:-50715799 | MS.gene065640:CDS |
AGAAAATATCATACTTGTAT+GGG | 0.443003 | 1.4:+50716947 | None:intergenic |
GATTCTCTCTGGATTTGATC+AGG | 0.443447 | 1.4:+50715857 | None:intergenic |
AACTTTAGAGATTGCTCCAT+TGG | 0.453949 | 1.4:+50717879 | None:intergenic |
GTGGCTTCTCCAACTTCAAC+TGG | 0.454329 | 1.4:-50715968 | MS.gene065640:CDS |
GGCAAAGAAATATTGATGTC+AGG | 0.467800 | 1.4:+50715740 | None:intergenic |
GGATTGAGCGTCTCGCTAGC+TGG | 0.473829 | 1.4:-50717025 | MS.gene065640:CDS |
AAATCCACAGCAGCTGTGCT+TGG | 0.476159 | 1.4:+50718140 | None:intergenic |
CTGTTCCAAGTATCATCATC+AGG | 0.478067 | 1.4:+50715794 | None:intergenic |
GAAAGAATACATATTCCTCT+TGG | 0.479921 | 1.4:+50717904 | None:intergenic |
TCTTGGTTTCAGATTGTAGT+GGG | 0.483076 | 1.4:-50716055 | MS.gene065640:intron |
TTTGTCACTTTGTAGGATGT+TGG | 0.483338 | 1.4:-50717958 | MS.gene065640:intron |
ATTTCTGGACCAGTTGAAGT+TGG | 0.494397 | 1.4:+50715959 | None:intergenic |
GTAATCGGAGGTGCTGTTGC+TGG | 0.497506 | 1.4:-50716989 | MS.gene065640:CDS |
GTTGTTGTTGGTGTGACTGT+TGG | 0.501545 | 1.4:+50718888 | None:intergenic |
AACAACAGCAATGTTTCAGT+TGG | 0.502217 | 1.4:-50719026 | MS.gene065640:CDS |
ATATGTATTCTTTCTGCCAA+TGG | 0.503403 | 1.4:-50717895 | MS.gene065640:CDS |
GTGGGGAGCTTCGTGTCAAA+TGG | 0.505548 | 1.4:-50716037 | MS.gene065640:CDS |
ATGTTCATGTTCATTTCTTG+AGG | 0.510057 | 1.4:+50718969 | None:intergenic |
CCAAGAAAATATGATGCTGA+TGG | 0.513931 | 1.4:-50718822 | MS.gene065640:CDS |
GTCACACCAACAACAACACC+AGG | 0.516153 | 1.4:-50718882 | MS.gene065640:CDS |
ATCTTTGTCTGGATCTTACA+CGG | 0.516175 | 1.4:-50717083 | MS.gene065640:CDS |
GTTTCCAAGCACAGCTGCTG+TGG | 0.518458 | 1.4:-50718144 | MS.gene065640:CDS |
TACACGGCTTCCGACAATAG+TGG | 0.519167 | 1.4:-50717067 | MS.gene065640:CDS |
CCTGGTGGTGATGTTAGTAT+TGG | 0.530826 | 1.4:+50718756 | None:intergenic |
ACAACAGCAATGTTTCAGTT+GGG | 0.533238 | 1.4:-50719025 | MS.gene065640:CDS |
GGTGATGTTAGTATTGGTGT+TGG | 0.537464 | 1.4:+50718762 | None:intergenic |
ATGAACATGAACATAAGTGT+TGG | 0.538632 | 1.4:-50718960 | MS.gene065640:CDS |
CCTCCGATTACTCGACCGTC+AGG | 0.542913 | 1.4:+50717001 | None:intergenic |
GTCTCGCTAGCTGGTCCTGA+CGG | 0.552110 | 1.4:-50717016 | MS.gene065640:CDS |
GTCACTTTGTAGGATGTTGG+TGG | 0.552302 | 1.4:-50717955 | MS.gene065640:intron |
TTTGTAGACAAAGTGAATCC+TGG | 0.553687 | 1.4:+50718738 | None:intergenic |
CATGTAATCACAGTTTATGC+AGG | 0.557312 | 1.4:-50718110 | MS.gene065640:CDS |
CTGATGAATATTCAGATCAA+AGG | 0.560465 | 1.4:-50715769 | MS.gene065640:CDS |
TTTGTTGTTGCTAGTTCTTG+TGG | 0.587630 | 1.4:+50718999 | None:intergenic |
GGCATAAGAACTCGTGAGGG+TGG | 0.588092 | 1.4:-50717046 | MS.gene065640:CDS |
TTCTTGGTTTCAGATTGTAG+TGG | 0.588884 | 1.4:-50716056 | MS.gene065640:intron |
GAAAATATCATACTTGTATG+GGG | 0.602829 | 1.4:+50716948 | None:intergenic |
CTTGGTTTCAGATTGTAGTG+GGG | 0.614189 | 1.4:-50716054 | MS.gene065640:intron |
TAGTGGCATAAGAACTCGTG+AGG | 0.614495 | 1.4:-50717050 | MS.gene065640:CDS |
AAAGTTGCACTAGGTCAACC+TGG | 0.616623 | 1.4:-50717862 | MS.gene065640:CDS |
AATCACAGTTTATGCAGGAG+AGG | 0.637801 | 1.4:-50718105 | MS.gene065640:intron |
CCAAGTATCATCATCAGGAG+TGG | 0.638537 | 1.4:+50715799 | None:intergenic |
GCAATCTCTAAAGTTGCACT+AGG | 0.638595 | 1.4:-50717871 | MS.gene065640:CDS |
CCAATACTAACATCACCACC+AGG | 0.647483 | 1.4:-50718756 | MS.gene065640:CDS |
AAGCCACTGTTTGTTCACGT+TGG | 0.653220 | 1.4:+50715984 | None:intergenic |
ATGCTACCACCAGTAGAACC+AGG | 0.659895 | 1.4:+50717844 | None:intergenic |
TTTGCACAGAAGAGTCCAAG+AGG | 0.677413 | 1.4:-50717919 | MS.gene065640:CDS |
GGTCAACCTGGTTCTACTGG+TGG | 0.677585 | 1.4:-50717850 | MS.gene065640:CDS |
CCTGACGGTCGAGTAATCGG+AGG | 0.685399 | 1.4:-50717001 | MS.gene065640:CDS |
AGTGGCATAAGAACTCGTGA+GGG | 0.694545 | 1.4:-50717049 | MS.gene065640:CDS |
GCATAAACTGTGATTACATG+TGG | 0.695853 | 1.4:+50718113 | None:intergenic |
GTACCAACGTGAACAAACAG+TGG | 0.714692 | 1.4:-50715987 | MS.gene065640:CDS |
GTAGACAAAGTGAATCCTGG+TGG | 0.798474 | 1.4:+50718741 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATATTTATTCATAACAA+TGG | - | chr1.4:50717850-50717869 | MS.gene065640:CDS | 10.0% |
!! | AAATATTTATTCATAACAAT+GGG | - | chr1.4:50717851-50717870 | MS.gene065640:CDS | 10.0% |
!! | ATAACTAATTTACATTATTA+GGG | + | chr1.4:50716360-50716379 | None:intergenic | 10.0% |
!!! | TTTATTTTTTTTACTTGTAA+TGG | - | chr1.4:50716402-50716421 | MS.gene065640:intron | 10.0% |
!! | CATAACTAATTTACATTATT+AGG | + | chr1.4:50716361-50716380 | None:intergenic | 15.0% |
!! | GTTTGTGAAATAATTAATTT+AGG | - | chr1.4:50716521-50716540 | MS.gene065640:intron | 15.0% |
!!! | AATACTATATATGCTTTATT+TGG | + | chr1.4:50718617-50718636 | None:intergenic | 15.0% |
!! | AAAAAGAAGAAGAAAAACAT+GGG | + | chr1.4:50716167-50716186 | None:intergenic | 20.0% |
!! | AAAAGAGTAATAACAATAAC+AGG | + | chr1.4:50717572-50717591 | None:intergenic | 20.0% |
!! | AAAATTGAACCAACAATTAA+AGG | + | chr1.4:50717001-50717020 | None:intergenic | 20.0% |
!! | AAAATTGGATATAAAGTGAT+AGG | + | chr1.4:50718337-50718356 | None:intergenic | 20.0% |
!! | AAATTGAACCAACAATTAAA+GGG | + | chr1.4:50717000-50717019 | None:intergenic | 20.0% |
!! | AAGAAAATATCATACTTGTA+TGG | + | chr1.4:50717819-50717838 | None:intergenic | 20.0% |
!! | ACCAACTGATAAATATAAAA+TGG | + | chr1.4:50718298-50718317 | None:intergenic | 20.0% |
!! | AGAAAATATCATACTTGTAT+GGG | + | chr1.4:50717818-50717837 | None:intergenic | 20.0% |
!! | CATAAAAAAACAAATTCACA+CGG | + | chr1.4:50716482-50716501 | None:intergenic | 20.0% |
!! | GAAAATAATACTATTGTTCA+AGG | + | chr1.4:50717036-50717055 | None:intergenic | 20.0% |
!! | TTATGTATTTATTTCAGCTA+TGG | + | chr1.4:50718664-50718683 | None:intergenic | 20.0% |
!!! | AACATTTTTAGCTAACAAAT+AGG | + | chr1.4:50717193-50717212 | None:intergenic | 20.0% |
!!! | ACATTTTGCAATTTTATACT+AGG | + | chr1.4:50717332-50717351 | None:intergenic | 20.0% |
!!! | ATATTATTTTGTCACTTTGT+AGG | - | chr1.4:50716797-50716816 | MS.gene065640:intron | 20.0% |
!!! | ATATTTTTCCCTTTAATTGT+TGG | - | chr1.4:50716989-50717008 | MS.gene065640:CDS | 20.0% |
!!! | TGAACAATAGTATTATTTTC+TGG | - | chr1.4:50717036-50717055 | MS.gene065640:CDS | 20.0% |
!!! | TTACATTCTAAAAATTGTGA+TGG | - | chr1.4:50717590-50717609 | MS.gene065640:intron | 20.0% |
!!! | TTCTTCTTTTTCTTTACAAT+GGG | - | chr1.4:50716176-50716195 | MS.gene065640:intron | 20.0% |
!!! | TTTTCATCTCTTAGTTTATA+GGG | - | chr1.4:50716274-50716293 | MS.gene065640:intron | 20.0% |
!!! | TTTTTCATCTCTTAGTTTAT+AGG | - | chr1.4:50716273-50716292 | MS.gene065640:intron | 20.0% |
! | AAACTATCTCAAACTAAAGT+AGG | - | chr1.4:50717981-50718000 | MS.gene065640:intron | 25.0% |
! | AACAGTATTGTAACTACTAT+TGG | - | chr1.4:50715826-50715845 | MS.gene065640:CDS | 25.0% |
! | CTTAGAGTAATTACTCAATT+TGG | - | chr1.4:50717280-50717299 | MS.gene065640:intron | 25.0% |
! | GAAAAAGAAGAAGAAAAACA+TGG | + | chr1.4:50716168-50716187 | None:intergenic | 25.0% |
! | GAAAATATCATACTTGTATG+GGG | + | chr1.4:50717817-50717836 | None:intergenic | 25.0% |
! | GAGAACTAATTCTACTAAAT+GGG | - | chr1.4:50717243-50717262 | MS.gene065640:intron | 25.0% |
! | GCATATATAGTATTTGATTG+AGG | - | chr1.4:50718623-50718642 | MS.gene065640:intron | 25.0% |
! | TAAGAATGTCTTCATTAAGT+TGG | + | chr1.4:50717430-50717449 | None:intergenic | 25.0% |
! | TAATCTTCTTAACACATTCT+TGG | - | chr1.4:50718690-50718709 | MS.gene065640:intron | 25.0% |
! | TAGTGAATAAGCTAGAAAAT+TGG | + | chr1.4:50718352-50718371 | None:intergenic | 25.0% |
! | TGAGAACTAATTCTACTAAA+TGG | - | chr1.4:50717242-50717261 | MS.gene065640:intron | 25.0% |
! | TTAACAATCTTCTTGTAACT+TGG | + | chr1.4:50715976-50715995 | None:intergenic | 25.0% |
! | TTTAACAGATCTATAGGATT+TGG | - | chr1.4:50716757-50716776 | MS.gene065640:intron | 25.0% |
!! | CTTCTTCTTTTTCTTTACAA+TGG | - | chr1.4:50716175-50716194 | MS.gene065640:intron | 25.0% |
!! | TACCAAACATTTTCTTCTTT+TGG | - | chr1.4:50716096-50716115 | MS.gene065640:intron | 25.0% |
!! | TTTATTCATAACAATGGGTT+TGG | - | chr1.4:50717856-50717875 | MS.gene065640:CDS | 25.0% |
!! | TTTGTGTGTTGTAATTTTGA+AGG | - | chr1.4:50716589-50716608 | MS.gene065640:intron | 25.0% |
!!! | AATGGCTAAATTTTTGAGTT+AGG | - | chr1.4:50716420-50716439 | MS.gene065640:intron | 25.0% |
!!! | ATGGCTAAATTTTTGAGTTA+GGG | - | chr1.4:50716421-50716440 | MS.gene065640:intron | 25.0% |
!!! | GCCATTTTATATTTATCAGT+TGG | - | chr1.4:50718294-50718313 | MS.gene065640:intron | 25.0% |
!!! | TCATTAAGTTGGTAATATTG+TGG | + | chr1.4:50717419-50717438 | None:intergenic | 25.0% |
!!! | TGAAGTTTTAACAGATCTAT+AGG | - | chr1.4:50716751-50716770 | MS.gene065640:intron | 25.0% |
!!! | TTTTCTAGCTTATTCACTAT+CGG | - | chr1.4:50718353-50718372 | MS.gene065640:intron | 25.0% |
AAACATTGATAGATTCTCTC+TGG | + | chr1.4:50718919-50718938 | None:intergenic | 30.0% | |
AGACAGATTATCTGACAATT+AGG | + | chr1.4:50717125-50717144 | None:intergenic | 30.0% | |
ATATGTATTCTTTCTGCCAA+TGG | - | chr1.4:50716867-50716886 | MS.gene065640:intron | 30.0% | |
ATCTCACAAGCAAATATTCA+TGG | - | chr1.4:50718845-50718864 | MS.gene065640:CDS | 30.0% | |
ATGAACATGAACATAAGTGT+TGG | - | chr1.4:50715802-50715821 | MS.gene065640:CDS | 30.0% | |
ATGATCGAAGTACAACTATT+TGG | - | chr1.4:50718124-50718143 | MS.gene065640:CDS | 30.0% | |
ATGTTCATGTTCATTTCTTG+AGG | + | chr1.4:50715796-50715815 | None:intergenic | 30.0% | |
CACCAAAAGAAGAAAATGTT+TGG | + | chr1.4:50716101-50716120 | None:intergenic | 30.0% | |
CATCTTTGACATTATTCACA+TGG | - | chr1.4:50717381-50717400 | MS.gene065640:intron | 30.0% | |
CTAAGTATAGAGTATGGAAA+TGG | - | chr1.4:50717076-50717095 | MS.gene065640:CDS | 30.0% | |
CTGATGAATATTCAGATCAA+AGG | - | chr1.4:50718993-50719012 | MS.gene065640:CDS | 30.0% | |
GAAAGAATACATATTCCTCT+TGG | + | chr1.4:50716861-50716880 | None:intergenic | 30.0% | |
GAAGTACAACTATTTGGTAA+TGG | - | chr1.4:50718130-50718149 | MS.gene065640:CDS | 30.0% | |
TAATGCCCTATTTACTTTCA+GGG | - | chr1.4:50717641-50717660 | MS.gene065640:intron | 30.0% | |
TACCTACTGTTGACATATAT+GGG | + | chr1.4:50717102-50717121 | None:intergenic | 30.0% | |
TATGCTATACACTAGTTGTT+CGG | + | chr1.4:50718097-50718116 | None:intergenic | 30.0% | |
TCTTCTTGTAACTTGGATTT+AGG | + | chr1.4:50715969-50715988 | None:intergenic | 30.0% | |
TGAATATTTGCTTGTGAGAT+AGG | + | chr1.4:50718845-50718864 | None:intergenic | 30.0% | |
TGATTGCATTCATAACACTA+TGG | - | chr1.4:50718056-50718075 | MS.gene065640:intron | 30.0% | |
TTAATGCCCTATTTACTTTC+AGG | - | chr1.4:50717640-50717659 | MS.gene065640:intron | 30.0% | |
TTGTACCCAAAATGTTTGAT+GGG | - | chr1.4:50716216-50716235 | MS.gene065640:intron | 30.0% | |
TTGTTTGGTAAGAAAAAGAG+AGG | - | chr1.4:50715913-50715932 | MS.gene065640:CDS | 30.0% | |
! | AAACTACCCATCAAACATTT+TGG | + | chr1.4:50716225-50716244 | None:intergenic | 30.0% |
! | AAATGAGTTTTCCTCCAAAA+AGG | - | chr1.4:50716044-50716063 | MS.gene065640:CDS | 30.0% |
! | AACTACCCATCAAACATTTT+GGG | + | chr1.4:50716224-50716243 | None:intergenic | 30.0% |
! | AATGAGTTTTCCTCCAAAAA+GGG | - | chr1.4:50716045-50716064 | MS.gene065640:CDS | 30.0% |
! | CTCTTAGTTTATAGGGTTTT+GGG | - | chr1.4:50716281-50716300 | MS.gene065640:intron | 30.0% |
! | GCATGATATGTAGAGTATTT+GGG | - | chr1.4:50718030-50718049 | MS.gene065640:intron | 30.0% |
! | TCTCTTAGTTTATAGGGTTT+TGG | - | chr1.4:50716280-50716299 | MS.gene065640:intron | 30.0% |
! | TGCATGATATGTAGAGTATT+TGG | - | chr1.4:50718029-50718048 | MS.gene065640:intron | 30.0% |
! | TTTGAGATACTATCTTTGTC+TGG | - | chr1.4:50717668-50717687 | MS.gene065640:intron | 30.0% |
!! | AATGTTTGATGGGTAGTTTT+TGG | - | chr1.4:50716226-50716245 | MS.gene065640:intron | 30.0% |
!! | CAAGCTTTTAGTGTTTTTTG+AGG | - | chr1.4:50718161-50718180 | MS.gene065640:intron | 30.0% |
!!! | AATCGTAAGTTTTGATTCAC+GGG | + | chr1.4:50718521-50718540 | None:intergenic | 30.0% |
!!! | AATTTTTGAGTTAGGGTTCA+AGG | - | chr1.4:50716428-50716447 | MS.gene065640:intron | 30.0% |
!!! | GAATCGTAAGTTTTGATTCA+CGG | + | chr1.4:50718522-50718541 | None:intergenic | 30.0% |
AAAGATGCAAATCTGACAAC+GGG | + | chr1.4:50717368-50717387 | None:intergenic | 35.0% | |
AACAACAGCAATGTTTCAGT+TGG | - | chr1.4:50715736-50715755 | MS.gene065640:CDS | 35.0% | |
AACTTGCAGTCAAATCTTGT+AGG | + | chr1.4:50717924-50717943 | None:intergenic | 35.0% | |
ACAACAACAAGCCTCTTAAA+AGG | - | chr1.4:50718750-50718769 | MS.gene065640:CDS | 35.0% | |
ACAACAGCAATGTTTCAGTT+GGG | - | chr1.4:50715737-50715756 | MS.gene065640:CDS | 35.0% | |
ACTTGCAGTCAAATCTTGTA+GGG | + | chr1.4:50717923-50717942 | None:intergenic | 35.0% | |
AGTTCTTATGCCACTATTGT+CGG | + | chr1.4:50717708-50717727 | None:intergenic | 35.0% | |
ATCTTTGTCTGGATCTTACA+CGG | - | chr1.4:50717679-50717698 | MS.gene065640:intron | 35.0% | |
CAAAGATGCAAATCTGACAA+CGG | + | chr1.4:50717369-50717388 | None:intergenic | 35.0% | |
CATGTAATCACAGTTTATGC+AGG | - | chr1.4:50716652-50716671 | MS.gene065640:intron | 35.0% | |
CCAAGAAAATATGATGCTGA+TGG | - | chr1.4:50715940-50715959 | MS.gene065640:CDS | 35.0% | |
CTTCTGCTAAGTATAGAGTA+TGG | - | chr1.4:50717070-50717089 | MS.gene065640:CDS | 35.0% | |
CTTGTACCCAAAATGTTTGA+TGG | - | chr1.4:50716215-50716234 | MS.gene065640:intron | 35.0% | |
GAAGAAGAAAAACATGGGTA+AGG | + | chr1.4:50716162-50716181 | None:intergenic | 35.0% | |
GCATAAACTGTGATTACATG+TGG | + | chr1.4:50716652-50716671 | None:intergenic | 35.0% | |
GGCAAAGAAATATTGATGTC+AGG | + | chr1.4:50719025-50719044 | None:intergenic | 35.0% | |
GTACCTACTGTTGACATATA+TGG | + | chr1.4:50717103-50717122 | None:intergenic | 35.0% | |
TAACTTATCCATCATCCTCA+CGG | - | chr1.4:50718417-50718436 | MS.gene065640:intron | 35.0% | |
TCTTGGTTTCAGATTGTAGT+GGG | - | chr1.4:50718707-50718726 | MS.gene065640:intron | 35.0% | |
TGTCTCTACTTGAAGTTGAA+GGG | - | chr1.4:50717150-50717169 | MS.gene065640:intron | 35.0% | |
TTCTTGGTTTCAGATTGTAG+TGG | - | chr1.4:50718706-50718725 | MS.gene065640:intron | 35.0% | |
TTGTCTCTACTTGAAGTTGA+AGG | - | chr1.4:50717149-50717168 | MS.gene065640:intron | 35.0% | |
TTTGTAGACAAAGTGAATCC+TGG | + | chr1.4:50716027-50716046 | None:intergenic | 35.0% | |
! | AACTTTAGAGATTGCTCCAT+TGG | + | chr1.4:50716886-50716905 | None:intergenic | 35.0% |
! | CCATCAGCATCATATTTTCT+TGG | + | chr1.4:50715943-50715962 | None:intergenic | 35.0% |
!! | GTGTTGTAATTTTGAAGGTG+AGG | - | chr1.4:50716594-50716613 | MS.gene065640:intron | 35.0% |
!! | TTTGTCACTTTGTAGGATGT+TGG | - | chr1.4:50716804-50716823 | MS.gene065640:intron | 35.0% |
!! | TTTGTTGTTGCTAGTTCTTG+TGG | + | chr1.4:50715766-50715785 | None:intergenic | 35.0% |
!!! | AGGGATATTTTTTGACTCGT+GGG | + | chr1.4:50718472-50718491 | None:intergenic | 35.0% |
AACAACAACACCAGGAAGTT+TGG | - | chr1.4:50715888-50715907 | MS.gene065640:CDS | 40.0% | |
AACCGTCCCTGAAAGTAAAT+AGG | + | chr1.4:50717650-50717669 | None:intergenic | 40.0% | |
AACTTATCCATCATCCTCAC+GGG | - | chr1.4:50718418-50718437 | MS.gene065640:intron | 40.0% | |
AATAATTCGCGTGGCATTTG+TGG | + | chr1.4:50718559-50718578 | None:intergenic | 40.0% | |
AATCACAGTTTATGCAGGAG+AGG | - | chr1.4:50716657-50716676 | MS.gene065640:intron | 40.0% | |
ACCGTCCCTGAAAGTAAATA+GGG | + | chr1.4:50717649-50717668 | None:intergenic | 40.0% | |
ATAATTCGCGTGGCATTTGT+GGG | + | chr1.4:50718558-50718577 | None:intergenic | 40.0% | |
CACTTGAGCTAATCTCATGA+TGG | + | chr1.4:50717220-50717239 | None:intergenic | 40.0% | |
CCAAACAAATCCAAACTTCC+TGG | + | chr1.4:50715901-50715920 | None:intergenic | 40.0% | |
CTGTTCCAAGTATCATCATC+AGG | + | chr1.4:50718971-50718990 | None:intergenic | 40.0% | |
CTTGGTTTCAGATTGTAGTG+GGG | - | chr1.4:50718708-50718727 | MS.gene065640:intron | 40.0% | |
GATTCTCTCTGGATTTGATC+AGG | + | chr1.4:50718908-50718927 | None:intergenic | 40.0% | |
GGAAGCTGATGAGACATAAT+AGG | + | chr1.4:50718887-50718906 | None:intergenic | 40.0% | |
TAGAACTGAGACAGAGAAAC+AGG | + | chr1.4:50717512-50717531 | None:intergenic | 40.0% | |
TCTACTTGAAGTTGAAGGGT+TGG | - | chr1.4:50717154-50717173 | MS.gene065640:intron | 40.0% | |
! | ATTTCTGGACCAGTTGAAGT+TGG | + | chr1.4:50718806-50718825 | None:intergenic | 40.0% |
! | CCAGGAAGTTTGGATTTGTT+TGG | - | chr1.4:50715898-50715917 | MS.gene065640:CDS | 40.0% |
! | CGTTGGTACTTCCTTTTAAG+AGG | + | chr1.4:50718764-50718783 | None:intergenic | 40.0% |
! | TGATTTACCACGACCCTTTT+TGG | + | chr1.4:50716061-50716080 | None:intergenic | 40.0% |
! | TTTGAGTTAGGGTTCAAGGT+CGG | - | chr1.4:50716432-50716451 | MS.gene065640:intron | 40.0% |
!! | AAACTTCCTGGTGTTGTTGT+TGG | + | chr1.4:50715889-50715908 | None:intergenic | 40.0% |
!! | GCAATCTCTAAAGTTGCACT+AGG | - | chr1.4:50716891-50716910 | MS.gene065640:intron | 40.0% |
!! | GGTGATGTTAGTATTGGTGT+TGG | + | chr1.4:50716003-50716022 | None:intergenic | 40.0% |
!! | TGGTAGCATTTTGACGTATG+AGG | - | chr1.4:50716932-50716951 | MS.gene065640:intron | 40.0% |
!!! | CAGGGATATTTTTTGACTCG+TGG | + | chr1.4:50718473-50718492 | None:intergenic | 40.0% |
AAAGTTGCACTAGGTCAACC+TGG | - | chr1.4:50716900-50716919 | MS.gene065640:intron | 45.0% | |
AAGCCACTGTTTGTTCACGT+TGG | + | chr1.4:50718781-50718800 | None:intergenic | 45.0% | |
AAGGGTCGTGGTAAATCAAC+TGG | - | chr1.4:50716063-50716082 | MS.gene065640:intron | 45.0% | |
AATTTGACCCGTGAGGATGA+TGG | + | chr1.4:50718428-50718447 | None:intergenic | 45.0% | |
AGCTTGAGCAATAATTCGCG+TGG | + | chr1.4:50718568-50718587 | None:intergenic | 45.0% | |
AGGGTCGTGGTAAATCAACT+GGG | - | chr1.4:50716064-50716083 | MS.gene065640:intron | 45.0% | |
AGTGGCATAAGAACTCGTGA+GGG | - | chr1.4:50717713-50717732 | MS.gene065640:intron | 45.0% | |
CCAAGTATCATCATCAGGAG+TGG | + | chr1.4:50718966-50718985 | None:intergenic | 45.0% | |
CCAATACTAACATCACCACC+AGG | - | chr1.4:50716006-50716025 | MS.gene065640:CDS | 45.0% | |
GCCCTATTTACTTTCAGGGA+CGG | - | chr1.4:50717645-50717664 | MS.gene065640:intron | 45.0% | |
GGAACAAAATTTGACCCGTG+AGG | + | chr1.4:50718435-50718454 | None:intergenic | 45.0% | |
GGCCCATATATGTCAACAGT+AGG | - | chr1.4:50717097-50717116 | MS.gene065640:CDS | 45.0% | |
GTACCAACGTGAACAAACAG+TGG | - | chr1.4:50718775-50718794 | MS.gene065640:CDS | 45.0% | |
GTAGACAAAGTGAATCCTGG+TGG | + | chr1.4:50716024-50716043 | None:intergenic | 45.0% | |
TAGTGGCATAAGAACTCGTG+AGG | - | chr1.4:50717712-50717731 | MS.gene065640:intron | 45.0% | |
TTTGCACAGAAGAGTCCAAG+AGG | - | chr1.4:50716843-50716862 | MS.gene065640:intron | 45.0% | |
! | CACTATGGCTCTGTTTGTCA+AGG | - | chr1.4:50718071-50718090 | MS.gene065640:intron | 45.0% |
! | CCACTCCTGATGATGATACT+TGG | - | chr1.4:50718963-50718982 | MS.gene065640:CDS | 45.0% |
! | CCTGGTGGTGATGTTAGTAT+TGG | + | chr1.4:50716009-50716028 | None:intergenic | 45.0% |
! | GTCACTTTGTAGGATGTTGG+TGG | - | chr1.4:50716807-50716826 | MS.gene065640:intron | 45.0% |
! | GTTGTTGTTGGTGTGACTGT+TGG | + | chr1.4:50715877-50715896 | None:intergenic | 45.0% |
! | TTTACCACGACCCTTTTTGG+AGG | + | chr1.4:50716058-50716077 | None:intergenic | 45.0% |
! | TTTTCCTCCAAAAAGGGTCG+TGG | - | chr1.4:50716051-50716070 | MS.gene065640:intron | 45.0% |
!! | GCATTTTGACGTATGAGGCA+TGG | - | chr1.4:50716937-50716956 | MS.gene065640:intron | 45.0% |
AAATCCACAGCAGCTGTGCT+TGG | + | chr1.4:50716625-50716644 | None:intergenic | 50.0% | |
ATGCTACCACCAGTAGAACC+AGG | + | chr1.4:50716921-50716940 | None:intergenic | 50.0% | |
GCTGGTGTTCTTATAGCTGC+TGG | - | chr1.4:50717791-50717810 | MS.gene065640:intron | 50.0% | |
GTCACACCAACAACAACACC+AGG | - | chr1.4:50715880-50715899 | MS.gene065640:CDS | 50.0% | |
GTGGCTTCTCCAACTTCAAC+TGG | - | chr1.4:50718794-50718813 | MS.gene065640:CDS | 50.0% | |
TACACGGCTTCCGACAATAG+TGG | - | chr1.4:50717695-50717714 | MS.gene065640:intron | 50.0% | |
! | CGTGCTGCTGTGACTATTTC+TGG | + | chr1.4:50718821-50718840 | None:intergenic | 50.0% |
!! | AAGCGAGGTGTGGTTTTGCA+GGG | + | chr1.4:50718491-50718510 | None:intergenic | 50.0% |
!! | CTAGGTCAACCTGGTTCTAC+TGG | - | chr1.4:50716909-50716928 | MS.gene065640:intron | 50.0% |
CTCGTGGGTCGTTGCTTACT+CGG | + | chr1.4:50718457-50718476 | None:intergenic | 55.0% | |
GGCATAAGAACTCGTGAGGG+TGG | - | chr1.4:50717716-50717735 | MS.gene065640:intron | 55.0% | |
GGTCCTGACGGTCGAGTAAT+CGG | - | chr1.4:50717758-50717777 | MS.gene065640:intron | 55.0% | |
GTGGGGAGCTTCGTGTCAAA+TGG | - | chr1.4:50718725-50718744 | MS.gene065640:CDS | 55.0% | |
GTTTCCAAGCACAGCTGCTG+TGG | - | chr1.4:50716618-50716637 | MS.gene065640:intron | 55.0% | |
TCGTGGGTCGTTGCTTACTC+GGG | + | chr1.4:50718456-50718475 | None:intergenic | 55.0% | |
!! | CAAGCGAGGTGTGGTTTTGC+AGG | + | chr1.4:50718492-50718511 | None:intergenic | 55.0% |
!! | GGTCAACCTGGTTCTACTGG+TGG | - | chr1.4:50716912-50716931 | MS.gene065640:intron | 55.0% |
!! | GTAATCGGAGGTGCTGTTGC+TGG | - | chr1.4:50717773-50717792 | MS.gene065640:intron | 55.0% |
CCTCCGATTACTCGACCGTC+AGG | + | chr1.4:50717764-50717783 | None:intergenic | 60.0% | |
CCTGACGGTCGAGTAATCGG+AGG | - | chr1.4:50717761-50717780 | MS.gene065640:intron | 60.0% | |
GGATTGAGCGTCTCGCTAGC+TGG | - | chr1.4:50717737-50717756 | MS.gene065640:intron | 60.0% | |
GTCTCGCTAGCTGGTCCTGA+CGG | - | chr1.4:50717746-50717765 | MS.gene065640:intron | 60.0% | |
TTCACGGGTCGTGACAAGCG+AGG | + | chr1.4:50718506-50718525 | None:intergenic | 60.0% | |
GGGTCGTGACAAGCGAGGTG+TGG | + | chr1.4:50718501-50718520 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 50715730 | 50719054 | 50715730 | ID=MS.gene065640 |
chr1.4 | mRNA | 50715730 | 50719054 | 50715730 | ID=MS.gene065640.t1;Parent=MS.gene065640 |
chr1.4 | exon | 50718712 | 50719054 | 50718712 | ID=MS.gene065640.t1.exon1;Parent=MS.gene065640.t1 |
chr1.4 | CDS | 50718712 | 50719054 | 50718712 | ID=cds.MS.gene065640.t1;Parent=MS.gene065640.t1 |
chr1.4 | exon | 50718106 | 50718173 | 50718106 | ID=MS.gene065640.t1.exon2;Parent=MS.gene065640.t1 |
chr1.4 | CDS | 50718106 | 50718173 | 50718106 | ID=cds.MS.gene065640.t1;Parent=MS.gene065640.t1 |
chr1.4 | exon | 50717831 | 50717965 | 50717831 | ID=MS.gene065640.t1.exon3;Parent=MS.gene065640.t1 |
chr1.4 | CDS | 50717831 | 50717965 | 50717831 | ID=cds.MS.gene065640.t1;Parent=MS.gene065640.t1 |
chr1.4 | exon | 50716961 | 50717122 | 50716961 | ID=MS.gene065640.t1.exon4;Parent=MS.gene065640.t1 |
chr1.4 | CDS | 50716961 | 50717122 | 50716961 | ID=cds.MS.gene065640.t1;Parent=MS.gene065640.t1 |
chr1.4 | exon | 50715730 | 50716065 | 50715730 | ID=MS.gene065640.t1.exon5;Parent=MS.gene065640.t1 |
chr1.4 | CDS | 50715730 | 50716065 | 50715730 | ID=cds.MS.gene065640.t1;Parent=MS.gene065640.t1 |
Gene Sequence |
Protein sequence |