AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene05124


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05124.t1 MTR_3g062490 96.305 433 16 0 1 433 1 433 0.0 878
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene05124.t1 AT5G41880 66.898 432 142 1 3 433 20 451 0.0 625

Find 93 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTGCAACTTTAAATTAT+AGG 0.152070 3.4:-64797976 None:intergenic
CTGATGTTTGCTTGGATTGC+TGG 0.175005 3.4:+64793287 MS.gene05124:CDS
GTAATATGGTTTGAGAAAAT+TGG 0.179480 3.4:-64792400 None:intergenic
TGCTGCTCTTCATCCTTTCT+TGG 0.219140 3.4:+64794882 MS.gene05124:CDS
CTTATGCTGATATATTTAAA+TGG 0.242848 3.4:+64792564 MS.gene05124:CDS
TCAAACTCGTCGCACCGATT+TGG 0.308608 3.4:-64796641 None:intergenic
CTTCTGAACTTAGGGGAAAA+TGG 0.309145 3.4:+64795188 MS.gene05124:CDS
ATATTTAAATGGATGTCTTA+TGG 0.313114 3.4:+64792575 MS.gene05124:CDS
GGTCCAATGTCAATCTTTAA+AGG 0.318846 3.4:-64792823 None:intergenic
GGATGTAACTAACCGTAATA+TGG 0.322356 3.4:-64792414 None:intergenic
CAAACTCGTCGCACCGATTT+GGG 0.324581 3.4:-64796640 None:intergenic
CAGCTGTTGCTTCTGAACTT+AGG 0.327727 3.4:+64795179 MS.gene05124:intron
CAAGGGTGCTGATGTTTGCT+TGG 0.351983 3.4:+64793279 MS.gene05124:CDS
TGCATAAATTTACCTGGAAA+AGG 0.360793 3.4:-64796682 None:intergenic
AGCTGTTGCTTCTGAACTTA+GGG 0.372658 3.4:+64795180 MS.gene05124:intron
CAAGGGCATTGTTGTAAGAT+TGG 0.376905 3.4:-64792771 None:intergenic
AAAATCAACTCCCTCTCAAC+TGG 0.382678 3.4:-64793109 None:intergenic
ATGTGGTTCAGCCTGCAAAA+AGG 0.392955 3.4:+64793050 MS.gene05124:intron
TGCAAGCAGTTGTTGCAATC+TGG 0.396731 3.4:+64795271 MS.gene05124:CDS
TCATAAGAAGGTTTCTTTGA+TGG 0.398817 3.4:+64794858 MS.gene05124:CDS
TACTTACCCCAGGCTAGATA+TGG 0.399800 3.4:+64796088 MS.gene05124:CDS
GGAAGAATCAATCACTTTGA+TGG 0.406439 3.4:-64793326 None:intergenic
GGGGAAAATGGCAAGACAAT+AGG 0.421032 3.4:+64795200 MS.gene05124:CDS
TTCATTGTTGGGTGTGTGAT+GGG 0.424472 3.4:+64794407 MS.gene05124:CDS
CATAAGAAGGTTTCTTTGAT+GGG 0.427571 3.4:+64794859 MS.gene05124:CDS
TCGCACCGATTTGGGTCAAT+AGG 0.440085 3.4:-64796632 None:intergenic
CTAGATGAGCTTAATAATGA+AGG 0.443170 3.4:+64796979 MS.gene05124:CDS
GGCTGTGATCAGTCCTACTT+TGG 0.450382 3.4:+64792700 MS.gene05124:CDS
GTCCAATGTCAATCTTTAAA+GGG 0.452622 3.4:-64792822 None:intergenic
GACGAAGAGGTGTTCATTGT+TGG 0.457076 3.4:+64794395 MS.gene05124:CDS
GCATAAATTTACCTGGAAAA+GGG 0.457809 3.4:-64796681 None:intergenic
AAATGTAATGTACATTCATC+AGG 0.458206 3.4:-64795082 None:intergenic
GGCTTGAGAGCTGATGTTAA+TGG 0.464362 3.4:+64797000 MS.gene05124:CDS
CACATACTCTGGGTCTATAG+TGG 0.465375 3.4:+64794373 MS.gene05124:CDS
ACTACTGTTTCAGATGACTT+TGG 0.467950 3.4:+64794343 MS.gene05124:intron
AAATTCCCTTCTTCCAAAGT+AGG 0.470331 3.4:-64792713 None:intergenic
GTTGCAATCTGGAAAACATA+AGG 0.478385 3.4:+64795282 MS.gene05124:CDS
GTTCATTGTTGGGTGTGTGA+TGG 0.479437 3.4:+64794406 MS.gene05124:CDS
ATCAATCACTTTGATGGCTA+TGG 0.483305 3.4:-64793320 None:intergenic
ATCAGTCCTACTTTGGAAGA+AGG 0.484427 3.4:+64792707 MS.gene05124:CDS
ACAGACCTCCATATCTAGCC+TGG 0.488928 3.4:-64796096 None:intergenic
TGCCCTTTAAAGATTGACAT+TGG 0.495107 3.4:+64792820 MS.gene05124:CDS
ACGAAGAGGTGTTCATTGTT+GGG 0.495453 3.4:+64794396 MS.gene05124:CDS
GAATGGAGTGGAACTTCCCT+TGG 0.497327 3.4:+64797619 MS.gene05124:intron
CTCAAGACTTACGCCAAGAA+AGG 0.498182 3.4:-64794895 None:intergenic
ATTGTAGATGGGAAACATCC+TGG 0.501473 3.4:+64792679 MS.gene05124:intron
CATTTAAATATATCAGCATA+AGG 0.502545 3.4:-64792563 None:intergenic
TTGGCTTCAAGCACATACTC+TGG 0.507696 3.4:+64794362 MS.gene05124:CDS
ATTATTATCACTTTGTGCAT+AGG 0.508200 3.4:-64793077 None:intergenic
CAAACTCAGAATCTTGTTGT+GGG 0.516943 3.4:-64792374 None:intergenic
ATTCATCAGGAATCATGCTT+AGG 0.517226 3.4:-64795069 None:intergenic
TGTGTGATGGGAAGGCTAGA+AGG 0.517538 3.4:+64794419 MS.gene05124:CDS
GTGTTCCTATTGACCCAAAT+CGG 0.520731 3.4:+64796627 MS.gene05124:CDS
TGCATTGCACTACCAACCTA+TGG 0.526014 3.4:-64798009 None:intergenic
AAAAGGGTGGGTACTGTGGT+AGG 0.526266 3.4:-64796665 None:intergenic
ACGCAAATTACTACCTCTCA+AGG 0.539006 3.4:-64793347 None:intergenic
AGATATTAATGTTGTGCGGT+GGG 0.549249 3.4:+64795243 MS.gene05124:CDS
CAATGAAAATAGTCATAAGA+AGG 0.549770 3.4:+64794846 MS.gene05124:CDS
TTGATGGCTATGGTCATCAA+TGG 0.552196 3.4:-64793310 None:intergenic
TCAAACTCAGAATCTTGTTG+TGG 0.556258 3.4:-64792375 None:intergenic
CAGACCTCCATATCTAGCCT+GGG 0.557133 3.4:-64796095 None:intergenic
GTTACATCGACTGTGTAGAC+AGG 0.559275 3.4:-64792844 None:intergenic
AAATGGATGTCTTATGGCAA+CGG 0.560209 3.4:+64792581 MS.gene05124:CDS
TTGTTGGGTGTGTGATGGGA+AGG 0.560818 3.4:+64794411 MS.gene05124:CDS
TACTGCAGGAGGAGATAGAA+AGG 0.563804 3.4:+64797952 MS.gene05124:intron
AAGATATTAATGTTGTGCGG+TGG 0.564243 3.4:+64795242 MS.gene05124:CDS
TGGCTTCAAGCACATACTCT+GGG 0.565334 3.4:+64794363 MS.gene05124:CDS
AAAGCGTAACTGAGTTTCCA+AGG 0.568628 3.4:-64797636 None:intergenic
TAAATTTACCTGGAAAAGGG+TGG 0.571443 3.4:-64796678 None:intergenic
GTGATTGATTCTTCCTTGAG+AGG 0.573001 3.4:+64793334 MS.gene05124:CDS
AAAGTCATCGTTCAAAGTGA+AGG 0.573086 3.4:-64792737 None:intergenic
AAAATAGTCCTTGAGAACAT+TGG 0.578336 3.4:-64794987 None:intergenic
ATCATACACCAATGTTCTCA+AGG 0.579918 3.4:+64794979 MS.gene05124:CDS
TCAGTCCTACTTTGGAAGAA+GGG 0.583160 3.4:+64792708 MS.gene05124:CDS
TGTTCTGCTATACTTACCCC+AGG 0.586755 3.4:+64796078 MS.gene05124:CDS
CAGCAGTCAAAGAACTCCAT+AGG 0.587531 3.4:+64797993 MS.gene05124:CDS
AAGTAGGACTGATCACAGCC+AGG 0.597622 3.4:-64792697 None:intergenic
CTGGAAAAGGGTGGGTACTG+TGG 0.601068 3.4:-64796669 None:intergenic
TGTCTTCACTCCAGTTGAGA+GGG 0.602905 3.4:+64793099 MS.gene05124:CDS
ATGTCTTCACTCCAGTTGAG+AGG 0.606406 3.4:+64793098 MS.gene05124:CDS
AGTCAAAGAACTCCATAGGT+TGG 0.606427 3.4:+64797997 MS.gene05124:CDS
TTACCCCAGGCTAGATATGG+AGG 0.628406 3.4:+64796091 MS.gene05124:CDS
AAATTTACCTGGAAAAGGGT+GGG 0.629339 3.4:-64796677 None:intergenic
TCAAAACTTACTCGCTACTG+AGG 0.630959 3.4:+64795030 MS.gene05124:CDS
GCTGTTGCTTCTGAACTTAG+GGG 0.640099 3.4:+64795181 MS.gene05124:intron
GATGTCAGATACTGCTGCAA+GGG 0.646848 3.4:+64793262 MS.gene05124:CDS
AAGCGTAACTGAGTTTCCAA+GGG 0.661590 3.4:-64797635 None:intergenic
AAGAAGATATTAATGTTGTG+CGG 0.661821 3.4:+64795239 MS.gene05124:CDS
TGGGTCTATAGTGGACGAAG+AGG 0.693990 3.4:+64794382 MS.gene05124:CDS
TGATGTCAGATACTGCTGCA+AGG 0.695095 3.4:+64793261 MS.gene05124:CDS
AGACCTCCATATCTAGCCTG+GGG 0.714360 3.4:-64796094 None:intergenic
TGTTTGGTAGCAGAATGGAG+TGG 0.725763 3.4:+64797607 MS.gene05124:intron
TTGAGAGCTGATGTTAATGG+TGG 0.727071 3.4:+64797003 MS.gene05124:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAGAATAAATATGATTA+TGG - chr3.4:64795828-64795847 None:intergenic 10.0%
!! AAAGAGAAAAAAATAAAAGA+GGG - chr3.4:64793209-64793228 None:intergenic 15.0%
!! AATAAAAATTGCAAATGTTT+AGG - chr3.4:64797064-64797083 None:intergenic 15.0%
!! TGATATATAGATACATATTT+GGG - chr3.4:64796209-64796228 None:intergenic 15.0%
!! TTGATATATAGATACATATT+TGG - chr3.4:64796210-64796229 None:intergenic 15.0%
!!! AAGGTATAAAATATTCTTTT+TGG + chr3.4:64795301-64795320 MS.gene05124:intron 15.0%
!!! AATTATTATAGATGGTTTTA+GGG - chr3.4:64794182-64794201 None:intergenic 15.0%
!!! AGACTTAATTTTTAAAAAAC+AGG + chr3.4:64793428-64793447 MS.gene05124:intron 15.0%
!!! AGGTATAAAATATTCTTTTT+GGG + chr3.4:64795302-64795321 MS.gene05124:intron 15.0%
!!! TAATTATTATAGATGGTTTT+AGG - chr3.4:64794183-64794202 None:intergenic 15.0%
!!! TATTATTTATATGCTTGTTA+AGG - chr3.4:64795557-64795576 None:intergenic 15.0%
!!! TTGTTTATTTATTTAAGATG+AGG + chr3.4:64795732-64795751 MS.gene05124:intron 15.0%
!!! TTTGAAACATATTTAAGAAT+GGG + chr3.4:64797194-64797213 MS.gene05124:intron 15.0%
!!! TTTTATTTTTTTCTCTTTCA+TGG + chr3.4:64793211-64793230 MS.gene05124:intron 15.0%
!!! TTTTGAAACATATTTAAGAA+TGG + chr3.4:64797193-64797212 MS.gene05124:intron 15.0%
!! AACAAACATTAATACAAGTA+TGG - chr3.4:64794805-64794824 None:intergenic 20.0%
!! AACCACATAAAAATTGATTA+GGG - chr3.4:64793038-64793057 None:intergenic 20.0%
!! AACTTATGAATATACAACTT+TGG - chr3.4:64795518-64795537 None:intergenic 20.0%
!! ACAAACATTAATACAAGTAT+GGG - chr3.4:64794804-64794823 None:intergenic 20.0%
!! AGATTAATTTCCATATTACT+TGG + chr3.4:64795696-64795715 MS.gene05124:intron 20.0%
!! ATATATAGATACATATTTGG+GGG - chr3.4:64796207-64796226 None:intergenic 20.0%
!! ATATTTAAATGGATGTCTTA+TGG + chr3.4:64792575-64792594 MS.gene05124:CDS 20.0%
!! ATGATATTAACCAAGTAATA+TGG - chr3.4:64795709-64795728 None:intergenic 20.0%
!! CACAATAATACTGAATTATA+GGG - chr3.4:64792882-64792901 None:intergenic 20.0%
!! CATTTAAATATATCAGCATA+AGG - chr3.4:64792566-64792585 None:intergenic 20.0%
!! CGTAAATGAAAATAACTTAA+TGG - chr3.4:64796170-64796189 None:intergenic 20.0%
!! CTCAATCTAATTATTATAGA+TGG - chr3.4:64794190-64794209 None:intergenic 20.0%
!! CTTATGCTGATATATTTAAA+TGG + chr3.4:64792564-64792583 MS.gene05124:CDS 20.0%
!! CTTTCATTTATTTAAAAGAG+AGG - chr3.4:64793611-64793630 None:intergenic 20.0%
!! GAAAGAGAAAAAAATAAAAG+AGG - chr3.4:64793210-64793229 None:intergenic 20.0%
!! GATATATAGATACATATTTG+GGG - chr3.4:64796208-64796227 None:intergenic 20.0%
!! GATTCCTATTTGAATATTTA+TGG + chr3.4:64793796-64793815 MS.gene05124:intron 20.0%
!! TATAATGCTTAGTTTATAAG+TGG + chr3.4:64797455-64797474 MS.gene05124:intron 20.0%
!! TATATTATCTTTACTATTGC+AGG + chr3.4:64794511-64794530 MS.gene05124:intron 20.0%
!! TATTAAATCTATCTTCTCTT+TGG + chr3.4:64796498-64796517 MS.gene05124:intron 20.0%
!! TTAAACGCAAAAATTTAGAT+TGG - chr3.4:64796267-64796286 None:intergenic 20.0%
!! TTGAAACATATTTAAGAATG+GGG + chr3.4:64797195-64797214 MS.gene05124:intron 20.0%
!!! AAACTAGTCAAAAGTATTAT+TGG - chr3.4:64796236-64796255 None:intergenic 20.0%
!!! AATTTTCTCAAACCATATTA+CGG + chr3.4:64792402-64792421 MS.gene05124:CDS 20.0%
!!! AGTCTTGTATTTCTATAAAT+AGG + chr3.4:64795755-64795774 MS.gene05124:intron 20.0%
!!! CTTGATAATGAATTTTGTTT+TGG + chr3.4:64794319-64794338 MS.gene05124:intron 20.0%
!!! GTCTTGTATTTCTATAAATA+GGG + chr3.4:64795756-64795775 MS.gene05124:intron 20.0%
! AAAATTGATTAGGGGAAAAA+TGG - chr3.4:64793029-64793048 None:intergenic 25.0%
! AAATGTAATGTACATTCATC+AGG - chr3.4:64795085-64795104 None:intergenic 25.0%
! AACATCTCAATTTAACAATC+TGG + chr3.4:64795864-64795883 MS.gene05124:intron 25.0%
! AAGAAGATATTAATGTTGTG+CGG + chr3.4:64795239-64795258 MS.gene05124:CDS 25.0%
! AATAAGCATTAGAAGATATG+AGG - chr3.4:64797555-64797574 None:intergenic 25.0%
! AATGAAAAGGATTTGCAAAA+TGG - chr3.4:64797525-64797544 None:intergenic 25.0%
! ACCACATAAAAATTGATTAG+GGG - chr3.4:64793037-64793056 None:intergenic 25.0%
! ACGACAATATATAGGAAAAA+GGG - chr3.4:64796831-64796850 None:intergenic 25.0%
! AGAAAATAAGAGAAAACGTA+TGG - chr3.4:64792523-64792542 None:intergenic 25.0%
! AGCAGTAAAATGAAATAACA+AGG - chr3.4:64795128-64795147 None:intergenic 25.0%
! ATAAGCATTAGAAGATATGA+GGG - chr3.4:64797554-64797573 None:intergenic 25.0%
! ATGCTTAACTGAAATTAAGA+TGG + chr3.4:64794116-64794135 MS.gene05124:intron 25.0%
! ATGTTACAAATCACAATATC+AGG - chr3.4:64796951-64796970 None:intergenic 25.0%
! ATTACCAACAATAGTTATGA+TGG - chr3.4:64797929-64797948 None:intergenic 25.0%
! ATTATTATCACTTTGTGCAT+AGG - chr3.4:64793080-64793099 None:intergenic 25.0%
! ATTTGCAAAATGGAAATGTA+GGG - chr3.4:64797515-64797534 None:intergenic 25.0%
! CAATGAAAATAGTCATAAGA+AGG + chr3.4:64794846-64794865 MS.gene05124:CDS 25.0%
! CATGTATAGAAGACTTAATA+GGG + chr3.4:64797093-64797112 MS.gene05124:intron 25.0%
! CCTACCATAAATATTCAAAT+AGG - chr3.4:64793803-64793822 None:intergenic 25.0%
! CCTATTTGAATATTTATGGT+AGG + chr3.4:64793800-64793819 MS.gene05124:intron 25.0%
! CCTTCTATAAATTCTTAAAG+GGG - chr3.4:64797430-64797449 None:intergenic 25.0%
! GAACCACATAAAAATTGATT+AGG - chr3.4:64793039-64793058 None:intergenic 25.0%
! GAAGATATTGATATGCTTAA+AGG - chr3.4:64796873-64796892 None:intergenic 25.0%
! GAGATAAAAACAAGAAACAA+AGG + chr3.4:64797477-64797496 MS.gene05124:intron 25.0%
! GCACAATAATACTGAATTAT+AGG - chr3.4:64792883-64792902 None:intergenic 25.0%
! GCCTTCTATAAATTCTTAAA+GGG - chr3.4:64797431-64797450 None:intergenic 25.0%
! GGTGTAAAATAATTGTAGAT+GGG + chr3.4:64792668-64792687 MS.gene05124:intron 25.0%
! GGTGTAATATAATTGAGAAT+AGG - chr3.4:64795807-64795826 None:intergenic 25.0%
! GTAATATGGTTTGAGAAAAT+TGG - chr3.4:64792403-64792422 None:intergenic 25.0%
! TATACTAAGTAACAACTAGT+GGG + chr3.4:64794589-64794608 MS.gene05124:intron 25.0%
! TATATAGATACATATTTGGG+GGG - chr3.4:64796206-64796225 None:intergenic 25.0%
! TATTGTTGCATAAATTTACC+TGG - chr3.4:64796691-64796710 None:intergenic 25.0%
! TCTACTCTTAACAGATATAA+TGG - chr3.4:64793918-64793937 None:intergenic 25.0%
! TGCAATATTTGTACAAATAG+TGG + chr3.4:64795364-64795383 MS.gene05124:intron 25.0%
! TGCCTTCTATAAATTCTTAA+AGG - chr3.4:64797432-64797451 None:intergenic 25.0%
! TGGTAATTCTTCTTTATTCT+AGG + chr3.4:64796596-64796615 MS.gene05124:intron 25.0%
! TGTTTAAGTGCATAATTACT+TGG + chr3.4:64796576-64796595 MS.gene05124:intron 25.0%
! TTAGAATACAAAGGTAACAA+TGG + chr3.4:64795330-64795349 MS.gene05124:intron 25.0%
!! ATACTCTAAAGATAAGAAAC+TGG - chr3.4:64795670-64795689 None:intergenic 25.0%
!! ATTTGATACTAACCTGTTTT+CGG - chr3.4:64796359-64796378 None:intergenic 25.0%
!! CTCTAACAATCTCTTTTATT+GGG + chr3.4:64793506-64793525 MS.gene05124:intron 25.0%
!! TAATAGGGATATTGCATTTT+TGG + chr3.4:64797108-64797127 MS.gene05124:intron 25.0%
!! TCTCTAACAATCTCTTTTAT+TGG + chr3.4:64793505-64793524 MS.gene05124:intron 25.0%
!! TCTTTGCATAGTTTTCATTA+GGG + chr3.4:64796754-64796773 MS.gene05124:intron 25.0%
!! TTCTTTTATAGAGAAATGCT+AGG + chr3.4:64793461-64793480 MS.gene05124:intron 25.0%
!! TTTTCTGTCTGAAAAATCAT+AGG - chr3.4:64796472-64796491 None:intergenic 25.0%
!!! AGTGATTTTGATACATTGTT+TGG + chr3.4:64797591-64797610 MS.gene05124:intron 25.0%
!!! ATTTTTTTCTCTTTCATGGT+CGG + chr3.4:64793215-64793234 MS.gene05124:intron 25.0%
!!! TATTTAAGAGTATTTCCACT+AGG - chr3.4:64793655-64793674 None:intergenic 25.0%
!!! TTATATTGACTCAAGTTGTT+GGG + chr3.4:64796396-64796415 MS.gene05124:intron 25.0%
!!! TTTATATTGACTCAAGTTGT+TGG + chr3.4:64796395-64796414 MS.gene05124:intron 25.0%
!!! TTTTTTATTTGCAACAGAGA+TGG + chr3.4:64796715-64796734 MS.gene05124:intron 25.0%
AAAAATGTTTCATACCTTGC+AGG - chr3.4:64797695-64797714 None:intergenic 30.0%
AAAATAAGCTCAATCCAAAC+AGG - chr3.4:64795430-64795449 None:intergenic 30.0%
AAAATAGTCCTTGAGAACAT+TGG - chr3.4:64794990-64795009 None:intergenic 30.0%
AAGAAACAAAGGAAGTAAGT+TGG + chr3.4:64797488-64797507 MS.gene05124:intron 30.0%
AATGAATTCAATGACCAGAT+AGG - chr3.4:64794213-64794232 None:intergenic 30.0%
ACCAAGACTATTTATGTTTC+AGG + chr3.4:64796286-64796305 MS.gene05124:intron 30.0%
ACCTGAAACATAAATAGTCT+TGG - chr3.4:64796290-64796309 None:intergenic 30.0%
AGAGTAAAATTCTCAATCCT+CGG - chr3.4:64794068-64794087 None:intergenic 30.0%
AGATAAACTAAGAACCAAGT+AGG - chr3.4:64795633-64795652 None:intergenic 30.0%
AGTATCTAAAAACTTTCAGC+AGG - chr3.4:64793165-64793184 None:intergenic 30.0%
ATAATTAGATTGAGCCTATC+TGG + chr3.4:64794196-64794215 MS.gene05124:intron 30.0%
ATAGAAGTCAAGAGCAATAA+GGG + chr3.4:64795404-64795423 MS.gene05124:intron 30.0%
ATCAAGATATCAGTGACATT+GGG - chr3.4:64794305-64794324 None:intergenic 30.0%
ATGTTCAATACCATATGCTA+CGG - chr3.4:64793999-64794018 None:intergenic 30.0%
CAAATGTTTAGGAATCAAAC+GGG - chr3.4:64797053-64797072 None:intergenic 30.0%
CACGACAATATATAGGAAAA+AGG - chr3.4:64796832-64796851 None:intergenic 30.0%
CATAAGAAGGTTTCTTTGAT+GGG + chr3.4:64794859-64794878 MS.gene05124:CDS 30.0%
CATGTTTAAACGAGAAACAA+AGG - chr3.4:64797799-64797818 None:intergenic 30.0%
CCATGTATAGAAGACTTAAT+AGG + chr3.4:64797092-64797111 MS.gene05124:intron 30.0%
CCTATTAAGTCTTCTATACA+TGG - chr3.4:64797095-64797114 None:intergenic 30.0%
CGACAATATATAGGAAAAAG+GGG - chr3.4:64796830-64796849 None:intergenic 30.0%
CTAAAATAAGCCAATCCAAA+CGG + chr3.4:64795605-64795624 MS.gene05124:intron 30.0%
CTAGATGAGCTTAATAATGA+AGG + chr3.4:64796979-64796998 MS.gene05124:CDS 30.0%
CTATCCATCATAACTATTGT+TGG + chr3.4:64797922-64797941 MS.gene05124:intron 30.0%
CTGCTGCAACTTTAAATTAT+AGG - chr3.4:64797979-64797998 None:intergenic 30.0%
GAGTAAATATCATGAAGTGA+AGG - chr3.4:64793958-64793977 None:intergenic 30.0%
GATAAACTAAGAACCAAGTA+GGG - chr3.4:64795632-64795651 None:intergenic 30.0%
GATATTGATATGCTTAAAGG+TGG - chr3.4:64796870-64796889 None:intergenic 30.0%
GATTTGCAAAATGGAAATGT+AGG - chr3.4:64797516-64797535 None:intergenic 30.0%
GCAAATGTTTAGGAATCAAA+CGG - chr3.4:64797054-64797073 None:intergenic 30.0%
GCATAAATTTACCTGGAAAA+GGG - chr3.4:64796684-64796703 None:intergenic 30.0%
GGATGTTTACATTTATTGCT+TGG + chr3.4:64796775-64796794 MS.gene05124:intron 30.0%
GGGTGTAAAATAATTGTAGA+TGG + chr3.4:64792667-64792686 MS.gene05124:intron 30.0%
GTATACTAAGTAACAACTAG+TGG + chr3.4:64794588-64794607 MS.gene05124:intron 30.0%
GTCAATATAAAAGTTGTACG+TGG - chr3.4:64796386-64796405 None:intergenic 30.0%
GTCCAATGTCAATCTTTAAA+GGG - chr3.4:64792825-64792844 None:intergenic 30.0%
TAAGCATTAGAAGATATGAG+GGG - chr3.4:64797553-64797572 None:intergenic 30.0%
TACTGCTATTATCTTATGCT+AGG + chr3.4:64795141-64795160 MS.gene05124:intron 30.0%
TAGCTGACACTAAAGAATAA+GGG - chr3.4:64797834-64797853 None:intergenic 30.0%
TATCAAGATATCAGTGACAT+TGG - chr3.4:64794306-64794325 None:intergenic 30.0%
TATCCAACACGACAATATAT+AGG - chr3.4:64796839-64796858 None:intergenic 30.0%
TCACAACAATATCAACCATT+GGG + chr3.4:64794664-64794683 MS.gene05124:intron 30.0%
TCATAAGAAGGTTTCTTTGA+TGG + chr3.4:64794858-64794877 MS.gene05124:CDS 30.0%
TCTTATATGATGTGTACAGA+TGG + chr3.4:64793369-64793388 MS.gene05124:intron 30.0%
TGCATAAATTTACCTGGAAA+AGG - chr3.4:64796685-64796704 None:intergenic 30.0%
TTAAGATGGTTAAAATACCC+TGG + chr3.4:64794130-64794149 MS.gene05124:intron 30.0%
TTACATTTATTGCTTGGAGT+AGG + chr3.4:64796781-64796800 MS.gene05124:intron 30.0%
TTACTGTTTAATAGTGGTAG+TGG + chr3.4:64792930-64792949 MS.gene05124:intron 30.0%
TTAGCTGACACTAAAGAATA+AGG - chr3.4:64797835-64797854 None:intergenic 30.0%
TTGCAATTTCTCTTCATTCA+GGG + chr3.4:64797357-64797376 MS.gene05124:intron 30.0%
TTTCCTATATATTGTCGTGT+TGG + chr3.4:64796833-64796852 MS.gene05124:intron 30.0%
TTTGCAATTTCTCTTCATTC+AGG + chr3.4:64797356-64797375 MS.gene05124:intron 30.0%
! AATATCTTCTTTTGCACTAG+AGG - chr3.4:64795230-64795249 None:intergenic 30.0%
! ATTACATTTTTCTGTTCTCC+TGG + chr3.4:64795096-64795115 MS.gene05124:intron 30.0%
! CCCCTTTAAGAATTTATAGA+AGG + chr3.4:64797427-64797446 MS.gene05124:intron 30.0%
! CGAGCAGAAATAATTTTATG+TGG + chr3.4:64797741-64797760 MS.gene05124:intron 30.0%
! GTCTTTGCATAGTTTTCATT+AGG + chr3.4:64796753-64796772 MS.gene05124:intron 30.0%
! TCCCCTAATCAATTTTTATG+TGG + chr3.4:64793033-64793052 MS.gene05124:intron 30.0%
! TGACTATTTTCGTGTTTACA+AGG + chr3.4:64794563-64794582 MS.gene05124:CDS 30.0%
! TGGGAAAGTTTAGAATACAA+AGG + chr3.4:64795321-64795340 MS.gene05124:intron 30.0%
! TTCTCATTTTCTGTCTCTTT+TGG + chr3.4:64792439-64792458 MS.gene05124:intron 30.0%
!! AATCAAGCTTTGATAGTGTA+TGG - chr3.4:64794698-64794717 None:intergenic 30.0%
!!! TAAAGGGCATTTTTCTTTGA+TGG - chr3.4:64792809-64792828 None:intergenic 30.0%
!!! TCTCTTATTTTCTTCTTACC+AGG + chr3.4:64792530-64792549 MS.gene05124:intron 30.0%
AAAGTCATCGTTCAAAGTGA+AGG - chr3.4:64792740-64792759 None:intergenic 35.0%
AAATGGATGTCTTATGGCAA+CGG + chr3.4:64792581-64792600 MS.gene05124:CDS 35.0%
AAATTCCCTTCTTCCAAAGT+AGG - chr3.4:64792716-64792735 None:intergenic 35.0%
AAATTTACCTGGAAAAGGGT+GGG - chr3.4:64796680-64796699 None:intergenic 35.0%
AAGAGACAGAAAATGAGAAC+TGG - chr3.4:64792438-64792457 None:intergenic 35.0%
AAGATATTAATGTTGTGCGG+TGG + chr3.4:64795242-64795261 MS.gene05124:CDS 35.0%
AATCATGTAGCATTCTGCAT+TGG - chr3.4:64793780-64793799 None:intergenic 35.0%
AATGATGTCTTTATTGCGTG+TGG + chr3.4:64793728-64793747 MS.gene05124:intron 35.0%
ACTAACGAAGTTTGCATTCA+GGG - chr3.4:64797268-64797287 None:intergenic 35.0%
ACTACTGTTTCAGATGACTT+TGG + chr3.4:64794343-64794362 MS.gene05124:intron 35.0%
AGAGAGGATATGAGAAAAGT+GGG - chr3.4:64796134-64796153 None:intergenic 35.0%
AGAGGGTAAAAATGTCAAGA+AGG - chr3.4:64793192-64793211 None:intergenic 35.0%
AGATATTAATGTTGTGCGGT+GGG + chr3.4:64795243-64795262 MS.gene05124:CDS 35.0%
AGCTGACACTAAAGAATAAG+GGG - chr3.4:64797833-64797852 None:intergenic 35.0%
AGTAGACTTAATGCATGTGT+TGG + chr3.4:64793932-64793951 MS.gene05124:intron 35.0%
AGTGCTATGAAAACTCATGT+GGG - chr3.4:64793588-64793607 None:intergenic 35.0%
ATACTGAATTATAGGGAGAG+AGG - chr3.4:64792875-64792894 None:intergenic 35.0%
ATCATACACCAATGTTCTCA+AGG + chr3.4:64794979-64794998 MS.gene05124:CDS 35.0%
ATTCATCAGGAATCATGCTT+AGG - chr3.4:64795072-64795091 None:intergenic 35.0%
CATAGAAGTCAAGAGCAATA+AGG + chr3.4:64795403-64795422 MS.gene05124:intron 35.0%
CATGATGAAAGATCAGAACT+GGG - chr3.4:64794032-64794051 None:intergenic 35.0%
CCATTCTATACAACATAAGC+AGG - chr3.4:64795918-64795937 None:intergenic 35.0%
CCTGCTTATGTTGTATAGAA+TGG + chr3.4:64795915-64795934 MS.gene05124:intron 35.0%
CTGCGTTTACTGTTTAATAG+TGG + chr3.4:64792924-64792943 MS.gene05124:intron 35.0%
GAAATAACAAGGACAATACC+AGG - chr3.4:64795117-64795136 None:intergenic 35.0%
GAGAAGATCATACTGATATG+TGG - chr3.4:64793689-64793708 None:intergenic 35.0%
GATCGTCTAGCATAATTACT+TGG + chr3.4:64796551-64796570 MS.gene05124:intron 35.0%
GGAACTGGATAAAAGACTAA+AGG - chr3.4:64793008-64793027 None:intergenic 35.0%
GGAAGAATCAATCACTTTGA+TGG - chr3.4:64793329-64793348 None:intergenic 35.0%
GGATGTAACTAACCGTAATA+TGG - chr3.4:64792417-64792436 None:intergenic 35.0%
GGTCCAATGTCAATCTTTAA+AGG - chr3.4:64792826-64792845 None:intergenic 35.0%
GGTTCTTAGTTTATCTCCTA+GGG + chr3.4:64795637-64795656 MS.gene05124:intron 35.0%
GTCACAACAATATCAACCAT+TGG + chr3.4:64794663-64794682 MS.gene05124:intron 35.0%
GTTGCAATCTGGAAAACATA+AGG + chr3.4:64795282-64795301 MS.gene05124:CDS 35.0%
TAAATTTACCTGGAAAAGGG+TGG - chr3.4:64796681-64796700 None:intergenic 35.0%
TAAGCAGGTGAATACTTTGT+AGG - chr3.4:64795903-64795922 None:intergenic 35.0%
TACTGAATTATAGGGAGAGA+GGG - chr3.4:64792874-64792893 None:intergenic 35.0%
TACTGTGTGTGATTCATTAC+AGG + chr3.4:64795943-64795962 MS.gene05124:intron 35.0%
TAGAGAGGATATGAGAAAAG+TGG - chr3.4:64796135-64796154 None:intergenic 35.0%
TATGGTAGGAGAATTGTTGT+AGG + chr3.4:64793814-64793833 MS.gene05124:intron 35.0%
TCAAACTCAGAATCTTGTTG+TGG - chr3.4:64792378-64792397 None:intergenic 35.0%
TGGTTCTTAGTTTATCTCCT+AGG + chr3.4:64795636-64795655 MS.gene05124:intron 35.0%
TGTATGGTAAATAGACCCAA+TGG - chr3.4:64794682-64794701 None:intergenic 35.0%
TGTTAATTACCCGTAGCATA+TGG + chr3.4:64793986-64794005 MS.gene05124:intron 35.0%
TGTTCAATACCATATGCTAC+GGG - chr3.4:64793998-64794017 None:intergenic 35.0%
TTATGACGAGACTTTACTGA+TGG + chr3.4:64796424-64796443 MS.gene05124:intron 35.0%
TTATTGGGTGAAACTCATGT+GGG + chr3.4:64793521-64793540 MS.gene05124:intron 35.0%
TTGATTTCATGTTCTGTCCA+GGG + chr3.4:64794823-64794842 MS.gene05124:intron 35.0%
TTGTCGTGTTGGATAAGAAA+AGG + chr3.4:64796844-64796863 MS.gene05124:intron 35.0%
TTGTGCCTACAAAAAGGATT+AGG - chr3.4:64796030-64796049 None:intergenic 35.0%
TTTATTGGGTGAAACTCATG+TGG + chr3.4:64793520-64793539 MS.gene05124:intron 35.0%
! AATCAGCGTTTTCTTTTTCC+AGG + chr3.4:64794954-64794973 MS.gene05124:intron 35.0%
! AATCCTTTTTGTAGGCACAA+GGG + chr3.4:64796030-64796049 MS.gene05124:intron 35.0%
! ATCAATCACTTTGATGGCTA+TGG - chr3.4:64793323-64793342 None:intergenic 35.0%
! CAAACTCAGAATCTTGTTGT+GGG - chr3.4:64792377-64792396 None:intergenic 35.0%
! CTCTTTGGAAATTGTCAGAT+AGG + chr3.4:64796513-64796532 MS.gene05124:intron 35.0%
! GGAAAAAGAAAACGCTGATT+AGG - chr3.4:64794954-64794973 None:intergenic 35.0%
! GTCTTCCTAATCCTTTTTGT+AGG + chr3.4:64796022-64796041 MS.gene05124:intron 35.0%
! GTTTTCGGATGTACACAAAA+TGG - chr3.4:64796344-64796363 None:intergenic 35.0%
! TAATCCTTTTTGTAGGCACA+AGG + chr3.4:64796029-64796048 MS.gene05124:intron 35.0%
! TACATTGTTTGGTAGCAGAA+TGG + chr3.4:64797602-64797621 MS.gene05124:intron 35.0%
! TATGACTATTTTCATTGCCC+TGG - chr3.4:64794843-64794862 None:intergenic 35.0%
! TGCCCTTTAAAGATTGACAT+TGG + chr3.4:64792820-64792839 MS.gene05124:CDS 35.0%
! TTTTGTGTACATCCGAAAAC+AGG + chr3.4:64796344-64796363 MS.gene05124:CDS 35.0%
!! AAATGAGTGTTGCTTGACAA+CGG + chr3.4:64794261-64794280 MS.gene05124:intron 35.0%
!! ATAGCAGCATCGACATAATT+TGG - chr3.4:64797858-64797877 None:intergenic 35.0%
!! CATGCTTAATATTTTTGCCG+AGG + chr3.4:64794048-64794067 MS.gene05124:intron 35.0%
!! TTGTTGGTAATGAATACTGC+AGG + chr3.4:64797938-64797957 MS.gene05124:intron 35.0%
AAAATCAACTCCCTCTCAAC+TGG - chr3.4:64793112-64793131 None:intergenic 40.0%
AAAGCGTAACTGAGTTTCCA+AGG - chr3.4:64797639-64797658 None:intergenic 40.0%
AACATTGGTGTATGATGTCC+TGG - chr3.4:64794975-64794994 None:intergenic 40.0%
AAGATATCAGTGACATTGGG+TGG - chr3.4:64794302-64794321 None:intergenic 40.0%
AAGCGTAACTGAGTTTCCAA+GGG - chr3.4:64797638-64797657 None:intergenic 40.0%
ACATTACTCTACAACCTTCC+AGG - chr3.4:64794151-64794170 None:intergenic 40.0%
ACGCAAATTACTACCTCTCA+AGG - chr3.4:64793350-64793369 None:intergenic 40.0%
ACTAACGGAGTCTACATTCA+GGG - chr3.4:64797300-64797319 None:intergenic 40.0%
AGTCAAAGAACTCCATAGGT+TGG + chr3.4:64797997-64798016 MS.gene05124:CDS 40.0%
AGTTTATCTCCTAGGGTCTA+GGG + chr3.4:64795644-64795663 MS.gene05124:intron 40.0%
ATCTGATCCTGAAGATCACA+AGG - chr3.4:64794098-64794117 None:intergenic 40.0%
ATTGTAGATGGGAAACATCC+TGG + chr3.4:64792679-64792698 MS.gene05124:intron 40.0%
CATTACTCTACAACCTTCCA+GGG - chr3.4:64794150-64794169 None:intergenic 40.0%
CATTAGAAGATATGAGGGGA+TGG - chr3.4:64797549-64797568 None:intergenic 40.0%
CATTTATTGCTTGGAGTAGG+AGG + chr3.4:64796784-64796803 MS.gene05124:intron 40.0%
CTTCATTCCTTGTGATCTTC+AGG + chr3.4:64794088-64794107 MS.gene05124:intron 40.0%
CTTCTGAACTTAGGGGAAAA+TGG + chr3.4:64795188-64795207 MS.gene05124:CDS 40.0%
GACTAACGAAGTTTGCATTC+AGG - chr3.4:64797269-64797288 None:intergenic 40.0%
GAGCTGTAGTGTGTACATTT+CGG + chr3.4:64793839-64793858 MS.gene05124:intron 40.0%
GAGTGCTATGAAAACTCATG+TGG - chr3.4:64793589-64793608 None:intergenic 40.0%
GATGGTTAAAATACCCTGGA+AGG + chr3.4:64794134-64794153 MS.gene05124:intron 40.0%
GATTAGGGGAAAAATGGAAC+TGG - chr3.4:64793023-64793042 None:intergenic 40.0%
GCATGATGAAAGATCAGAAC+TGG - chr3.4:64794033-64794052 None:intergenic 40.0%
GTGTTCCTATTGACCCAAAT+CGG + chr3.4:64796627-64796646 MS.gene05124:CDS 40.0%
GTTTGTCAAGGACTAGGATT+TGG + chr3.4:64794611-64794630 MS.gene05124:intron 40.0%
TAGTGGTCACTAGAAGCAAT+AGG + chr3.4:64792947-64792966 MS.gene05124:intron 40.0%
TAGTTTATCTCCTAGGGTCT+AGG + chr3.4:64795643-64795662 MS.gene05124:intron 40.0%
TCAAAACTTACTCGCTACTG+AGG + chr3.4:64795030-64795049 MS.gene05124:CDS 40.0%
TCAGGGACTAAAGTGACTAA+CGG - chr3.4:64797424-64797405 None:intergenic 40.0%
TGGCATGAAAGATCATAGAG+AGG - chr3.4:64796150-64796169 None:intergenic 40.0%
TTCATTGTTGGGTGTGTGAT+GGG + chr3.4:64794407-64794426 MS.gene05124:CDS 40.0%
TTGAGAGCTGATGTTAATGG+TGG + chr3.4:64797003-64797022 MS.gene05124:CDS 40.0%
! AGCTGTTGCTTCTGAACTTA+GGG + chr3.4:64795180-64795199 MS.gene05124:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+CGG + chr3.4:64797222-64797241 MS.gene05124:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG - chr3.4:64797241-64797222 None:intergenic 40.0%
! ATCAGTCCTACTTTGGAAGA+AGG + chr3.4:64792707-64792726 MS.gene05124:CDS 40.0%
! GTGATTGATTCTTCCTTGAG+AGG + chr3.4:64793334-64793353 MS.gene05124:CDS 40.0%
! GTTGATTTCATGTTCTGTCC+AGG + chr3.4:64794822-64794841 MS.gene05124:intron 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG - chr3.4:64797240-64797221 None:intergenic 40.0%
! TCAGTCCTACTTTGGAAGAA+GGG + chr3.4:64792708-64792727 MS.gene05124:CDS 40.0%
! TGGGTCTCAAACTTTGGAAA+TGG - chr3.4:64793569-64793588 None:intergenic 40.0%
! TTGATGGCTATGGTCATCAA+TGG - chr3.4:64793313-64793332 None:intergenic 40.0%
!! AACAACTAGTGGGTTTGTCA+AGG + chr3.4:64794599-64794618 MS.gene05124:intron 40.0%
!! ACGAAGAGGTGTTCATTGTT+GGG + chr3.4:64794396-64794415 MS.gene05124:CDS 40.0%
!! AGTCTGCTTACTGATTTGTG+TGG + chr3.4:64792646-64792665 MS.gene05124:intron 40.0%
!! CAAGGGCATTGTTGTAAGAT+TGG - chr3.4:64792774-64792793 None:intergenic 40.0%
!! GTCTGCTTACTGATTTGTGT+GGG + chr3.4:64792647-64792666 MS.gene05124:intron 40.0%
!! TTGGTAATGAATACTGCAGG+AGG + chr3.4:64797941-64797960 MS.gene05124:intron 40.0%
AAGAGCAATAAGGGCCTGTT+TGG + chr3.4:64795413-64795432 MS.gene05124:intron 45.0%
AAGTAGACACAGTCACCTAG+TGG + chr3.4:64793637-64793656 MS.gene05124:intron 45.0%
ACCTTTGCAAAAAGCCTGCA+AGG + chr3.4:64797678-64797697 MS.gene05124:CDS 45.0%
ACTTTAGTCCCTGAATCGGA+AGG + chr3.4:64797226-64797245 MS.gene05124:intron 45.0%
ATGAGGGGATGGCAATGAAA+AGG - chr3.4:64797538-64797557 None:intergenic 45.0%
ATGCAAAGACTTGAGCCAGA+GGG - chr3.4:64796743-64796762 None:intergenic 45.0%
ATGTCTTCACTCCAGTTGAG+AGG + chr3.4:64793098-64793117 MS.gene05124:CDS 45.0%
ATGTGGTTCAGCCTGCAAAA+AGG + chr3.4:64793050-64793069 MS.gene05124:intron 45.0%
ATTGCAAAACAGTCCCTGCA+TGG - chr3.4:64797344-64797363 None:intergenic 45.0%
CAACCCTTGTGCCTACAAAA+AGG - chr3.4:64796036-64796055 None:intergenic 45.0%
CACATACTCTGGGTCTATAG+TGG + chr3.4:64794373-64794392 MS.gene05124:CDS 45.0%
CAGCAGTCAAAGAACTCCAT+AGG + chr3.4:64797993-64798012 MS.gene05124:CDS 45.0%
CCTAGCAACAACAGTGATTC+AGG - chr3.4:64793876-64793895 None:intergenic 45.0%
CCTGAATCACTGTTGTTGCT+AGG + chr3.4:64793873-64793892 MS.gene05124:intron 45.0%
CTCAAGACTTACGCCAAGAA+AGG - chr3.4:64794898-64794917 None:intergenic 45.0%
CTCATGTGGGTCTCAAACTT+TGG - chr3.4:64793575-64793594 None:intergenic 45.0%
CTGATGTTTGCTTGGATTGC+TGG + chr3.4:64793287-64793306 MS.gene05124:CDS 45.0%
CTTTAGTCCCTGAATCGGAA+GGG + chr3.4:64797227-64797246 MS.gene05124:intron 45.0%
GACTAACGGAGTCTACATTC+AGG - chr3.4:64797301-64797320 None:intergenic 45.0%
GATGTCAGATACTGCTGCAA+GGG + chr3.4:64793262-64793281 MS.gene05124:CDS 45.0%
GCATAAGGAAACAGCTTTCC+TGG - chr3.4:64792551-64792570 None:intergenic 45.0%
GGCAGAGTAAACTTATGCCA+AGG - chr3.4:64793759-64793778 None:intergenic 45.0%
GGCTTGAGAGCTGATGTTAA+TGG + chr3.4:64797000-64797019 MS.gene05124:CDS 45.0%
GGGGAAAATGGCAAGACAAT+AGG + chr3.4:64795200-64795219 MS.gene05124:CDS 45.0%
GTTCATTGTTGGGTGTGTGA+TGG + chr3.4:64794406-64794425 MS.gene05124:CDS 45.0%
TACTGCAGGAGGAGATAGAA+AGG + chr3.4:64797952-64797971 MS.gene05124:intron 45.0%
TACTTACCCCAGGCTAGATA+TGG + chr3.4:64796088-64796107 MS.gene05124:CDS 45.0%
TATGCAAAGACTTGAGCCAG+AGG - chr3.4:64796744-64796763 None:intergenic 45.0%
TATTGCGTGTGGTCATTCCT+TGG + chr3.4:64793739-64793758 MS.gene05124:intron 45.0%
TCCCTGAAATTGACCATGCA+GGG + chr3.4:64797328-64797347 MS.gene05124:intron 45.0%
TCCCTGCATGGTCAATTTCA+GGG - chr3.4:64797332-64797351 None:intergenic 45.0%
TGATGTCAGATACTGCTGCA+AGG + chr3.4:64793261-64793280 MS.gene05124:CDS 45.0%
TGCAAGCAGTTGTTGCAATC+TGG + chr3.4:64795271-64795290 MS.gene05124:CDS 45.0%
TGCTGCTCTTCATCCTTTCT+TGG + chr3.4:64794882-64794901 MS.gene05124:CDS 45.0%
TGGCTTCAAGCACATACTCT+GGG + chr3.4:64794363-64794382 MS.gene05124:CDS 45.0%
TGTCTTCACTCCAGTTGAGA+GGG + chr3.4:64793099-64793118 MS.gene05124:CDS 45.0%
TGTTCTGCTATACTTACCCC+AGG + chr3.4:64796078-64796097 MS.gene05124:CDS 45.0%
TTCAGAAGCAACAGCTGCAA+AGG - chr3.4:64795176-64795195 None:intergenic 45.0%
TTGGCTTCAAGCACATACTC+TGG + chr3.4:64794362-64794381 MS.gene05124:CDS 45.0%
! ACCTTGCAGGCTTTTTGCAA+AGG - chr3.4:64797682-64797701 None:intergenic 45.0%
! CAGCTGTTGCTTCTGAACTT+AGG + chr3.4:64795179-64795198 MS.gene05124:intron 45.0%
! GCTGTTGCTTCTGAACTTAG+GGG + chr3.4:64795181-64795200 MS.gene05124:intron 45.0%
! GTTACATCGACTGTGTAGAC+AGG - chr3.4:64792847-64792866 None:intergenic 45.0%
! TGGGTCTCGTCACTTTATGT+GGG + chr3.4:64793540-64793559 MS.gene05124:intron 45.0%
! TGTTTGGTAGCAGAATGGAG+TGG + chr3.4:64797607-64797626 MS.gene05124:intron 45.0%
!! GACGAAGAGGTGTTCATTGT+TGG + chr3.4:64794395-64794414 MS.gene05124:CDS 45.0%
!! GATGGAGTTTTCGAGCTCAA+GGG - chr3.4:64792791-64792810 None:intergenic 45.0%
!! TAGTGGGTTTGTCAAGGACT+AGG + chr3.4:64794605-64794624 MS.gene05124:intron 45.0%
!! TGATGGAGTTTTCGAGCTCA+AGG - chr3.4:64792792-64792811 None:intergenic 45.0%
!!! TTCTTTTTTTTTTTTTTTTT+TGG - chr3.4:64794728-64794747 None:intergenic 5.0%
AAGTAGGACTGATCACAGCC+AGG - chr3.4:64792700-64792719 None:intergenic 50.0%
ACAGACCTCCATATCTAGCC+TGG - chr3.4:64796099-64796118 None:intergenic 50.0%
AGAACCAAGTAGGGTCCGTT+TGG - chr3.4:64795623-64795642 None:intergenic 50.0%
AGACCTCCATATCTAGCCTG+GGG - chr3.4:64796097-64796116 None:intergenic 50.0%
CAAGTAGGGTCCGTTTGGAT+TGG - chr3.4:64795618-64795637 None:intergenic 50.0%
CAATCCAAACGGACCCTACT+TGG + chr3.4:64795616-64795635 MS.gene05124:intron 50.0%
CAGACCTCCATATCTAGCCT+GGG - chr3.4:64796098-64796117 None:intergenic 50.0%
CTTTAGTCCCTGAATGGGAG+AGG - chr3.4:64797398-64797417 None:intergenic 50.0%
GAATGGAGTGGAACTTCCCT+TGG + chr3.4:64797619-64797638 MS.gene05124:intron 50.0%
GACGAATCCCTTCCGATTCA+GGG - chr3.4:64797237-64797256 None:intergenic 50.0%
GACGAATCCTCTCCCATTCA+GGG + chr3.4:64797388-64797407 MS.gene05124:intron 50.0%
GGATGTCTTATGGCAACGGT+AGG + chr3.4:64792585-64792604 MS.gene05124:intron 50.0%
GGCTGTGATCAGTCCTACTT+TGG + chr3.4:64792700-64792719 MS.gene05124:CDS 50.0%
GTCCCTGAAATTGACCATGC+AGG + chr3.4:64797327-64797346 MS.gene05124:intron 50.0%
GTCCCTGCATGGTCAATTTC+AGG - chr3.4:64797333-64797352 None:intergenic 50.0%
TGACGAATCCCTTCCGATTC+AGG - chr3.4:64797238-64797257 None:intergenic 50.0%
TGACGAATCCTCTCCCATTC+AGG + chr3.4:64797387-64797406 MS.gene05124:intron 50.0%
TTACCCCAGGCTAGATATGG+AGG + chr3.4:64796091-64796110 MS.gene05124:CDS 50.0%
! GCATAGGCATGCCTTTTTGC+AGG - chr3.4:64793064-64793083 None:intergenic 50.0%
! GGGTCTCGTCACTTTATGTG+GGG + chr3.4:64793541-64793560 MS.gene05124:intron 50.0%
! GTGGGTCTCGTCACTTTATG+TGG + chr3.4:64793539-64793558 MS.gene05124:intron 50.0%
! TCTCTTTCATGGTCGGCTCT+AGG + chr3.4:64793222-64793241 MS.gene05124:intron 50.0%
! TGTGTGATGGGAAGGCTAGA+AGG + chr3.4:64794419-64794438 MS.gene05124:CDS 50.0%
! TTGTTGGGTGTGTGATGGGA+AGG + chr3.4:64794411-64794430 MS.gene05124:CDS 50.0%
!! CAAACTCGTCGCACCGATTT+GGG - chr3.4:64796643-64796662 None:intergenic 50.0%
!! CAAGGGTGCTGATGTTTGCT+TGG + chr3.4:64793279-64793298 MS.gene05124:CDS 50.0%
!! CTAGGATTTGGTGCAGTCGA+TGG + chr3.4:64794623-64794642 MS.gene05124:intron 50.0%
!! TCAAACTCGTCGCACCGATT+TGG - chr3.4:64796644-64796663 None:intergenic 50.0%
!! TCGCACCGATTTGGGTCAAT+AGG - chr3.4:64796635-64796654 None:intergenic 50.0%
!! TGGGTCTATAGTGGACGAAG+AGG + chr3.4:64794382-64794401 MS.gene05124:CDS 50.0%
AGAAACTGGCCCTAGACCCT+AGG - chr3.4:64795656-64795675 None:intergenic 55.0%
GCAACAGAGATGGTTCCCTC+TGG + chr3.4:64796725-64796744 MS.gene05124:intron 55.0%
! CACAGTACCCACCCTTTTCC+AGG + chr3.4:64796670-64796689 MS.gene05124:CDS 55.0%
! CTGGAAAAGGGTGGGTACTG+TGG - chr3.4:64796672-64796691 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 64792369 64798022 64792369 ID=MS.gene05124
chr3.4 mRNA 64792369 64798022 64792369 ID=MS.gene05124.t1;Parent=MS.gene05124
chr3.4 exon 64792369 64792423 64792369 ID=MS.gene05124.t1.exon1;Parent=MS.gene05124.t1
chr3.4 CDS 64792369 64792423 64792369 ID=cds.MS.gene05124.t1;Parent=MS.gene05124.t1
chr3.4 exon 64792552 64792602 64792552 ID=MS.gene05124.t1.exon2;Parent=MS.gene05124.t1
chr3.4 CDS 64792552 64792602 64792552 ID=cds.MS.gene05124.t1;Parent=MS.gene05124.t1
chr3.4 exon 64792686 64792861 64792686 ID=MS.gene05124.t1.exon3;Parent=MS.gene05124.t1
chr3.4 CDS 64792686 64792861 64792686 ID=cds.MS.gene05124.t1;Parent=MS.gene05124.t1
chr3.4 exon 64793061 64793138 64793061 ID=MS.gene05124.t1.exon4;Parent=MS.gene05124.t1
chr3.4 CDS 64793061 64793138 64793061 ID=cds.MS.gene05124.t1;Parent=MS.gene05124.t1
chr3.4 exon 64793244 64793355 64793244 ID=MS.gene05124.t1.exon5;Parent=MS.gene05124.t1
chr3.4 CDS 64793244 64793355 64793244 ID=cds.MS.gene05124.t1;Parent=MS.gene05124.t1
chr3.4 exon 64794356 64794440 64794356 ID=MS.gene05124.t1.exon6;Parent=MS.gene05124.t1
chr3.4 CDS 64794356 64794440 64794356 ID=cds.MS.gene05124.t1;Parent=MS.gene05124.t1
chr3.4 exon 64794533 64794584 64794533 ID=MS.gene05124.t1.exon7;Parent=MS.gene05124.t1
chr3.4 CDS 64794533 64794584 64794533 ID=cds.MS.gene05124.t1;Parent=MS.gene05124.t1
chr3.4 exon 64794844 64794905 64794844 ID=MS.gene05124.t1.exon8;Parent=MS.gene05124.t1
chr3.4 CDS 64794844 64794905 64794844 ID=cds.MS.gene05124.t1;Parent=MS.gene05124.t1
chr3.4 exon 64794976 64795091 64794976 ID=MS.gene05124.t1.exon9;Parent=MS.gene05124.t1
chr3.4 CDS 64794976 64795091 64794976 ID=cds.MS.gene05124.t1;Parent=MS.gene05124.t1
chr3.4 exon 64795182 64795303 64795182 ID=MS.gene05124.t1.exon10;Parent=MS.gene05124.t1
chr3.4 CDS 64795182 64795303 64795182 ID=cds.MS.gene05124.t1;Parent=MS.gene05124.t1
chr3.4 exon 64796044 64796112 64796044 ID=MS.gene05124.t1.exon11;Parent=MS.gene05124.t1
chr3.4 CDS 64796044 64796112 64796044 ID=cds.MS.gene05124.t1;Parent=MS.gene05124.t1
chr3.4 exon 64796308 64796365 64796308 ID=MS.gene05124.t1.exon12;Parent=MS.gene05124.t1
chr3.4 CDS 64796308 64796365 64796308 ID=cds.MS.gene05124.t1;Parent=MS.gene05124.t1
chr3.4 exon 64796618 64796691 64796618 ID=MS.gene05124.t1.exon13;Parent=MS.gene05124.t1
chr3.4 CDS 64796618 64796691 64796618 ID=cds.MS.gene05124.t1;Parent=MS.gene05124.t1
chr3.4 exon 64796976 64797024 64796976 ID=MS.gene05124.t1.exon14;Parent=MS.gene05124.t1
chr3.4 CDS 64796976 64797024 64796976 ID=cds.MS.gene05124.t1;Parent=MS.gene05124.t1
chr3.4 exon 64797620 64797699 64797620 ID=MS.gene05124.t1.exon15;Parent=MS.gene05124.t1
chr3.4 CDS 64797620 64797699 64797620 ID=cds.MS.gene05124.t1;Parent=MS.gene05124.t1
chr3.4 exon 64797960 64798022 64797960 ID=MS.gene05124.t1.exon16;Parent=MS.gene05124.t1
chr3.4 CDS 64797960 64798022 64797960 ID=cds.MS.gene05124.t1;Parent=MS.gene05124.t1
Gene Sequence

>MS.gene05124

ATGATCCCACAACAAGATTCTGAGTTTGATTCCAATTTTCTCAAACCATATTACGGTTAGTTACATCCAGTTCTCATTTTCTGTCTCTTTTGGTTTGTGCGTGTATAAAATTAGCTTAATTTTATTCGATTTGTTTTGTATTGTGTTTTAACCATACGTTTTCTCTTATTTTCTTCTTACCAGGAAAGCTGTTTCCTTATGCTGATATATTTAAATGGATGTCTTATGGCAACGGTAGGATTTATCGAACTCTTGCTTATGACGAATATGTTAAACGAGTCTGCTTACTGATTTGTGTGGGTGTAAAATAATTGTAGATGGGAAACATCCTGGCTGTGATCAGTCCTACTTTGGAAGAAGGGAATTTTCCTTCACTTTGAACGATGACTTTTATCTGCGCTTCCAATCTTACAACAATGCCCTTGAGCTCGAAAACTCCATCAAAGAAAAATGCCCTTTAAAGATTGACATTGGACCTGTCTACACAGTCGATGTAACATTTCCCTCTCTCCCTATAATTCAGTATTATTGTGCTTCAGTTTTGATATGATTTTTCTGCGTTTACTGTTTAATAGTGGTAGTGGTCACTAGAAGCAATAGGAAAGTTTTGTGAATAGTCATGAGTATTTTTTTTTTCCTTTAGTCTTTTATCCAGTTCCATTTTTCCCCTAATCAATTTTTATGTGGTTCAGCCTGCAAAAAGGCATGCCTATGCACAAAGTGATAATAATGTCTTCACTCCAGTTGAGAGGGAGTTGATTTTTGATATTGTAAGTTTTTCTGACTTGAGTCTCCTGCTGAAAGTTTTTAGATACTTTGACCTTCTTGACATTTTTACCCTCTTTTATTTTTTTCTCTTTCATGGTCGGCTCTAGGATATGACAGACTATGATGATGTCAGATACTGCTGCAAGGGTGCTGATGTTTGCTTGGATTGCTGGCCATTGATGACCATAGCCATCAAAGTGATTGATTCTTCCTTGAGAGGTAGTAATTTGCGTCTTATATGATGTGTACAGATGGTGCAGTGCTTGTCATTTATATTGTTCATTGAATAGAAGACTTAATTTTTAAAAAACAGGATGTAATCATTTCTTTTATAGAGAAATGCTAGGAACACTCTCTTTCTAACACTCTCTCTAACAATCTCTTTTATTGGGTGAAACTCATGTGGGTCTCGTCACTTTATGTGGGGATCCATTTCCAAAGTTTGAGACCCACATGAGTTTTCATAGCACTCCTCTCTTTTAAATAAATGAAAGAATTTGAAGTAGACACAGTCACCTAGTGGAAATACTCTTAAATAACATAAGTTCACCACATATCAGTATGATCTTCTCAATTCATAGCATATCAGATAATGATGTCTTTATTGCGTGTGGTCATTCCTTGGCATAAGTTTACTCTGCCAATGCAGAATGCTACATGATTCCTATTTGAATATTTATGGTAGGAGAATTGTTGTAGGCTGAGCTGTAGTGTGTACATTTCGGCATATGACTTGCCTGAATCACTGTTGTTGCTAGGAATTATGCTTTCAGCAATGCCATTATATCTGTTAAGAGTAGACTTAATGCATGTGTTGGCCTTCACTTCATGATATTTACTCTTATTTGATGTTAATTACCCGTAGCATATGGTATTGAACATTTGTTTTCATCCCAGTTCTGATCTTTCATCATGCTTAATATTTTTGCCGAGGATTGAGAATTTTACTCTCTTCATTCCTTGTGATCTTCAGGATCAGATGCTTAACTGAAATTAAGATGGTTAAAATACCCTGGAAGGTTGTAGAGTAATGTCTAACTTGCCCTAAAACCATCTATAATAATTAGATTGAGCCTATCTGGTCATTGAATTCATTGCACAACACACAGTTATAGCACAATATGAAATGAGTGTTGCTTGACAACGGCAATTGTAATCTTCTCCACCCAATGTCACTGATATCTTGATAATGAATTTTGTTTTGGAACTACTGTTTCAGATGACTTTGGCTTCAAGCACATACTCTGGGTCTATAGTGGACGAAGAGGTGTTCATTGTTGGGTGTGTGATGGGAAGGCTAGAAGGTGAGACACTAGACAGTCAAAAGTTTTAACTTTTACTTCATCTTCATGCACTGCGCACAATTAATTCAATTATATTATCTTTACTATTGCAGGTTGACTAATGAGCAAAGAGCTTCTGTTGCTGACTATTTTCGTGTTTACAAGGTAGTATACTAAGTAACAACTAGTGGGTTTGTCAAGGACTAGGATTTGGTGCAGTCGATGGTTGATATAGTCAGTGCAGTCACAACAATATCAACCATTGGGTCTATTTACCATACACTATCAAAGCTTGATTTCTTTGTCCAAAAAAAAAAAAAAAAAAGAAGTAGAAGTTAGAGCGACATAGACGCTTGAGTGAACACAATCTGAATCTGTTTGCCCATACTTGTATTAATGTTTGTTGATTTCATGTTCTGTCCAGGGCAATGAAAATAGTCATAAGAAGGTTTCTTTGATGGGTGCTGCTCTTCATCCTTTCTTGGCGTAAGTCTTGAGACAAATTATTAATTTATGATGCTTATTTCATCTCCTAATCAGCGTTTTCTTTTTCCAGGACATCATACACCAATGTTCTCAAGGACTATTTTGAGAAAGTACTGCTTACAAGTCAAAACTTACTCGCTACTGAGGAGAGATATGAGAAGATCCTAAGCATGATTCCTGATGAATGTACATTACATTTTTCTGTTCTCCTGGTATTGTCCTTGTTATTTCATTTTACTGCTATTATCTTATGCTAGGCATGTTTTACCTTTGCAGCTGTTGCTTCTGAACTTAGGGGAAAATGGCAAGACAATAGGCGTTCCTCTAGTGCAAAAGAAGATATTAATGTTGTGCGGTGGGAACAGTGCAAGCAGTTGTTGCAATCTGGAAAACATAAGGTATAAAATATTCTTTTTGGGAAAGTTTAGAATACAAAGGTAACAATGGCATTTTCTCTCTGCAATATTTGTACAAATAGTGGAAAACAGTTTAATGAGCATAGAAGTCAAGAGCAATAAGGGCCTGTTTGGATTGAGCTTATTTTGAGCTTATGAAAAAGAGCTTATGCAAATAATTAAGCTTTTATGTTAATTCATAAGATCTTACTAACCAAAGTTGTATATTCATAAGTTGTTTTTTCATAATCTACCTTAACAAGCATATAAATAATACATTAATGCTTATTTATTTGCATAAGCTCTAAAATAAGCCAATCCAAACGGACCCTACTTGGTTCTTAGTTTATCTCCTAGGGTCTAGGGCCAGTTTCTTATCTTTAGAGTATATCTCAAGATTAATTTCCATATTACTTGGTTAATATCATGATTTGTTTATTTATTTAAGATGAGGAGTCTTGTATTTCTATAAATAGGGCTAGTGTTTAGTTTTTTGTATCAAGCCTATTCTCAATTATATTACACCATAATCATATTTATTCTTATTCTTCTGTCTTTTATCTAACATCTCAATTTAACAATCTGGAAATTCTCGCTGACCTACAAAGTATTCACCTGCTTATGTTGTATAGAATGGTTGCATACTGTGTGTGATTCATTACAGGAAATCATACAAGATTTTCTGAAATAAGCATTATATGAGTTGCTATTTATTGTTAATGTCTTCCTAATCCTTTTTGTAGGCACAAGGGTTGCGTAGATGCGTTGAAGAGATTGTGTTCTGCTATACTTACCCCAGGCTAGATATGGAGGTCTGTCTATCAACTGCTCCCACTTTTCTCATATCCTCTCTATGATCTTTCATGCCATTAAGTTATTTTCATTTACGCACATTCATAATTCCCCCCAAATATGTATCTATATATCAAAGACCAATAATACTTTTGACTAGTTTTCAGTTTTCCAATCTAAATTTTTGCGTTTAACCAAGACTATTTATGTTTCAGGTTTCAAAACACATGAATCATTTGCTTAAAGCACCATTTTGTGTACATCCGAAAACAGGTTAGTATCAAATATGACCACGTACAACTTTTATATTGACTCAAGTTGTTGGGTTTCTTTATGACGAGACTTTACTGATGGCATCATAAGCTATTATTTTTCACCTATGATTTTTCAGACAGAAAACTGAAATATTAAATCTATCTTCTCTTTGGAAATTGTCAGATAGGTTCATTAGATAATTTGATCGTCTAGCATAATTACTTGGTTTGTTTAAGTGCATAATTACTTGGTAATTCTTCTTTATTCTAGGTCGTGTCTGTGTTCCTATTGACCCAAATCGGTGCGACGAGTTTGATCCTACCACAGTACCCACCCTTTTCCAGGTAAATTTATGCAACAATATATATTTTTTATTTGCAACAGAGATGGTTCCCTCTGGCTCAAGTCTTTGCATAGTTTTCATTAGGGATGTTTACATTTATTGCTTGGAGTAGGAGGCATTTGCATAAAAGCACTTGCCCCTTTTTCCTATATATTGTCGTGTTGGATAAGAAAAGGCCACCTTTAAGCATATCAATATCTTCTATTAGTATACTGTTTTCTGATAATATTTTCTAGTCATTTTATGTTTATGTGACTCCTGATATTGTGATTTGTAACATTGCAGCTTCTAGATGAGCTTAATAATGAAGGCTTGAGAGCTGATGTTAATGGTGGTATGTAGTTTTATACTTGAACAATCCCGTTTGATTCCTAAACATTTGCAATTTTTATTTGATTATGCCATGTATAGAAGACTTAATAGGGATATTGCATTTTTGGAAACACTGAGAATAGTTCTTTAACATTTTTCAAATTTCTACAAATATTGCATCTGTTTTCACTTTTGAAACATATTTAAGAATGGGGAATTAGTCACTTTAGTCCCTGAATCGGAAGGGATTCGTCATTTTAGTCCCTGAATGCAAACTTCGTTAGTCAATTTAGTCCCTGAATGTAGACTCCGTTAGTCACTTTAGTCCCTGAAATTGACCATGCAGGGACTGTTTTGCAATTTCTCTTCATTCAGGGACTAAAATGACGAATCCTCTCCCATTCAGGGACTAAAGTGACTAATTCCCCTTTAAGAATTTATAGAAGGCATTCTATAATGCTTAGTTTATAAGTGGAGATAAAAACAAGAAACAAAGGAAGTAAGTTGGTCCCTACATTTCCATTTTGCAAATCCTTTTCATTGCCATCCCCTCATATCTTCTAATGCTTATTGCATTTTGTCATTAAAAGTGATTTTGATACATTGTTTGGTAGCAGAATGGAGTGGAACTTCCCTTGGAAACTCAGTTACGCTTTTCAGATCGTCGTTCTTAGAACCTTTGCAAAAAGCCTGCAAGGTATGAAACATTTTTAAATTGTTTCTATAGTAAATTCTGATCGAGCAGAAATAATTTTATGTGGAGAATGCTAAAAAAATGCTAAAAATCACGATGCCTTTGTTTCTCGTTTAAACATGCACAGATTCTTCCCCTTATTCTTTAGTGTCAGCTAACCAAATTATGTCGATGCTGCTATTGTTAATAATTTGATAACAATATATAAATAAGACTCAGCAGTAACTATCCATCATAACTATTGTTGGTAATGAATACTGCAGGAGGAGATAGAAAGGTCCTATAATTTAAAGTTGCAGCAGTCAAAGAACTCCATAGGTTGGTAG

Protein sequence

>MS.gene05124.t1

MIPQQDSEFDSNFLKPYYGKLFPYADIFKWMSYGNDGKHPGCDQSYFGRREFSFTLNDDFYLRFQSYNNALELENSIKEKCPLKIDIGPVYTVDPAKRHAYAQSDNNVFTPVERELIFDIDMTDYDDVRYCCKGADVCLDCWPLMTIAIKVIDSSLRDDFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRASVADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKDYFEKVLLTSQNLLATEERYEKILSMIPDESVASELRGKWQDNRRSSSAKEDINVVRWEQCKQLLQSGKHKAQGLRRCVEEIVFCYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNRCDEFDPTTVPTLFQLLDELNNEGLRADVNGEWSGTSLGNSVTLFRSSFLEPLQKACKEEIERSYNLKLQQSKNSIGW