AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene066058

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066058.t1 MTR_1g085500 94.977 219 11 0 1 219 1 219 1.74e-152 422
MS.gene066058.t1 MTR_1g085140 70.500 200 59 0 19 218 20 219 1.01e-99 288
MS.gene066058.t1 MTR_7g111240 68.878 196 61 0 22 217 19 214 3.04e-94 275
MS.gene066058.t1 MTR_7g111240 68.878 196 58 1 22 217 19 211 4.13e-92 269
MS.gene066058.t1 MTR_2g019250 47.596 208 102 3 11 213 10 215 7.49e-60 187
MS.gene066058.t1 MTR_4g017040 47.115 208 103 3 11 213 10 215 1.03e-59 187
MS.gene066058.t1 MTR_1g079490 46.009 213 109 3 6 213 5 216 1.45e-59 187
MS.gene066058.t1 MTR_4g017050 47.115 208 103 3 11 213 10 215 1.47e-59 187
MS.gene066058.t1 MTR_5g046410 47.115 208 103 3 11 213 10 215 1.54e-59 186
MS.gene066058.t1 MTR_5g046430 47.115 208 103 3 11 213 10 215 1.54e-59 186
MS.gene066058.t1 MTR_4g017030 47.115 208 103 3 11 213 10 215 1.54e-59 186
MS.gene066058.t1 MTR_6g005330 47.393 211 104 4 8 213 6 214 6.35e-58 182
MS.gene066058.t1 MTR_6g005340 48.259 201 98 3 17 213 16 214 1.65e-57 181
MS.gene066058.t1 MTR_6g005360 48.259 201 98 3 17 213 16 214 2.85e-57 181
MS.gene066058.t1 MTR_6g005310 48.259 201 98 3 17 213 16 214 4.40e-57 180
MS.gene066058.t1 MTR_6g005380 49.010 202 95 4 8 203 6 205 3.82e-56 177
MS.gene066058.t1 MTR_1g023770 42.927 205 109 2 11 213 10 208 1.37e-55 176
MS.gene066058.t1 MTR_2g030855 44.898 196 103 2 20 213 19 211 4.84e-55 175
MS.gene066058.t1 MTR_1g112200 42.857 210 113 3 7 216 7 209 1.01e-54 174
MS.gene066058.t1 MTR_2g031270 43.216 199 107 3 18 213 17 212 1.53e-51 166
MS.gene066058.t1 MTR_6g005350 43.128 211 112 5 8 213 6 213 4.07e-51 165
MS.gene066058.t1 MTR_5g036570 43.077 195 110 1 22 215 26 220 2.87e-49 160
MS.gene066058.t1 MTR_1g060120 38.009 221 126 5 6 218 8 225 2.25e-48 158
MS.gene066058.t1 MTR_2g030895 43.860 171 93 2 46 213 7 177 1.86e-45 149
MS.gene066058.t1 MTR_2g030865 43.860 171 93 2 46 213 7 177 8.68e-45 147
MS.gene066058.t1 MTR_8g007300 42.703 185 102 3 6 188 10 192 2.47e-40 137
MS.gene066058.t1 MTR_8g020590 37.838 185 111 1 8 192 4 184 6.19e-38 131
MS.gene066058.t1 MTR_2g086620 39.394 198 96 6 19 211 23 201 1.06e-37 130
MS.gene066058.t1 MTR_2g086640 39.394 198 96 6 19 211 22 200 1.08e-37 130
MS.gene066058.t1 MTR_2g086630 39.394 198 96 6 19 211 23 201 1.46e-37 130
MS.gene066058.t1 MTR_8g020650 35.417 192 120 3 26 217 21 208 2.90e-36 127
MS.gene066058.t1 MTR_8g020630 34.673 199 126 3 19 217 14 208 3.10e-36 127
MS.gene066058.t1 MTR_2g031300 40.625 160 73 2 46 203 7 146 4.48e-35 122
MS.gene066058.t1 MTR_3g096330 37.864 206 122 4 9 210 561 764 4.74e-35 131
MS.gene066058.t1 MTR_2g036120 36.788 193 118 3 26 218 21 209 8.04e-35 123
MS.gene066058.t1 MTR_4g052770 43.284 134 73 2 79 211 71 202 1.29e-34 122
MS.gene066058.t1 MTR_2g045100 37.019 208 127 3 8 215 3 206 1.51e-34 122
MS.gene066058.t1 MTR_4g052780 43.284 134 73 2 79 211 71 202 1.98e-34 122
MS.gene066058.t1 MTR_3g019650 36.316 190 117 3 26 215 20 205 2.06e-34 122
MS.gene066058.t1 MTR_4g010340 38.942 208 109 8 9 213 8 200 3.78e-34 121
MS.gene066058.t1 MTR_8g020670 32.381 210 134 4 8 217 7 208 5.37e-34 121
MS.gene066058.t1 MTR_5g031460 33.175 211 131 4 8 215 3 206 1.18e-33 120
MS.gene066058.t1 MTR_3g019680 36.316 190 117 3 26 215 20 205 1.72e-33 119
MS.gene066058.t1 MTR_3g019710 35.500 200 119 4 19 215 14 206 3.02e-33 119
MS.gene066058.t1 MTR_2g041550 36.559 186 110 3 29 211 23 203 5.65e-33 118
MS.gene066058.t1 MTR_2g041570 34.300 207 129 3 6 212 5 204 2.23e-32 117
MS.gene066058.t1 MTR_2g041580 34.466 206 128 3 6 211 5 203 3.10e-32 116
MS.gene066058.t1 MTR_2g044040 34.135 208 129 4 8 215 7 206 6.26e-32 115
MS.gene066058.t1 MTR_0284s0010 34.518 197 125 3 19 215 14 206 1.07e-30 112
MS.gene066058.t1 MTR_8g020770 38.278 209 113 6 8 208 7 207 4.46e-30 110
MS.gene066058.t1 MTR_7g011340 35.450 189 118 4 27 215 22 206 1.38e-29 109
MS.gene066058.t1 MTR_8g020750 35.784 204 122 4 9 211 10 205 3.11e-29 108
MS.gene066058.t1 MTR_8g020763 36.047 172 107 3 42 213 17 185 7.18e-29 107
MS.gene066058.t1 MTR_8g020610 32.039 206 132 3 6 211 3 200 7.89e-28 105
MS.gene066058.t1 MTR_2g019780 32.227 211 134 6 5 213 4 207 2.52e-27 103
MS.gene066058.t1 MTR_8g020760 34.343 198 120 6 19 213 16 206 3.18e-26 100
MS.gene066058.t1 MTR_3g073170 33.155 187 117 5 28 213 26 205 9.33e-25 97.1
MS.gene066058.t1 MTR_3g019810 33.171 205 125 6 8 211 109 302 1.95e-24 98.6
MS.gene066058.t1 MTR_4g027415 40.650 123 71 2 27 149 22 142 1.54e-20 84.3
MS.gene066058.t1 MTR_3g019610 39.252 107 58 3 8 111 3 105 7.59e-15 68.6
MS.gene066058.t1 MTR_2g072560 36.842 114 67 2 8 121 7 115 3.60e-14 67.4
MS.gene066058.t1 MTR_2g030915 44.776 67 25 2 94 160 1 55 1.02e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066058.t1 AT3G62020 70.000 220 63 2 1 218 1 219 1.68e-108 311
MS.gene066058.t1 AT1G02335 65.403 211 73 0 8 218 9 219 6.83e-102 294
MS.gene066058.t1 AT1G09560 70.202 198 59 0 21 218 22 219 2.29e-99 288
MS.gene066058.t1 AT3G62020 74.863 183 43 2 38 218 9 190 2.01e-98 284
MS.gene066058.t1 AT5G26700 59.794 194 75 1 25 218 23 213 3.11e-86 254
MS.gene066058.t1 AT3G05930 53.425 219 101 1 1 218 1 219 2.21e-78 234
MS.gene066058.t1 AT1G18980 45.933 209 111 1 7 215 13 219 5.04e-64 198
MS.gene066058.t1 AT1G18970 46.411 209 110 1 7 215 13 219 2.10e-63 196
MS.gene066058.t1 AT5G38910 48.558 208 103 2 11 214 12 219 5.36e-62 193
MS.gene066058.t1 AT4G14630 50.000 198 94 2 21 213 24 221 2.36e-61 191
MS.gene066058.t1 AT5G39160 45.498 211 111 2 9 215 10 220 2.75e-61 191
MS.gene066058.t1 AT5G39190 45.498 211 111 2 9 215 10 220 4.73e-61 191
MS.gene066058.t1 AT5G39130 45.498 211 111 2 9 215 10 220 5.05e-61 191
MS.gene066058.t1 AT5G39150 45.972 211 109 2 8 213 8 218 7.40e-61 190
MS.gene066058.t1 AT5G38930 49.246 199 97 2 19 213 22 220 1.65e-60 189
MS.gene066058.t1 AT5G39180 45.972 211 109 2 8 213 8 218 2.40e-60 189
MS.gene066058.t1 AT5G39120 47.980 198 98 2 21 213 21 218 2.59e-60 189
MS.gene066058.t1 AT5G38940 48.980 196 96 2 22 213 25 220 3.46e-60 188
MS.gene066058.t1 AT3G05950 48.095 210 103 3 12 215 13 222 4.34e-60 188
MS.gene066058.t1 AT5G38940 48.980 196 96 2 22 213 49 244 4.50e-60 189
MS.gene066058.t1 AT5G39110 46.602 206 105 2 13 213 14 219 6.10e-60 187
MS.gene066058.t1 AT5G38960 48.000 200 99 3 21 215 24 223 1.79e-59 186
MS.gene066058.t1 AT3G04200 45.283 212 110 3 11 216 13 224 4.42e-59 186
MS.gene066058.t1 AT5G39160 43.810 210 112 2 9 215 10 216 8.86e-58 182
MS.gene066058.t1 AT3G04170 43.662 213 111 4 11 217 12 221 1.52e-51 166
MS.gene066058.t1 AT3G04180 43.069 202 105 4 17 211 20 218 2.85e-50 163
MS.gene066058.t1 AT5G39160 40.000 210 102 2 9 215 10 198 3.89e-50 162
MS.gene066058.t1 AT5G39190 40.000 210 102 2 9 215 10 198 6.21e-50 161
MS.gene066058.t1 AT3G04150 41.063 207 116 3 11 211 12 218 7.07e-50 162
MS.gene066058.t1 AT3G04190 42.211 199 111 2 17 211 20 218 4.10e-49 160
MS.gene066058.t1 AT3G04150 39.091 220 115 3 11 211 12 231 1.57e-48 159
MS.gene066058.t1 AT3G10080 40.887 203 112 4 19 216 22 221 3.72e-47 155
MS.gene066058.t1 AT3G10080 40.887 203 112 4 19 216 93 292 1.86e-46 155
MS.gene066058.t1 AT5G38910 40.976 205 84 2 11 213 12 181 2.01e-42 142
MS.gene066058.t1 AT1G74820 36.493 211 127 2 8 213 16 224 4.30e-42 142
MS.gene066058.t1 AT1G72610 36.559 186 116 1 26 211 18 201 4.73e-39 134
MS.gene066058.t1 AT1G10460 38.235 204 109 5 22 214 18 215 1.74e-38 132
MS.gene066058.t1 AT5G61750 39.535 172 102 1 11 180 7 178 1.28e-37 130
MS.gene066058.t1 AT5G20630 35.784 204 125 2 8 211 7 204 1.91e-36 127
MS.gene066058.t1 AT5G38950 39.744 78 45 1 143 218 2 79 1.18e-12 62.4

Find 42 sgRNAs with CRISPR-Local

Find 75 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATAAATTAAGTCTTCTT+AGG 0.231546 1.2:-58583423 None:intergenic
TGATAATGCACCAACCCTTT+TGG 0.273835 1.2:-58583222 None:intergenic
CAACAACACTGTAGGATCTT+TGG 0.279663 1.2:+58582981 MS.gene066058:CDS
TAATCATGTCACCAACAAAT+TGG 0.290827 1.2:+58582177 None:intergenic
CAAAGGTCTTGAAGTGTATC+AGG 0.335291 1.2:-58582251 None:intergenic
GTGCATTATCAGAAGAATAA+TGG 0.349181 1.2:+58583234 MS.gene066058:CDS
TGCATTATCAGAAGAATAAT+GGG 0.349638 1.2:+58583235 MS.gene066058:CDS
CTTTCAGATTGATACTAAAC+AGG 0.392793 1.2:+58583374 MS.gene066058:CDS
TATGTAGGTGTTAAGGTGAA+TGG 0.396371 1.2:+58582883 MS.gene066058:intron
ACAGTGTTGTTGACAACCTT+AGG 0.398287 1.2:-58582970 None:intergenic
CACGAGGGTGTGTGTGTGGC+GGG 0.405545 1.2:-58583092 None:intergenic
GAAATCTTTGTGTTCCCAAA+AGG 0.405554 1.2:+58583207 MS.gene066058:CDS
TCCTGATGATGTTCTTGCTC+AGG 0.416572 1.2:+58583350 MS.gene066058:CDS
TGTGTAGCTCTTCCATCATC+AGG 0.427639 1.2:+58582272 MS.gene066058:CDS
TGTGGCGGGTTAAGACCATT+AGG 0.441756 1.2:-58583078 None:intergenic
AGAATAGACTACAAACCTAA+TGG 0.465489 1.2:+58583063 MS.gene066058:CDS
GCCTGAGCAAGAACATCATC+AGG 0.472294 1.2:-58583351 None:intergenic
CAGTGTTGTTGACAACCTTA+GGG 0.477171 1.2:-58582969 None:intergenic
AAATCTTTGTGTTCCCAAAA+GGG 0.493371 1.2:+58583208 MS.gene066058:CDS
CTTTGTGTTCCCAAAAGGGT+TGG 0.498869 1.2:+58583212 MS.gene066058:CDS
CATTATACATTACCTGATGA+TGG 0.506437 1.2:-58582284 None:intergenic
ATTCCTGGACTCAACACATT+GGG 0.515180 1.2:+58583027 MS.gene066058:CDS
GCACGAGGGTGTGTGTGTGG+CGG 0.527458 1.2:-58583093 None:intergenic
ACTCCCAATGTGTTGAGTCC+AGG 0.538199 1.2:-58583030 None:intergenic
TATGTCTTATGTAGGTGTTA+AGG 0.563003 1.2:+58582876 MS.gene066058:intron
TTGGAAGGTGAATTAGATGT+AGG 0.564991 1.2:+58583135 MS.gene066058:CDS
AATTCCTGGACTCAACACAT+TGG 0.570200 1.2:+58583026 MS.gene066058:CDS
TGTATCAGGATCAGAAGCGA+AGG 0.579047 1.2:-58582237 None:intergenic
AGAAGCGAAGGTAGATGAGA+TGG 0.579500 1.2:-58582225 None:intergenic
TGATGGTATAGCAAACCCTA+AGG 0.582336 1.2:+58582954 MS.gene066058:CDS
GAAACAATTGACAAAGTACC+AGG 0.582389 1.2:-58583300 None:intergenic
GGTGAATGGATTTGCATGCA+AGG 0.593738 1.2:+58582897 MS.gene066058:CDS
CTGTTTAGTATCAATCTGAA+AGG 0.609012 1.2:-58583373 None:intergenic
TCTGTTTGACTCTACACCAA+CGG 0.619003 1.2:+58583326 MS.gene066058:CDS
GTGGCACGAGGGTGTGTGTG+TGG 0.621879 1.2:-58583096 None:intergenic
AGAACATCATCAGGAACCGT+TGG 0.626429 1.2:-58583342 None:intergenic
AAGGTTGTCAACAACACTGT+AGG 0.630939 1.2:+58582973 MS.gene066058:CDS
AAAACAACCTCAGTGGCACG+AGG 0.637231 1.2:-58583108 None:intergenic
CACACACCCTCGTGCCACTG+AGG 0.678341 1.2:+58583101 MS.gene066058:CDS
AAACAACCTCAGTGGCACGA+GGG 0.703640 1.2:-58583107 None:intergenic
GCATTATCAGAAGAATAATG+GGG 0.712368 1.2:+58583236 MS.gene066058:CDS
ATGATGGAAGAGCTACACAA+AGG 0.722041 1.2:-58582268 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAGTTATGTCTAATATTA+TGG + chr1.2:58582853-58582872 MS.gene066058:intron 15.0%
!! TTATATAAAAATAGTTGAAC+TGG + chr1.2:58582766-58582785 MS.gene066058:intron 15.0%
!!! TACTACTATTATCATTTTTT+TGG + chr1.2:58582352-58582371 MS.gene066058:intron 15.0%
!! AAAAAAATTGTCCAATTTGT+TGG - chr1.2:58582191-58582210 None:intergenic 20.0%
!! ATTTCTAAGTCCATAAAAAA+AGG + chr1.2:58583183-58583202 MS.gene066058:CDS 20.0%
!!! AAAGATTTCACCTTTTTTTA+TGG - chr1.2:58583196-58583215 None:intergenic 20.0%
! ATTTGAAGGAGTTAAAGAAT+CGG - chr1.2:58582651-58582670 None:intergenic 25.0%
! GATTAAATTGTTTATGCAAC+TGG + chr1.2:58582809-58582828 MS.gene066058:intron 25.0%
! TATTATGGTATGTCTTATGT+AGG + chr1.2:58582868-58582887 MS.gene066058:intron 25.0%
! TGCATTATCAGAAGAATAAT+GGG + chr1.2:58583235-58583254 MS.gene066058:CDS 25.0%
! TGTAACTATTGCTAAAATTG+TGG + chr1.2:58582459-58582478 MS.gene066058:intron 25.0%
! TGTATAATGCTTCATGTATA+TGG + chr1.2:58582298-58582317 MS.gene066058:intron 25.0%
!!! AAGTTGTTTTCATAATCACA+CGG - chr1.2:58582741-58582760 None:intergenic 25.0%
AAATCTTTGTGTTCCCAAAA+GGG + chr1.2:58583208-58583227 MS.gene066058:CDS 30.0%
AACTATTGCTAAAATTGTGG+AGG + chr1.2:58582462-58582481 MS.gene066058:intron 30.0%
AGAATAGACTACAAACCTAA+TGG + chr1.2:58583063-58583082 MS.gene066058:CDS 30.0%
CATTATACATTACCTGATGA+TGG - chr1.2:58582287-58582306 None:intergenic 30.0%
CTCTAACTTAGTGTTATGTT+TGG + chr1.2:58582378-58582397 MS.gene066058:intron 30.0%
CTGTTTAGTATCAATCTGAA+AGG - chr1.2:58583376-58583395 None:intergenic 30.0%
CTTTCAGATTGATACTAAAC+AGG + chr1.2:58583374-58583393 MS.gene066058:CDS 30.0%
GCATTATCAGAAGAATAATG+GGG + chr1.2:58583236-58583255 MS.gene066058:CDS 30.0%
GTGCATTATCAGAAGAATAA+TGG + chr1.2:58583234-58583253 MS.gene066058:CDS 30.0%
TATGTCTTATGTAGGTGTTA+AGG + chr1.2:58582876-58582895 MS.gene066058:intron 30.0%
! CAATGAGTTTTGCAAAATCA+AGG + chr1.2:58582406-58582425 MS.gene066058:intron 30.0%
!! AGTTGTTTTCATAATCACAC+GGG - chr1.2:58582740-58582759 None:intergenic 30.0%
!!! TCCAGGAATTTTTTCAACAT+TGG - chr1.2:58583016-58583035 None:intergenic 30.0%
ATTCCCTTATGTACTCTTGA+GGG + chr1.2:58582540-58582559 MS.gene066058:intron 35.0%
GAAATCTTTGTGTTCCCAAA+AGG + chr1.2:58583207-58583226 MS.gene066058:CDS 35.0%
GCCAATGTTGAAAAAATTCC+TGG + chr1.2:58583012-58583031 MS.gene066058:CDS 35.0%
TATAGAGTGCATAGTTCACT+CGG - chr1.2:58582687-58582706 None:intergenic 35.0%
TATGTAGGTGTTAAGGTGAA+TGG + chr1.2:58582883-58582902 MS.gene066058:intron 35.0%
TTGGAAGGTGAATTAGATGT+AGG + chr1.2:58583135-58583154 MS.gene066058:CDS 35.0%
! ATGAGAGTGCAAAAAACTCA+AGG - chr1.2:58582509-58582528 None:intergenic 35.0%
! GAAACAATTGACAAAGTACC+AGG - chr1.2:58583303-58583322 None:intergenic 35.0%
!!! GCAGCTGATTTTTTCTTTGA+TGG + chr1.2:58582937-58582956 MS.gene066058:CDS 35.0%
AAGGTTGTCAACAACACTGT+AGG + chr1.2:58582973-58582992 MS.gene066058:CDS 40.0%
AATTCCTGGACTCAACACAT+TGG + chr1.2:58583026-58583045 MS.gene066058:CDS 40.0%
ATTCCTGGACTCAACACATT+GGG + chr1.2:58583027-58583046 MS.gene066058:CDS 40.0%
CAAAGGTCTTGAAGTGTATC+AGG - chr1.2:58582254-58582273 None:intergenic 40.0%
CAACAACACTGTAGGATCTT+TGG + chr1.2:58582981-58583000 MS.gene066058:CDS 40.0%
CAACACAAAAACAACCTCAG+TGG - chr1.2:58583118-58583137 None:intergenic 40.0%
GATTCCCTTATGTACTCTTG+AGG + chr1.2:58582539-58582558 MS.gene066058:intron 40.0%
GTTGAGCTAAGGGAATTTGA+AGG - chr1.2:58582665-58582684 None:intergenic 40.0%
TCTGTTTGACTCTACACCAA+CGG + chr1.2:58583326-58583345 MS.gene066058:CDS 40.0%
TGATGGTATAGCAAACCCTA+AGG + chr1.2:58582954-58582973 MS.gene066058:CDS 40.0%
! ACAGTGTTGTTGACAACCTT+AGG - chr1.2:58582973-58582992 None:intergenic 40.0%
! AGACCCTCAAGAGTACATAA+GGG - chr1.2:58582546-58582565 None:intergenic 40.0%
! ATGATGGAAGAGCTACACAA+AGG - chr1.2:58582271-58582290 None:intergenic 40.0%
! CAGTGTTGTTGACAACCTTA+GGG - chr1.2:58582972-58582991 None:intergenic 40.0%
! GATAATGCACCAACCCTTTT+GGG - chr1.2:58583224-58583243 None:intergenic 40.0%
! GCTTTTAACAGTCAACTTCC+TGG + chr1.2:58583282-58583301 MS.gene066058:CDS 40.0%
!! TGATAATGCACCAACCCTTT+TGG - chr1.2:58583225-58583244 None:intergenic 40.0%
!!! CACTGAGGTTGTTTTTGTGT+TGG + chr1.2:58583116-58583135 MS.gene066058:CDS 40.0%
!!! GAGGTTGTTTTTGTGTTGGA+AGG + chr1.2:58583120-58583139 MS.gene066058:CDS 40.0%
AGAACATCATCAGGAACCGT+TGG - chr1.2:58583345-58583364 None:intergenic 45.0%
AGAAGCGAAGGTAGATGAGA+TGG - chr1.2:58582228-58582247 None:intergenic 45.0%
AGTTCACTCGGTTGAGCTAA+GGG - chr1.2:58582675-58582694 None:intergenic 45.0%
CTTTGTGTTCCCAAAAGGGT+TGG + chr1.2:58583212-58583231 MS.gene066058:CDS 45.0%
TAGTTCACTCGGTTGAGCTA+AGG - chr1.2:58582676-58582695 None:intergenic 45.0%
TCTTGAGGGTCTGTTTGGAT+TGG + chr1.2:58582554-58582573 MS.gene066058:intron 45.0%
TGTACTCTTGAGGGTCTGTT+TGG + chr1.2:58582549-58582568 MS.gene066058:intron 45.0%
TGTATCAGGATCAGAAGCGA+AGG - chr1.2:58582240-58582259 None:intergenic 45.0%
TGTGTAGCTCTTCCATCATC+AGG + chr1.2:58582272-58582291 MS.gene066058:CDS 45.0%
! CAGACCCTCAAGAGTACATA+AGG - chr1.2:58582547-58582566 None:intergenic 45.0%
! GGTGAATGGATTTGCATGCA+AGG + chr1.2:58582897-58582916 MS.gene066058:CDS 45.0%
! TCCTGATGATGTTCTTGCTC+AGG + chr1.2:58583350-58583369 MS.gene066058:CDS 45.0%
AAAACAACCTCAGTGGCACG+AGG - chr1.2:58583111-58583130 None:intergenic 50.0%
AAACAACCTCAGTGGCACGA+GGG - chr1.2:58583110-58583129 None:intergenic 50.0%
ACTCCCAATGTGTTGAGTCC+AGG - chr1.2:58583033-58583052 None:intergenic 50.0%
GCCTGAGCAAGAACATCATC+AGG - chr1.2:58583354-58583373 None:intergenic 50.0%
!! TGTGGCGGGTTAAGACCATT+AGG - chr1.2:58583081-58583100 None:intergenic 50.0%
! CACACACCCTCGTGCCACTG+AGG + chr1.2:58583101-58583120 MS.gene066058:CDS 65.0%
! CACGAGGGTGTGTGTGTGGC+GGG - chr1.2:58583095-58583114 None:intergenic 65.0%
! GCACGAGGGTGTGTGTGTGG+CGG - chr1.2:58583096-58583115 None:intergenic 65.0%
! GTGGCACGAGGGTGTGTGTG+TGG - chr1.2:58583099-58583118 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 58582182 58583437 58582182 ID=MS.gene066058
chr1.2 mRNA 58582182 58583437 58582182 ID=MS.gene066058.t1;Parent=MS.gene066058
chr1.2 exon 58582182 58582293 58582182 ID=MS.gene066058.t1.exon1;Parent=MS.gene066058.t1
chr1.2 CDS 58582182 58582293 58582182 ID=cds.MS.gene066058.t1;Parent=MS.gene066058.t1
chr1.2 exon 58582890 58583437 58582890 ID=MS.gene066058.t1.exon2;Parent=MS.gene066058.t1
chr1.2 CDS 58582890 58583437 58582890 ID=cds.MS.gene066058.t1;Parent=MS.gene066058.t1
Gene Sequence

>MS.gene066058

ATGTCACCAACAAATTGGACAATTTTTTTCATTTTGTGCTGTGCCATCTCATCTACCTTCGCTTCTGATCCTGATACACTTCAAGACCTTTGTGTAGCTCTTCCATCATCAGGTAATGTATAATGCTTCATGTATATGGTTTTATCATTTTTTTTAGCATCAAAACATTGTACTACTATTATCATTTTTTTGGCATCTCTAACTTAGTGTTATGTTTGGATGATCAATGAGTTTTGCAAAATCAAGGTGACACTGTGAGTTTGTTGAAACTTCAAAGTGTAACTATTGCTAAAATTGTGGAGGTTCATCGTTATGTCGTTTTCACCTTGAGTTTTTTGCACTCTCATTTGCTAATTTGATTCCCTTATGTACTCTTGAGGGTCTGTTTGGATTGGTTTTTTTAATATGTTAATATTAGTATGCTAGTTGTTATGTTAGTATATTTTCTTTCACTAAGATTTGAACTCCGATTCTTTAACTCCTTCAAATTCCCTTAGCTCAACCGAGTGAACTATGCACTCTATAAGTAAATTTCAGCTCATTGCTATAAGCTCTCCCGTGTGATTATGAAAACAACTTATAACTTATATAAAAATAGTTGAACTGGATTGTATACTATAAACATTTGATTAAATTGTTTATGCAACTGGAACTTATTGTAATAGAAGTAGTAAAGTTATGTCTAATATTATGGTATGTCTTATGTAGGTGTTAAGGTGAATGGATTTGCATGCAAGGCAGAGTCAAATGTAACAGCAGCTGATTTTTTCTTTGATGGTATAGCAAACCCTAAGGTTGTCAACAACACTGTAGGATCTTTGGTTACTGCAGCCAATGTTGAAAAAATTCCTGGACTCAACACATTGGGAGTATCTTTATCAAGAATAGACTACAAACCTAATGGTCTTAACCCGCCACACACACACCCTCGTGCCACTGAGGTTGTTTTTGTGTTGGAAGGTGAATTAGATGTAGGTTTTATCACTACATCAAACAAACTCATTTCTAAGTCCATAAAAAAAGGTGAAATCTTTGTGTTCCCAAAAGGGTTGGTGCATTATCAGAAGAATAATGGGGATAAAGCTGCTTCTGTGATTTCTGCTTTTAACAGTCAACTTCCTGGTACTTTGTCAATTGTTTCATCTCTGTTTGACTCTACACCAACGGTTCCTGATGATGTTCTTGCTCAGGCCTTTCAGATTGATACTAAACAGGTTGATGAAATAAAGACAAAGATTGCTCCTAAGAAGACTTAA
Protein sequence

>MS.gene066058.t1

MSPTNWTIFFILCCAISSTFASDPDTLQDLCVALPSSGVKVNGFACKAESNVTAADFFFDGIANPKVVNNTVGSLVTAANVEKIPGLNTLGVSLSRIDYKPNGLNPPHTHPRATEVVFVLEGELDVGFITTSNKLISKSIKKGEIFVFPKGLVHYQKNNGDKAASVISAFNSQLPGTLSIVSSLFDSTPTVPDDVLAQAFQIDTKQVDEIKTKIAPKKT